locus-tag class description SSUBM407_0001 PF08299 Bacterial dnaA protein helix-turn-helix SSUBM407_0001 PF00308 Bacterial dnaA protein SSUBM407_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain SSUBM407_0002 PF02767 DNA polymerase III beta subunit, central domain SSUBM407_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain SSUBM407_0005 PF01381 Helix-turn-helix SSUBM407_0006 PF06071 Protein of unknown function (DUF933) SSUBM407_0006 PF01926 50S ribosome-binding GTPase SSUBM407_0007 PF01195 Peptidyl-tRNA hydrolase SSUBM407_0008 PF17757 UvrB interaction domain SSUBM407_0008 PF03461 TRCF domain SSUBM407_0008 PF00271 Helicase conserved C-terminal domain SSUBM407_0008 PF02559 CarD-like/TRCF domain SSUBM407_0008 PF00270 DEAD/DEAH box helicase SSUBM407_0009 PF01479 S4 domain SSUBM407_0013 PF01171 PP-loop family SSUBM407_0014 PF00156 Phosphoribosyl transferase domain SSUBM407_0015 PF00004 ATPase family associated with various cellular activities (AAA) SSUBM407_0015 PF01434 Peptidase family M41 SSUBM407_0015 PF06480 FtsH Extracellular SSUBM407_0015 PF17862 AAA+ lid domain SSUBM407_0017 PF04085 rod shape-determining protein MreC SSUBM407_0020 PF14572 Phosphoribosyl synthetase-associated domain SSUBM407_0020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSUBM407_0021 PF00155 Aminotransferase class I and II SSUBM407_0022 PF11967 Recombination protein O N terminal SSUBM407_0022 PF02565 Recombination protein O C terminal SSUBM407_0023 PF02504 Fatty acid synthesis protein SSUBM407_0024 PF00550 Phosphopantetheine attachment site SSUBM407_0025 PF01259 SAICAR synthetase SSUBM407_0026 PF00586 AIR synthase related protein, N-terminal domain SSUBM407_0026 PF02769 AIR synthase related protein, C-terminal domain SSUBM407_0026 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SSUBM407_0027 PF00156 Phosphoribosyl transferase domain SSUBM407_0027 PF13537 Glutamine amidotransferase domain SSUBM407_0028 PF02769 AIR synthase related protein, C-terminal domain SSUBM407_0028 PF00586 AIR synthase related protein, N-terminal domain SSUBM407_0029 PF00551 Formyl transferase SSUBM407_0030 PF01808 AICARFT/IMPCHase bienzyme SSUBM407_0030 PF02142 MGS-like domain SSUBM407_0031 PF02844 Phosphoribosylglycinamide synthetase, N domain SSUBM407_0031 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSUBM407_0031 PF02843 Phosphoribosylglycinamide synthetase, C domain SSUBM407_0032 PF00731 AIR carboxylase SSUBM407_0033 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SSUBM407_0033 PF02222 ATP-grasp domain SSUBM407_0036 PF10397 Adenylosuccinate lyase C-terminus SSUBM407_0036 PF00206 Lyase SSUBM407_0040 PF00005 ABC transporter SSUBM407_0042 PF00005 ABC transporter SSUBM407_0042 PF00664 ABC transporter transmembrane region SSUBM407_0043 PF17864 RuvB AAA lid domain SSUBM407_0043 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSUBM407_0043 PF05491 RuvB C-terminal winged helix domain SSUBM407_0045 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_0050 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_0050 PF08245 Mur ligase middle domain SSUBM407_0053 PF01119 DNA mismatch repair protein, C-terminal domain SSUBM407_0053 PF08676 MutL C terminal dimerisation domain SSUBM407_0054 PF07499 RuvA, C-terminal domain SSUBM407_0054 PF01330 RuvA N terminal domain SSUBM407_0056 PF00958 GMP synthase C terminal domain SSUBM407_0056 PF13673 Acetyltransferase (GNAT) domain SSUBM407_0056 PF13302 Acetyltransferase (GNAT) domain SSUBM407_0056 PF03352 Methyladenine glycosylase SSUBM407_0056 PF00117 Glutamine amidotransferase class-I SSUBM407_0057 PF02464 Competence-damaged protein SSUBM407_0057 PF00994 Probable molybdopterin binding domain SSUBM407_0057 PF18146 Damage-inducible protein CinA KH domain SSUBM407_0058 PF00154 recA bacterial DNA recombination protein SSUBM407_0059 PF03960 ArsC family SSUBM407_0060 PF06135 IreB regulatory phosphoprotein SSUBM407_0061 PF03652 Holliday junction resolvase SSUBM407_0062 PF06949 Protein of unknown function (DUF1292) SSUBM407_0065 PF00338 Ribosomal protein S10p/S20e SSUBM407_0066 PF00297 Ribosomal protein L3 SSUBM407_0067 PF00573 Ribosomal protein L4/L1 family SSUBM407_0068 PF00276 Ribosomal protein L23 SSUBM407_0069 PF03947 Ribosomal Proteins L2, C-terminal domain SSUBM407_0069 PF00181 Ribosomal Proteins L2, RNA binding domain SSUBM407_0070 PF00203 Ribosomal protein S19 SSUBM407_0071 PF00237 Ribosomal protein L22p/L17e SSUBM407_0072 PF07650 KH domain SSUBM407_0072 PF00189 Ribosomal protein S3, C-terminal domain SSUBM407_0073 PF00252 Ribosomal protein L16p/L10e SSUBM407_0074 PF00831 Ribosomal L29 protein SSUBM407_0075 PF00366 Ribosomal protein S17 SSUBM407_0076 PF00238 Ribosomal protein L14p/L23e SSUBM407_0077 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SSUBM407_0077 PF00467 KOW motif SSUBM407_0078 PF00673 ribosomal L5P family C-terminus SSUBM407_0078 PF00281 Ribosomal protein L5 SSUBM407_0079 PF00253 Ribosomal protein S14p/S29e SSUBM407_0081 PF00410 Ribosomal protein S8 SSUBM407_0084 PF00347 Ribosomal protein L6 SSUBM407_0085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SSUBM407_0086 PF00333 Ribosomal protein S5, N-terminal domain SSUBM407_0086 PF03719 Ribosomal protein S5, C-terminal domain SSUBM407_0087 PF00327 Ribosomal protein L30p/L7e SSUBM407_0088 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SSUBM407_0089 PF00344 SecY translocase SSUBM407_0091 PF01176 Translation initiation factor 1A / IF-1 SSUBM407_0092 PF00444 Ribosomal protein L36 SSUBM407_0093 PF00416 Ribosomal protein S13/S18 SSUBM407_0094 PF00411 Ribosomal protein S11 SSUBM407_0095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SSUBM407_0095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SSUBM407_0095 PF01000 RNA polymerase Rpb3/RpoA insert domain SSUBM407_0096 PF01196 Ribosomal protein L17 SSUBM407_0097 PF00589 Phage integrase family SSUBM407_0097 PF14659 Phage integrase, N-terminal SAM-like domain SSUBM407_0099 PF18106 Rolling Circle replication initiation protein N-terminal domain SSUBM407_0099 PF02486 Replication initiation factor SSUBM407_0107 PF01047 MarR family SSUBM407_0108 PF00005 ABC transporter SSUBM407_0109 PF00950 ABC 3 transport family SSUBM407_0110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SSUBM407_0110 PF01297 Zinc-uptake complex component A periplasmic SSUBM407_0111 PF03965 Penicillinase repressor SSUBM407_0115 PF00579 tRNA synthetases class I (W and Y) SSUBM407_0115 PF01479 S4 domain SSUBM407_0116 PF00912 Transglycosylase SSUBM407_0116 PF00905 Penicillin binding protein transpeptidase domain SSUBM407_0119 PF00562 RNA polymerase Rpb2, domain 6 SSUBM407_0119 PF04561 RNA polymerase Rpb2, domain 2 SSUBM407_0119 PF04563 RNA polymerase beta subunit SSUBM407_0119 PF10385 RNA polymerase beta subunit external 1 domain SSUBM407_0119 PF04560 RNA polymerase Rpb2, domain 7 SSUBM407_0119 PF04565 RNA polymerase Rpb2, domain 3 SSUBM407_0120 PF04998 RNA polymerase Rpb1, domain 5 SSUBM407_0120 PF05000 RNA polymerase Rpb1, domain 4 SSUBM407_0120 PF04983 RNA polymerase Rpb1, domain 3 SSUBM407_0120 PF00623 RNA polymerase Rpb1, domain 2 SSUBM407_0120 PF04997 RNA polymerase Rpb1, domain 1 SSUBM407_0123 PF00437 Type II/IV secretion system protein SSUBM407_0124 PF00482 Type II secretion system (T2SS), protein F SSUBM407_0125 PF07963 Prokaryotic N-terminal methylation motif SSUBM407_0131 PF00871 Acetokinase family SSUBM407_0132 PF07155 ECF-type riboflavin transporter, S component SSUBM407_0133 PF08245 Mur ligase middle domain SSUBM407_0133 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_0134 PF05343 M42 glutamyl aminopeptidase SSUBM407_0136 PF00085 Thioredoxin SSUBM407_0138 PF14794 Domain of unknown function (DUF4479) SSUBM407_0138 PF01588 Putative tRNA binding domain SSUBM407_0140 PF00436 Single-strand binding protein family SSUBM407_0142 PF00166 Chaperonin 10 Kd subunit SSUBM407_0143 PF00118 TCP-1/cpn60 chaperonin family SSUBM407_0144 PF00164 Ribosomal protein S12/S23 SSUBM407_0145 PF00177 Ribosomal protein S7p/S5e SSUBM407_0146 PF14492 Elongation Factor G, domain II SSUBM407_0146 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0146 PF03144 Elongation factor Tu domain 2 SSUBM407_0146 PF03764 Elongation factor G, domain IV SSUBM407_0146 PF00679 Elongation factor G C-terminus SSUBM407_0147 PF01431 Peptidase family M13 SSUBM407_0147 PF05649 Peptidase family M13 SSUBM407_0148 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SSUBM407_0148 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSUBM407_0149 PF00162 Phosphoglycerate kinase SSUBM407_0151 PF13411 MerR HTH family regulatory protein SSUBM407_0152 PF03951 Glutamine synthetase, beta-Grasp domain SSUBM407_0152 PF00120 Glutamine synthetase, catalytic domain SSUBM407_0153 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSUBM407_0153 PF17770 Ribonuclease J C-terminal domain SSUBM407_0153 PF00753 Metallo-beta-lactamase superfamily SSUBM407_0154 PF07288 Protein of unknown function (DUF1447) SSUBM407_0155 PF00814 Glycoprotease family SSUBM407_0157 PF00814 Glycoprotease family SSUBM407_0158 PF02311 AraC-like ligand binding domain SSUBM407_0158 PF12833 Helix-turn-helix domain SSUBM407_0159 PF01547 Bacterial extracellular solute-binding protein SSUBM407_0160 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0161 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0162 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSUBM407_0162 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSUBM407_0165 PF03601 Conserved hypothetical protein 698 SSUBM407_0168 PF00005 ABC transporter SSUBM407_0168 PF13732 Domain of unknown function (DUF4162) SSUBM407_0170 PF00232 Glycosyl hydrolase family 1 SSUBM407_0171 PF08279 HTH domain SSUBM407_0171 PF04394 Protein of unknown function, DUF536 SSUBM407_0172 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUBM407_0173 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_0174 PF03611 PTS system sugar-specific permease component SSUBM407_0175 PF00456 Transketolase, thiamine diphosphate binding domain SSUBM407_0176 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SSUBM407_0176 PF02779 Transketolase, pyrimidine binding domain SSUBM407_0176 PF02780 Transketolase, C-terminal domain SSUBM407_0177 PF03009 Glycerophosphoryl diester phosphodiesterase family SSUBM407_0178 PF02575 YbaB/EbfC DNA-binding family SSUBM407_0179 PF01380 SIS domain SSUBM407_0181 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SSUBM407_0181 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSUBM407_0181 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSUBM407_0184 PF01228 Glycine radical SSUBM407_0184 PF02901 Pyruvate formate lyase-like SSUBM407_0185 PF00817 impB/mucB/samB family SSUBM407_0185 PF11799 impB/mucB/samB family C-terminal domain SSUBM407_0185 PF11798 IMS family HHH motif SSUBM407_0187 PF13460 NAD(P)H-binding SSUBM407_0188 PF00294 pfkB family carbohydrate kinase SSUBM407_0191 PF00480 ROK family SSUBM407_0192 PF02378 Phosphotransferase system, EIIC SSUBM407_0196 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0197 PF00005 ABC transporter SSUBM407_0199 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSUBM407_0201 PF08534 Redoxin SSUBM407_0202 PF14490 Helix-hairpin-helix containing domain SSUBM407_0202 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SSUBM407_0202 PF13538 UvrD-like helicase C-terminal domain SSUBM407_0203 PF10502 Signal peptidase, peptidase S26 SSUBM407_0204 PF11858 Domain of unknown function (DUF3378) SSUBM407_0204 PF01351 Ribonuclease HII SSUBM407_0205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SSUBM407_0205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSUBM407_0207 PF00128 Alpha amylase, catalytic domain SSUBM407_0207 PF16657 Maltogenic Amylase, C-terminal domain SSUBM407_0208 PF02378 Phosphotransferase system, EIIC SSUBM407_0208 PF00367 phosphotransferase system, EIIB SSUBM407_0209 PF07702 UTRA domain SSUBM407_0209 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_0212 PF00488 MutS domain V SSUBM407_0212 PF01713 Smr domain SSUBM407_0214 PF00085 Thioredoxin SSUBM407_0215 PF00501 AMP-binding enzyme SSUBM407_0215 PF13193 AMP-binding enzyme C-terminal domain SSUBM407_0216 PF01625 Peptide methionine sulfoxide reductase SSUBM407_0216 PF01641 SelR domain SSUBM407_0220 PF00005 ABC transporter SSUBM407_0221 PF01235 Sodium:alanine symporter family SSUBM407_0222 PF00924 Mechanosensitive ion channel SSUBM407_0225 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SSUBM407_0225 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSUBM407_0226 PF01180 Dihydroorotate dehydrogenase SSUBM407_0227 PF09587 Bacterial capsule synthesis protein PGA_cap SSUBM407_0231 PF00005 ABC transporter SSUBM407_0232 PF00440 Bacterial regulatory proteins, tetR family SSUBM407_0237 PF03788 LrgA family SSUBM407_0238 PF04172 LrgB-like family SSUBM407_0239 PF01226 Formate/nitrite transporter SSUBM407_0240 PF00230 Major intrinsic protein SSUBM407_0241 PF05872 Bacterial protein of unknown function (DUF853) SSUBM407_0242 PF00293 NUDIX domain SSUBM407_0248 PF00471 Ribosomal protein L33 SSUBM407_0249 PF01783 Ribosomal L32p protein family SSUBM407_0250 PF03129 Anticodon binding domain SSUBM407_0250 PF13393 Histidyl-tRNA synthetase SSUBM407_0251 PF08240 Alcohol dehydrogenase GroES-like domain SSUBM407_0251 PF00107 Zinc-binding dehydrogenase SSUBM407_0252 PF00171 Aldehyde dehydrogenase family SSUBM407_0252 PF00465 Iron-containing alcohol dehydrogenase SSUBM407_0253 PF14821 Threonine synthase N terminus SSUBM407_0253 PF00291 Pyridoxal-phosphate dependent enzyme SSUBM407_0255 PF00005 ABC transporter SSUBM407_0255 PF00664 ABC transporter transmembrane region SSUBM407_0258 PF00005 ABC transporter SSUBM407_0259 PF01554 MatE SSUBM407_0260 PF08544 GHMP kinases C terminal SSUBM407_0260 PF10509 Galactokinase galactose-binding signature SSUBM407_0260 PF00288 GHMP kinases N terminal domain SSUBM407_0262 PF08544 GHMP kinases C terminal SSUBM407_0262 PF00288 GHMP kinases N terminal domain SSUBM407_0263 PF01070 FMN-dependent dehydrogenase SSUBM407_0264 PF00005 ABC transporter SSUBM407_0264 PF00664 ABC transporter transmembrane region SSUBM407_0265 PF00005 ABC transporter SSUBM407_0265 PF00664 ABC transporter transmembrane region SSUBM407_0267 PF05167 Uncharacterised ACR (DUF711) SSUBM407_0268 PF00300 Histidine phosphatase superfamily (branch 1) SSUBM407_0269 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SSUBM407_0269 PF01628 HrcA protein C terminal domain SSUBM407_0270 PF01025 GrpE SSUBM407_0271 PF00012 Hsp70 protein SSUBM407_0272 PF00684 DnaJ central domain SSUBM407_0272 PF01556 DnaJ C terminal domain SSUBM407_0272 PF00226 DnaJ domain SSUBM407_0273 PF03099 Biotin/lipoate A/B protein ligase family SSUBM407_0274 PF01425 Amidase SSUBM407_0275 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_0276 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0277 PF13443 Cro/C1-type HTH DNA-binding domain SSUBM407_0280 PF01475 Ferric uptake regulator family SSUBM407_0281 PF01416 tRNA pseudouridine synthase SSUBM407_0284 PF04260 Protein of unknown function (DUF436) SSUBM407_0289 PF12697 Alpha/beta hydrolase family SSUBM407_0290 PF00106 short chain dehydrogenase SSUBM407_0291 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_0291 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SSUBM407_0292 PF02082 Transcriptional regulator SSUBM407_0296 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SSUBM407_0296 PF05697 Bacterial trigger factor protein (TF) SSUBM407_0296 PF05698 Bacterial trigger factor protein (TF) C-terminus SSUBM407_0300 PF05066 HB1, ASXL, restriction endonuclease HTH domain SSUBM407_0301 PF06418 CTP synthase N-terminus SSUBM407_0301 PF00117 Glutamine amidotransferase class-I SSUBM407_0302 PF01116 Fructose-bisphosphate aldolase class-II SSUBM407_0303 PF00830 Ribosomal L28 family SSUBM407_0304 PF00270 DEAD/DEAH box helicase SSUBM407_0304 PF00271 Helicase conserved C-terminal domain SSUBM407_0304 PF17191 RecG wedge domain SSUBM407_0305 PF00710 Asparaginase, N-terminal SSUBM407_0305 PF17763 Glutaminase/Asparaginase C-terminal domain SSUBM407_0307 PF00582 Universal stress protein family SSUBM407_0308 PF00155 Aminotransferase class I and II SSUBM407_0309 PF08222 CodY helix-turn-helix domain SSUBM407_0309 PF06018 CodY GAF-like domain SSUBM407_0311 PF01245 Ribosomal protein L19 SSUBM407_0313 PF02686 Glu-tRNAGln amidotransferase C subunit SSUBM407_0314 PF01425 Amidase SSUBM407_0315 PF02934 GatB/GatE catalytic domain SSUBM407_0315 PF02637 GatB domain SSUBM407_0317 PF13286 Phosphohydrolase-associated domain SSUBM407_0317 PF01966 HD domain SSUBM407_0318 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_0319 PF10509 Galactokinase galactose-binding signature SSUBM407_0319 PF08544 GHMP kinases C terminal SSUBM407_0319 PF00288 GHMP kinases N terminal domain SSUBM407_0320 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SSUBM407_0320 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SSUBM407_0321 PF00892 EamA-like transporter family SSUBM407_0322 PF03932 CutC family SSUBM407_0324 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_0325 PF01926 50S ribosome-binding GTPase SSUBM407_0326 PF01985 CRS1 / YhbY (CRM) domain SSUBM407_0327 PF01467 Cytidylyltransferase-like SSUBM407_0328 PF01966 HD domain SSUBM407_0332 PF13649 Methyltransferase domain SSUBM407_0333 PF07693 KAP family P-loop domain SSUBM407_0334 PF05636 HIGH Nucleotidyl Transferase SSUBM407_0335 PF07739 TipAS antibiotic-recognition domain SSUBM407_0335 PF13411 MerR HTH family regulatory protein SSUBM407_0336 PF00350 Dynamin family SSUBM407_0340 PF01327 Polypeptide deformylase SSUBM407_0341 PF00004 ATPase family associated with various cellular activities (AAA) SSUBM407_0341 PF07724 AAA domain (Cdc48 subfamily) SSUBM407_0341 PF17871 AAA lid domain SSUBM407_0341 PF10431 C-terminal, D2-small domain, of ClpB protein SSUBM407_0342 PF02446 4-alpha-glucanotransferase SSUBM407_0343 PF00343 Carbohydrate phosphorylase SSUBM407_0345 PF03372 Endonuclease/Exonuclease/phosphatase family SSUBM407_0346 PF00367 phosphotransferase system, EIIB SSUBM407_0346 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUBM407_0346 PF02378 Phosphotransferase system, EIIC SSUBM407_0349 PF01709 Transcriptional regulator SSUBM407_0351 PF07155 ECF-type riboflavin transporter, S component SSUBM407_0353 PF17773 UPF0176 acylphosphatase like domain SSUBM407_0353 PF12368 Rhodanase C-terminal SSUBM407_0353 PF00581 Rhodanese-like domain SSUBM407_0355 PF12558 ATP-binding cassette cobalt transporter SSUBM407_0355 PF00005 ABC transporter SSUBM407_0357 PF00313 'Cold-shock' DNA-binding domain SSUBM407_0358 PF02527 rRNA small subunit methyltransferase G SSUBM407_0359 PF00912 Transglycosylase SSUBM407_0359 PF00905 Penicillin binding protein transpeptidase domain SSUBM407_0360 PF03838 Recombination protein U SSUBM407_0361 PF06908 YspA SLOG family SSUBM407_0362 PF05103 DivIVA protein SSUBM407_0363 PF01170 Putative RNA methylase family UPF0020 SSUBM407_0363 PF02926 THUMP domain SSUBM407_0364 PF18041 MapZ extracellular domain 1 SSUBM407_0364 PF18708 MapZ extracellular C-terminal domain 2 SSUBM407_0365 PF02664 S-Ribosylhomocysteinase (LuxS) SSUBM407_0366 PF12072 Domain of unknown function (DUF3552) SSUBM407_0366 PF00013 KH domain SSUBM407_0366 PF01966 HD domain SSUBM407_0367 PF00625 Guanylate kinase SSUBM407_0368 PF01192 RNA polymerase Rpb6 SSUBM407_0369 PF18074 Primosomal protein N C-terminal domain SSUBM407_0369 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SSUBM407_0369 PF00271 Helicase conserved C-terminal domain SSUBM407_0369 PF17764 3′ DNA-binding domain (3′BD) SSUBM407_0369 PF04851 Type III restriction enzyme, res subunit SSUBM407_0370 PF02911 Formyl transferase, C-terminal domain SSUBM407_0370 PF00551 Formyl transferase SSUBM407_0371 PF01189 16S rRNA methyltransferase RsmB/F SSUBM407_0371 PF01029 NusB family SSUBM407_0373 PF03793 PASTA domain SSUBM407_0373 PF00069 Protein kinase domain SSUBM407_0375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_0375 PF07730 Histidine kinase SSUBM407_0376 PF00072 Response regulator receiver domain SSUBM407_0376 PF00196 Bacterial regulatory proteins, luxR family SSUBM407_0377 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSUBM407_0378 PF00575 S1 RNA binding domain SSUBM407_0379 PF00291 Pyridoxal-phosphate dependent enzyme SSUBM407_0380 PF01205 Uncharacterized protein family UPF0029 SSUBM407_0380 PF09186 Domain of unknown function (DUF1949) SSUBM407_0381 PF00271 Helicase conserved C-terminal domain SSUBM407_0381 PF04851 Type III restriction enzyme, res subunit SSUBM407_0383 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SSUBM407_0383 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SSUBM407_0384 PF05958 tRNA (Uracil-5-)-methyltransferase SSUBM407_0384 PF01938 TRAM domain SSUBM407_0385 PF02631 RecX family SSUBM407_0386 PF04167 Protein of unknown function (DUF402) SSUBM407_0388 PF07702 UTRA domain SSUBM407_0388 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_0389 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_0389 PF07702 UTRA domain SSUBM407_0390 PF01301 Glycosyl hydrolases family 35 SSUBM407_0391 PF03830 PTS system sorbose subfamily IIB component SSUBM407_0393 PF03613 PTS system mannose/fructose/sorbose family IID component SSUBM407_0395 PF01263 Aldose 1-epimerase SSUBM407_0400 PF00133 tRNA synthetases class I (I, L, M and V) SSUBM407_0400 PF08264 Anticodon-binding domain of tRNA SSUBM407_0400 PF10458 Valyl tRNA synthetase tRNA binding arm SSUBM407_0402 PF08264 Anticodon-binding domain of tRNA SSUBM407_0402 PF10458 Valyl tRNA synthetase tRNA binding arm SSUBM407_0402 PF00133 tRNA synthetases class I (I, L, M and V) SSUBM407_0403 PF02661 Fic/DOC family SSUBM407_0403 PF17841 BID domain of Bartonella effector protein (Bep) SSUBM407_0408 PF03590 Aspartate-ammonia ligase SSUBM407_0409 PF03144 Elongation factor Tu domain 2 SSUBM407_0409 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0409 PF14492 Elongation Factor G, domain II SSUBM407_0409 PF00679 Elongation factor G C-terminus SSUBM407_0412 PF10502 Signal peptidase, peptidase S26 SSUBM407_0417 PF08245 Mur ligase middle domain SSUBM407_0417 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_0418 PF04101 Glycosyltransferase family 28 C-terminal domain SSUBM407_0418 PF03033 Glycosyltransferase family 28 N-terminal domain SSUBM407_0419 PF08478 POTRA domain, FtsQ-type SSUBM407_0420 PF11983 Membrane-attachment and polymerisation-promoting switch SSUBM407_0420 PF02491 SHS2 domain inserted in FTSA SSUBM407_0421 PF12327 FtsZ family, C-terminal domain SSUBM407_0421 PF00091 Tubulin/FtsZ family, GTPase domain SSUBM407_0422 PF01168 Alanine racemase, N-terminal domain SSUBM407_0423 PF04472 Cell division protein SepF SSUBM407_0426 PF05103 DivIVA protein SSUBM407_0428 PF00133 tRNA synthetases class I (I, L, M and V) SSUBM407_0428 PF08264 Anticodon-binding domain of tRNA SSUBM407_0430 PF00293 NUDIX domain SSUBM407_0430 PF00300 Histidine phosphatase superfamily (branch 1) SSUBM407_0431 PF10431 C-terminal, D2-small domain, of ClpB protein SSUBM407_0431 PF00004 ATPase family associated with various cellular activities (AAA) SSUBM407_0431 PF17871 AAA lid domain SSUBM407_0431 PF07724 AAA domain (Cdc48 subfamily) SSUBM407_0432 PF08796 Protein of unknown function (DUF1797) SSUBM407_0433 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0434 PF00005 ABC transporter SSUBM407_0435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SSUBM407_0435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SSUBM407_0437 PF10502 Signal peptidase, peptidase S26 SSUBM407_0439 PF13359 DDE superfamily endonuclease SSUBM407_0439 PF13613 Helix-turn-helix of DDE superfamily endonuclease SSUBM407_0442 PF13411 MerR HTH family regulatory protein SSUBM407_0445 PF01136 Peptidase family U32 SSUBM407_0445 PF16325 Peptidase family U32 C-terminal domain SSUBM407_0448 PF02229 Transcriptional Coactivator p15 (PC4) SSUBM407_0449 PF02632 BioY family SSUBM407_0450 PF04199 Putative cyclase SSUBM407_0451 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_0451 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_0452 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SSUBM407_0453 PF00005 ABC transporter SSUBM407_0454 PF02687 FtsX-like permease family SSUBM407_0454 PF12704 MacB-like periplasmic core domain SSUBM407_0458 PF00145 C-5 cytosine-specific DNA methylase SSUBM407_0471 PF17998 Cell surface antigen I/II C2 terminal domain SSUBM407_0471 PF08363 Glucan-binding protein C SSUBM407_0471 PF18652 Adhesin P1 N-terminal domain SSUBM407_0471 PF06696 Streptococcal surface antigen repeat SSUBM407_0471 PF16364 Cell surface antigen C-terminus SSUBM407_0476 PF00589 Phage integrase family SSUBM407_0476 PF02899 Phage integrase, N-terminal SAM-like domain SSUBM407_0477 PF01820 D-ala D-ala ligase N-terminus SSUBM407_0477 PF07478 D-ala D-ala ligase C-terminus SSUBM407_0479 PF00589 Phage integrase family SSUBM407_0479 PF02920 DNA binding domain of tn916 integrase SSUBM407_0479a PF09035 Excisionase from transposon Tn916 SSUBM407_0483 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0483 PF00679 Elongation factor G C-terminus SSUBM407_0483 PF03764 Elongation factor G, domain IV SSUBM407_0483 PF14492 Elongation Factor G, domain II SSUBM407_0485 PF00877 NlpC/P60 family SSUBM407_0491 PF18106 Rolling Circle replication initiation protein N-terminal domain SSUBM407_0491 PF02486 Replication initiation factor SSUBM407_0494 PF06125 Bacterial protein of unknown function (DUF961) SSUBM407_0503 PF11799 impB/mucB/samB family C-terminal domain SSUBM407_0503 PF00817 impB/mucB/samB family SSUBM407_0503 PF11798 IMS family HHH motif SSUBM407_0504 PF01381 Helix-turn-helix SSUBM407_0504 PF00717 Peptidase S24-like SSUBM407_0508 PF03432 Relaxase/Mobilisation nuclease domain SSUBM407_0510 PF00455 DeoR C terminal sensor domain SSUBM407_0510 PF08220 DeoR-like helix-turn-helix domain SSUBM407_0511 PF00480 ROK family SSUBM407_0512 PF02502 Ribose/Galactose Isomerase SSUBM407_0513 PF02502 Ribose/Galactose Isomerase SSUBM407_0514 PF00294 pfkB family carbohydrate kinase SSUBM407_0515 PF01791 DeoC/LacD family aldolase SSUBM407_0516 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUBM407_0517 PF02378 Phosphotransferase system, EIIC SSUBM407_0517 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_0518 PF00232 Glycosyl hydrolase family 1 SSUBM407_0519 PF01263 Aldose 1-epimerase SSUBM407_0520 PF01381 Helix-turn-helix SSUBM407_0526 PF00152 tRNA synthetases class II (D, K and N) SSUBM407_0526 PF01336 OB-fold nucleic acid binding domain SSUBM407_0528 PF04073 Aminoacyl-tRNA editing domain SSUBM407_0530 PF09515 Thiamine transporter protein (Thia_YuaJ) SSUBM407_0534 PF01098 Cell cycle protein SSUBM407_0535 PF00311 Phosphoenolpyruvate carboxylase SSUBM407_0536 PF08281 Sigma-70, region 4 SSUBM407_0536 PF04542 Sigma-70 region 2 SSUBM407_0538 PF03144 Elongation factor Tu domain 2 SSUBM407_0538 PF03143 Elongation factor Tu C-terminal domain SSUBM407_0538 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0539 PF00121 Triosephosphate isomerase SSUBM407_0541 PF01966 HD domain SSUBM407_0544 PF00665 Integrase core domain SSUBM407_0544 PF13936 Helix-turn-helix domain SSUBM407_0545 PF00690 Cation transporter/ATPase, N-terminus SSUBM407_0545 PF00689 Cation transporting ATPase, C-terminus SSUBM407_0548 PF04892 VanZ like family SSUBM407_0549 PF08331 Domain of unknown function (DUF1730) SSUBM407_0551 PF00005 ABC transporter SSUBM407_0552 PF02687 FtsX-like permease family SSUBM407_0552 PF18075 FtsX extracellular domain SSUBM407_0553 PF02421 Ferrous iron transport protein B SSUBM407_0553 PF17910 FeoB cytosolic helical domain SSUBM407_0553 PF07664 Ferrous iron transport protein B C terminus SSUBM407_0553 PF07670 Nucleoside recognition SSUBM407_0555 PF00664 ABC transporter transmembrane region SSUBM407_0555 PF00005 ABC transporter SSUBM407_0556 PF00664 ABC transporter transmembrane region SSUBM407_0556 PF00005 ABC transporter SSUBM407_0557 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_0558 PF01289 Thiol-activated cytolysin SSUBM407_0558 PF17440 Thiol-activated cytolysin beta sandwich domain SSUBM407_0559 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SSUBM407_0560 PF02378 Phosphotransferase system, EIIC SSUBM407_0560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUBM407_0560 PF00367 phosphotransferase system, EIIB SSUBM407_0561 PF01380 SIS domain SSUBM407_0561 PF01418 Helix-turn-helix domain, rpiR family SSUBM407_0562 PF02130 Uncharacterized protein family UPF0054 SSUBM407_0563 PF01219 Prokaryotic diacylglycerol kinase SSUBM407_0564 PF01926 50S ribosome-binding GTPase SSUBM407_0564 PF07650 KH domain SSUBM407_0565 PF06827 Zinc finger found in FPG and IleRS SSUBM407_0565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SSUBM407_0565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SSUBM407_0566 PF01121 Dephospho-CoA kinase SSUBM407_0567 PF00083 Sugar (and other) transporter SSUBM407_0567 PF07690 Major Facilitator Superfamily SSUBM407_0568 PF00471 Ribosomal protein L33 SSUBM407_0570 PF00575 S1 RNA binding domain SSUBM407_0570 PF00773 RNB domain SSUBM407_0570 PF08206 Ribonuclease B OB domain SSUBM407_0570 PF17876 Cold shock domain SSUBM407_0571 PF01668 SmpB protein SSUBM407_0572 PF00107 Zinc-binding dehydrogenase SSUBM407_0572 PF08240 Alcohol dehydrogenase GroES-like domain SSUBM407_0573 PF03848 Tellurite resistance protein TehB SSUBM407_0573 PF09313 Domain of unknown function (DUF1971) SSUBM407_0574 PF03577 Peptidase family C69 SSUBM407_0575 PF00403 Heavy-metal-associated domain SSUBM407_0576 PF08534 Redoxin SSUBM407_0578 PF00005 ABC transporter SSUBM407_0581 PF00476 DNA polymerase family A SSUBM407_0581 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SSUBM407_0581 PF01367 5'-3' exonuclease, C-terminal SAM fold SSUBM407_0583 PF13380 CoA binding domain SSUBM407_0585 PF01702 Queuine tRNA-ribosyltransferase SSUBM407_0586 PF00557 Metallopeptidase family M24 SSUBM407_0586 PF01321 Creatinase/Prolidase N-terminal domain SSUBM407_0587 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_0588 PF12892 Spy0128-like isopeptide containing domain SSUBM407_0589 PF00534 Glycosyl transferases group 1 SSUBM407_0589 PF13439 Glycosyltransferase Family 4 SSUBM407_0590 PF13439 Glycosyltransferase Family 4 SSUBM407_0590 PF00534 Glycosyl transferases group 1 SSUBM407_0593 PF03129 Anticodon binding domain SSUBM407_0593 PF02824 TGS domain SSUBM407_0593 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSUBM407_0593 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUBM407_0594 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0595 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0596 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_0597 PF00005 ABC transporter SSUBM407_0598 PF00072 Response regulator receiver domain SSUBM407_0598 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_0599 PF13426 PAS domain SSUBM407_0599 PF00512 His Kinase A (phospho-acceptor) domain SSUBM407_0599 PF00672 HAMP domain SSUBM407_0599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_0600 PF00753 Metallo-beta-lactamase superfamily SSUBM407_0601 PF12848 ABC transporter SSUBM407_0601 PF00005 ABC transporter SSUBM407_0602 PF00005 ABC transporter SSUBM407_0603 PF00905 Penicillin binding protein transpeptidase domain SSUBM407_0603 PF03717 Penicillin-binding Protein dimerisation domain SSUBM407_0604 PF13662 Toprim domain SSUBM407_0604 PF02132 RecR protein SSUBM407_0605 PF01820 D-ala D-ala ligase N-terminus SSUBM407_0605 PF07478 D-ala D-ala ligase C-terminus SSUBM407_0607 PF01225 Mur ligase family, catalytic domain SSUBM407_0607 PF08245 Mur ligase middle domain SSUBM407_0607 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_0610 PF16658 Class II release factor RF3, C-terminal domain SSUBM407_0610 PF03144 Elongation factor Tu domain 2 SSUBM407_0610 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0611 PF01610 Transposase SSUBM407_0611 PF13683 Integrase core domain SSUBM407_0612 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSUBM407_0616 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_0617 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0618 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0620 PF08244 Glycosyl hydrolases family 32 C terminal SSUBM407_0620 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSUBM407_0621 PF09397 Ftsk gamma domain SSUBM407_0621 PF17854 FtsK alpha domain SSUBM407_0621 PF01580 FtsK/SpoIIIE family SSUBM407_0622 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSUBM407_0624 PF00298 Ribosomal protein L11, RNA binding domain SSUBM407_0624 PF03946 Ribosomal protein L11, N-terminal domain SSUBM407_0625 PF00687 Ribosomal protein L1p/L10e family SSUBM407_0627 PF02798 Glutathione S-transferase, N-terminal domain SSUBM407_0628 PF14667 Polysaccharide biosynthesis C-terminal domain SSUBM407_0628 PF01943 Polysaccharide biosynthesis protein SSUBM407_0629 PF00696 Amino acid kinase family SSUBM407_0630 PF01765 Ribosome recycling factor SSUBM407_0631 PF17783 CvfB-like winged helix domain SSUBM407_0631 PF13509 S1 domain SSUBM407_0632 PF08546 Ketopantoate reductase PanE/ApbA C terminal SSUBM407_0632 PF02558 Ketopantoate reductase PanE/ApbA SSUBM407_0634 PF06855 YozE SAM-like fold SSUBM407_0635 PF02562 PhoH-like protein SSUBM407_0638 PF01717 Cobalamin-independent synthase, Catalytic domain SSUBM407_0639 PF07690 Major Facilitator Superfamily SSUBM407_0642 PF01926 50S ribosome-binding GTPase SSUBM407_0642 PF13167 GTP-binding GTPase N-terminal SSUBM407_0642 PF16360 GTP-binding GTPase Middle Region SSUBM407_0644 PF12706 Beta-lactamase superfamily domain SSUBM407_0644 PF00753 Metallo-beta-lactamase superfamily SSUBM407_0645 PF00106 short chain dehydrogenase SSUBM407_0647 PF13091 PLD-like domain SSUBM407_0648 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SSUBM407_0648 PF17768 RecJ OB domain SSUBM407_0648 PF02272 DHHA1 domain SSUBM407_0648 PF01368 DHH family SSUBM407_0650 PF00156 Phosphoribosyl transferase domain SSUBM407_0651 PF04204 Homoserine O-succinyltransferase SSUBM407_0653 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SSUBM407_0654 PF01784 NIF3 (NGG1p interacting factor 3) SSUBM407_0655 PF02535 ZIP Zinc transporter SSUBM407_0656 PF00483 Nucleotidyl transferase SSUBM407_0657 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SSUBM407_0659 PF16363 GDP-mannose 4,6 dehydratase SSUBM407_0660 PF04321 RmlD substrate binding domain SSUBM407_0662 PF01520 N-acetylmuramoyl-L-alanine amidase SSUBM407_0662 PF05036 Sporulation related domain SSUBM407_0666 PF00535 Glycosyl transferase family 2 SSUBM407_0668 PF14524 Wzt C-terminal domain SSUBM407_0668 PF00005 ABC transporter SSUBM407_0672 PF01501 Glycosyl transferase family 8 SSUBM407_0673 PF00535 Glycosyl transferase family 2 SSUBM407_0673 PF01501 Glycosyl transferase family 8 SSUBM407_0675 PF00534 Glycosyl transferases group 1 SSUBM407_0675 PF13439 Glycosyltransferase Family 4 SSUBM407_0676 PF00535 Glycosyl transferase family 2 SSUBM407_0682 PF02224 Cytidylate kinase SSUBM407_0683 PF05198 Translation initiation factor IF-3, N-terminal domain SSUBM407_0683 PF00707 Translation initiation factor IF-3, C-terminal domain SSUBM407_0684 PF01632 Ribosomal protein L35 SSUBM407_0685 PF00453 Ribosomal protein L20 SSUBM407_0687 PF00884 Sulfatase SSUBM407_0688 PF17785 PUA-like domain SSUBM407_0688 PF10672 S-adenosylmethionine-dependent methyltransferase SSUBM407_0689 PF01487 Type I 3-dehydroquinase SSUBM407_0690 PF01264 Chorismate synthase SSUBM407_0691 PF02153 Prephenate dehydrogenase SSUBM407_0692 PF06133 Control of competence regulator ComK, YlbF/YmcA SSUBM407_0693 PF01979 Amidohydrolase family SSUBM407_0694 PF01791 DeoC/LacD family aldolase SSUBM407_0698 PF02653 Branched-chain amino acid transport system / permease component SSUBM407_0699 PF00005 ABC transporter SSUBM407_0700 PF01761 3-dehydroquinate synthase SSUBM407_0701 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SSUBM407_0701 PF08501 Shikimate dehydrogenase substrate binding domain SSUBM407_0702 PF00793 DAHP synthetase I family SSUBM407_0703 PF00793 DAHP synthetase I family SSUBM407_0705 PF01588 Putative tRNA binding domain SSUBM407_0705 PF09334 tRNA synthetases class I (M) SSUBM407_0707 PF08439 Oligopeptidase F SSUBM407_0707 PF01432 Peptidase family M3 SSUBM407_0710 PF01596 O-methyltransferase SSUBM407_0711 PF13145 PPIC-type PPIASE domain SSUBM407_0713 PF02272 DHHA1 domain SSUBM407_0713 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSUBM407_0713 PF01411 tRNA synthetases class II (A) SSUBM407_0718 PF01381 Helix-turn-helix SSUBM407_0731 PF07470 Glycosyl Hydrolase Family 88 SSUBM407_0732 PF03830 PTS system sorbose subfamily IIB component SSUBM407_0734 PF03613 PTS system mannose/fructose/sorbose family IID component SSUBM407_0739 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_0740 PF00268 Ribonucleotide reductase, small chain SSUBM407_0742 PF00317 Ribonucleotide reductase, all-alpha domain SSUBM407_0742 PF08343 Ribonucleotide reductase N-terminal SSUBM407_0742 PF02867 Ribonucleotide reductase, barrel domain SSUBM407_0743 PF00462 Glutaredoxin SSUBM407_0744 PF00330 Aconitase family (aconitate hydratase) SSUBM407_0744 PF00694 Aconitase C-terminal domain SSUBM407_0745 PF00285 Citrate synthase, C-terminal domain SSUBM407_0746 PF00180 Isocitrate/isopropylmalate dehydrogenase SSUBM407_0747 PF00381 PTS HPr component phosphorylation site SSUBM407_0748 PF02896 PEP-utilising enzyme, TIM barrel domain SSUBM407_0748 PF00391 PEP-utilising enzyme, mobile domain SSUBM407_0748 PF05524 PEP-utilising enzyme, N-terminal SSUBM407_0749 PF08903 Domain of unknown function (DUF1846) SSUBM407_0750 PF00665 Integrase core domain SSUBM407_0750 PF13936 Helix-turn-helix domain SSUBM407_0754 PF14622 Ribonuclease-III-like SSUBM407_0754 PF00035 Double-stranded RNA binding motif SSUBM407_0755 PF06470 SMC proteins Flexible Hinge Domain SSUBM407_0755 PF02463 RecF/RecN/SMC N terminal domain SSUBM407_0758 PF02881 SRP54-type protein, helical bundle domain SSUBM407_0758 PF00448 SRP54-type protein, GTPase domain SSUBM407_0761 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SSUBM407_0761 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SSUBM407_0762 PF09323 Domain of unknown function (DUF1980) SSUBM407_0763 PF03773 Predicted permease SSUBM407_0764 PF00533 BRCA1 C Terminus (BRCT) domain SSUBM407_0764 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SSUBM407_0764 PF12826 Helix-hairpin-helix motif SSUBM407_0764 PF03120 NAD-dependent DNA ligase OB-fold domain SSUBM407_0764 PF01653 NAD-dependent DNA ligase adenylation domain SSUBM407_0765 PF00781 Diacylglycerol kinase catalytic domain SSUBM407_0766 PF00137 ATP synthase subunit C SSUBM407_0767 PF00119 ATP synthase A chain SSUBM407_0768 PF00430 ATP synthase B/B' CF(0) SSUBM407_0769 PF00213 ATP synthase delta (OSCP) subunit SSUBM407_0770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSUBM407_0770 PF00306 ATP synthase alpha/beta chain, C terminal domain SSUBM407_0770 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSUBM407_0771 PF00231 ATP synthase SSUBM407_0772 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSUBM407_0772 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSUBM407_0773 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SSUBM407_0773 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SSUBM407_0776 PF11772 DNA-directed RNA polymerase subunit beta SSUBM407_0777 PF01223 DNA/RNA non-specific endonuclease SSUBM407_0779 PF00294 pfkB family carbohydrate kinase SSUBM407_0780 PF00703 Glycosyl hydrolases family 2 SSUBM407_0780 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SSUBM407_0780 PF02837 Glycosyl hydrolases family 2, sugar binding domain SSUBM407_0781 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_0781 PF07729 FCD domain SSUBM407_0782 PF01081 KDPG and KHG aldolase SSUBM407_0783 PF02614 Glucuronate isomerase SSUBM407_0784 PF03786 D-mannonate dehydratase (UxuA) SSUBM407_0785 PF00106 short chain dehydrogenase SSUBM407_0787 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUBM407_0788 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUBM407_0789 PF01409 tRNA synthetases class II core domain (F) SSUBM407_0789 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SSUBM407_0790 PF13673 Acetyltransferase (GNAT) domain SSUBM407_0791 PF03483 B3/4 domain SSUBM407_0791 PF03484 tRNA synthetase B5 domain SSUBM407_0791 PF03147 Ferredoxin-fold anticodon binding domain SSUBM407_0791 PF01588 Putative tRNA binding domain SSUBM407_0791 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SSUBM407_0796 PF00293 NUDIX domain SSUBM407_0797 PF01227 GTP cyclohydrolase I SSUBM407_0798 PF00809 Pterin binding enzyme SSUBM407_0799 PF02152 Dihydroneopterin aldolase SSUBM407_0800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SSUBM407_0802 PF01545 Cation efflux family SSUBM407_0802 PF16916 Dimerisation domain of Zinc Transporter SSUBM407_0805 PF01047 MarR family SSUBM407_0806 PF06993 Protein of unknown function (DUF1304) SSUBM407_0813 PF07687 Peptidase dimerisation domain SSUBM407_0813 PF01546 Peptidase family M20/M25/M40 SSUBM407_0824 PF16198 tRNA pseudouridylate synthase B C-terminal domain SSUBM407_0824 PF01509 TruB family pseudouridylate synthase (N terminal domain) SSUBM407_0825 PF01687 Riboflavin kinase SSUBM407_0825 PF06574 FAD synthetase SSUBM407_0826 PF07885 Ion channel SSUBM407_0827 PF03960 ArsC family SSUBM407_0828 PF05256 Uncharacterised protein family (UPF0223) SSUBM407_0829 PF00459 Inositol monophosphatase family SSUBM407_0830 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SSUBM407_0830 PF01189 16S rRNA methyltransferase RsmB/F SSUBM407_0830 PF17126 RsmF rRNA methyltransferase first C-terminal domain SSUBM407_0831 PF12849 PBP superfamily domain SSUBM407_0832 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0833 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_0834 PF00005 ABC transporter SSUBM407_0835 PF00005 ABC transporter SSUBM407_0836 PF01895 PhoU domain SSUBM407_0839 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_0839 PF00072 Response regulator receiver domain SSUBM407_0840 PF00512 His Kinase A (phospho-acceptor) domain SSUBM407_0840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_0842 PF01797 Transposase IS200 like SSUBM407_0843 PF01649 Ribosomal protein S20 SSUBM407_0844 PF00485 Phosphoribulokinase / Uridine kinase family SSUBM407_0845 PF05175 Methyltransferase small domain SSUBM407_0846 PF02885 Glycosyl transferase family, helical bundle domain SSUBM407_0846 PF00591 Glycosyl transferase family, a/b domain SSUBM407_0846 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SSUBM407_0847 PF01791 DeoC/LacD family aldolase SSUBM407_0848 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSUBM407_0849 PF02608 ABC transporter substrate-binding protein PnrA-like SSUBM407_0850 PF00005 ABC transporter SSUBM407_0851 PF02653 Branched-chain amino acid transport system / permease component SSUBM407_0852 PF02653 Branched-chain amino acid transport system / permease component SSUBM407_0854 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SSUBM407_0854 PF00056 lactate/malate dehydrogenase, NAD binding domain SSUBM407_0855 PF03989 DNA gyrase C-terminal domain, beta-propeller SSUBM407_0855 PF00521 DNA gyrase/topoisomerase IV, subunit A SSUBM407_0856 PF04203 Sortase domain SSUBM407_0857 PF04002 RadC-like JAB domain SSUBM407_0858 PF07722 Peptidase C26 SSUBM407_0859 PF02629 CoA binding domain SSUBM407_0859 PF06971 Putative DNA-binding protein N-terminus SSUBM407_0862 PF00266 Aminotransferase class-V SSUBM407_0863 PF14572 Phosphoribosyl synthetase-associated domain SSUBM407_0863 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSUBM407_0864 PF01928 CYTH domain SSUBM407_0865 PF04607 Region found in RelA / SpoT proteins SSUBM407_0866 PF01513 ATP-NAD kinase SSUBM407_0867 PF00849 RNA pseudouridylate synthase SSUBM407_0868 PF01515 Phosphate acetyl/butaryl transferase SSUBM407_0869 PF00664 ABC transporter transmembrane region SSUBM407_0869 PF00005 ABC transporter SSUBM407_0870 PF00664 ABC transporter transmembrane region SSUBM407_0870 PF00005 ABC transporter SSUBM407_0872 PF14815 NUDIX domain SSUBM407_0872 PF00730 HhH-GPD superfamily base excision DNA repair protein SSUBM407_0873 PF08671 Anti-repressor SinI SSUBM407_0873 PF01381 Helix-turn-helix SSUBM407_0879 PF00455 DeoR C terminal sensor domain SSUBM407_0879 PF08220 DeoR-like helix-turn-helix domain SSUBM407_0881 PF02502 Ribose/Galactose Isomerase SSUBM407_0882 PF02502 Ribose/Galactose Isomerase SSUBM407_0884 PF01791 DeoC/LacD family aldolase SSUBM407_0885 PF00874 PRD domain SSUBM407_0885 PF03123 CAT RNA binding domain SSUBM407_0886 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUBM407_0887 PF02378 Phosphotransferase system, EIIC SSUBM407_0887 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_0888 PF00232 Glycosyl hydrolase family 1 SSUBM407_0889 PF01263 Aldose 1-epimerase SSUBM407_0892 PF01053 Cys/Met metabolism PLP-dependent enzyme SSUBM407_0893 PF00005 ABC transporter SSUBM407_0893 PF16326 ABC transporter C-terminal domain SSUBM407_0893 PF12848 ABC transporter SSUBM407_0895 PF00005 ABC transporter SSUBM407_0896 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_0897 PF17757 UvrB interaction domain SSUBM407_0897 PF12344 Ultra-violet resistance protein B SSUBM407_0897 PF02151 UvrB/uvrC motif SSUBM407_0897 PF04851 Type III restriction enzyme, res subunit SSUBM407_0897 PF00271 Helicase conserved C-terminal domain SSUBM407_0899 PF04851 Type III restriction enzyme, res subunit SSUBM407_0899 PF02151 UvrB/uvrC motif SSUBM407_0899 PF00271 Helicase conserved C-terminal domain SSUBM407_0899 PF12344 Ultra-violet resistance protein B SSUBM407_0899 PF17757 UvrB interaction domain SSUBM407_0900 PF07501 G5 domain SSUBM407_0900 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SSUBM407_0900 PF04650 YSIRK type signal peptide SSUBM407_0900 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SSUBM407_0902 PF00293 NUDIX domain SSUBM407_0903 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_0904 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_0905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUBM407_0905 PF02806 Alpha amylase, C-terminal all-beta domain SSUBM407_0905 PF00128 Alpha amylase, catalytic domain SSUBM407_0906 PF08323 Starch synthase catalytic domain SSUBM407_0906 PF00534 Glycosyl transferases group 1 SSUBM407_0907 PF00483 Nucleotidyl transferase SSUBM407_0907 PF00132 Bacterial transferase hexapeptide (six repeats) SSUBM407_0908 PF00483 Nucleotidyl transferase SSUBM407_0909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSUBM407_0909 PF03466 LysR substrate binding domain SSUBM407_0910 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SSUBM407_0911 PF01180 Dihydroorotate dehydrogenase SSUBM407_0912 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSUBM407_0913 PF00719 Inorganic pyrophosphatase SSUBM407_0914 PF00156 Phosphoribosyl transferase domain SSUBM407_0915 PF00535 Glycosyl transferase family 2 SSUBM407_0916 PF03167 Uracil DNA glycosylase superfamily SSUBM407_0917 PF01979 Amidohydrolase family SSUBM407_0918 PF00149 Calcineurin-like phosphoesterase SSUBM407_0918 PF02872 5'-nucleotidase, C-terminal domain SSUBM407_0919 PF02545 Maf-like protein SSUBM407_0921 PF01926 50S ribosome-binding GTPase SSUBM407_0922 PF01351 Ribonuclease HII SSUBM407_0924 PF03006 Haemolysin-III related SSUBM407_0926 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_0926 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_0927 PF00581 Rhodanese-like domain SSUBM407_0928 PF02583 Metal-sensitive transcriptional repressor SSUBM407_0929 PF12464 Maltose acetyltransferase SSUBM407_0929 PF14602 Hexapeptide repeat of succinyl-transferase SSUBM407_0930 PF18255 DNA processing protein A sterile alpha motif domain SSUBM407_0930 PF02481 DNA recombination-mediator protein A SSUBM407_0931 PF01396 Topoisomerase DNA binding C4 zinc finger SSUBM407_0931 PF01131 DNA topoisomerase SSUBM407_0931 PF01751 Toprim domain SSUBM407_0932 PF00466 Ribosomal protein L10 SSUBM407_0933 PF00542 Ribosomal protein L7/L12 C-terminal domain SSUBM407_0933 PF16320 Ribosomal protein L7/L12 dimerisation domain SSUBM407_0935 PF00145 C-5 cytosine-specific DNA methylase SSUBM407_0941 PF07728 AAA domain (dynein-related subfamily) SSUBM407_0941 PF08406 CbbQ/NirQ/NorQ C-terminal SSUBM407_0949 PF18652 Adhesin P1 N-terminal domain SSUBM407_0949 PF17998 Cell surface antigen I/II C2 terminal domain SSUBM407_0949 PF16364 Cell surface antigen C-terminus SSUBM407_0949 PF06696 Streptococcal surface antigen repeat SSUBM407_0949 PF08363 Glucan-binding protein C SSUBM407_0952 PF00398 Ribosomal RNA adenine dimethylase SSUBM407_0954 PF14492 Elongation Factor G, domain II SSUBM407_0954 PF03764 Elongation factor G, domain IV SSUBM407_0954 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0954 PF00679 Elongation factor G C-terminus SSUBM407_0955 PF04439 Streptomycin adenylyltransferase SSUBM407_0956 PF08241 Methyltransferase domain SSUBM407_0957 PF00186 Dihydrofolate reductase SSUBM407_0966 PF01381 Helix-turn-helix SSUBM407_0967 PF06414 Zeta toxin SSUBM407_0969 PF00580 UvrD/REP helicase N-terminal domain SSUBM407_0969 PF13361 UvrD-like helicase C-terminal domain SSUBM407_0970 PF06125 Bacterial protein of unknown function (DUF961) SSUBM407_0973 PF18106 Rolling Circle replication initiation protein N-terminal domain SSUBM407_0973 PF02486 Replication initiation factor SSUBM407_0980 PF00302 Chloramphenicol acetyltransferase SSUBM407_0981 PF00877 NlpC/P60 family SSUBM407_0983 PF03764 Elongation factor G, domain IV SSUBM407_0983 PF14492 Elongation Factor G, domain II SSUBM407_0983 PF00009 Elongation factor Tu GTP binding domain SSUBM407_0983 PF00679 Elongation factor G C-terminus SSUBM407_0984 PF07690 Major Facilitator Superfamily SSUBM407_0985 PF01076 Plasmid recombination enzyme SSUBM407_0988 PF09035 Excisionase from transposon Tn916 SSUBM407_0989 PF02920 DNA binding domain of tn916 integrase SSUBM407_0989 PF00589 Phage integrase family SSUBM407_0993 PF03432 Relaxase/Mobilisation nuclease domain SSUBM407_0995 PF00664 ABC transporter transmembrane region SSUBM407_0995 PF00005 ABC transporter SSUBM407_0996 PF00005 ABC transporter SSUBM407_0999 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_0999 PF00072 Response regulator receiver domain SSUBM407_1000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1000 PF00512 His Kinase A (phospho-acceptor) domain SSUBM407_1001 PF01381 Helix-turn-helix SSUBM407_1003 PF13495 Phage integrase, N-terminal SAM-like domain SSUBM407_1003 PF00589 Phage integrase family SSUBM407_1004 PF13344 Haloacid dehalogenase-like hydrolase SSUBM407_1005 PF01134 Glucose inhibited division protein A SSUBM407_1006 PF12833 Helix-turn-helix domain SSUBM407_1006 PF06445 GyrI-like small molecule binding domain SSUBM407_1008 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase SSUBM407_1008 PF00756 Putative esterase SSUBM407_1013 PF00005 ABC transporter SSUBM407_1016 PF00005 ABC transporter SSUBM407_1020 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_1020 PF00072 Response regulator receiver domain SSUBM407_1021 PF00512 His Kinase A (phospho-acceptor) domain SSUBM407_1021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1022 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSUBM407_1022 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSUBM407_1022 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSUBM407_1022 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSUBM407_1023 PF00589 Phage integrase family SSUBM407_1023 PF13495 Phage integrase, N-terminal SAM-like domain SSUBM407_1028 PF02978 Signal peptide binding domain SSUBM407_1028 PF00448 SRP54-type protein, GTPase domain SSUBM407_1028 PF02881 SRP54-type protein, helical bundle domain SSUBM407_1029 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SSUBM407_1030 PF07702 UTRA domain SSUBM407_1030 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_1031 PF00117 Glutamine amidotransferase class-I SSUBM407_1031 PF00958 GMP synthase C terminal domain SSUBM407_1031 PF02540 NAD synthase SSUBM407_1032 PF10117 McrBC 5-methylcytosine restriction system component SSUBM407_1033 PF12102 Domain of unknown function (DUF3578) SSUBM407_1033 PF07728 AAA domain (dynein-related subfamily) SSUBM407_1038 PF00106 short chain dehydrogenase SSUBM407_1041 PF00464 Serine hydroxymethyltransferase SSUBM407_1043 PF03481 Putative GTP-binding controlling metal-binding SSUBM407_1043 PF01300 Telomere recombination SSUBM407_1044 PF05175 Methyltransferase small domain SSUBM407_1045 PF00472 RF-1 domain SSUBM407_1045 PF03462 PCRF domain SSUBM407_1046 PF00265 Thymidine kinase SSUBM407_1049 PF01361 Tautomerase enzyme SSUBM407_1050 PF00679 Elongation factor G C-terminus SSUBM407_1050 PF14492 Elongation Factor G, domain II SSUBM407_1050 PF06421 GTP-binding protein LepA C-terminus SSUBM407_1050 PF03144 Elongation factor Tu domain 2 SSUBM407_1050 PF00009 Elongation factor Tu GTP binding domain SSUBM407_1052 PF00334 Nucleoside diphosphate kinase SSUBM407_1053 PF01926 50S ribosome-binding GTPase SSUBM407_1054 PF07724 AAA domain (Cdc48 subfamily) SSUBM407_1054 PF06689 ClpX C4-type zinc finger SSUBM407_1054 PF10431 C-terminal, D2-small domain, of ClpB protein SSUBM407_1056 PF00186 Dihydrofolate reductase SSUBM407_1057 PF00303 Thymidylate synthase SSUBM407_1060 PF00480 ROK family SSUBM407_1062 PF12848 ABC transporter SSUBM407_1062 PF00005 ABC transporter SSUBM407_1062 PF16326 ABC transporter C-terminal domain SSUBM407_1063 PF12627 Probable RNA and SrmB- binding site of polymerase A SSUBM407_1063 PF01743 Poly A polymerase head domain SSUBM407_1063 PF13735 tRNA nucleotidyltransferase domain 2 putative SSUBM407_1064 PF05173 Dihydrodipicolinate reductase, C-terminus SSUBM407_1064 PF01113 Dihydrodipicolinate reductase, N-terminus SSUBM407_1065 PF02645 Uncharacterised protein, DegV family COG1307 SSUBM407_1067 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_1067 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUBM407_1068 PF00294 pfkB family carbohydrate kinase SSUBM407_1069 PF00455 DeoR C terminal sensor domain SSUBM407_1069 PF08220 DeoR-like helix-turn-helix domain SSUBM407_1070 PF00155 Aminotransferase class I and II SSUBM407_1071 PF01746 tRNA (Guanine-1)-methyltransferase SSUBM407_1072 PF01782 RimM N-terminal domain SSUBM407_1072 PF05239 PRC-barrel domain SSUBM407_1074 PF00478 IMP dehydrogenase / GMP reductase domain SSUBM407_1075 PF00633 Helix-hairpin-helix motif SSUBM407_1075 PF00730 HhH-GPD superfamily base excision DNA repair protein SSUBM407_1075 PF10576 Iron-sulfur binding domain of endonuclease III SSUBM407_1076 PF01256 Carbohydrate kinase SSUBM407_1079 PF00654 Voltage gated chloride channel SSUBM407_1080 PF13416 Bacterial extracellular solute-binding protein SSUBM407_1081 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1082 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1083 PF08402 TOBE domain SSUBM407_1083 PF00005 ABC transporter SSUBM407_1084 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SSUBM407_1084 PF01565 FAD binding domain SSUBM407_1085 PF00288 GHMP kinases N terminal domain SSUBM407_1085 PF08544 GHMP kinases C terminal SSUBM407_1086 PF03447 Homoserine dehydrogenase, NAD binding domain SSUBM407_1086 PF00742 Homoserine dehydrogenase SSUBM407_1087 PF01522 Polysaccharide deacetylase SSUBM407_1088 PF00664 ABC transporter transmembrane region SSUBM407_1088 PF00005 ABC transporter SSUBM407_1089 PF00664 ABC transporter transmembrane region SSUBM407_1089 PF00005 ABC transporter SSUBM407_1091 PF00886 Ribosomal protein S16 SSUBM407_1093 PF01470 Pyroglutamyl peptidase SSUBM407_1094 PF04445 Putative SAM-dependent methyltransferase SSUBM407_1095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSUBM407_1095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSUBM407_1095 PF02142 MGS-like domain SSUBM407_1096 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SSUBM407_1096 PF00117 Glutamine amidotransferase class-I SSUBM407_1097 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSUBM407_1097 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSUBM407_1098 PF00156 Phosphoribosyl transferase domain SSUBM407_1100 PF08274 PhnA Zinc-Ribbon SSUBM407_1100 PF03831 PhnA domain SSUBM407_1101 PF00849 RNA pseudouridylate synthase SSUBM407_1101 PF01479 S4 domain SSUBM407_1102 PF01252 Signal peptidase (SPase) II SSUBM407_1102b PF01252 Signal peptidase (SPase) II SSUBM407_1103 PF03466 LysR substrate binding domain SSUBM407_1103 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSUBM407_1105 PF01016 Ribosomal L27 protein SSUBM407_1106 PF00829 Ribosomal prokaryotic L21 protein SSUBM407_1107 PF05525 Branched-chain amino acid transport protein SSUBM407_1108 PF02568 Thiamine biosynthesis protein (ThiI) SSUBM407_1108 PF02926 THUMP domain SSUBM407_1109 PF00266 Aminotransferase class-V SSUBM407_1113 PF00575 S1 RNA binding domain SSUBM407_1115 PF01063 Amino-transferase class IV SSUBM407_1117 PF03989 DNA gyrase C-terminal domain, beta-propeller SSUBM407_1117 PF00521 DNA gyrase/topoisomerase IV, subunit A SSUBM407_1121 PF01751 Toprim domain SSUBM407_1121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1121 PF00204 DNA gyrase B SSUBM407_1121 PF00986 DNA gyrase B subunit, carboxyl terminus SSUBM407_1123 PF01751 Toprim domain SSUBM407_1123 PF00204 DNA gyrase B SSUBM407_1123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1123 PF00986 DNA gyrase B subunit, carboxyl terminus SSUBM407_1124 PF02660 Glycerol-3-phosphate acyltransferase SSUBM407_1125 PF13610 DDE domain SSUBM407_1126 PF00746 LPXTG cell wall anchor motif SSUBM407_1126 PF06458 MucBP domain SSUBM407_1126 PF04650 YSIRK type signal peptide SSUBM407_1128 PF01926 50S ribosome-binding GTPase SSUBM407_1128 PF01018 GTP1/OBG SSUBM407_1128 PF09269 Domain of unknown function (DUF1967) SSUBM407_1130 PF08459 UvrC Helix-hairpin-helix N-terminal SSUBM407_1130 PF01541 GIY-YIG catalytic domain SSUBM407_1130 PF02151 UvrB/uvrC motif SSUBM407_1131 PF00005 ABC transporter SSUBM407_1137 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_1138 PF00005 ABC transporter SSUBM407_1139 PF00005 ABC transporter SSUBM407_1140 PF02361 Cobalt transport protein SSUBM407_1142 PF01048 Phosphorylase superfamily SSUBM407_1144 PF02581 Thiamine monophosphate synthase SSUBM407_1145 PF02110 Hydroxyethylthiazole kinase family SSUBM407_1146 PF08543 Phosphomethylpyrimidine kinase SSUBM407_1148 PF00580 UvrD/REP helicase N-terminal domain SSUBM407_1148 PF13361 UvrD-like helicase C-terminal domain SSUBM407_1149 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_1149 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1151 PF08439 Oligopeptidase F SSUBM407_1151 PF01432 Peptidase family M3 SSUBM407_1153 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSUBM407_1154 PF00230 Major intrinsic protein SSUBM407_1155 PF01266 FAD dependent oxidoreductase SSUBM407_1155 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SSUBM407_1156 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSUBM407_1156 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSUBM407_1158 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1158 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_1159 PF00701 Dihydrodipicolinate synthetase family SSUBM407_1160 PF01118 Semialdehyde dehydrogenase, NAD binding domain SSUBM407_1160 PF02774 Semialdehyde dehydrogenase, dimerisation domain SSUBM407_1161 PF00465 Iron-containing alcohol dehydrogenase SSUBM407_1163 PF00923 Transaldolase/Fructose-6-phosphate aldolase SSUBM407_1164 PF01228 Glycine radical SSUBM407_1164 PF02901 Pyruvate formate lyase-like SSUBM407_1165 PF02378 Phosphotransferase system, EIIC SSUBM407_1166 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_1167 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUBM407_1168 PF04198 Putative sugar-binding domain SSUBM407_1168 PF13936 Helix-turn-helix domain SSUBM407_1169 PF08220 DeoR-like helix-turn-helix domain SSUBM407_1169 PF00455 DeoR C terminal sensor domain SSUBM407_1170 PF04055 Radical SAM superfamily SSUBM407_1177 PF01420 Type I restriction modification DNA specificity domain SSUBM407_1179 PF18766 SWI2/SNF2 ATPase SSUBM407_1179 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSUBM407_1179 PF11867 Domain of unknown function (DUF3387) SSUBM407_1180 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_1182 PF01268 Formate--tetrahydrofolate ligase SSUBM407_1183 PF02441 Flavoprotein SSUBM407_1183 PF04127 DNA / pantothenate metabolism flavoprotein SSUBM407_1184 PF02441 Flavoprotein SSUBM407_1185 PF12822 ECF transporter, substrate-specific component SSUBM407_1186 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSUBM407_1186 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSUBM407_1186 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSUBM407_1186 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSUBM407_1188 PF04851 Type III restriction enzyme, res subunit SSUBM407_1188 PF08774 VRR-NUC domain SSUBM407_1195 PF13520 Amino acid permease SSUBM407_1197 PF03372 Endonuclease/Exonuclease/phosphatase family SSUBM407_1199 PF03960 ArsC family SSUBM407_1200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SSUBM407_1200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SSUBM407_1201 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SSUBM407_1201 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SSUBM407_1201 PF01842 ACT domain SSUBM407_1203 PF00266 Aminotransferase class-V SSUBM407_1204 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SSUBM407_1205 PF06156 Initiation control protein YabA SSUBM407_1206 PF09115 DNA polymerase III, delta subunit, C terminal SSUBM407_1207 PF02223 Thymidylate kinase SSUBM407_1208 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUBM407_1208 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUBM407_1211 PF00571 CBS domain SSUBM407_1213 PF03772 Competence protein SSUBM407_1213 PF13567 Domain of unknown function (DUF4131) SSUBM407_1213 PF00753 Metallo-beta-lactamase superfamily SSUBM407_1214 PF10531 SLBB domain SSUBM407_1215 PF01553 Acyltransferase SSUBM407_1216 PF08245 Mur ligase middle domain SSUBM407_1216 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_1217 PF00005 ABC transporter SSUBM407_1218 PF01497 Periplasmic binding protein SSUBM407_1219 PF01032 FecCD transport family SSUBM407_1220 PF01032 FecCD transport family SSUBM407_1221 PF00255 Glutathione peroxidase SSUBM407_1222 PF00849 RNA pseudouridylate synthase SSUBM407_1222 PF01479 S4 domain SSUBM407_1223 PF13409 Glutathione S-transferase, N-terminal domain SSUBM407_1225 PF04914 DltD protein SSUBM407_1226 PF00550 Phosphopantetheine attachment site SSUBM407_1227 PF03062 MBOAT, membrane-bound O-acyltransferase family SSUBM407_1228 PF13193 AMP-binding enzyme C-terminal domain SSUBM407_1228 PF00501 AMP-binding enzyme SSUBM407_1233 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSUBM407_1234 PF02547 Queuosine biosynthesis protein SSUBM407_1235 PF01316 Arginine repressor, DNA binding domain SSUBM407_1235 PF02863 Arginine repressor, C-terminal domain SSUBM407_1236 PF00746 LPXTG cell wall anchor motif SSUBM407_1236 PF00728 Glycosyl hydrolase family 20, catalytic domain SSUBM407_1236 PF07501 G5 domain SSUBM407_1236 PF04650 YSIRK type signal peptide SSUBM407_1238 PF03606 C4-dicarboxylate anaerobic carrier SSUBM407_1239 PF00696 Amino acid kinase family SSUBM407_1240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSUBM407_1240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSUBM407_1241 PF13673 Acetyltransferase (GNAT) domain SSUBM407_1244 PF14527 WhiA LAGLIDADG-like domain SSUBM407_1244 PF02650 WhiA C-terminal HTH domain SSUBM407_1244 PF10298 WhiA N-terminal LAGLIDADG-like domain SSUBM407_1245 PF01933 Uncharacterised protein family UPF0052 SSUBM407_1246 PF03668 P-loop ATPase protein family SSUBM407_1247 PF01042 Endoribonuclease L-PSP SSUBM407_1248 PF01554 MatE SSUBM407_1251 PF00152 tRNA synthetases class II (D, K and N) SSUBM407_1251 PF01336 OB-fold nucleic acid binding domain SSUBM407_1252 PF00155 Aminotransferase class I and II SSUBM407_1257 PF02525 Flavodoxin-like fold SSUBM407_1258 PF03275 UDP-galactopyranose mutase SSUBM407_1260 PF05958 tRNA (Uracil-5-)-methyltransferase SSUBM407_1261 PF03816 Cell envelope-related transcriptional attenuator domain SSUBM407_1262 PF00800 Prephenate dehydratase SSUBM407_1263 PF01202 Shikimate kinase SSUBM407_1264 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSUBM407_1270 PF13936 Helix-turn-helix domain SSUBM407_1277 PF02348 Cytidylyltransferase SSUBM407_1277 PF13472 GDSL-like Lipase/Acylhydrolase family SSUBM407_1279 PF02350 UDP-N-acetylglucosamine 2-epimerase SSUBM407_1280 PF08666 SAF domain SSUBM407_1280 PF03102 NeuB family SSUBM407_1287 PF01501 Glycosyl transferase family 8 SSUBM407_1287 PF00535 Glycosyl transferase family 2 SSUBM407_1288 PF00535 Glycosyl transferase family 2 SSUBM407_1288 PF01501 Glycosyl transferase family 8 SSUBM407_1292 PF13439 Glycosyltransferase Family 4 SSUBM407_1292 PF00534 Glycosyl transferases group 1 SSUBM407_1294 PF02397 Bacterial sugar transferase SSUBM407_1296 PF13614 AAA domain SSUBM407_1297 PF02706 Chain length determinant protein SSUBM407_1299 PF03883 Peroxide stress protein YaaA SSUBM407_1300 PF00155 Aminotransferase class I and II SSUBM407_1300 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_1301 PF02645 Uncharacterised protein, DegV family COG1307 SSUBM407_1303 PF14748 Pyrroline-5-carboxylate reductase dimerisation SSUBM407_1303 PF03807 NADP oxidoreductase coenzyme F420-dependent SSUBM407_1304 PF00171 Aldehyde dehydrogenase family SSUBM407_1305 PF01472 PUA domain SSUBM407_1305 PF00696 Amino acid kinase family SSUBM407_1306 PF00929 Exonuclease SSUBM407_1306 PF13307 Helicase C-terminal domain SSUBM407_1307 PF00753 Metallo-beta-lactamase superfamily SSUBM407_1311 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_1312 PF00005 ABC transporter SSUBM407_1313 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1314 PF01380 SIS domain SSUBM407_1315 PF10502 Signal peptidase, peptidase S26 SSUBM407_1316 PF13472 GDSL-like Lipase/Acylhydrolase family SSUBM407_1316 PF07859 alpha/beta hydrolase fold SSUBM407_1317 PF01266 FAD dependent oxidoreductase SSUBM407_1318 PF09028 Mac 1 SSUBM407_1319 PF00224 Pyruvate kinase, barrel domain SSUBM407_1319 PF02887 Pyruvate kinase, alpha/beta domain SSUBM407_1320 PF00365 Phosphofructokinase SSUBM407_1321 PF01336 OB-fold nucleic acid binding domain SSUBM407_1321 PF02811 PHP domain SSUBM407_1321 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSUBM407_1321 PF14579 Helix-hairpin-helix motif SSUBM407_1321 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSUBM407_1322 PF00392 Bacterial regulatory proteins, gntR family SSUBM407_1322 PF07702 UTRA domain SSUBM407_1323 PF00005 ABC transporter SSUBM407_1325 PF00962 Adenosine/AMP deaminase SSUBM407_1326 PF00665 Integrase core domain SSUBM407_1326 PF13936 Helix-turn-helix domain SSUBM407_1330 PF01883 Iron-sulfur cluster assembly protein SSUBM407_1331 PF00140 Sigma-70 factor, region 1.2 SSUBM407_1331 PF03979 Sigma-70 factor, region 1.1 SSUBM407_1331 PF04542 Sigma-70 region 2 SSUBM407_1331 PF04539 Sigma-70 region 3 SSUBM407_1331 PF04545 Sigma-70, region 4 SSUBM407_1332 PF01807 CHC2 zinc finger SSUBM407_1332 PF10410 DnaB-helicase binding domain of primase SSUBM407_1332 PF08275 DNA primase catalytic core, N-terminal domain SSUBM407_1333 PF01741 Large-conductance mechanosensitive channel, MscL SSUBM407_1334 PF16363 GDP-mannose 4,6 dehydratase SSUBM407_1335 PF01165 Ribosomal protein S21 SSUBM407_1337 PF13344 Haloacid dehalogenase-like hydrolase SSUBM407_1338 PF00293 NUDIX domain SSUBM407_1340 PF04055 Radical SAM superfamily SSUBM407_1340 PF06969 HemN C-terminal domain SSUBM407_1342 PF00343 Carbohydrate phosphorylase SSUBM407_1343 PF01048 Phosphorylase superfamily SSUBM407_1344 PF01048 Phosphorylase superfamily SSUBM407_1346 PF01676 Metalloenzyme superfamily SSUBM407_1347 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SSUBM407_1348 PF01420 Type I restriction modification DNA specificity domain SSUBM407_1349 PF01420 Type I restriction modification DNA specificity domain SSUBM407_1350 PF12161 HsdM N-terminal domain SSUBM407_1350 PF02384 N-6 DNA Methylase SSUBM407_1351 PF00271 Helicase conserved C-terminal domain SSUBM407_1351 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) SSUBM407_1351 PF04851 Type III restriction enzyme, res subunit SSUBM407_1351 PF08463 EcoEI R protein C-terminal SSUBM407_1352 PF10396 GTP-binding protein TrmE N-terminus SSUBM407_1352 PF01926 50S ribosome-binding GTPase SSUBM407_1352 PF12631 MnmE helical domain SSUBM407_1355 PF01145 SPFH domain / Band 7 family SSUBM407_1355 PF15975 Flotillin SSUBM407_1356 PF04011 LemA family SSUBM407_1358 PF03167 Uracil DNA glycosylase superfamily SSUBM407_1360 PF01546 Peptidase family M20/M25/M40 SSUBM407_1361 PF00375 Sodium:dicarboxylate symporter family SSUBM407_1365 PF08241 Methyltransferase domain SSUBM407_1366 PF00005 ABC transporter SSUBM407_1366 PF12848 ABC transporter SSUBM407_1367 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSUBM407_1367 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSUBM407_1367 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSUBM407_1367 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSUBM407_1369 PF02457 DisA bacterial checkpoint controller nucleotide-binding SSUBM407_1370 PF08353 Domain of unknown function (DUF1727) SSUBM407_1370 PF08245 Mur ligase middle domain SSUBM407_1371 PF07685 CobB/CobQ-like glutamine amidotransferase domain SSUBM407_1372 PF13847 Methyltransferase domain SSUBM407_1375 PF12848 ABC transporter SSUBM407_1375 PF00005 ABC transporter SSUBM407_1375 PF16326 ABC transporter C-terminal domain SSUBM407_1379 PF00753 Metallo-beta-lactamase superfamily SSUBM407_1379 PF17770 Ribonuclease J C-terminal domain SSUBM407_1379 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSUBM407_1382 PF08402 TOBE domain SSUBM407_1382 PF00005 ABC transporter SSUBM407_1385 PF00232 Glycosyl hydrolase family 1 SSUBM407_1386 PF00367 phosphotransferase system, EIIB SSUBM407_1386 PF02378 Phosphotransferase system, EIIC SSUBM407_1386 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUBM407_1387 PF00874 PRD domain SSUBM407_1387 PF03123 CAT RNA binding domain SSUBM407_1388 PF05670 NFACT protein RNA binding domain SSUBM407_1389 PF03306 Alpha-acetolactate decarboxylase SSUBM407_1391 PF01594 AI-2E family transporter SSUBM407_1392 PF10282 Lactonase, 7-bladed beta-propeller SSUBM407_1394 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_1397 PF03952 Enolase, N-terminal domain SSUBM407_1397 PF00113 Enolase, C-terminal TIM barrel domain SSUBM407_1399 PF02595 Glycerate kinase family SSUBM407_1400 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_1403 PF06160 Septation ring formation regulator, EzrA SSUBM407_1404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1404 PF00204 DNA gyrase B SSUBM407_1404 PF00986 DNA gyrase B subunit, carboxyl terminus SSUBM407_1404 PF01751 Toprim domain SSUBM407_1405 PF01965 DJ-1/PfpI family SSUBM407_1406 PF01098 Cell cycle protein SSUBM407_1407 PF00589 Phage integrase family SSUBM407_1422 PF01381 Helix-turn-helix SSUBM407_1424 PF02899 Phage integrase, N-terminal SAM-like domain SSUBM407_1424 PF00589 Phage integrase family SSUBM407_1425 PF01197 Ribosomal protein L31 SSUBM407_1426 PF02424 ApbE family SSUBM407_1427 PF02272 DHHA1 domain SSUBM407_1427 PF01368 DHH family SSUBM407_1428 PF00258 Flavodoxin SSUBM407_1429 PF00253 Ribosomal protein S14p/S29e SSUBM407_1430 PF01817 Chorismate mutase type II SSUBM407_1430 PF02153 Prephenate dehydrogenase SSUBM407_1431 PF00654 Voltage gated chloride channel SSUBM407_1432 PF02872 5'-nucleotidase, C-terminal domain SSUBM407_1432 PF00149 Calcineurin-like phosphoesterase SSUBM407_1432 PF17936 Bacterial Ig domain SSUBM407_1433 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SSUBM407_1433 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SSUBM407_1434 PF06144 DNA polymerase III, delta subunit SSUBM407_1436 PF02677 Epoxyqueuosine reductase QueH SSUBM407_1437 PF00005 ABC transporter SSUBM407_1438 PF00005 ABC transporter SSUBM407_1438 PF12399 Branched-chain amino acid ATP-binding cassette transporter SSUBM407_1439 PF02653 Branched-chain amino acid transport system / permease component SSUBM407_1439 PF11862 Domain of unknown function (DUF3382) SSUBM407_1440 PF02653 Branched-chain amino acid transport system / permease component SSUBM407_1441 PF13458 Periplasmic binding protein SSUBM407_1442 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SSUBM407_1443 PF00574 Clp protease SSUBM407_1445 PF00128 Alpha amylase, catalytic domain SSUBM407_1445 PF16657 Maltogenic Amylase, C-terminal domain SSUBM407_1446 PF00128 Alpha amylase, catalytic domain SSUBM407_1447 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1448 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1449 PF01547 Bacterial extracellular solute-binding protein SSUBM407_1450 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSUBM407_1450 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSUBM407_1451 PF02311 AraC-like ligand binding domain SSUBM407_1451 PF12833 Helix-turn-helix domain SSUBM407_1452 PF00155 Aminotransferase class I and II SSUBM407_1453 PF01053 Cys/Met metabolism PLP-dependent enzyme SSUBM407_1457 PF05175 Methyltransferase small domain SSUBM407_1458 PF01541 GIY-YIG catalytic domain SSUBM407_1460 PF02525 Flavodoxin-like fold SSUBM407_1463 PF01022 Bacterial regulatory protein, arsR family SSUBM407_1464 PF00271 Helicase conserved C-terminal domain SSUBM407_1464 PF00270 DEAD/DEAH box helicase SSUBM407_1465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUBM407_1465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUBM407_1466 PF08000 Bacterial PH domain SSUBM407_1471 PF01048 Phosphorylase superfamily SSUBM407_1473 PF00293 NUDIX domain SSUBM407_1474 PF12804 MobA-like NTP transferase domain SSUBM407_1474 PF14602 Hexapeptide repeat of succinyl-transferase SSUBM407_1474 PF00132 Bacterial transferase hexapeptide (six repeats) SSUBM407_1482 PF01797 Transposase IS200 like SSUBM407_1483 PF02687 FtsX-like permease family SSUBM407_1484 PF00005 ABC transporter SSUBM407_1485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1486 PF00072 Response regulator receiver domain SSUBM407_1486 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_1488 PF00155 Aminotransferase class I and II SSUBM407_1490 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1491 PF00005 ABC transporter SSUBM407_1491 PF00571 CBS domain SSUBM407_1495 PF01790 Prolipoprotein diacylglyceryl transferase SSUBM407_1496 PF02603 HPr Serine kinase N terminus SSUBM407_1496 PF07475 HPr Serine kinase C-terminal domain SSUBM407_1497 PF01238 Phosphomannose isomerase type I SSUBM407_1501 PF10263 SprT-like family SSUBM407_1501 PF17283 SprT-like zinc ribbon domain SSUBM407_1502 PF09371 Tex-like protein N-terminal domain SSUBM407_1502 PF00575 S1 RNA binding domain SSUBM407_1502 PF17674 HHH domain SSUBM407_1502 PF16921 Tex protein YqgF-like domain SSUBM407_1503 PF00248 Aldo/keto reductase family SSUBM407_1504 PF06177 QueT transporter SSUBM407_1505 PF04138 GtrA-like protein SSUBM407_1507 PF00557 Metallopeptidase family M24 SSUBM407_1509 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSUBM407_1510 PF02525 Flavodoxin-like fold SSUBM407_1511 PF02773 S-adenosylmethionine synthetase, C-terminal domain SSUBM407_1511 PF00438 S-adenosylmethionine synthetase, N-terminal domain SSUBM407_1511 PF02772 S-adenosylmethionine synthetase, central domain SSUBM407_1512 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSUBM407_1514 PF05343 M42 glutamyl aminopeptidase SSUBM407_1517 PF12169 DNA polymerase III subunits gamma and tau domain III SSUBM407_1518 PF13185 GAF domain SSUBM407_1520 PF03551 Transcriptional regulator PadR-like family SSUBM407_1520 PF10400 Virulence activator alpha C-term SSUBM407_1521 PF00485 Phosphoribulokinase / Uridine kinase family SSUBM407_1523 PF00271 Helicase conserved C-terminal domain SSUBM407_1523 PF00270 DEAD/DEAH box helicase SSUBM407_1524 PF01522 Polysaccharide deacetylase SSUBM407_1524 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SSUBM407_1527 PF00300 Histidine phosphatase superfamily (branch 1) SSUBM407_1528 PF00108 Thiolase, N-terminal domain SSUBM407_1528 PF02803 Thiolase, C-terminal domain SSUBM407_1529 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SSUBM407_1529 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SSUBM407_1530 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SSUBM407_1534 PF00216 Bacterial DNA-binding protein SSUBM407_1536 PF13472 GDSL-like Lipase/Acylhydrolase family SSUBM407_1537 PF02645 Uncharacterised protein, DegV family COG1307 SSUBM407_1538 PF13476 AAA domain SSUBM407_1539 PF01316 Arginine repressor, DNA binding domain SSUBM407_1539 PF02863 Arginine repressor, C-terminal domain SSUBM407_1540 PF01479 S4 domain SSUBM407_1540 PF01728 FtsJ-like methyltransferase SSUBM407_1541 PF00348 Polyprenyl synthetase SSUBM407_1542 PF02609 Exonuclease VII small subunit SSUBM407_1543 PF13742 OB-fold nucleic acid binding domain SSUBM407_1543 PF02601 Exonuclease VII, large subunit SSUBM407_1544 PF04228 Putative neutral zinc metallopeptidase SSUBM407_1545 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SSUBM407_1546 PF00672 HAMP domain SSUBM407_1546 PF00512 His Kinase A (phospho-acceptor) domain SSUBM407_1546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1547 PF00072 Response regulator receiver domain SSUBM407_1547 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_1552 PF01368 DHH family SSUBM407_1552 PF02833 DHHA2 domain SSUBM407_1554 PF04055 Radical SAM superfamily SSUBM407_1555 PF00571 CBS domain SSUBM407_1555 PF03471 Transporter associated domain SSUBM407_1555 PF01595 Cyclin M transmembrane N-terminal domain SSUBM407_1556 PF00005 ABC transporter SSUBM407_1557 PF06962 Putative rRNA methylase SSUBM407_1559 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SSUBM407_1559 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SSUBM407_1559 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SSUBM407_1560 PF02540 NAD synthase SSUBM407_1562 PF04055 Radical SAM superfamily SSUBM407_1563 PF06265 Protein of unknown function (DUF1027) SSUBM407_1564 PF13180 PDZ domain SSUBM407_1564 PF05362 Lon protease (S16) C-terminal proteolytic domain SSUBM407_1565 PF01467 Cytidylyltransferase-like SSUBM407_1568 PF00581 Rhodanese-like domain SSUBM407_1569 PF06014 Bacterial protein of unknown function (DUF910) SSUBM407_1570 PF00196 Bacterial regulatory proteins, luxR family SSUBM407_1570 PF00072 Response regulator receiver domain SSUBM407_1571 PF07730 Histidine kinase SSUBM407_1571 PF13185 GAF domain SSUBM407_1573 PF00005 ABC transporter SSUBM407_1574 PF00210 Ferritin-like domain SSUBM407_1575 PF05532 CsbD-like SSUBM407_1576 PF01451 Low molecular weight phosphotyrosine protein phosphatase SSUBM407_1578 PF01757 Acyltransferase family SSUBM407_1579 PF01569 PAP2 superfamily SSUBM407_1580 PF12822 ECF transporter, substrate-specific component SSUBM407_1581 PF00588 SpoU rRNA Methylase family SSUBM407_1583 PF01809 Putative membrane protein insertion efficiency factor SSUBM407_1584 PF00849 RNA pseudouridylate synthase SSUBM407_1584 PF01479 S4 domain SSUBM407_1585 PF04079 Segregation and condensation complex subunit ScpB SSUBM407_1586 PF02616 Segregation and condensation protein ScpA SSUBM407_1587 PF00589 Phage integrase family SSUBM407_1590 PF01725 Ham1 family SSUBM407_1591 PF01177 Asp/Glu/Hydantoin racemase SSUBM407_1592 PF03672 Uncharacterised protein family (UPF0154) SSUBM407_1593 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SSUBM407_1593 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SSUBM407_1594 PF03051 Peptidase C1-like family SSUBM407_1595 PF01027 Inhibitor of apoptosis-promoting Bax1 SSUBM407_1597 PF00588 SpoU rRNA Methylase family SSUBM407_1597 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSUBM407_1598 PF00708 Acylphosphatase SSUBM407_1599 PF02096 60Kd inner membrane protein SSUBM407_1600 PF03449 Transcription elongation factor, N-terminal SSUBM407_1600 PF01272 Transcription elongation factor, GreA/GreB, C-term SSUBM407_1601 PF02618 YceG-like family SSUBM407_1603 PF08245 Mur ligase middle domain SSUBM407_1603 PF02875 Mur ligase family, glutamate ligase domain SSUBM407_1603 PF01225 Mur ligase family, catalytic domain SSUBM407_1605 PF00271 Helicase conserved C-terminal domain SSUBM407_1605 PF00176 SNF2 family N-terminal domain SSUBM407_1605 PF04434 SWIM zinc finger SSUBM407_1608 PF01926 50S ribosome-binding GTPase SSUBM407_1608 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SSUBM407_1610 PF07319 Primosomal protein DnaI N-terminus SSUBM407_1610 PF01695 IstB-like ATP binding protein SSUBM407_1612 PF03477 ATP cone domain SSUBM407_1613 PF01594 AI-2E family transporter SSUBM407_1614 PF00072 Response regulator receiver domain SSUBM407_1614 PF00486 Transcriptional regulatory protein, C terminal SSUBM407_1615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SSUBM407_1615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SSUBM407_1617 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1619 PF00271 Helicase conserved C-terminal domain SSUBM407_1619 PF00270 DEAD/DEAH box helicase SSUBM407_1621 PF00953 Glycosyl transferase family 4 SSUBM407_1621 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SSUBM407_1622 PF03793 PASTA domain SSUBM407_1622 PF00905 Penicillin binding protein transpeptidase domain SSUBM407_1622 PF03717 Penicillin-binding Protein dimerisation domain SSUBM407_1624 PF01795 MraW methylase family SSUBM407_1633 PF02424 ApbE family SSUBM407_1634 PF04205 FMN-binding domain SSUBM407_1635 PF00348 Polyprenyl synthetase SSUBM407_1636 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1639 PF02386 Cation transport protein SSUBM407_1640 PF02254 TrkA-N domain SSUBM407_1640 PF02080 TrkA-C domain SSUBM407_1641 PF01554 MatE SSUBM407_1643 PF05979 Bacterial protein of unknown function (DUF896) SSUBM407_1644 PF02092 Glycyl-tRNA synthetase beta subunit SSUBM407_1645 PF02091 Glycyl-tRNA synthetase alpha subunit SSUBM407_1648 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1649 PF00005 ABC transporter SSUBM407_1649 PF09383 NIL domain SSUBM407_1650 PF07687 Peptidase dimerisation domain SSUBM407_1650 PF01546 Peptidase family M20/M25/M40 SSUBM407_1651 PF03180 NLPA lipoprotein SSUBM407_1652 PF07722 Peptidase C26 SSUBM407_1653 PF01717 Cobalamin-independent synthase, Catalytic domain SSUBM407_1653 PF08267 Cobalamin-independent synthase, N-terminal domain SSUBM407_1654 PF02219 Methylenetetrahydrofolate reductase SSUBM407_1655 PF00860 Permease family SSUBM407_1657 PF03610 PTS system fructose IIA component SSUBM407_1657 PF03830 PTS system sorbose subfamily IIB component SSUBM407_1658 PF03609 PTS system sorbose-specific iic component SSUBM407_1659 PF03613 PTS system mannose/fructose/sorbose family IID component SSUBM407_1661 PF02403 Seryl-tRNA synthetase N-terminal domain SSUBM407_1661 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUBM407_1662 PF02384 N-6 DNA Methylase SSUBM407_1662 PF12161 HsdM N-terminal domain SSUBM407_1664 PF12008 Type I restriction and modification enzyme - subunit R C terminal SSUBM407_1664 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSUBM407_1664 PF18766 SWI2/SNF2 ATPase SSUBM407_1670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SSUBM407_1671 PF01039 Carboxyl transferase domain SSUBM407_1672 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSUBM407_1672 PF02785 Biotin carboxylase C-terminal domain SSUBM407_1672 PF00289 Biotin carboxylase, N-terminal domain SSUBM407_1673 PF07977 FabA-like domain SSUBM407_1674 PF00364 Biotin-requiring enzyme SSUBM407_1675 PF00109 Beta-ketoacyl synthase, N-terminal domain SSUBM407_1675 PF02801 Beta-ketoacyl synthase, C-terminal domain SSUBM407_1677 PF00698 Acyl transferase domain SSUBM407_1678 PF03060 Nitronate monooxygenase SSUBM407_1679 PF00550 Phosphopantetheine attachment site SSUBM407_1680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SSUBM407_1680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SSUBM407_1682 PF00378 Enoyl-CoA hydratase/isomerase SSUBM407_1683 PF13419 Haloacid dehalogenase-like hydrolase SSUBM407_1684 PF00696 Amino acid kinase family SSUBM407_1684 PF13840 ACT domain SSUBM407_1686 PF00842 Alanine racemase, C-terminal domain SSUBM407_1686 PF01168 Alanine racemase, N-terminal domain SSUBM407_1687 PF01648 4'-phosphopantetheinyl transferase superfamily SSUBM407_1688 PF01043 SecA preprotein cross-linking domain SSUBM407_1688 PF07516 SecA Wing and Scaffold domain SSUBM407_1688 PF07517 SecA DEAD-like domain SSUBM407_1688 PF02810 SEC-C motif SSUBM407_1690 PF00480 ROK family SSUBM407_1691 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUBM407_1691 PF00367 phosphotransferase system, EIIB SSUBM407_1691 PF02378 Phosphotransferase system, EIIC SSUBM407_1692 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSUBM407_1692 PF08244 Glycosyl hydrolases family 32 C terminal SSUBM407_1693 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_1694 PF01029 NusB family SSUBM407_1695 PF03780 Asp23 family, cell envelope-related function SSUBM407_1696 PF08207 Elongation factor P (EF-P) KOW-like domain SSUBM407_1696 PF01132 Elongation factor P (EF-P) OB domain SSUBM407_1696 PF09285 Elongation factor P, C-terminal SSUBM407_1697 PF01321 Creatinase/Prolidase N-terminal domain SSUBM407_1697 PF00557 Metallopeptidase family M24 SSUBM407_1698 PF17755 UvrA DNA-binding domain SSUBM407_1698 PF17760 UvrA interaction domain SSUBM407_1698 PF00005 ABC transporter SSUBM407_1701 PF01084 Ribosomal protein S18 SSUBM407_1702 PF00436 Single-strand binding protein family SSUBM407_1703 PF01250 Ribosomal protein S6 SSUBM407_1704 PF13936 Helix-turn-helix domain SSUBM407_1704 PF00665 Integrase core domain SSUBM407_1705 PF03099 Biotin/lipoate A/B protein ligase family SSUBM407_1705 PF10437 Bacterial lipoate protein ligase C-terminus SSUBM407_1707 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUBM407_1707 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1708 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SSUBM407_1708 PF02817 e3 binding domain SSUBM407_1708 PF00364 Biotin-requiring enzyme SSUBM407_1709 PF00364 Biotin-requiring enzyme SSUBM407_1709 PF02779 Transketolase, pyrimidine binding domain SSUBM407_1709 PF02780 Transketolase, C-terminal domain SSUBM407_1710 PF00676 Dehydrogenase E1 component SSUBM407_1711 PF03458 UPF0126 domain SSUBM407_1712 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 SSUBM407_1714 PF02033 Ribosome-binding factor A SSUBM407_1715 PF00009 Elongation factor Tu GTP binding domain SSUBM407_1715 PF11987 Translation-initiation factor 2 SSUBM407_1715 PF04760 Translation initiation factor IF-2, N-terminal region SSUBM407_1716 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SSUBM407_1717 PF04296 Protein of unknown function (DUF448) SSUBM407_1718 PF13184 NusA-like KH domain SSUBM407_1718 PF08529 NusA N-terminal domain SSUBM407_1718 PF00575 S1 RNA binding domain SSUBM407_1719 PF17384 RimP C-terminal SH3 domain SSUBM407_1719 PF02576 RimP N-terminal domain SSUBM407_1720 PF02390 Putative methyltransferase SSUBM407_1722 PF05975 Bacterial ABC transporter protein EcsB SSUBM407_1723 PF00005 ABC transporter SSUBM407_1724 PF01230 HIT domain SSUBM407_1726 PF03816 Cell envelope-related transcriptional attenuator domain SSUBM407_1728 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SSUBM407_1729 PF13684 Dihydroxyacetone kinase family SSUBM407_1729 PF02734 DAK2 domain SSUBM407_1730 PF03780 Asp23 family, cell envelope-related function SSUBM407_1732 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1733 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1734 PF00005 ABC transporter SSUBM407_1734 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSUBM407_1735 PF00005 ABC transporter SSUBM407_1735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSUBM407_1736 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SSUBM407_1737 PF07943 Penicillin-binding protein 5, C-terminal domain SSUBM407_1737 PF00768 D-alanyl-D-alanine carboxypeptidase SSUBM407_1738 PF01458 Uncharacterized protein family (UPF0051) SSUBM407_1740 PF01592 NifU-like N terminal domain SSUBM407_1741 PF00266 Aminotransferase class-V SSUBM407_1742 PF01458 Uncharacterized protein family (UPF0051) SSUBM407_1743 PF00005 ABC transporter SSUBM407_1744 PF00953 Glycosyl transferase family 4 SSUBM407_1745 PF05389 Negative regulator of genetic competence (MecA) SSUBM407_1746 PF02673 Bacitracin resistance protein BacA SSUBM407_1747 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1748 PF00005 ABC transporter SSUBM407_1751 PF00291 Pyridoxal-phosphate dependent enzyme SSUBM407_1751 PF00585 C-terminal regulatory domain of Threonine dehydratase SSUBM407_1752 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SSUBM407_1752 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SSUBM407_1753 PF10369 Small subunit of acetolactate synthase SSUBM407_1753 PF01842 ACT domain SSUBM407_1754 PF00205 Thiamine pyrophosphate enzyme, central domain SSUBM407_1754 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SSUBM407_1754 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SSUBM407_1758 PF00920 Dehydratase family SSUBM407_1760 PF01883 Iron-sulfur cluster assembly protein SSUBM407_1762 PF00380 Ribosomal protein S9/S16 SSUBM407_1763 PF00572 Ribosomal protein L13 SSUBM407_1765 PF02645 Uncharacterised protein, DegV family COG1307 SSUBM407_1767 PF00588 SpoU rRNA Methylase family SSUBM407_1767 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSUBM407_1772 PF03459 TOBE domain SSUBM407_1772 PF00005 ABC transporter SSUBM407_1772 PF17912 MalK OB fold domain SSUBM407_1773 PF13556 PucR C-terminal helix-turn-helix domain SSUBM407_1774 PF00072 Response regulator receiver domain SSUBM407_1774 PF12833 Helix-turn-helix domain SSUBM407_1775 PF06580 Histidine kinase SSUBM407_1775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUBM407_1775 PF02743 Cache domain SSUBM407_1775 PF00672 HAMP domain SSUBM407_1778 PF12010 Domain of unknown function (DUF3502) SSUBM407_1779 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1780 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1782 PF00480 ROK family SSUBM407_1783 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SSUBM407_1783 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SSUBM407_1783 PF09261 Alpha mannosidase middle domain SSUBM407_1783 PF07748 Glycosyl hydrolases family 38 C-terminal domain SSUBM407_1783 PF01074 Glycosyl hydrolases family 38 N-terminal domain SSUBM407_1787 PF00636 Ribonuclease III domain SSUBM407_1788 PF09190 DALR domain SSUBM407_1788 PF01406 tRNA synthetases class I (C) catalytic domain SSUBM407_1791 PF00132 Bacterial transferase hexapeptide (six repeats) SSUBM407_1792 PF00575 S1 RNA binding domain SSUBM407_1792 PF00013 KH domain SSUBM407_1792 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SSUBM407_1792 PF03725 3' exoribonuclease family, domain 2 SSUBM407_1792 PF01138 3' exoribonuclease family, domain 1 SSUBM407_1795 PF00367 phosphotransferase system, EIIB SSUBM407_1795 PF02378 Phosphotransferase system, EIIC SSUBM407_1796 PF13580 SIS domain SSUBM407_1797 PF01380 SIS domain SSUBM407_1797 PF01418 Helix-turn-helix domain, rpiR family SSUBM407_1798 PF00312 Ribosomal protein S15 SSUBM407_1799 PF00860 Permease family SSUBM407_1802 PF01479 S4 domain SSUBM407_1802 PF00849 RNA pseudouridylate synthase SSUBM407_1806 PF01327 Polypeptide deformylase SSUBM407_1808 PF00694 Aconitase C-terminal domain SSUBM407_1810 PF00180 Isocitrate/isopropylmalate dehydrogenase SSUBM407_1811 PF00682 HMGL-like SSUBM407_1811 PF08502 LeuA allosteric (dimerisation) domain SSUBM407_1813 PF02073 Thermophilic metalloprotease (M29) SSUBM407_1816 PF02811 PHP domain SSUBM407_1816 PF00929 Exonuclease SSUBM407_1816 PF14480 DNA polymerase III polC-type N-terminus I SSUBM407_1816 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSUBM407_1816 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSUBM407_1816 PF11490 DNA polymerase III polC-type N-terminus II SSUBM407_1817 PF02733 Dak1 domain SSUBM407_1819 PF02733 Dak1 domain SSUBM407_1820 PF02734 DAK2 domain SSUBM407_1821 PF03610 PTS system fructose IIA component SSUBM407_1822 PF00230 Major intrinsic protein SSUBM407_1823 PF04073 Aminoacyl-tRNA editing domain SSUBM407_1823 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUBM407_1823 PF03129 Anticodon binding domain SSUBM407_1824 PF13180 PDZ domain SSUBM407_1824 PF02163 Peptidase family M50 SSUBM407_1826 PF01255 Putative undecaprenyl diphosphate synthase SSUBM407_1827 PF02699 Preprotein translocase subunit SSUBM407_1828 PF00709 Adenylosuccinate synthetase SSUBM407_1829 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSUBM407_1829 PF18419 ATP-grasp-like domain SSUBM407_1829 PF04262 Glutamate-cysteine ligase SSUBM407_1831 PF01430 Hsp33 protein SSUBM407_1832 PF01207 Dihydrouridine synthase (Dus) SSUBM407_1835 PF01467 Cytidylyltransferase-like SSUBM407_1836 PF02861 Clp amino terminal domain, pathogenicity island component SSUBM407_1836 PF07724 AAA domain (Cdc48 subfamily) SSUBM407_1836 PF17871 AAA lid domain SSUBM407_1836 PF00004 ATPase family associated with various cellular activities (AAA) SSUBM407_1836 PF10431 C-terminal, D2-small domain, of ClpB protein SSUBM407_1837 PF05848 CtsR N-terminal HTH domain SSUBM407_1837 PF17727 CtsR C-terminal dimerization domain SSUBM407_1840 PF00889 Elongation factor TS SSUBM407_1841 PF00318 Ribosomal protein S2 SSUBM407_1843 PF00746 LPXTG cell wall anchor motif SSUBM407_1843 PF02225 PA domain SSUBM407_1843 PF00082 Subtilase family SSUBM407_1843 PF06280 Fn3-like domain SSUBM407_1844 PF00467 KOW motif SSUBM407_1844 PF02357 Transcription termination factor nusG SSUBM407_1846 PF00471 Ribosomal protein L33 SSUBM407_1847 PF00905 Penicillin binding protein transpeptidase domain SSUBM407_1847 PF00912 Transglycosylase SSUBM407_1848 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUBM407_1849 PF01479 S4 domain SSUBM407_1849 PF00849 RNA pseudouridylate synthase SSUBM407_1850 PF00156 Phosphoribosyl transferase domain SSUBM407_1850 PF09182 Bacterial purine repressor, N-terminal SSUBM407_1852 PF01966 HD domain SSUBM407_1852 PF01336 OB-fold nucleic acid binding domain SSUBM407_1853 PF02646 RmuC family SSUBM407_1854 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SSUBM407_1854 PF04263 Thiamin pyrophosphokinase, catalytic domain SSUBM407_1855 PF00834 Ribulose-phosphate 3 epimerase family SSUBM407_1856 PF16745 RsgA N-terminal domain SSUBM407_1856 PF03193 RsgA GTPase SSUBM407_1857 PF03412 Peptidase C39 family SSUBM407_1857 PF00664 ABC transporter transmembrane region SSUBM407_1857 PF00005 ABC transporter SSUBM407_1863 PF00398 Ribosomal RNA adenine dimethylase SSUBM407_1865 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SSUBM407_1867 PF09297 NADH pyrophosphatase zinc ribbon domain SSUBM407_1867 PF00293 NUDIX domain SSUBM407_1867 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SSUBM407_1871 PF13331 Domain of unknown function (DUF4093) SSUBM407_1872 PF01026 TatD related DNase SSUBM407_1873 PF00468 Ribosomal protein L34 SSUBM407_1874 PF01424 R3H domain SSUBM407_1874 PF14804 Jag N-terminus SSUBM407_1875 PF02096 60Kd inner membrane protein SSUBM407_1876 PF00825 Ribonuclease P SSUBM407_1877 PF00206 Lyase SSUBM407_1877 PF14698 Argininosuccinate lyase C-terminal SSUBM407_1878 PF00764 Arginosuccinate synthase SSUBM407_1880 PF08279 HTH domain SSUBM407_1880 PF02829 3H domain SSUBM407_1883 PF02574 Homocysteine S-methyltransferase SSUBM407_1884 PF00324 Amino acid permease SSUBM407_1885 PF00749 tRNA synthetases class I (E and Q), catalytic domain SSUBM407_1889 PF01987 Mitochondrial biogenesis AIM24 SSUBM407_1890 PF00484 Carbonic anhydrase SSUBM407_1891 PF18073 Rubredoxin metal binding domain SSUBM407_1893 PF00692 dUTPase SSUBM407_1894 PF00005 ABC transporter SSUBM407_1894 PF00664 ABC transporter transmembrane region SSUBM407_1895 PF00664 ABC transporter transmembrane region SSUBM407_1895 PF00005 ABC transporter SSUBM407_1897 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SSUBM407_1897 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SSUBM407_1898 PF00483 Nucleotidyl transferase SSUBM407_1899 PF01694 Rhomboid family SSUBM407_1900 PF01812 5-formyltetrahydrofolate cyclo-ligase family SSUBM407_1901 PF01546 Peptidase family M20/M25/M40 SSUBM407_1901 PF07687 Peptidase dimerisation domain SSUBM407_1902 PF14602 Hexapeptide repeat of succinyl-transferase SSUBM407_1902 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SSUBM407_1902 PF00132 Bacterial transferase hexapeptide (six repeats) SSUBM407_1905 PF00149 Calcineurin-like phosphoesterase SSUBM407_1906 PF00342 Phosphoglucose isomerase SSUBM407_1908 PF14437 MafB19-like deaminase SSUBM407_1909 PF02779 Transketolase, pyrimidine binding domain SSUBM407_1909 PF02780 Transketolase, C-terminal domain SSUBM407_1909 PF00456 Transketolase, thiamine diphosphate binding domain SSUBM407_1913 PF00596 Class II Aldolase and Adducin N-terminal domain SSUBM407_1914 PF01261 Xylose isomerase-like TIM barrel SSUBM407_1915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSUBM407_1916 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUBM407_1917 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_1918 PF03611 PTS system sugar-specific permease component SSUBM407_1919 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUBM407_1919 PF17999 Pullulanase N1-terminal domain SSUBM407_1919 PF00128 Alpha amylase, catalytic domain SSUBM407_1920 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_1921 PF00005 ABC transporter SSUBM407_1922 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1923 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUBM407_1924 PF01476 LysM domain SSUBM407_1924 PF05257 CHAP domain SSUBM407_1925 PF02378 Phosphotransferase system, EIIC SSUBM407_1927 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUBM407_1928 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUBM407_1929 PF08279 HTH domain SSUBM407_1929 PF00874 PRD domain SSUBM407_1929 PF05043 Mga helix-turn-helix domain SSUBM407_1929 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUBM407_1931 PF00232 Glycosyl hydrolase family 1 SSUBM407_1932 PF11975 Family 4 glycosyl hydrolase C-terminal domain SSUBM407_1932 PF02056 Family 4 glycosyl hydrolase SSUBM407_1933 PF08264 Anticodon-binding domain of tRNA SSUBM407_1933 PF00133 tRNA synthetases class I (I, L, M and V) SSUBM407_1933 PF13603 Leucyl-tRNA synthetase, Domain 2 SSUBM407_1933 PF09334 tRNA synthetases class I (M) SSUBM407_1934 PF01431 Peptidase family M13 SSUBM407_1934 PF05649 Peptidase family M13 SSUBM407_1935 PF00950 ABC 3 transport family SSUBM407_1936 PF00950 ABC 3 transport family SSUBM407_1937 PF00005 ABC transporter SSUBM407_1939 PF01297 Zinc-uptake complex component A periplasmic SSUBM407_1947 PF02580 D-Tyr-tRNA(Tyr) deacylase SSUBM407_1948 PF04607 Region found in RelA / SpoT proteins SSUBM407_1948 PF02824 TGS domain SSUBM407_1948 PF13291 ACT domain SSUBM407_1949 PF02872 5'-nucleotidase, C-terminal domain SSUBM407_1949 PF00149 Calcineurin-like phosphoesterase SSUBM407_1958 PF04452 RNA methyltransferase SSUBM407_1963 PF16193 AAA C-terminal domain SSUBM407_1963 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSUBM407_1963 PF12002 MgsA AAA+ ATPase C terminal SSUBM407_1966 PF02872 5'-nucleotidase, C-terminal domain SSUBM407_1966 PF00149 Calcineurin-like phosphoesterase SSUBM407_1968 PF03477 ATP cone domain SSUBM407_1968 PF13597 Anaerobic ribonucleoside-triphosphate reductase SSUBM407_1972 PF04397 LytTr DNA-binding domain SSUBM407_1973 PF05192 MutS domain III SSUBM407_1973 PF05188 MutS domain II SSUBM407_1973 PF00488 MutS domain V SSUBM407_1973 PF01624 MutS domain I SSUBM407_1973 PF05190 MutS family domain IV SSUBM407_1974 PF02863 Arginine repressor, C-terminal domain SSUBM407_1974 PF01316 Arginine repressor, DNA binding domain SSUBM407_1975 PF03485 Arginyl tRNA synthetase N terminal domain SSUBM407_1975 PF05746 DALR anticodon binding domain SSUBM407_1975 PF00750 tRNA synthetases class I (R) SSUBM407_1979 PF02446 4-alpha-glucanotransferase SSUBM407_1980 PF13416 Bacterial extracellular solute-binding protein SSUBM407_1980d PF13416 Bacterial extracellular solute-binding protein SSUBM407_1981 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1982 PF00528 Binding-protein-dependent transport system inner membrane component SSUBM407_1984 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SSUBM407_1984 PF00356 Bacterial regulatory proteins, lacI family SSUBM407_1985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUBM407_1985 PF17999 Pullulanase N1-terminal domain SSUBM407_1985 PF00128 Alpha amylase, catalytic domain SSUBM407_1986 PF07972 NrdI Flavodoxin like SSUBM407_1987 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUBM407_1987 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUBM407_1988 PF00152 tRNA synthetases class II (D, K and N) SSUBM407_1988 PF01336 OB-fold nucleic acid binding domain SSUBM407_1988 PF02938 GAD domain SSUBM407_1989 PF13673 Acetyltransferase (GNAT) domain SSUBM407_1990 PF00248 Aldo/keto reductase family SSUBM407_1991 PF00535 Glycosyl transferase family 2 SSUBM407_1992 PF01915 Glycosyl hydrolase family 3 C-terminal domain SSUBM407_1992 PF14310 Fibronectin type III-like domain SSUBM407_1992 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUBM407_1994 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUBM407_1994 PF14310 Fibronectin type III-like domain SSUBM407_1994 PF01915 Glycosyl hydrolase family 3 C-terminal domain SSUBM407_1995 PF01339 CheB methylesterase SSUBM407_1995 PF00072 Response regulator receiver domain SSUBM407_1998 PF14537 Cytochrome c3 SSUBM407_1998 PF00890 FAD binding domain SSUBM407_2000 PF01479 S4 domain SSUBM407_2000 PF00163 Ribosomal protein S4/S9 N-terminal domain SSUBM407_2003 PF00772 DnaB-like helicase N terminal domain SSUBM407_2003 PF03796 DnaB-like helicase C terminal domain SSUBM407_2004 PF03948 Ribosomal protein L9, C-terminal domain SSUBM407_2004 PF01281 Ribosomal protein L9, N-terminal domain SSUBM407_2005 PF01368 DHH family SSUBM407_2005 PF02272 DHHA1 domain SSUBM407_2006 PF13932 GidA associated domain SSUBM407_2006 PF01134 Glucose inhibited division protein A SSUBM407_2008 PF00293 NUDIX domain SSUBM407_2009 PF00293 NUDIX domain SSUBM407_2010 PF01638 HxlR-like helix-turn-helix SSUBM407_2013 PF03315 Serine dehydratase beta chain SSUBM407_2013 PF01842 ACT domain SSUBM407_2014 PF03313 Serine dehydratase alpha chain SSUBM407_2016 PF02361 Cobalt transport protein SSUBM407_2017 PF00005 ABC transporter SSUBM407_2018 PF00005 ABC transporter SSUBM407_2019 PF01066 CDP-alcohol phosphatidyltransferase SSUBM407_2020 PF13464 Domain of unknown function (DUF4115) SSUBM407_2021 PF05193 Peptidase M16 inactive domain SSUBM407_2021 PF00675 Insulinase (Peptidase family M16) SSUBM407_2022 PF05193 Peptidase M16 inactive domain SSUBM407_2024 PF02463 RecF/RecN/SMC N terminal domain SSUBM407_2025 PF00571 CBS domain SSUBM407_2025 PF00478 IMP dehydrogenase / GMP reductase domain SSUBM407_2026 PF00579 tRNA synthetases class I (W and Y) SSUBM407_2027 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUBM407_2027 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUBM407_2028 PF12848 ABC transporter SSUBM407_2028 PF00005 ABC transporter SSUBM407_2031 PF02590 Predicted SPOUT methyltransferase SSUBM407_2032 PF13180 PDZ domain SSUBM407_2033 PF02195 ParB-like nuclease domain SSUBM407_2033 PF17762 HTH domain found in ParB protein SSUBM407_p002 PF00308 Bacterial dnaA protein SSUBM407_p002 PF08299 Bacterial dnaA protein helix-turn-helix