locus-tag class description CR541_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CR541_RS00005 PF00308 Bacterial dnaA protein CR541_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CR541_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CR541_RS00010 PF02767 DNA polymerase III beta subunit, central domain CR541_RS00025 PF01381 Helix-turn-helix CR541_RS00030 PF01926 50S ribosome-binding GTPase CR541_RS00030 PF06071 Protein of unknown function (DUF933) CR541_RS00035 PF01195 Peptidyl-tRNA hydrolase CR541_RS00040 PF02559 CarD-like/TRCF domain CR541_RS00040 PF17757 UvrB interaction domain CR541_RS00040 PF00271 Helicase conserved C-terminal domain CR541_RS00040 PF03461 TRCF domain CR541_RS00040 PF00270 DEAD/DEAH box helicase CR541_RS00045 PF01479 S4 domain CR541_RS00065 PF01171 PP-loop family CR541_RS00070 PF00156 Phosphoribosyl transferase domain CR541_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) CR541_RS00075 PF17862 AAA+ lid domain CR541_RS00075 PF06480 FtsH Extracellular CR541_RS00075 PF01434 Peptidase family M41 CR541_RS00190 PF04085 rod shape-determining protein MreC CR541_RS00205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CR541_RS00205 PF14572 Phosphoribosyl synthetase-associated domain CR541_RS00210 PF00155 Aminotransferase class I and II CR541_RS00215 PF02565 Recombination protein O C terminal CR541_RS00215 PF11967 Recombination protein O N terminal CR541_RS00220 PF02504 Fatty acid synthesis protein CR541_RS00225 PF00550 Phosphopantetheine attachment site CR541_RS00230 PF01259 SAICAR synthetase CR541_RS00235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CR541_RS00235 PF02769 AIR synthase related protein, C-terminal domain CR541_RS00235 PF00586 AIR synthase related protein, N-terminal domain CR541_RS00240 PF00156 Phosphoribosyl transferase domain CR541_RS00240 PF13537 Glutamine amidotransferase domain CR541_RS00245 PF00586 AIR synthase related protein, N-terminal domain CR541_RS00245 PF02769 AIR synthase related protein, C-terminal domain CR541_RS00250 PF00551 Formyl transferase CR541_RS00255 PF01808 AICARFT/IMPCHase bienzyme CR541_RS00255 PF02142 MGS-like domain CR541_RS00260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CR541_RS00260 PF02844 Phosphoribosylglycinamide synthetase, N domain CR541_RS00260 PF02843 Phosphoribosylglycinamide synthetase, C domain CR541_RS00265 PF00731 AIR carboxylase CR541_RS00270 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CR541_RS00270 PF02222 ATP-grasp domain CR541_RS00285 PF10397 Adenylosuccinate lyase C-terminus CR541_RS00285 PF00206 Lyase CR541_RS00310 PF00005 ABC transporter CR541_RS00320 PF00005 ABC transporter CR541_RS00320 PF00664 ABC transporter transmembrane region CR541_RS00325 PF17864 RuvB AAA lid domain CR541_RS00325 PF05491 RuvB C-terminal winged helix domain CR541_RS00325 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR541_RS00335 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS00360 PF02875 Mur ligase family, glutamate ligase domain CR541_RS00360 PF08245 Mur ligase middle domain CR541_RS00375 PF01119 DNA mismatch repair protein, C-terminal domain CR541_RS00375 PF08676 MutL C terminal dimerisation domain CR541_RS00380 PF01330 RuvA N terminal domain CR541_RS00380 PF07499 RuvA, C-terminal domain CR541_RS00395 PF13673 Acetyltransferase (GNAT) domain CR541_RS00395 PF13302 Acetyltransferase (GNAT) domain CR541_RS00395 PF03352 Methyladenine glycosylase CR541_RS00395 PF00117 Glutamine amidotransferase class-I CR541_RS00395 PF00958 GMP synthase C terminal domain CR541_RS00400 PF02464 Competence-damaged protein CR541_RS00400 PF18146 Damage-inducible protein CinA KH domain CR541_RS00400 PF00994 Probable molybdopterin binding domain CR541_RS00405 PF00154 recA bacterial DNA recombination protein CR541_RS00410 PF03960 ArsC family CR541_RS00415 PF06135 IreB regulatory phosphoprotein CR541_RS00420 PF03652 Holliday junction resolvase CR541_RS00425 PF06949 Protein of unknown function (DUF1292) CR541_RS00440 PF00338 Ribosomal protein S10p/S20e CR541_RS00445 PF00297 Ribosomal protein L3 CR541_RS00450 PF00573 Ribosomal protein L4/L1 family CR541_RS00455 PF00276 Ribosomal protein L23 CR541_RS00460 PF00181 Ribosomal Proteins L2, RNA binding domain CR541_RS00460 PF03947 Ribosomal Proteins L2, C-terminal domain CR541_RS00465 PF00203 Ribosomal protein S19 CR541_RS00470 PF00237 Ribosomal protein L22p/L17e CR541_RS00475 PF00189 Ribosomal protein S3, C-terminal domain CR541_RS00475 PF07650 KH domain CR541_RS00480 PF00252 Ribosomal protein L16p/L10e CR541_RS00485 PF00831 Ribosomal L29 protein CR541_RS00490 PF00366 Ribosomal protein S17 CR541_RS00495 PF00238 Ribosomal protein L14p/L23e CR541_RS00500 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CR541_RS00500 PF00467 KOW motif CR541_RS00505 PF00281 Ribosomal protein L5 CR541_RS00505 PF00673 ribosomal L5P family C-terminus CR541_RS00510 PF00253 Ribosomal protein S14p/S29e CR541_RS00520 PF00410 Ribosomal protein S8 CR541_RS00530 PF00347 Ribosomal protein L6 CR541_RS00535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CR541_RS00540 PF00333 Ribosomal protein S5, N-terminal domain CR541_RS00540 PF03719 Ribosomal protein S5, C-terminal domain CR541_RS00545 PF00327 Ribosomal protein L30p/L7e CR541_RS00550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CR541_RS00555 PF00344 SecY translocase CR541_RS00565 PF01176 Translation initiation factor 1A / IF-1 CR541_RS00570 PF00444 Ribosomal protein L36 CR541_RS00575 PF00416 Ribosomal protein S13/S18 CR541_RS00580 PF00411 Ribosomal protein S11 CR541_RS00585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CR541_RS00585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CR541_RS00585 PF01000 RNA polymerase Rpb3/RpoA insert domain CR541_RS00590 PF01196 Ribosomal protein L17 CR541_RS00675 PF14659 Phage integrase, N-terminal SAM-like domain CR541_RS00675 PF00589 Phage integrase family CR541_RS00685 PF18106 Rolling Circle replication initiation protein N-terminal domain CR541_RS00685 PF02486 Replication initiation factor CR541_RS00725 PF01047 MarR family CR541_RS00730 PF00005 ABC transporter CR541_RS00735 PF00950 ABC 3 transport family CR541_RS00740 PF01297 Zinc-uptake complex component A periplasmic CR541_RS00740 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CR541_RS00745 PF03965 Penicillinase repressor CR541_RS00765 PF01479 S4 domain CR541_RS00765 PF00579 tRNA synthetases class I (W and Y) CR541_RS00770 PF00905 Penicillin binding protein transpeptidase domain CR541_RS00770 PF00912 Transglycosylase CR541_RS00775 PF00562 RNA polymerase Rpb2, domain 6 CR541_RS00775 PF04560 RNA polymerase Rpb2, domain 7 CR541_RS00775 PF10385 RNA polymerase beta subunit external 1 domain CR541_RS00775 PF04565 RNA polymerase Rpb2, domain 3 CR541_RS00775 PF04561 RNA polymerase Rpb2, domain 2 CR541_RS00775 PF04563 RNA polymerase beta subunit CR541_RS00780 PF04998 RNA polymerase Rpb1, domain 5 CR541_RS00780 PF04983 RNA polymerase Rpb1, domain 3 CR541_RS00780 PF05000 RNA polymerase Rpb1, domain 4 CR541_RS00780 PF04997 RNA polymerase Rpb1, domain 1 CR541_RS00780 PF00623 RNA polymerase Rpb1, domain 2 CR541_RS00795 PF00437 Type II/IV secretion system protein CR541_RS00800 PF00482 Type II secretion system (T2SS), protein F CR541_RS00805 PF07963 Prokaryotic N-terminal methylation motif CR541_RS00835 PF00871 Acetokinase family CR541_RS00840 PF07155 ECF-type riboflavin transporter, S component CR541_RS00845 PF08245 Mur ligase middle domain CR541_RS00845 PF02875 Mur ligase family, glutamate ligase domain CR541_RS00850 PF05343 M42 glutamyl aminopeptidase CR541_RS00865 PF00085 Thioredoxin CR541_RS00875 PF01588 Putative tRNA binding domain CR541_RS00875 PF14794 Domain of unknown function (DUF4479) CR541_RS00885 PF00436 Single-strand binding protein family CR541_RS00895 PF00166 Chaperonin 10 Kd subunit CR541_RS00900 PF00118 TCP-1/cpn60 chaperonin family CR541_RS00905 PF00164 Ribosomal protein S12/S23 CR541_RS00910 PF00177 Ribosomal protein S7p/S5e CR541_RS00915 PF00679 Elongation factor G C-terminus CR541_RS00915 PF14492 Elongation Factor G, domain II CR541_RS00915 PF03144 Elongation factor Tu domain 2 CR541_RS00915 PF00009 Elongation factor Tu GTP binding domain CR541_RS00915 PF03764 Elongation factor G, domain IV CR541_RS00925 PF01431 Peptidase family M13 CR541_RS00925 PF05649 Peptidase family M13 CR541_RS00930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CR541_RS00930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CR541_RS00935 PF00162 Phosphoglycerate kinase CR541_RS00940 PF06081 Aromatic acid exporter family member 1 CR541_RS00945 PF13411 MerR HTH family regulatory protein CR541_RS00950 PF00120 Glutamine synthetase, catalytic domain CR541_RS00950 PF03951 Glutamine synthetase, beta-Grasp domain CR541_RS00955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CR541_RS00955 PF00753 Metallo-beta-lactamase superfamily CR541_RS00955 PF17770 Ribonuclease J C-terminal domain CR541_RS00960 PF07288 Protein of unknown function (DUF1447) CR541_RS00965 PF00814 Glycoprotease family CR541_RS00975 PF00814 Glycoprotease family CR541_RS00980 PF12833 Helix-turn-helix domain CR541_RS00980 PF02311 AraC-like ligand binding domain CR541_RS00985 PF01547 Bacterial extracellular solute-binding protein CR541_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS01000 PF16875 Glycosyl hydrolase family 36 N-terminal domain CR541_RS01000 PF16874 Glycosyl hydrolase family 36 C-terminal domain CR541_RS01015 PF03601 Conserved hypothetical protein 698 CR541_RS01040 PF00005 ABC transporter CR541_RS01040 PF13732 Domain of unknown function (DUF4162) CR541_RS01050 PF00232 Glycosyl hydrolase family 1 CR541_RS01055 PF08279 HTH domain CR541_RS01055 PF04394 Protein of unknown function, DUF536 CR541_RS01060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR541_RS01065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS01070 PF03611 PTS system sugar-specific permease component CR541_RS01075 PF00456 Transketolase, thiamine diphosphate binding domain CR541_RS01080 PF02780 Transketolase, C-terminal domain CR541_RS01080 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CR541_RS01080 PF02779 Transketolase, pyrimidine binding domain CR541_RS01085 PF03009 Glycerophosphoryl diester phosphodiesterase family CR541_RS01090 PF02575 YbaB/EbfC DNA-binding family CR541_RS01095 PF01380 SIS domain CR541_RS01110 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CR541_RS01110 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CR541_RS01110 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CR541_RS01125 PF01228 Glycine radical CR541_RS01125 PF02901 Pyruvate formate lyase-like CR541_RS01130 PF11799 impB/mucB/samB family C-terminal domain CR541_RS01130 PF00817 impB/mucB/samB family CR541_RS01130 PF11798 IMS family HHH motif CR541_RS01140 PF13460 NAD(P)H-binding CR541_RS01145 PF00294 pfkB family carbohydrate kinase CR541_RS01160 PF00480 ROK family CR541_RS01165 PF02378 Phosphotransferase system, EIIC CR541_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS01190 PF00005 ABC transporter CR541_RS01200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CR541_RS01205 PF00403 Heavy-metal-associated domain CR541_RS01210 PF00403 Heavy-metal-associated domain CR541_RS01215 PF00403 Heavy-metal-associated domain CR541_RS01220 PF13538 UvrD-like helicase C-terminal domain CR541_RS01220 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CR541_RS01220 PF14490 Helix-hairpin-helix containing domain CR541_RS01225 PF10502 Signal peptidase, peptidase S26 CR541_RS01230 PF11858 Domain of unknown function (DUF3378) CR541_RS01230 PF01351 Ribonuclease HII CR541_RS01235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CR541_RS01235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CR541_RS01250 PF16657 Maltogenic Amylase, C-terminal domain CR541_RS01250 PF00128 Alpha amylase, catalytic domain CR541_RS01255 PF02378 Phosphotransferase system, EIIC CR541_RS01255 PF00367 phosphotransferase system, EIIB CR541_RS01260 PF00392 Bacterial regulatory proteins, gntR family CR541_RS01260 PF07702 UTRA domain CR541_RS01275 PF00488 MutS domain V CR541_RS01275 PF01713 Smr domain CR541_RS01285 PF00085 Thioredoxin CR541_RS01290 PF00501 AMP-binding enzyme CR541_RS01290 PF13193 AMP-binding enzyme C-terminal domain CR541_RS01295 PF01625 Peptide methionine sulfoxide reductase CR541_RS01295 PF01641 SelR domain CR541_RS01315 PF00005 ABC transporter CR541_RS01315 PF02687 FtsX-like permease family CR541_RS01315 PF12704 MacB-like periplasmic core domain CR541_RS01320 PF01235 Sodium:alanine symporter family CR541_RS01325 PF00924 Mechanosensitive ion channel CR541_RS01340 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CR541_RS01340 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CR541_RS01345 PF01180 Dihydroorotate dehydrogenase CR541_RS01350 PF09587 Bacterial capsule synthesis protein PGA_cap CR541_RS01370 PF00005 ABC transporter CR541_RS01375 PF00440 Bacterial regulatory proteins, tetR family CR541_RS01400 PF03788 LrgA family CR541_RS01405 PF04172 LrgB-like family CR541_RS01410 PF01226 Formate/nitrite transporter CR541_RS01415 PF00230 Major intrinsic protein CR541_RS01420 PF05872 Bacterial protein of unknown function (DUF853) CR541_RS01425 PF00293 NUDIX domain CR541_RS01450 PF00471 Ribosomal protein L33 CR541_RS01455 PF01783 Ribosomal L32p protein family CR541_RS01460 PF03129 Anticodon binding domain CR541_RS01460 PF13393 Histidyl-tRNA synthetase CR541_RS01465 PF08240 Alcohol dehydrogenase GroES-like domain CR541_RS01465 PF00107 Zinc-binding dehydrogenase CR541_RS01470 PF00171 Aldehyde dehydrogenase family CR541_RS01470 PF00465 Iron-containing alcohol dehydrogenase CR541_RS01475 PF14821 Threonine synthase N terminus CR541_RS01475 PF00291 Pyridoxal-phosphate dependent enzyme CR541_RS01480 PF00005 ABC transporter CR541_RS01480 PF00664 ABC transporter transmembrane region CR541_RS01485 PF00664 ABC transporter transmembrane region CR541_RS01485 PF00005 ABC transporter CR541_RS01500 PF00005 ABC transporter CR541_RS01505 PF01554 MatE CR541_RS01510 PF10509 Galactokinase galactose-binding signature CR541_RS01510 PF08544 GHMP kinases C terminal CR541_RS01510 PF00288 GHMP kinases N terminal domain CR541_RS01520 PF08544 GHMP kinases C terminal CR541_RS01520 PF00288 GHMP kinases N terminal domain CR541_RS01525 PF01070 FMN-dependent dehydrogenase CR541_RS01530 PF00664 ABC transporter transmembrane region CR541_RS01530 PF00005 ABC transporter CR541_RS01535 PF00664 ABC transporter transmembrane region CR541_RS01535 PF00005 ABC transporter CR541_RS01545 PF05167 Uncharacterised ACR (DUF711) CR541_RS01550 PF00300 Histidine phosphatase superfamily (branch 1) CR541_RS01555 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CR541_RS01555 PF01628 HrcA protein C terminal domain CR541_RS01560 PF01025 GrpE CR541_RS01565 PF00012 Hsp70 protein CR541_RS01570 PF01556 DnaJ C terminal domain CR541_RS01570 PF00684 DnaJ central domain CR541_RS01570 PF00226 DnaJ domain CR541_RS01580 PF03099 Biotin/lipoate A/B protein ligase family CR541_RS01585 PF01425 Amidase CR541_RS01590 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS01600 PF13443 Cro/C1-type HTH DNA-binding domain CR541_RS01615 PF01475 Ferric uptake regulator family CR541_RS01620 PF01416 tRNA pseudouridine synthase CR541_RS01635 PF04260 Protein of unknown function (DUF436) CR541_RS01660 PF12697 Alpha/beta hydrolase family CR541_RS01665 PF00106 short chain dehydrogenase CR541_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS01670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CR541_RS01675 PF02082 Transcriptional regulator CR541_RS01710 PF05697 Bacterial trigger factor protein (TF) CR541_RS01710 PF05698 Bacterial trigger factor protein (TF) C-terminus CR541_RS01710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CR541_RS01730 PF05066 HB1, ASXL, restriction endonuclease HTH domain CR541_RS01735 PF06418 CTP synthase N-terminus CR541_RS01735 PF00117 Glutamine amidotransferase class-I CR541_RS01745 PF01116 Fructose-bisphosphate aldolase class-II CR541_RS01750 PF00830 Ribosomal L28 family CR541_RS01785 PF00270 DEAD/DEAH box helicase CR541_RS01785 PF17191 RecG wedge domain CR541_RS01785 PF00271 Helicase conserved C-terminal domain CR541_RS01790 PF00710 Asparaginase, N-terminal CR541_RS01790 PF17763 Glutaminase/Asparaginase C-terminal domain CR541_RS01795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR541_RS01805 PF00582 Universal stress protein family CR541_RS01810 PF00155 Aminotransferase class I and II CR541_RS01815 PF06018 CodY GAF-like domain CR541_RS01815 PF08222 CodY helix-turn-helix domain CR541_RS01820 PF00857 Isochorismatase family CR541_RS01825 PF01245 Ribosomal protein L19 CR541_RS01835 PF02686 Glu-tRNAGln amidotransferase C subunit CR541_RS01840 PF01425 Amidase CR541_RS01845 PF02637 GatB domain CR541_RS01845 PF02934 GatB/GatE catalytic domain CR541_RS01850 PF01966 HD domain CR541_RS01850 PF13286 Phosphohydrolase-associated domain CR541_RS01855 PF00356 Bacterial regulatory proteins, lacI family CR541_RS01860 PF08544 GHMP kinases C terminal CR541_RS01860 PF10509 Galactokinase galactose-binding signature CR541_RS01860 PF00288 GHMP kinases N terminal domain CR541_RS01865 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CR541_RS01865 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CR541_RS01870 PF00892 EamA-like transporter family CR541_RS01875 PF03932 CutC family CR541_RS01885 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS01890 PF01926 50S ribosome-binding GTPase CR541_RS01900 PF01985 CRS1 / YhbY (CRM) domain CR541_RS01905 PF01467 Cytidylyltransferase-like CR541_RS01910 PF01966 HD domain CR541_RS01940 PF13649 Methyltransferase domain CR541_RS01945 PF07693 KAP family P-loop domain CR541_RS01950 PF05636 HIGH Nucleotidyl Transferase CR541_RS01955 PF13411 MerR HTH family regulatory protein CR541_RS01955 PF07739 TipAS antibiotic-recognition domain CR541_RS01960 PF00350 Dynamin family CR541_RS01980 PF01327 Polypeptide deformylase CR541_RS01985 PF10431 C-terminal, D2-small domain, of ClpB protein CR541_RS01985 PF00004 ATPase family associated with various cellular activities (AAA) CR541_RS01985 PF07724 AAA domain (Cdc48 subfamily) CR541_RS01985 PF17871 AAA lid domain CR541_RS01990 PF02446 4-alpha-glucanotransferase CR541_RS01995 PF00343 Carbohydrate phosphorylase CR541_RS02005 PF03372 Endonuclease/Exonuclease/phosphatase family CR541_RS02010 PF00367 phosphotransferase system, EIIB CR541_RS02010 PF02378 Phosphotransferase system, EIIC CR541_RS02010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR541_RS02025 PF01709 Transcriptional regulator CR541_RS02035 PF07155 ECF-type riboflavin transporter, S component CR541_RS02045 PF00581 Rhodanese-like domain CR541_RS02045 PF17773 UPF0176 acylphosphatase like domain CR541_RS02045 PF12368 Rhodanase C-terminal CR541_RS02055 PF00005 ABC transporter CR541_RS02055 PF12558 ATP-binding cassette cobalt transporter CR541_RS02065 PF00313 'Cold-shock' DNA-binding domain CR541_RS02070 PF02527 rRNA small subunit methyltransferase G CR541_RS02075 PF00912 Transglycosylase CR541_RS02075 PF00905 Penicillin binding protein transpeptidase domain CR541_RS02080 PF03838 Recombination protein U CR541_RS02085 PF06908 YspA SLOG family CR541_RS02090 PF05103 DivIVA protein CR541_RS02100 PF01170 Putative RNA methylase family UPF0020 CR541_RS02100 PF02926 THUMP domain CR541_RS02105 PF18708 MapZ extracellular C-terminal domain 2 CR541_RS02105 PF18041 MapZ extracellular domain 1 CR541_RS02110 PF02664 S-Ribosylhomocysteinase (LuxS) CR541_RS02115 PF12072 Domain of unknown function (DUF3552) CR541_RS02115 PF01966 HD domain CR541_RS02115 PF00013 KH domain CR541_RS02120 PF00625 Guanylate kinase CR541_RS02125 PF01192 RNA polymerase Rpb6 CR541_RS02130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CR541_RS02130 PF17764 3′ DNA-binding domain (3′BD) CR541_RS02130 PF04851 Type III restriction enzyme, res subunit CR541_RS02130 PF18074 Primosomal protein N C-terminal domain CR541_RS02130 PF00271 Helicase conserved C-terminal domain CR541_RS02135 PF00551 Formyl transferase CR541_RS02135 PF02911 Formyl transferase, C-terminal domain CR541_RS02140 PF01029 NusB family CR541_RS02140 PF01189 16S rRNA methyltransferase RsmB/F CR541_RS02150 PF00069 Protein kinase domain CR541_RS02150 PF03793 PASTA domain CR541_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS02160 PF07730 Histidine kinase CR541_RS02165 PF00196 Bacterial regulatory proteins, luxR family CR541_RS02165 PF00072 Response regulator receiver domain CR541_RS02170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR541_RS02175 PF00575 S1 RNA binding domain CR541_RS02180 PF00291 Pyridoxal-phosphate dependent enzyme CR541_RS02185 PF01205 Uncharacterized protein family UPF0029 CR541_RS02185 PF09186 Domain of unknown function (DUF1949) CR541_RS02190 PF04851 Type III restriction enzyme, res subunit CR541_RS02190 PF00271 Helicase conserved C-terminal domain CR541_RS02200 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CR541_RS02200 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CR541_RS02270 PF05958 tRNA (Uracil-5-)-methyltransferase CR541_RS02270 PF01938 TRAM domain CR541_RS02275 PF02631 RecX family CR541_RS02280 PF04167 Protein of unknown function (DUF402) CR541_RS02290 PF07702 UTRA domain CR541_RS02290 PF00392 Bacterial regulatory proteins, gntR family CR541_RS02295 PF07702 UTRA domain CR541_RS02295 PF00392 Bacterial regulatory proteins, gntR family CR541_RS02300 PF01301 Glycosyl hydrolases family 35 CR541_RS02305 PF03830 PTS system sorbose subfamily IIB component CR541_RS02315 PF03613 PTS system mannose/fructose/sorbose family IID component CR541_RS02325 PF01263 Aldose 1-epimerase CR541_RS02350 PF10458 Valyl tRNA synthetase tRNA binding arm CR541_RS02350 PF08264 Anticodon-binding domain of tRNA CR541_RS02350 PF00133 tRNA synthetases class I (I, L, M and V) CR541_RS02360 PF02661 Fic/DOC family CR541_RS02360 PF17841 BID domain of Bartonella effector protein (Bep) CR541_RS02385 PF03590 Aspartate-ammonia ligase CR541_RS02390 PF03144 Elongation factor Tu domain 2 CR541_RS02390 PF14492 Elongation Factor G, domain II CR541_RS02390 PF00009 Elongation factor Tu GTP binding domain CR541_RS02390 PF00679 Elongation factor G C-terminus CR541_RS02405 PF10502 Signal peptidase, peptidase S26 CR541_RS02415 PF07581 The GLUG motif CR541_RS02415 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CR541_RS02435 PF08245 Mur ligase middle domain CR541_RS02435 PF02875 Mur ligase family, glutamate ligase domain CR541_RS02440 PF04101 Glycosyltransferase family 28 C-terminal domain CR541_RS02440 PF03033 Glycosyltransferase family 28 N-terminal domain CR541_RS02445 PF08478 POTRA domain, FtsQ-type CR541_RS02450 PF02491 SHS2 domain inserted in FTSA CR541_RS02450 PF11983 Membrane-attachment and polymerisation-promoting switch CR541_RS02455 PF00091 Tubulin/FtsZ family, GTPase domain CR541_RS02455 PF12327 FtsZ family, C-terminal domain CR541_RS02460 PF01168 Alanine racemase, N-terminal domain CR541_RS02465 PF04472 Cell division protein SepF CR541_RS02480 PF05103 DivIVA protein CR541_RS02490 PF00133 tRNA synthetases class I (I, L, M and V) CR541_RS02490 PF08264 Anticodon-binding domain of tRNA CR541_RS02500 PF00300 Histidine phosphatase superfamily (branch 1) CR541_RS02500 PF00293 NUDIX domain CR541_RS02505 PF10431 C-terminal, D2-small domain, of ClpB protein CR541_RS02505 PF07724 AAA domain (Cdc48 subfamily) CR541_RS02505 PF00004 ATPase family associated with various cellular activities (AAA) CR541_RS02505 PF17871 AAA lid domain CR541_RS02510 PF08796 Protein of unknown function (DUF1797) CR541_RS02515 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS02520 PF00005 ABC transporter CR541_RS02525 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CR541_RS02525 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CR541_RS02540 PF10502 Signal peptidase, peptidase S26 CR541_RS02565 PF13411 MerR HTH family regulatory protein CR541_RS02580 PF16325 Peptidase family U32 C-terminal domain CR541_RS02580 PF01136 Peptidase family U32 CR541_RS02595 PF02229 Transcriptional Coactivator p15 (PC4) CR541_RS02600 PF02632 BioY family CR541_RS02605 PF04199 Putative cyclase CR541_RS02610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS02615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CR541_RS02620 PF00005 ABC transporter CR541_RS02625 PF12704 MacB-like periplasmic core domain CR541_RS02625 PF02687 FtsX-like permease family CR541_RS02640 PF00152 tRNA synthetases class II (D, K and N) CR541_RS02640 PF01336 OB-fold nucleic acid binding domain CR541_RS02650 PF04073 Aminoacyl-tRNA editing domain CR541_RS02660 PF09515 Thiamine transporter protein (Thia_YuaJ) CR541_RS02680 PF01098 Cell cycle protein CR541_RS02685 PF00311 Phosphoenolpyruvate carboxylase CR541_RS02690 PF08281 Sigma-70, region 4 CR541_RS02690 PF04542 Sigma-70 region 2 CR541_RS02700 PF00009 Elongation factor Tu GTP binding domain CR541_RS02700 PF03144 Elongation factor Tu domain 2 CR541_RS02700 PF03143 Elongation factor Tu C-terminal domain CR541_RS02705 PF00121 Triosephosphate isomerase CR541_RS02715 PF01966 HD domain CR541_RS02730 PF00665 Integrase core domain CR541_RS02730 PF13936 Helix-turn-helix domain CR541_RS02735 PF00962 Adenosine/AMP deaminase CR541_RS02745 PF00005 ABC transporter CR541_RS02750 PF00392 Bacterial regulatory proteins, gntR family CR541_RS02750 PF07702 UTRA domain CR541_RS02755 PF07733 Bacterial DNA polymerase III alpha NTPase domain CR541_RS02755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CR541_RS02755 PF02811 PHP domain CR541_RS02755 PF14579 Helix-hairpin-helix motif CR541_RS02755 PF01336 OB-fold nucleic acid binding domain CR541_RS02760 PF00365 Phosphofructokinase CR541_RS02765 PF00224 Pyruvate kinase, barrel domain CR541_RS02765 PF02887 Pyruvate kinase, alpha/beta domain CR541_RS02770 PF09028 Mac 1 CR541_RS02775 PF01266 FAD dependent oxidoreductase CR541_RS02780 PF07859 alpha/beta hydrolase fold CR541_RS02780 PF13472 GDSL-like Lipase/Acylhydrolase family CR541_RS02785 PF10502 Signal peptidase, peptidase S26 CR541_RS02790 PF01380 SIS domain CR541_RS02795 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS02800 PF00005 ABC transporter CR541_RS02805 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS02815 PF00753 Metallo-beta-lactamase superfamily CR541_RS02820 PF00929 Exonuclease CR541_RS02820 PF13307 Helicase C-terminal domain CR541_RS02825 PF01472 PUA domain CR541_RS02825 PF00696 Amino acid kinase family CR541_RS02830 PF00171 Aldehyde dehydrogenase family CR541_RS02835 PF03807 NADP oxidoreductase coenzyme F420-dependent CR541_RS02835 PF14748 Pyrroline-5-carboxylate reductase dimerisation CR541_RS02845 PF02645 Uncharacterised protein, DegV family COG1307 CR541_RS02850 PF00155 Aminotransferase class I and II CR541_RS02850 PF00392 Bacterial regulatory proteins, gntR family CR541_RS02855 PF03883 Peroxide stress protein YaaA CR541_RS02865 PF02706 Chain length determinant protein CR541_RS02870 PF13614 AAA domain CR541_RS02880 PF02397 Bacterial sugar transferase CR541_RS02905 PF01501 Glycosyl transferase family 8 CR541_RS02905 PF00535 Glycosyl transferase family 2 CR541_RS02910 PF01501 Glycosyl transferase family 8 CR541_RS02910 PF00535 Glycosyl transferase family 2 CR541_RS02930 PF13472 GDSL-like Lipase/Acylhydrolase family CR541_RS02930 PF02348 Cytidylyltransferase CR541_RS02945 PF03102 NeuB family CR541_RS02945 PF08666 SAF domain CR541_RS02950 PF02350 UDP-N-acetylglucosamine 2-epimerase CR541_RS02960 PF02348 Cytidylyltransferase CR541_RS02960 PF13472 GDSL-like Lipase/Acylhydrolase family CR541_RS03000 PF00589 Phage integrase family CR541_RS03000 PF02899 Phage integrase, N-terminal SAM-like domain CR541_RS03005 PF00589 Phage integrase family CR541_RS03005 PF02899 Phage integrase, N-terminal SAM-like domain CR541_RS03030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR541_RS03035 PF01202 Shikimate kinase CR541_RS03040 PF00800 Prephenate dehydratase CR541_RS03045 PF03816 Cell envelope-related transcriptional attenuator domain CR541_RS03050 PF05958 tRNA (Uracil-5-)-methyltransferase CR541_RS03050 PF01938 TRAM domain CR541_RS03060 PF07690 Major Facilitator Superfamily CR541_RS03065 PF12848 ABC transporter CR541_RS03065 PF00005 ABC transporter CR541_RS03080 PF11798 IMS family HHH motif CR541_RS03080 PF11799 impB/mucB/samB family C-terminal domain CR541_RS03080 PF00817 impB/mucB/samB family CR541_RS03105 PF01367 5'-3' exonuclease, C-terminal SAM fold CR541_RS03105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CR541_RS03105 PF00476 DNA polymerase family A CR541_RS03105 PF01612 3'-5' exonuclease CR541_RS03150 PF02773 S-adenosylmethionine synthetase, C-terminal domain CR541_RS03150 PF02772 S-adenosylmethionine synthetase, central domain CR541_RS03150 PF00438 S-adenosylmethionine synthetase, N-terminal domain CR541_RS03165 PF01555 DNA methylase CR541_RS03175 PF00145 C-5 cytosine-specific DNA methylase CR541_RS03220 PF04860 Phage portal protein CR541_RS03225 PF00574 Clp protease CR541_RS03290 PF05105 Bacteriophage holin family CR541_RS03295 PF05257 CHAP domain CR541_RS03295 PF08460 Bacterial SH3 domain CR541_RS03295 PF01520 N-acetylmuramoyl-L-alanine amidase CR541_RS03305 PF00239 Resolvase, N terminal domain CR541_RS03305 PF02796 Helix-turn-helix domain of resolvase CR541_RS03350 PF01636 Phosphotransferase enzyme family CR541_RS03355 PF00583 Acetyltransferase (GNAT) family CR541_RS03360 PF04439 Streptomycin adenylyltransferase CR541_RS03375 PF00398 Ribosomal RNA adenine dimethylase CR541_RS03400 PF00145 C-5 cytosine-specific DNA methylase CR541_RS03490 PF06696 Streptococcal surface antigen repeat CR541_RS03490 PF08363 Glucan-binding protein C CR541_RS03490 PF16364 Cell surface antigen C-terminus CR541_RS03490 PF17998 Cell surface antigen I/II C2 terminal domain CR541_RS03490 PF18652 Adhesin P1 N-terminal domain CR541_RS03515 PF03764 Elongation factor G, domain IV CR541_RS03515 PF00009 Elongation factor Tu GTP binding domain CR541_RS03515 PF14492 Elongation Factor G, domain II CR541_RS03515 PF00679 Elongation factor G C-terminus CR541_RS03520 PF07690 Major Facilitator Superfamily CR541_RS03550 PF01076 Plasmid recombination enzyme CR541_RS03555 PF02195 ParB-like nuclease domain CR541_RS03555 PF17762 HTH domain found in ParB protein CR541_RS03560 PF02229 Transcriptional Coactivator p15 (PC4) CR541_RS03615 PF01381 Helix-turn-helix CR541_RS03620 PF06414 Zeta toxin CR541_RS03645 PF03432 Relaxase/Mobilisation nuclease domain CR541_RS03655 PF00082 Subtilase family CR541_RS03660 PF00072 Response regulator receiver domain CR541_RS03660 PF00486 Transcriptional regulatory protein, C terminal CR541_RS03665 PF00512 His Kinase A (phospho-acceptor) domain CR541_RS03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS03670 PF00005 ABC transporter CR541_RS03685 PF02052 Gallidermin CR541_RS03690 PF04738 Lantibiotic dehydratase, N terminus CR541_RS03690 PF14028 Lantibiotic biosynthesis dehydratase C-term CR541_RS03695 PF00005 ABC transporter CR541_RS03700 PF05147 Lanthionine synthetase C-like protein CR541_RS03705 PF18218 Lantibiotic immunity protein Spa1 C-terminal domain CR541_RS03725 PF03275 UDP-galactopyranose mutase CR541_RS03730 PF02525 Flavodoxin-like fold CR541_RS03750 PF00155 Aminotransferase class I and II CR541_RS03755 PF01336 OB-fold nucleic acid binding domain CR541_RS03755 PF00152 tRNA synthetases class II (D, K and N) CR541_RS03760 PF01336 OB-fold nucleic acid binding domain CR541_RS03760 PF00152 tRNA synthetases class II (D, K and N) CR541_RS03780 PF01554 MatE CR541_RS03785 PF01042 Endoribonuclease L-PSP CR541_RS03790 PF03668 P-loop ATPase protein family CR541_RS03795 PF01933 Uncharacterised protein family UPF0052 CR541_RS03800 PF02650 WhiA C-terminal HTH domain CR541_RS03800 PF14527 WhiA LAGLIDADG-like domain CR541_RS03800 PF10298 WhiA N-terminal LAGLIDADG-like domain CR541_RS03815 PF13673 Acetyltransferase (GNAT) domain CR541_RS03820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR541_RS03820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR541_RS03825 PF00696 Amino acid kinase family CR541_RS03830 PF03606 C4-dicarboxylate anaerobic carrier CR541_RS03835 PF01546 Peptidase family M20/M25/M40 CR541_RS03840 PF07501 G5 domain CR541_RS03840 PF00728 Glycosyl hydrolase family 20, catalytic domain CR541_RS03840 PF00746 LPXTG cell wall anchor motif CR541_RS03840 PF04650 YSIRK type signal peptide CR541_RS03845 PF02863 Arginine repressor, C-terminal domain CR541_RS03845 PF01316 Arginine repressor, DNA binding domain CR541_RS03850 PF02547 Queuosine biosynthesis protein CR541_RS03855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CR541_RS03880 PF13193 AMP-binding enzyme C-terminal domain CR541_RS03880 PF00501 AMP-binding enzyme CR541_RS03885 PF03062 MBOAT, membrane-bound O-acyltransferase family CR541_RS03890 PF00550 Phosphopantetheine attachment site CR541_RS03895 PF04914 DltD protein CR541_RS03905 PF13409 Glutathione S-transferase, N-terminal domain CR541_RS03910 PF01479 S4 domain CR541_RS03910 PF00849 RNA pseudouridylate synthase CR541_RS03915 PF00255 Glutathione peroxidase CR541_RS03920 PF01032 FecCD transport family CR541_RS03925 PF01032 FecCD transport family CR541_RS03930 PF01497 Periplasmic binding protein CR541_RS03935 PF00005 ABC transporter CR541_RS03940 PF02875 Mur ligase family, glutamate ligase domain CR541_RS03940 PF08245 Mur ligase middle domain CR541_RS03945 PF01553 Acyltransferase CR541_RS03950 PF10531 SLBB domain CR541_RS03955 PF00753 Metallo-beta-lactamase superfamily CR541_RS03955 PF03772 Competence protein CR541_RS03955 PF13567 Domain of unknown function (DUF4131) CR541_RS03960 PF00571 CBS domain CR541_RS03975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR541_RS03975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR541_RS03980 PF02223 Thymidylate kinase CR541_RS03985 PF09115 DNA polymerase III, delta subunit, C terminal CR541_RS03990 PF06156 Initiation control protein YabA CR541_RS03995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CR541_RS04000 PF00266 Aminotransferase class-V CR541_RS04010 PF01842 ACT domain CR541_RS04010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CR541_RS04010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CR541_RS04015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CR541_RS04015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CR541_RS04020 PF03960 ArsC family CR541_RS04030 PF03372 Endonuclease/Exonuclease/phosphatase family CR541_RS04040 PF13520 Amino acid permease CR541_RS04085 PF18273 Type III R-M EcoP15I C-terminal domain CR541_RS04085 PF01555 DNA methylase CR541_RS04090 PF01555 DNA methylase CR541_RS04090 PF18273 Type III R-M EcoP15I C-terminal domain CR541_RS04095 PF08774 VRR-NUC domain CR541_RS04095 PF04851 Type III restriction enzyme, res subunit CR541_RS04110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR541_RS04110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR541_RS04110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR541_RS04110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR541_RS04115 PF12822 ECF transporter, substrate-specific component CR541_RS04120 PF02441 Flavoprotein CR541_RS04125 PF04127 DNA / pantothenate metabolism flavoprotein CR541_RS04125 PF02441 Flavoprotein CR541_RS04130 PF01268 Formate--tetrahydrofolate ligase CR541_RS04140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS04145 PF18766 SWI2/SNF2 ATPase CR541_RS04145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CR541_RS04145 PF11867 Domain of unknown function (DUF3387) CR541_RS04155 PF01420 Type I restriction modification DNA specificity domain CR541_RS04190 PF04055 Radical SAM superfamily CR541_RS04195 PF00455 DeoR C terminal sensor domain CR541_RS04195 PF08220 DeoR-like helix-turn-helix domain CR541_RS04200 PF04198 Putative sugar-binding domain CR541_RS04200 PF13936 Helix-turn-helix domain CR541_RS04205 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR541_RS04210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS04215 PF02378 Phosphotransferase system, EIIC CR541_RS04220 PF02901 Pyruvate formate lyase-like CR541_RS04220 PF01228 Glycine radical CR541_RS04225 PF00923 Transaldolase/Fructose-6-phosphate aldolase CR541_RS04235 PF00465 Iron-containing alcohol dehydrogenase CR541_RS04240 PF02774 Semialdehyde dehydrogenase, dimerisation domain CR541_RS04240 PF01118 Semialdehyde dehydrogenase, NAD binding domain CR541_RS04245 PF00701 Dihydrodipicolinate synthetase family CR541_RS04250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS04250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS04260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CR541_RS04260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CR541_RS04265 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CR541_RS04265 PF01266 FAD dependent oxidoreductase CR541_RS04270 PF00230 Major intrinsic protein CR541_RS04275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CR541_RS04285 PF08439 Oligopeptidase F CR541_RS04285 PF01432 Peptidase family M3 CR541_RS04295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS04300 PF13361 UvrD-like helicase C-terminal domain CR541_RS04300 PF00580 UvrD/REP helicase N-terminal domain CR541_RS04310 PF08543 Phosphomethylpyrimidine kinase CR541_RS04315 PF02110 Hydroxyethylthiazole kinase family CR541_RS04320 PF02581 Thiamine monophosphate synthase CR541_RS04330 PF01048 Phosphorylase superfamily CR541_RS04340 PF02361 Cobalt transport protein CR541_RS04345 PF00005 ABC transporter CR541_RS04350 PF00005 ABC transporter CR541_RS04355 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS04385 PF00005 ABC transporter CR541_RS04390 PF08459 UvrC Helix-hairpin-helix N-terminal CR541_RS04390 PF02151 UvrB/uvrC motif CR541_RS04390 PF01541 GIY-YIG catalytic domain CR541_RS04400 PF09269 Domain of unknown function (DUF1967) CR541_RS04400 PF01018 GTP1/OBG CR541_RS04400 PF01926 50S ribosome-binding GTPase CR541_RS04415 PF12705 PD-(D/E)XK nuclease superfamily CR541_RS04420 PF00580 UvrD/REP helicase N-terminal domain CR541_RS04420 PF13361 UvrD-like helicase C-terminal domain CR541_RS04420 PF12705 PD-(D/E)XK nuclease superfamily CR541_RS04425 PF02660 Glycerol-3-phosphate acyltransferase CR541_RS04430 PF01751 Toprim domain CR541_RS04430 PF00986 DNA gyrase B subunit, carboxyl terminus CR541_RS04430 PF00204 DNA gyrase B CR541_RS04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS04455 PF00521 DNA gyrase/topoisomerase IV, subunit A CR541_RS04455 PF03989 DNA gyrase C-terminal domain, beta-propeller CR541_RS04465 PF01063 Amino-transferase class IV CR541_RS04485 PF00575 S1 RNA binding domain CR541_RS04510 PF00266 Aminotransferase class-V CR541_RS04515 PF02926 THUMP domain CR541_RS04515 PF02568 Thiamine biosynthesis protein (ThiI) CR541_RS04520 PF05525 Branched-chain amino acid transport protein CR541_RS04525 PF00829 Ribosomal prokaryotic L21 protein CR541_RS04530 PF01016 Ribosomal L27 protein CR541_RS04550 PF01479 S4 domain CR541_RS04550 PF00849 RNA pseudouridylate synthase CR541_RS04565 PF00156 Phosphoribosyl transferase domain CR541_RS04570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR541_RS04570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR541_RS04575 PF00117 Glutamine amidotransferase class-I CR541_RS04575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CR541_RS04580 PF02142 MGS-like domain CR541_RS04580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CR541_RS04580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR541_RS04585 PF04445 Putative SAM-dependent methyltransferase CR541_RS04590 PF01470 Pyroglutamyl peptidase CR541_RS04600 PF00886 Ribosomal protein S16 CR541_RS04610 PF00005 ABC transporter CR541_RS04610 PF00664 ABC transporter transmembrane region CR541_RS04615 PF00005 ABC transporter CR541_RS04615 PF00664 ABC transporter transmembrane region CR541_RS04620 PF01522 Polysaccharide deacetylase CR541_RS04625 PF00742 Homoserine dehydrogenase CR541_RS04625 PF03447 Homoserine dehydrogenase, NAD binding domain CR541_RS04630 PF00288 GHMP kinases N terminal domain CR541_RS04630 PF08544 GHMP kinases C terminal CR541_RS04635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CR541_RS04635 PF01565 FAD binding domain CR541_RS04640 PF00005 ABC transporter CR541_RS04640 PF08402 TOBE domain CR541_RS04645 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS04655 PF13416 Bacterial extracellular solute-binding protein CR541_RS04660 PF00654 Voltage gated chloride channel CR541_RS04670 PF06280 Fn3-like domain CR541_RS04670 PF02225 PA domain CR541_RS04670 PF00082 Subtilase family CR541_RS04675 PF01256 Carbohydrate kinase CR541_RS04680 PF00633 Helix-hairpin-helix motif CR541_RS04680 PF10576 Iron-sulfur binding domain of endonuclease III CR541_RS04680 PF00730 HhH-GPD superfamily base excision DNA repair protein CR541_RS04685 PF00478 IMP dehydrogenase / GMP reductase domain CR541_RS04695 PF01782 RimM N-terminal domain CR541_RS04695 PF05239 PRC-barrel domain CR541_RS04700 PF01746 tRNA (Guanine-1)-methyltransferase CR541_RS04705 PF00155 Aminotransferase class I and II CR541_RS04710 PF00455 DeoR C terminal sensor domain CR541_RS04710 PF08220 DeoR-like helix-turn-helix domain CR541_RS04715 PF00294 pfkB family carbohydrate kinase CR541_RS04720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS04720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR541_RS04730 PF02645 Uncharacterised protein, DegV family COG1307 CR541_RS04735 PF01113 Dihydrodipicolinate reductase, N-terminus CR541_RS04735 PF05173 Dihydrodipicolinate reductase, C-terminus CR541_RS04740 PF01743 Poly A polymerase head domain CR541_RS04740 PF12627 Probable RNA and SrmB- binding site of polymerase A CR541_RS04740 PF13735 tRNA nucleotidyltransferase domain 2 putative CR541_RS04745 PF12848 ABC transporter CR541_RS04745 PF16326 ABC transporter C-terminal domain CR541_RS04745 PF00005 ABC transporter CR541_RS04755 PF00480 ROK family CR541_RS04770 PF00303 Thymidylate synthase CR541_RS04775 PF00186 Dihydrofolate reductase CR541_RS04785 PF10431 C-terminal, D2-small domain, of ClpB protein CR541_RS04785 PF06689 ClpX C4-type zinc finger CR541_RS04785 PF07724 AAA domain (Cdc48 subfamily) CR541_RS04790 PF01926 50S ribosome-binding GTPase CR541_RS04795 PF00334 Nucleoside diphosphate kinase CR541_RS04805 PF00679 Elongation factor G C-terminus CR541_RS04805 PF06421 GTP-binding protein LepA C-terminus CR541_RS04805 PF03144 Elongation factor Tu domain 2 CR541_RS04805 PF00009 Elongation factor Tu GTP binding domain CR541_RS04805 PF14492 Elongation Factor G, domain II CR541_RS04810 PF01361 Tautomerase enzyme CR541_RS04825 PF00265 Thymidine kinase CR541_RS04830 PF00472 RF-1 domain CR541_RS04830 PF03462 PCRF domain CR541_RS04835 PF05175 Methyltransferase small domain CR541_RS04840 PF03481 Putative GTP-binding controlling metal-binding CR541_RS04840 PF01300 Telomere recombination CR541_RS04850 PF00464 Serine hydroxymethyltransferase CR541_RS04865 PF00106 short chain dehydrogenase CR541_RS04890 PF07728 AAA domain (dynein-related subfamily) CR541_RS04890 PF12102 Domain of unknown function (DUF3578) CR541_RS04895 PF10117 McrBC 5-methylcytosine restriction system component CR541_RS04900 PF00958 GMP synthase C terminal domain CR541_RS04900 PF02540 NAD synthase CR541_RS04900 PF00117 Glutamine amidotransferase class-I CR541_RS04905 PF07702 UTRA domain CR541_RS04905 PF00392 Bacterial regulatory proteins, gntR family CR541_RS04910 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CR541_RS04915 PF02881 SRP54-type protein, helical bundle domain CR541_RS04915 PF02978 Signal peptide binding domain CR541_RS04915 PF00448 SRP54-type protein, GTPase domain CR541_RS04950 PF13495 Phage integrase, N-terminal SAM-like domain CR541_RS04950 PF00589 Phage integrase family CR541_RS04955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR541_RS04955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR541_RS04955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR541_RS04955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR541_RS04960 PF00512 His Kinase A (phospho-acceptor) domain CR541_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS04965 PF00072 Response regulator receiver domain CR541_RS04965 PF00486 Transcriptional regulatory protein, C terminal CR541_RS04985 PF00005 ABC transporter CR541_RS05000 PF00005 ABC transporter CR541_RS05025 PF00756 Putative esterase CR541_RS05025 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CR541_RS05035 PF06445 GyrI-like small molecule binding domain CR541_RS05035 PF12833 Helix-turn-helix domain CR541_RS05040 PF01134 Glucose inhibited division protein A CR541_RS05045 PF13344 Haloacid dehalogenase-like hydrolase CR541_RS05050 PF16320 Ribosomal protein L7/L12 dimerisation domain CR541_RS05050 PF00542 Ribosomal protein L7/L12 C-terminal domain CR541_RS05055 PF00466 Ribosomal protein L10 CR541_RS05060 PF01751 Toprim domain CR541_RS05060 PF01396 Topoisomerase DNA binding C4 zinc finger CR541_RS05060 PF01131 DNA topoisomerase CR541_RS05065 PF02481 DNA recombination-mediator protein A CR541_RS05065 PF18255 DNA processing protein A sterile alpha motif domain CR541_RS05070 PF12464 Maltose acetyltransferase CR541_RS05070 PF14602 Hexapeptide repeat of succinyl-transferase CR541_RS05075 PF02583 Metal-sensitive transcriptional repressor CR541_RS05080 PF00581 Rhodanese-like domain CR541_RS05085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS05085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS05095 PF03006 Haemolysin-III related CR541_RS05105 PF01351 Ribonuclease HII CR541_RS05110 PF01926 50S ribosome-binding GTPase CR541_RS05120 PF02545 Maf-like protein CR541_RS05125 PF00149 Calcineurin-like phosphoesterase CR541_RS05125 PF02872 5'-nucleotidase, C-terminal domain CR541_RS05130 PF01979 Amidohydrolase family CR541_RS05135 PF03167 Uracil DNA glycosylase superfamily CR541_RS05140 PF00535 Glycosyl transferase family 2 CR541_RS05145 PF00156 Phosphoribosyl transferase domain CR541_RS05150 PF00719 Inorganic pyrophosphatase CR541_RS05155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CR541_RS05160 PF01180 Dihydroorotate dehydrogenase CR541_RS05165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CR541_RS05170 PF03466 LysR substrate binding domain CR541_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CR541_RS05175 PF00483 Nucleotidyl transferase CR541_RS05180 PF00483 Nucleotidyl transferase CR541_RS05180 PF00132 Bacterial transferase hexapeptide (six repeats) CR541_RS05185 PF00534 Glycosyl transferases group 1 CR541_RS05185 PF08323 Starch synthase catalytic domain CR541_RS05190 PF00128 Alpha amylase, catalytic domain CR541_RS05190 PF02806 Alpha amylase, C-terminal all-beta domain CR541_RS05190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR541_RS05195 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS05200 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS05205 PF00293 NUDIX domain CR541_RS05230 PF00271 Helicase conserved C-terminal domain CR541_RS05230 PF04851 Type III restriction enzyme, res subunit CR541_RS05230 PF02151 UvrB/uvrC motif CR541_RS05230 PF12344 Ultra-violet resistance protein B CR541_RS05230 PF17757 UvrB interaction domain CR541_RS05235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS05240 PF00005 ABC transporter CR541_RS05250 PF12848 ABC transporter CR541_RS05250 PF16326 ABC transporter C-terminal domain CR541_RS05250 PF00005 ABC transporter CR541_RS05255 PF01053 Cys/Met metabolism PLP-dependent enzyme CR541_RS05270 PF01263 Aldose 1-epimerase CR541_RS05275 PF00232 Glycosyl hydrolase family 1 CR541_RS05280 PF02378 Phosphotransferase system, EIIC CR541_RS05280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS05285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR541_RS05290 PF03123 CAT RNA binding domain CR541_RS05290 PF00874 PRD domain CR541_RS05295 PF01791 DeoC/LacD family aldolase CR541_RS05305 PF02502 Ribose/Galactose Isomerase CR541_RS05310 PF02502 Ribose/Galactose Isomerase CR541_RS05320 PF08220 DeoR-like helix-turn-helix domain CR541_RS05320 PF00455 DeoR C terminal sensor domain CR541_RS05350 PF08671 Anti-repressor SinI CR541_RS05350 PF01381 Helix-turn-helix CR541_RS05355 PF00730 HhH-GPD superfamily base excision DNA repair protein CR541_RS05355 PF14815 NUDIX domain CR541_RS05365 PF00664 ABC transporter transmembrane region CR541_RS05365 PF00005 ABC transporter CR541_RS05370 PF00664 ABC transporter transmembrane region CR541_RS05370 PF00005 ABC transporter CR541_RS05375 PF01515 Phosphate acetyl/butaryl transferase CR541_RS05380 PF00849 RNA pseudouridylate synthase CR541_RS05385 PF01513 ATP-NAD kinase CR541_RS05390 PF04607 Region found in RelA / SpoT proteins CR541_RS05395 PF01928 CYTH domain CR541_RS05400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CR541_RS05400 PF14572 Phosphoribosyl synthetase-associated domain CR541_RS05405 PF00266 Aminotransferase class-V CR541_RS05420 PF02629 CoA binding domain CR541_RS05420 PF06971 Putative DNA-binding protein N-terminus CR541_RS05425 PF07722 Peptidase C26 CR541_RS05430 PF04002 RadC-like JAB domain CR541_RS05435 PF04203 Sortase domain CR541_RS05440 PF00521 DNA gyrase/topoisomerase IV, subunit A CR541_RS05440 PF03989 DNA gyrase C-terminal domain, beta-propeller CR541_RS05445 PF00056 lactate/malate dehydrogenase, NAD binding domain CR541_RS05445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CR541_RS05455 PF02653 Branched-chain amino acid transport system / permease component CR541_RS05460 PF02653 Branched-chain amino acid transport system / permease component CR541_RS05465 PF00005 ABC transporter CR541_RS05470 PF02608 ABC transporter substrate-binding protein PnrA-like CR541_RS05475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CR541_RS05480 PF01791 DeoC/LacD family aldolase CR541_RS05485 PF00591 Glycosyl transferase family, a/b domain CR541_RS05485 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CR541_RS05485 PF02885 Glycosyl transferase family, helical bundle domain CR541_RS05490 PF05175 Methyltransferase small domain CR541_RS05495 PF00485 Phosphoribulokinase / Uridine kinase family CR541_RS05500 PF01649 Ribosomal protein S20 CR541_RS05510 PF01797 Transposase IS200 like CR541_RS05525 PF00512 His Kinase A (phospho-acceptor) domain CR541_RS05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS05530 PF00486 Transcriptional regulatory protein, C terminal CR541_RS05530 PF00072 Response regulator receiver domain CR541_RS05545 PF01895 PhoU domain CR541_RS05550 PF00005 ABC transporter CR541_RS05555 PF00005 ABC transporter CR541_RS05560 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS05570 PF12849 PBP superfamily domain CR541_RS05575 PF01189 16S rRNA methyltransferase RsmB/F CR541_RS05575 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CR541_RS05575 PF17126 RsmF rRNA methyltransferase first C-terminal domain CR541_RS05580 PF00459 Inositol monophosphatase family CR541_RS05585 PF05256 Uncharacterised protein family (UPF0223) CR541_RS05590 PF03960 ArsC family CR541_RS05595 PF07885 Ion channel CR541_RS05600 PF06574 FAD synthetase CR541_RS05600 PF01687 Riboflavin kinase CR541_RS05605 PF16198 tRNA pseudouridylate synthase B C-terminal domain CR541_RS05605 PF01509 TruB family pseudouridylate synthase (N terminal domain) CR541_RS05670 PF07687 Peptidase dimerisation domain CR541_RS05670 PF01546 Peptidase family M20/M25/M40 CR541_RS05705 PF06993 Protein of unknown function (DUF1304) CR541_RS05710 PF01047 MarR family CR541_RS05725 PF01545 Cation efflux family CR541_RS05725 PF16916 Dimerisation domain of Zinc Transporter CR541_RS05735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CR541_RS05740 PF02152 Dihydroneopterin aldolase CR541_RS05745 PF00809 Pterin binding enzyme CR541_RS05750 PF01227 GTP cyclohydrolase I CR541_RS05755 PF00293 NUDIX domain CR541_RS05780 PF01588 Putative tRNA binding domain CR541_RS05780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CR541_RS05780 PF03147 Ferredoxin-fold anticodon binding domain CR541_RS05780 PF03483 B3/4 domain CR541_RS05780 PF03484 tRNA synthetase B5 domain CR541_RS05785 PF13673 Acetyltransferase (GNAT) domain CR541_RS05790 PF01409 tRNA synthetases class II core domain (F) CR541_RS05790 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CR541_RS05795 PF00933 Glycosyl hydrolase family 3 N terminal domain CR541_RS05800 PF00933 Glycosyl hydrolase family 3 N terminal domain CR541_RS05810 PF00106 short chain dehydrogenase CR541_RS05815 PF03786 D-mannonate dehydratase (UxuA) CR541_RS05820 PF02614 Glucuronate isomerase CR541_RS05825 PF01081 KDPG and KHG aldolase CR541_RS05830 PF00392 Bacterial regulatory proteins, gntR family CR541_RS05830 PF07729 FCD domain CR541_RS05835 PF02837 Glycosyl hydrolases family 2, sugar binding domain CR541_RS05835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CR541_RS05835 PF00703 Glycosyl hydrolases family 2 CR541_RS05840 PF00294 pfkB family carbohydrate kinase CR541_RS05850 PF01223 DNA/RNA non-specific endonuclease CR541_RS05855 PF11772 DNA-directed RNA polymerase subunit beta CR541_RS05860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR541_RS05870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CR541_RS05870 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CR541_RS05875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR541_RS05875 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR541_RS05880 PF00231 ATP synthase CR541_RS05885 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR541_RS05885 PF00306 ATP synthase alpha/beta chain, C terminal domain CR541_RS05885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR541_RS05890 PF00213 ATP synthase delta (OSCP) subunit CR541_RS05895 PF00430 ATP synthase B/B' CF(0) CR541_RS05900 PF00119 ATP synthase A chain CR541_RS05905 PF00137 ATP synthase subunit C CR541_RS05910 PF00781 Diacylglycerol kinase catalytic domain CR541_RS05915 PF00533 BRCA1 C Terminus (BRCT) domain CR541_RS05915 PF01653 NAD-dependent DNA ligase adenylation domain CR541_RS05915 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CR541_RS05915 PF12826 Helix-hairpin-helix motif CR541_RS05915 PF03120 NAD-dependent DNA ligase OB-fold domain CR541_RS05920 PF03773 Predicted permease CR541_RS05925 PF09323 Domain of unknown function (DUF1980) CR541_RS05930 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CR541_RS05930 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CR541_RS05945 PF00448 SRP54-type protein, GTPase domain CR541_RS05945 PF02881 SRP54-type protein, helical bundle domain CR541_RS05960 PF06470 SMC proteins Flexible Hinge Domain CR541_RS05960 PF02463 RecF/RecN/SMC N terminal domain CR541_RS05965 PF00035 Double-stranded RNA binding motif CR541_RS05965 PF14622 Ribonuclease-III-like CR541_RS05985 PF13936 Helix-turn-helix domain CR541_RS05985 PF00665 Integrase core domain CR541_RS05990 PF08903 Domain of unknown function (DUF1846) CR541_RS05995 PF00391 PEP-utilising enzyme, mobile domain CR541_RS05995 PF05524 PEP-utilising enzyme, N-terminal CR541_RS05995 PF02896 PEP-utilising enzyme, TIM barrel domain CR541_RS06000 PF00381 PTS HPr component phosphorylation site CR541_RS06005 PF00180 Isocitrate/isopropylmalate dehydrogenase CR541_RS06010 PF00285 Citrate synthase, C-terminal domain CR541_RS06015 PF00330 Aconitase family (aconitate hydratase) CR541_RS06015 PF00694 Aconitase C-terminal domain CR541_RS06020 PF00462 Glutaredoxin CR541_RS06025 PF02867 Ribonucleotide reductase, barrel domain CR541_RS06025 PF08343 Ribonucleotide reductase N-terminal CR541_RS06025 PF00317 Ribonucleotide reductase, all-alpha domain CR541_RS06035 PF00268 Ribonucleotide reductase, small chain CR541_RS06040 PF00356 Bacterial regulatory proteins, lacI family CR541_RS06055 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CR541_RS06055 PF02278 Polysaccharide lyase family 8, super-sandwich domain CR541_RS06055 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CR541_RS06060 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CR541_RS06060 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CR541_RS06060 PF02278 Polysaccharide lyase family 8, super-sandwich domain CR541_RS06065 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CR541_RS06065 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CR541_RS06065 PF02278 Polysaccharide lyase family 8, super-sandwich domain CR541_RS06075 PF03613 PTS system mannose/fructose/sorbose family IID component CR541_RS06085 PF03830 PTS system sorbose subfamily IIB component CR541_RS06090 PF07470 Glycosyl Hydrolase Family 88 CR541_RS06155 PF01381 Helix-turn-helix CR541_RS06180 PF02272 DHHA1 domain CR541_RS06180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR541_RS06180 PF01411 tRNA synthetases class II (A) CR541_RS06190 PF13145 PPIC-type PPIASE domain CR541_RS06195 PF01596 O-methyltransferase CR541_RS06210 PF01432 Peptidase family M3 CR541_RS06210 PF08439 Oligopeptidase F CR541_RS06220 PF01588 Putative tRNA binding domain CR541_RS06220 PF09334 tRNA synthetases class I (M) CR541_RS06235 PF00793 DAHP synthetase I family CR541_RS06240 PF00793 DAHP synthetase I family CR541_RS06245 PF08501 Shikimate dehydrogenase substrate binding domain CR541_RS06245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CR541_RS06250 PF01761 3-dehydroquinate synthase CR541_RS06260 PF00005 ABC transporter CR541_RS06265 PF02653 Branched-chain amino acid transport system / permease component CR541_RS06285 PF01791 DeoC/LacD family aldolase CR541_RS06290 PF01979 Amidohydrolase family CR541_RS06295 PF06133 Control of competence regulator ComK, YlbF/YmcA CR541_RS06300 PF02153 Prephenate dehydrogenase CR541_RS06305 PF01264 Chorismate synthase CR541_RS06310 PF01487 Type I 3-dehydroquinase CR541_RS06315 PF17785 PUA-like domain CR541_RS06315 PF10672 S-adenosylmethionine-dependent methyltransferase CR541_RS06320 PF00884 Sulfatase CR541_RS06330 PF00453 Ribosomal protein L20 CR541_RS06335 PF01632 Ribosomal protein L35 CR541_RS06340 PF00707 Translation initiation factor IF-3, C-terminal domain CR541_RS06340 PF05198 Translation initiation factor IF-3, N-terminal domain CR541_RS06345 PF02224 Cytidylate kinase CR541_RS06375 PF00535 Glycosyl transferase family 2 CR541_RS06380 PF13439 Glycosyltransferase Family 4 CR541_RS06380 PF00534 Glycosyl transferases group 1 CR541_RS06390 PF00535 Glycosyl transferase family 2 CR541_RS06390 PF01501 Glycosyl transferase family 8 CR541_RS06395 PF01501 Glycosyl transferase family 8 CR541_RS06415 PF14524 Wzt C-terminal domain CR541_RS06415 PF00005 ABC transporter CR541_RS06425 PF00535 Glycosyl transferase family 2 CR541_RS06445 PF05036 Sporulation related domain CR541_RS06445 PF01520 N-acetylmuramoyl-L-alanine amidase CR541_RS06455 PF04321 RmlD substrate binding domain CR541_RS06460 PF16363 GDP-mannose 4,6 dehydratase CR541_RS06470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CR541_RS06475 PF00483 Nucleotidyl transferase CR541_RS06480 PF02535 ZIP Zinc transporter CR541_RS06485 PF01784 NIF3 (NGG1p interacting factor 3) CR541_RS06490 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CR541_RS06500 PF04204 Homoserine O-succinyltransferase CR541_RS06505 PF00156 Phosphoribosyl transferase domain CR541_RS06525 PF17768 RecJ OB domain CR541_RS06525 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CR541_RS06525 PF02272 DHHA1 domain CR541_RS06525 PF01368 DHH family CR541_RS06530 PF13091 PLD-like domain CR541_RS06540 PF00106 short chain dehydrogenase CR541_RS06545 PF00753 Metallo-beta-lactamase superfamily CR541_RS06545 PF12706 Beta-lactamase superfamily domain CR541_RS06555 PF16360 GTP-binding GTPase Middle Region CR541_RS06555 PF01926 50S ribosome-binding GTPase CR541_RS06555 PF13167 GTP-binding GTPase N-terminal CR541_RS06570 PF07690 Major Facilitator Superfamily CR541_RS06575 PF01717 Cobalamin-independent synthase, Catalytic domain CR541_RS06580 PF02562 PhoH-like protein CR541_RS06585 PF06855 YozE SAM-like fold CR541_RS06595 PF08546 Ketopantoate reductase PanE/ApbA C terminal CR541_RS06595 PF02558 Ketopantoate reductase PanE/ApbA CR541_RS06600 PF17783 CvfB-like winged helix domain CR541_RS06600 PF13509 S1 domain CR541_RS06605 PF01765 Ribosome recycling factor CR541_RS06610 PF00696 Amino acid kinase family CR541_RS06615 PF01943 Polysaccharide biosynthesis protein CR541_RS06615 PF14667 Polysaccharide biosynthesis C-terminal domain CR541_RS06620 PF02798 Glutathione S-transferase, N-terminal domain CR541_RS06630 PF00687 Ribosomal protein L1p/L10e family CR541_RS06635 PF03946 Ribosomal protein L11, N-terminal domain CR541_RS06635 PF00298 Ribosomal protein L11, RNA binding domain CR541_RS06645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CR541_RS06650 PF17854 FtsK alpha domain CR541_RS06650 PF09397 Ftsk gamma domain CR541_RS06650 PF01580 FtsK/SpoIIIE family CR541_RS06655 PF08244 Glycosyl hydrolases family 32 C terminal CR541_RS06655 PF00251 Glycosyl hydrolases family 32 N-terminal domain CR541_RS06665 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS06675 PF00356 Bacterial regulatory proteins, lacI family CR541_RS06695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR541_RS06700 PF01610 Transposase CR541_RS06700 PF13683 Integrase core domain CR541_RS06705 PF16658 Class II release factor RF3, C-terminal domain CR541_RS06705 PF03144 Elongation factor Tu domain 2 CR541_RS06705 PF00009 Elongation factor Tu GTP binding domain CR541_RS06720 PF08245 Mur ligase middle domain CR541_RS06720 PF01225 Mur ligase family, catalytic domain CR541_RS06720 PF02875 Mur ligase family, glutamate ligase domain CR541_RS06730 PF01820 D-ala D-ala ligase N-terminus CR541_RS06730 PF07478 D-ala D-ala ligase C-terminus CR541_RS06735 PF02132 RecR protein CR541_RS06735 PF13662 Toprim domain CR541_RS06740 PF00905 Penicillin binding protein transpeptidase domain CR541_RS06740 PF03717 Penicillin-binding Protein dimerisation domain CR541_RS06745 PF00005 ABC transporter CR541_RS06750 PF00005 ABC transporter CR541_RS06750 PF12848 ABC transporter CR541_RS06760 PF00753 Metallo-beta-lactamase superfamily CR541_RS06765 PF00672 HAMP domain CR541_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS06765 PF00512 His Kinase A (phospho-acceptor) domain CR541_RS06765 PF13426 PAS domain CR541_RS06770 PF00072 Response regulator receiver domain CR541_RS06770 PF00486 Transcriptional regulatory protein, C terminal CR541_RS06775 PF00005 ABC transporter CR541_RS06780 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS06785 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS06790 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS06795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR541_RS06795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR541_RS06795 PF03129 Anticodon binding domain CR541_RS06795 PF02824 TGS domain CR541_RS06810 PF00534 Glycosyl transferases group 1 CR541_RS06810 PF13439 Glycosyltransferase Family 4 CR541_RS06815 PF13439 Glycosyltransferase Family 4 CR541_RS06815 PF00534 Glycosyl transferases group 1 CR541_RS06820 PF12892 Spy0128-like isopeptide containing domain CR541_RS06830 PF00356 Bacterial regulatory proteins, lacI family CR541_RS06835 PF00557 Metallopeptidase family M24 CR541_RS06835 PF01321 Creatinase/Prolidase N-terminal domain CR541_RS06845 PF03613 PTS system mannose/fructose/sorbose family IID component CR541_RS06850 PF03609 PTS system sorbose-specific iic component CR541_RS06855 PF03830 PTS system sorbose subfamily IIB component CR541_RS06860 PF01055 Glycosyl hydrolases family 31 CR541_RS06865 PF01055 Glycosyl hydrolases family 31 CR541_RS06870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CR541_RS06870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CR541_RS06880 PF00480 ROK family CR541_RS06900 PF01702 Queuine tRNA-ribosyltransferase CR541_RS06915 PF13380 CoA binding domain CR541_RS06925 PF00476 DNA polymerase family A CR541_RS06925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CR541_RS06925 PF01367 5'-3' exonuclease, C-terminal SAM fold CR541_RS06940 PF00005 ABC transporter CR541_RS06955 PF00403 Heavy-metal-associated domain CR541_RS06960 PF03577 Peptidase family C69 CR541_RS06970 PF08240 Alcohol dehydrogenase GroES-like domain CR541_RS06970 PF00107 Zinc-binding dehydrogenase CR541_RS06975 PF01668 SmpB protein CR541_RS06980 PF00575 S1 RNA binding domain CR541_RS06980 PF08206 Ribonuclease B OB domain CR541_RS06980 PF00773 RNB domain CR541_RS06980 PF17876 Cold shock domain CR541_RS06985 PF00152 tRNA synthetases class II (D, K and N) CR541_RS06985 PF01336 OB-fold nucleic acid binding domain CR541_RS06995 PF00471 Ribosomal protein L33 CR541_RS07000 PF07690 Major Facilitator Superfamily CR541_RS07000 PF00083 Sugar (and other) transporter CR541_RS07005 PF01121 Dephospho-CoA kinase CR541_RS07010 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CR541_RS07010 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CR541_RS07010 PF06827 Zinc finger found in FPG and IleRS CR541_RS07015 PF01926 50S ribosome-binding GTPase CR541_RS07015 PF07650 KH domain CR541_RS07020 PF01219 Prokaryotic diacylglycerol kinase CR541_RS07025 PF02130 Uncharacterized protein family UPF0054 CR541_RS07030 PF01380 SIS domain CR541_RS07030 PF01418 Helix-turn-helix domain, rpiR family CR541_RS07035 PF02378 Phosphotransferase system, EIIC CR541_RS07035 PF00367 phosphotransferase system, EIIB CR541_RS07035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR541_RS07040 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CR541_RS07045 PF17440 Thiol-activated cytolysin beta sandwich domain CR541_RS07045 PF01289 Thiol-activated cytolysin CR541_RS07050 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS07055 PF00664 ABC transporter transmembrane region CR541_RS07055 PF00005 ABC transporter CR541_RS07060 PF00005 ABC transporter CR541_RS07060 PF00664 ABC transporter transmembrane region CR541_RS07080 PF07670 Nucleoside recognition CR541_RS07080 PF02421 Ferrous iron transport protein B CR541_RS07080 PF07664 Ferrous iron transport protein B C terminus CR541_RS07080 PF17910 FeoB cytosolic helical domain CR541_RS07090 PF02687 FtsX-like permease family CR541_RS07090 PF18075 FtsX extracellular domain CR541_RS07095 PF00005 ABC transporter CR541_RS07105 PF08331 Domain of unknown function (DUF1730) CR541_RS07110 PF04892 VanZ like family CR541_RS07130 PF00690 Cation transporter/ATPase, N-terminus CR541_RS07130 PF00689 Cation transporting ATPase, C-terminus CR541_RS07135 PF13936 Helix-turn-helix domain CR541_RS07135 PF00665 Integrase core domain CR541_RS07170 PF01883 Iron-sulfur cluster assembly protein CR541_RS07175 PF00140 Sigma-70 factor, region 1.2 CR541_RS07175 PF04539 Sigma-70 region 3 CR541_RS07175 PF04542 Sigma-70 region 2 CR541_RS07175 PF04545 Sigma-70, region 4 CR541_RS07175 PF03979 Sigma-70 factor, region 1.1 CR541_RS07180 PF08275 DNA primase catalytic core, N-terminal domain CR541_RS07180 PF10410 DnaB-helicase binding domain of primase CR541_RS07180 PF01807 CHC2 zinc finger CR541_RS07185 PF01741 Large-conductance mechanosensitive channel, MscL CR541_RS07190 PF16363 GDP-mannose 4,6 dehydratase CR541_RS07195 PF01165 Ribosomal protein S21 CR541_RS07205 PF13344 Haloacid dehalogenase-like hydrolase CR541_RS07210 PF00293 NUDIX domain CR541_RS07220 PF04055 Radical SAM superfamily CR541_RS07220 PF06969 HemN C-terminal domain CR541_RS07230 PF00343 Carbohydrate phosphorylase CR541_RS07235 PF01048 Phosphorylase superfamily CR541_RS07240 PF01048 Phosphorylase superfamily CR541_RS07250 PF01676 Metalloenzyme superfamily CR541_RS07255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CR541_RS07260 PF01420 Type I restriction modification DNA specificity domain CR541_RS07265 PF01420 Type I restriction modification DNA specificity domain CR541_RS07270 PF02384 N-6 DNA Methylase CR541_RS07270 PF12161 HsdM N-terminal domain CR541_RS07275 PF00271 Helicase conserved C-terminal domain CR541_RS07275 PF08463 EcoEI R protein C-terminal CR541_RS07275 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CR541_RS07275 PF04851 Type III restriction enzyme, res subunit CR541_RS07280 PF12631 MnmE helical domain CR541_RS07280 PF01926 50S ribosome-binding GTPase CR541_RS07280 PF10396 GTP-binding protein TrmE N-terminus CR541_RS07295 PF15975 Flotillin CR541_RS07295 PF01145 SPFH domain / Band 7 family CR541_RS07300 PF04011 LemA family CR541_RS07310 PF03167 Uracil DNA glycosylase superfamily CR541_RS07320 PF01546 Peptidase family M20/M25/M40 CR541_RS07325 PF00375 Sodium:dicarboxylate symporter family CR541_RS07345 PF08241 Methyltransferase domain CR541_RS07350 PF12848 ABC transporter CR541_RS07350 PF00005 ABC transporter CR541_RS07355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR541_RS07355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR541_RS07355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR541_RS07355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR541_RS07365 PF02457 DisA bacterial checkpoint controller nucleotide-binding CR541_RS07370 PF08353 Domain of unknown function (DUF1727) CR541_RS07370 PF08245 Mur ligase middle domain CR541_RS07375 PF07685 CobB/CobQ-like glutamine amidotransferase domain CR541_RS07385 PF13847 Methyltransferase domain CR541_RS07400 PF00005 ABC transporter CR541_RS07400 PF12848 ABC transporter CR541_RS07400 PF16326 ABC transporter C-terminal domain CR541_RS07415 PF00756 Putative esterase CR541_RS07420 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CR541_RS07420 PF17770 Ribonuclease J C-terminal domain CR541_RS07420 PF00753 Metallo-beta-lactamase superfamily CR541_RS07440 PF08402 TOBE domain CR541_RS07440 PF00005 ABC transporter CR541_RS07455 PF00232 Glycosyl hydrolase family 1 CR541_RS07460 PF02378 Phosphotransferase system, EIIC CR541_RS07460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR541_RS07460 PF00367 phosphotransferase system, EIIB CR541_RS07465 PF00874 PRD domain CR541_RS07465 PF03123 CAT RNA binding domain CR541_RS07470 PF05670 NFACT protein RNA binding domain CR541_RS07475 PF03306 Alpha-acetolactate decarboxylase CR541_RS07485 PF01594 AI-2E family transporter CR541_RS07490 PF10282 Lactonase, 7-bladed beta-propeller CR541_RS07500 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS07515 PF00113 Enolase, C-terminal TIM barrel domain CR541_RS07515 PF03952 Enolase, N-terminal domain CR541_RS07530 PF02595 Glycerate kinase family CR541_RS07535 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS07550 PF06160 Septation ring formation regulator, EzrA CR541_RS07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS07555 PF00986 DNA gyrase B subunit, carboxyl terminus CR541_RS07555 PF01751 Toprim domain CR541_RS07555 PF00204 DNA gyrase B CR541_RS07560 PF01965 DJ-1/PfpI family CR541_RS07565 PF01098 Cell cycle protein CR541_RS07570 PF00589 Phage integrase family CR541_RS07645 PF01381 Helix-turn-helix CR541_RS07655 PF00589 Phage integrase family CR541_RS07655 PF14659 Phage integrase, N-terminal SAM-like domain CR541_RS07660 PF01197 Ribosomal protein L31 CR541_RS07665 PF02424 ApbE family CR541_RS07670 PF01368 DHH family CR541_RS07670 PF02272 DHHA1 domain CR541_RS07675 PF00258 Flavodoxin CR541_RS07680 PF00253 Ribosomal protein S14p/S29e CR541_RS07685 PF01817 Chorismate mutase type II CR541_RS07685 PF02153 Prephenate dehydrogenase CR541_RS07690 PF00654 Voltage gated chloride channel CR541_RS07700 PF02872 5'-nucleotidase, C-terminal domain CR541_RS07700 PF17936 Bacterial Ig domain CR541_RS07700 PF00149 Calcineurin-like phosphoesterase CR541_RS07705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CR541_RS07705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CR541_RS07710 PF06144 DNA polymerase III, delta subunit CR541_RS07720 PF02677 Epoxyqueuosine reductase QueH CR541_RS07725 PF00005 ABC transporter CR541_RS07730 PF00005 ABC transporter CR541_RS07730 PF12399 Branched-chain amino acid ATP-binding cassette transporter CR541_RS07735 PF11862 Domain of unknown function (DUF3382) CR541_RS07735 PF02653 Branched-chain amino acid transport system / permease component CR541_RS07740 PF02653 Branched-chain amino acid transport system / permease component CR541_RS07745 PF13458 Periplasmic binding protein CR541_RS07750 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CR541_RS07755 PF00574 Clp protease CR541_RS07765 PF00128 Alpha amylase, catalytic domain CR541_RS07765 PF16657 Maltogenic Amylase, C-terminal domain CR541_RS07770 PF00128 Alpha amylase, catalytic domain CR541_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS07785 PF01547 Bacterial extracellular solute-binding protein CR541_RS07790 PF16874 Glycosyl hydrolase family 36 C-terminal domain CR541_RS07790 PF16875 Glycosyl hydrolase family 36 N-terminal domain CR541_RS07795 PF12833 Helix-turn-helix domain CR541_RS07795 PF02311 AraC-like ligand binding domain CR541_RS07800 PF00155 Aminotransferase class I and II CR541_RS07805 PF01053 Cys/Met metabolism PLP-dependent enzyme CR541_RS07825 PF05175 Methyltransferase small domain CR541_RS07830 PF01541 GIY-YIG catalytic domain CR541_RS07840 PF02525 Flavodoxin-like fold CR541_RS07855 PF01022 Bacterial regulatory protein, arsR family CR541_RS07860 PF00270 DEAD/DEAH box helicase CR541_RS07860 PF00271 Helicase conserved C-terminal domain CR541_RS07870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR541_RS07870 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR541_RS07875 PF08000 Bacterial PH domain CR541_RS07900 PF01048 Phosphorylase superfamily CR541_RS07910 PF00293 NUDIX domain CR541_RS07915 PF12804 MobA-like NTP transferase domain CR541_RS07915 PF00132 Bacterial transferase hexapeptide (six repeats) CR541_RS07915 PF14602 Hexapeptide repeat of succinyl-transferase CR541_RS07965 PF02687 FtsX-like permease family CR541_RS07970 PF00005 ABC transporter CR541_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS07980 PF00072 Response regulator receiver domain CR541_RS07980 PF00486 Transcriptional regulatory protein, C terminal CR541_RS07990 PF00155 Aminotransferase class I and II CR541_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS08005 PF00571 CBS domain CR541_RS08005 PF00005 ABC transporter CR541_RS08025 PF01790 Prolipoprotein diacylglyceryl transferase CR541_RS08030 PF02603 HPr Serine kinase N terminus CR541_RS08030 PF07475 HPr Serine kinase C-terminal domain CR541_RS08035 PF01238 Phosphomannose isomerase type I CR541_RS08060 PF10263 SprT-like family CR541_RS08060 PF17283 SprT-like zinc ribbon domain CR541_RS08065 PF17674 HHH domain CR541_RS08065 PF16921 Tex protein YqgF-like domain CR541_RS08065 PF09371 Tex-like protein N-terminal domain CR541_RS08065 PF00575 S1 RNA binding domain CR541_RS08070 PF00248 Aldo/keto reductase family CR541_RS08075 PF06177 QueT transporter CR541_RS08080 PF04138 GtrA-like protein CR541_RS08090 PF00557 Metallopeptidase family M24 CR541_RS08100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR541_RS08105 PF02525 Flavodoxin-like fold CR541_RS08110 PF02773 S-adenosylmethionine synthetase, C-terminal domain CR541_RS08110 PF02772 S-adenosylmethionine synthetase, central domain CR541_RS08110 PF00438 S-adenosylmethionine synthetase, N-terminal domain CR541_RS08115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CR541_RS08125 PF05343 M42 glutamyl aminopeptidase CR541_RS08140 PF12169 DNA polymerase III subunits gamma and tau domain III CR541_RS08145 PF13185 GAF domain CR541_RS08155 PF10400 Virulence activator alpha C-term CR541_RS08155 PF03551 Transcriptional regulator PadR-like family CR541_RS08160 PF00485 Phosphoribulokinase / Uridine kinase family CR541_RS08170 PF00270 DEAD/DEAH box helicase CR541_RS08170 PF00271 Helicase conserved C-terminal domain CR541_RS08175 PF01522 Polysaccharide deacetylase CR541_RS08175 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CR541_RS08195 PF00300 Histidine phosphatase superfamily (branch 1) CR541_RS08200 PF00108 Thiolase, N-terminal domain CR541_RS08200 PF02803 Thiolase, C-terminal domain CR541_RS08205 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CR541_RS08205 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CR541_RS08210 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CR541_RS08235 PF00216 Bacterial DNA-binding protein CR541_RS08245 PF13472 GDSL-like Lipase/Acylhydrolase family CR541_RS08250 PF02645 Uncharacterised protein, DegV family COG1307 CR541_RS08255 PF13476 AAA domain CR541_RS08260 PF02863 Arginine repressor, C-terminal domain CR541_RS08260 PF01316 Arginine repressor, DNA binding domain CR541_RS08265 PF01479 S4 domain CR541_RS08265 PF01728 FtsJ-like methyltransferase CR541_RS08270 PF00348 Polyprenyl synthetase CR541_RS08275 PF02609 Exonuclease VII small subunit CR541_RS08280 PF02601 Exonuclease VII, large subunit CR541_RS08280 PF13742 OB-fold nucleic acid binding domain CR541_RS08285 PF04228 Putative neutral zinc metallopeptidase CR541_RS08290 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CR541_RS08295 PF00512 His Kinase A (phospho-acceptor) domain CR541_RS08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS08295 PF00672 HAMP domain CR541_RS08300 PF00072 Response regulator receiver domain CR541_RS08300 PF00486 Transcriptional regulatory protein, C terminal CR541_RS08325 PF01368 DHH family CR541_RS08325 PF02833 DHHA2 domain CR541_RS08335 PF04055 Radical SAM superfamily CR541_RS08340 PF00571 CBS domain CR541_RS08340 PF01595 Cyclin M transmembrane N-terminal domain CR541_RS08340 PF03471 Transporter associated domain CR541_RS08345 PF00005 ABC transporter CR541_RS08350 PF06962 Putative rRNA methylase CR541_RS08360 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CR541_RS08360 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CR541_RS08360 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CR541_RS08365 PF02540 NAD synthase CR541_RS08375 PF04055 Radical SAM superfamily CR541_RS08380 PF06265 Protein of unknown function (DUF1027) CR541_RS08385 PF05362 Lon protease (S16) C-terminal proteolytic domain CR541_RS08385 PF13180 PDZ domain CR541_RS08390 PF01467 Cytidylyltransferase-like CR541_RS08405 PF00581 Rhodanese-like domain CR541_RS08410 PF06014 Bacterial protein of unknown function (DUF910) CR541_RS08415 PF00072 Response regulator receiver domain CR541_RS08415 PF00196 Bacterial regulatory proteins, luxR family CR541_RS08420 PF13185 GAF domain CR541_RS08420 PF07730 Histidine kinase CR541_RS08430 PF00005 ABC transporter CR541_RS08435 PF00210 Ferritin-like domain CR541_RS08440 PF05532 CsbD-like CR541_RS08445 PF01451 Low molecular weight phosphotyrosine protein phosphatase CR541_RS08455 PF01757 Acyltransferase family CR541_RS08460 PF01569 PAP2 superfamily CR541_RS08465 PF12822 ECF transporter, substrate-specific component CR541_RS08470 PF00588 SpoU rRNA Methylase family CR541_RS08480 PF01809 Putative membrane protein insertion efficiency factor CR541_RS08485 PF01479 S4 domain CR541_RS08485 PF00849 RNA pseudouridylate synthase CR541_RS08490 PF04079 Segregation and condensation complex subunit ScpB CR541_RS08495 PF02616 Segregation and condensation protein ScpA CR541_RS08500 PF00589 Phage integrase family CR541_RS08515 PF01725 Ham1 family CR541_RS08520 PF01177 Asp/Glu/Hydantoin racemase CR541_RS08525 PF03672 Uncharacterised protein family (UPF0154) CR541_RS08530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CR541_RS08530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CR541_RS08535 PF03051 Peptidase C1-like family CR541_RS08540 PF01027 Inhibitor of apoptosis-promoting Bax1 CR541_RS08550 PF00588 SpoU rRNA Methylase family CR541_RS08550 PF08032 RNA 2'-O ribose methyltransferase substrate binding CR541_RS08555 PF00708 Acylphosphatase CR541_RS08560 PF02096 60Kd inner membrane protein CR541_RS08565 PF03449 Transcription elongation factor, N-terminal CR541_RS08565 PF01272 Transcription elongation factor, GreA/GreB, C-term CR541_RS08570 PF02618 YceG-like family CR541_RS08580 PF02875 Mur ligase family, glutamate ligase domain CR541_RS08580 PF01225 Mur ligase family, catalytic domain CR541_RS08580 PF08245 Mur ligase middle domain CR541_RS08590 PF00176 SNF2 family N-terminal domain CR541_RS08590 PF00271 Helicase conserved C-terminal domain CR541_RS08590 PF04434 SWIM zinc finger CR541_RS08605 PF01926 50S ribosome-binding GTPase CR541_RS08605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CR541_RS08610 PF00881 Nitroreductase family CR541_RS08615 PF00881 Nitroreductase family CR541_RS08620 PF07319 Primosomal protein DnaI N-terminus CR541_RS08620 PF01695 IstB-like ATP binding protein CR541_RS08630 PF03477 ATP cone domain CR541_RS08635 PF01594 AI-2E family transporter CR541_RS08640 PF00072 Response regulator receiver domain CR541_RS08640 PF00486 Transcriptional regulatory protein, C terminal CR541_RS08645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CR541_RS08645 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CR541_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS08665 PF00270 DEAD/DEAH box helicase CR541_RS08665 PF00271 Helicase conserved C-terminal domain CR541_RS08675 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CR541_RS08675 PF00953 Glycosyl transferase family 4 CR541_RS08680 PF03717 Penicillin-binding Protein dimerisation domain CR541_RS08680 PF00905 Penicillin binding protein transpeptidase domain CR541_RS08680 PF03793 PASTA domain CR541_RS08690 PF01795 MraW methylase family CR541_RS08740 PF02424 ApbE family CR541_RS08745 PF04205 FMN-binding domain CR541_RS08750 PF00348 Polyprenyl synthetase CR541_RS08755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS08770 PF02386 Cation transport protein CR541_RS08775 PF02080 TrkA-C domain CR541_RS08775 PF02254 TrkA-N domain CR541_RS08780 PF01554 MatE CR541_RS08790 PF05979 Bacterial protein of unknown function (DUF896) CR541_RS08795 PF02092 Glycyl-tRNA synthetase beta subunit CR541_RS08800 PF02091 Glycyl-tRNA synthetase alpha subunit CR541_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS08820 PF00005 ABC transporter CR541_RS08820 PF09383 NIL domain CR541_RS08825 PF01546 Peptidase family M20/M25/M40 CR541_RS08825 PF07687 Peptidase dimerisation domain CR541_RS08830 PF03180 NLPA lipoprotein CR541_RS08835 PF07722 Peptidase C26 CR541_RS08840 PF08267 Cobalamin-independent synthase, N-terminal domain CR541_RS08840 PF01717 Cobalamin-independent synthase, Catalytic domain CR541_RS08845 PF02219 Methylenetetrahydrofolate reductase CR541_RS08850 PF00860 Permease family CR541_RS08860 PF03830 PTS system sorbose subfamily IIB component CR541_RS08860 PF03610 PTS system fructose IIA component CR541_RS08865 PF03609 PTS system sorbose-specific iic component CR541_RS08870 PF03613 PTS system mannose/fructose/sorbose family IID component CR541_RS08880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR541_RS08880 PF02403 Seryl-tRNA synthetase N-terminal domain CR541_RS08885 PF12161 HsdM N-terminal domain CR541_RS08885 PF02384 N-6 DNA Methylase CR541_RS08895 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CR541_RS08895 PF18766 SWI2/SNF2 ATPase CR541_RS08895 PF12008 Type I restriction and modification enzyme - subunit R C terminal CR541_RS08930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CR541_RS08935 PF01039 Carboxyl transferase domain CR541_RS08940 PF02785 Biotin carboxylase C-terminal domain CR541_RS08940 PF00289 Biotin carboxylase, N-terminal domain CR541_RS08940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR541_RS08945 PF07977 FabA-like domain CR541_RS08950 PF00364 Biotin-requiring enzyme CR541_RS08955 PF02801 Beta-ketoacyl synthase, C-terminal domain CR541_RS08955 PF00109 Beta-ketoacyl synthase, N-terminal domain CR541_RS08965 PF00698 Acyl transferase domain CR541_RS08970 PF03060 Nitronate monooxygenase CR541_RS08975 PF00550 Phosphopantetheine attachment site CR541_RS08980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CR541_RS08980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CR541_RS08990 PF00378 Enoyl-CoA hydratase/isomerase CR541_RS08995 PF13419 Haloacid dehalogenase-like hydrolase CR541_RS09000 PF00696 Amino acid kinase family CR541_RS09000 PF13840 ACT domain CR541_RS09015 PF01168 Alanine racemase, N-terminal domain CR541_RS09015 PF00842 Alanine racemase, C-terminal domain CR541_RS09020 PF01648 4'-phosphopantetheinyl transferase superfamily CR541_RS09025 PF02810 SEC-C motif CR541_RS09025 PF07516 SecA Wing and Scaffold domain CR541_RS09025 PF01043 SecA preprotein cross-linking domain CR541_RS09025 PF07517 SecA DEAD-like domain CR541_RS09035 PF00480 ROK family CR541_RS09040 PF02378 Phosphotransferase system, EIIC CR541_RS09040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR541_RS09040 PF00367 phosphotransferase system, EIIB CR541_RS09045 PF08244 Glycosyl hydrolases family 32 C terminal CR541_RS09045 PF00251 Glycosyl hydrolases family 32 N-terminal domain CR541_RS09050 PF00356 Bacterial regulatory proteins, lacI family CR541_RS09055 PF01029 NusB family CR541_RS09060 PF03780 Asp23 family, cell envelope-related function CR541_RS09065 PF01132 Elongation factor P (EF-P) OB domain CR541_RS09065 PF08207 Elongation factor P (EF-P) KOW-like domain CR541_RS09065 PF09285 Elongation factor P, C-terminal CR541_RS09070 PF01321 Creatinase/Prolidase N-terminal domain CR541_RS09070 PF00557 Metallopeptidase family M24 CR541_RS09075 PF00005 ABC transporter CR541_RS09075 PF17760 UvrA interaction domain CR541_RS09075 PF17755 UvrA DNA-binding domain CR541_RS09090 PF01084 Ribosomal protein S18 CR541_RS09095 PF00436 Single-strand binding protein family CR541_RS09100 PF01250 Ribosomal protein S6 CR541_RS09105 PF00665 Integrase core domain CR541_RS09105 PF13936 Helix-turn-helix domain CR541_RS09110 PF03099 Biotin/lipoate A/B protein ligase family CR541_RS09110 PF10437 Bacterial lipoate protein ligase C-terminus CR541_RS09120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR541_RS09120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS09125 PF00364 Biotin-requiring enzyme CR541_RS09125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CR541_RS09125 PF02817 e3 binding domain CR541_RS09130 PF02780 Transketolase, C-terminal domain CR541_RS09130 PF00364 Biotin-requiring enzyme CR541_RS09130 PF02779 Transketolase, pyrimidine binding domain CR541_RS09135 PF00676 Dehydrogenase E1 component CR541_RS09145 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 CR541_RS09155 PF02033 Ribosome-binding factor A CR541_RS09160 PF00009 Elongation factor Tu GTP binding domain CR541_RS09160 PF11987 Translation-initiation factor 2 CR541_RS09160 PF04760 Translation initiation factor IF-2, N-terminal region CR541_RS09165 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CR541_RS09170 PF04296 Protein of unknown function (DUF448) CR541_RS09175 PF13184 NusA-like KH domain CR541_RS09175 PF08529 NusA N-terminal domain CR541_RS09175 PF00575 S1 RNA binding domain CR541_RS09180 PF17384 RimP C-terminal SH3 domain CR541_RS09180 PF02576 RimP N-terminal domain CR541_RS09190 PF02390 Putative methyltransferase CR541_RS09200 PF05975 Bacterial ABC transporter protein EcsB CR541_RS09205 PF00005 ABC transporter CR541_RS09210 PF01230 HIT domain CR541_RS09220 PF03816 Cell envelope-related transcriptional attenuator domain CR541_RS09230 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CR541_RS09235 PF02734 DAK2 domain CR541_RS09235 PF13684 Dihydroxyacetone kinase family CR541_RS09240 PF03780 Asp23 family, cell envelope-related function CR541_RS09250 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS09260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CR541_RS09260 PF00005 ABC transporter CR541_RS09265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CR541_RS09265 PF00005 ABC transporter CR541_RS09270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CR541_RS09275 PF07943 Penicillin-binding protein 5, C-terminal domain CR541_RS09275 PF00768 D-alanyl-D-alanine carboxypeptidase CR541_RS09280 PF01458 Uncharacterized protein family (UPF0051) CR541_RS09285 PF01592 NifU-like N terminal domain CR541_RS09290 PF00266 Aminotransferase class-V CR541_RS09295 PF01458 Uncharacterized protein family (UPF0051) CR541_RS09300 PF00005 ABC transporter CR541_RS09305 PF00953 Glycosyl transferase family 4 CR541_RS09310 PF05389 Negative regulator of genetic competence (MecA) CR541_RS09315 PF02673 Bacitracin resistance protein BacA CR541_RS09320 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS09325 PF00005 ABC transporter CR541_RS09340 PF00585 C-terminal regulatory domain of Threonine dehydratase CR541_RS09340 PF00291 Pyridoxal-phosphate dependent enzyme CR541_RS09345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CR541_RS09345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CR541_RS09350 PF10369 Small subunit of acetolactate synthase CR541_RS09350 PF01842 ACT domain CR541_RS09355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CR541_RS09355 PF00205 Thiamine pyrophosphate enzyme, central domain CR541_RS09355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CR541_RS09375 PF00920 Dehydratase family CR541_RS09385 PF01883 Iron-sulfur cluster assembly protein CR541_RS09395 PF00380 Ribosomal protein S9/S16 CR541_RS09400 PF00572 Ribosomal protein L13 CR541_RS09410 PF02645 Uncharacterised protein, DegV family COG1307 CR541_RS09420 PF08032 RNA 2'-O ribose methyltransferase substrate binding CR541_RS09420 PF00588 SpoU rRNA Methylase family CR541_RS09445 PF03459 TOBE domain CR541_RS09445 PF17912 MalK OB fold domain CR541_RS09445 PF00005 ABC transporter CR541_RS09450 PF13556 PucR C-terminal helix-turn-helix domain CR541_RS09455 PF00072 Response regulator receiver domain CR541_RS09455 PF12833 Helix-turn-helix domain CR541_RS09460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR541_RS09460 PF06580 Histidine kinase CR541_RS09460 PF02743 Cache domain CR541_RS09460 PF00672 HAMP domain CR541_RS09480 PF12010 Domain of unknown function (DUF3502) CR541_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS09500 PF00480 ROK family CR541_RS09505 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain CR541_RS09505 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 CR541_RS09505 PF07748 Glycosyl hydrolases family 38 C-terminal domain CR541_RS09505 PF01074 Glycosyl hydrolases family 38 N-terminal domain CR541_RS09505 PF09261 Alpha mannosidase middle domain CR541_RS09525 PF00636 Ribonuclease III domain CR541_RS09530 PF09190 DALR domain CR541_RS09530 PF01406 tRNA synthetases class I (C) catalytic domain CR541_RS09545 PF00132 Bacterial transferase hexapeptide (six repeats) CR541_RS09550 PF03725 3' exoribonuclease family, domain 2 CR541_RS09550 PF00575 S1 RNA binding domain CR541_RS09550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CR541_RS09550 PF00013 KH domain CR541_RS09550 PF01138 3' exoribonuclease family, domain 1 CR541_RS09575 PF02378 Phosphotransferase system, EIIC CR541_RS09575 PF00367 phosphotransferase system, EIIB CR541_RS09580 PF13580 SIS domain CR541_RS09585 PF01380 SIS domain CR541_RS09585 PF01418 Helix-turn-helix domain, rpiR family CR541_RS09590 PF00312 Ribosomal protein S15 CR541_RS09595 PF00860 Permease family CR541_RS09610 PF00849 RNA pseudouridylate synthase CR541_RS09610 PF01479 S4 domain CR541_RS09630 PF01327 Polypeptide deformylase CR541_RS09640 PF00694 Aconitase C-terminal domain CR541_RS09645 PF00330 Aconitase family (aconitate hydratase) CR541_RS09650 PF00180 Isocitrate/isopropylmalate dehydrogenase CR541_RS09655 PF00682 HMGL-like CR541_RS09655 PF08502 LeuA allosteric (dimerisation) domain CR541_RS09665 PF02073 Thermophilic metalloprotease (M29) CR541_RS09685 PF00929 Exonuclease CR541_RS09685 PF02811 PHP domain CR541_RS09685 PF14480 DNA polymerase III polC-type N-terminus I CR541_RS09685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CR541_RS09685 PF11490 DNA polymerase III polC-type N-terminus II CR541_RS09685 PF07733 Bacterial DNA polymerase III alpha NTPase domain CR541_RS09690 PF02733 Dak1 domain CR541_RS09700 PF02733 Dak1 domain CR541_RS09705 PF02734 DAK2 domain CR541_RS09710 PF03610 PTS system fructose IIA component CR541_RS09715 PF00230 Major intrinsic protein CR541_RS09720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR541_RS09720 PF03129 Anticodon binding domain CR541_RS09720 PF04073 Aminoacyl-tRNA editing domain CR541_RS09725 PF13180 PDZ domain CR541_RS09725 PF02163 Peptidase family M50 CR541_RS09735 PF01255 Putative undecaprenyl diphosphate synthase CR541_RS09740 PF02699 Preprotein translocase subunit CR541_RS09745 PF00709 Adenylosuccinate synthetase CR541_RS09750 PF04262 Glutamate-cysteine ligase CR541_RS09750 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CR541_RS09750 PF18419 ATP-grasp-like domain CR541_RS09760 PF01430 Hsp33 protein CR541_RS09765 PF01207 Dihydrouridine synthase (Dus) CR541_RS09780 PF01467 Cytidylyltransferase-like CR541_RS09785 PF10431 C-terminal, D2-small domain, of ClpB protein CR541_RS09785 PF07724 AAA domain (Cdc48 subfamily) CR541_RS09785 PF00004 ATPase family associated with various cellular activities (AAA) CR541_RS09785 PF17871 AAA lid domain CR541_RS09785 PF02861 Clp amino terminal domain, pathogenicity island component CR541_RS09790 PF05848 CtsR N-terminal HTH domain CR541_RS09790 PF17727 CtsR C-terminal dimerization domain CR541_RS09805 PF00889 Elongation factor TS CR541_RS09810 PF00318 Ribosomal protein S2 CR541_RS09825 PF02225 PA domain CR541_RS09825 PF00746 LPXTG cell wall anchor motif CR541_RS09825 PF00082 Subtilase family CR541_RS09825 PF06280 Fn3-like domain CR541_RS09830 PF00467 KOW motif CR541_RS09830 PF02357 Transcription termination factor nusG CR541_RS09840 PF00471 Ribosomal protein L33 CR541_RS09845 PF00905 Penicillin binding protein transpeptidase domain CR541_RS09845 PF00912 Transglycosylase CR541_RS09850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR541_RS09855 PF01479 S4 domain CR541_RS09855 PF00849 RNA pseudouridylate synthase CR541_RS09860 PF09182 Bacterial purine repressor, N-terminal CR541_RS09860 PF00156 Phosphoribosyl transferase domain CR541_RS09870 PF01966 HD domain CR541_RS09870 PF01336 OB-fold nucleic acid binding domain CR541_RS09875 PF02646 RmuC family CR541_RS09880 PF04263 Thiamin pyrophosphokinase, catalytic domain CR541_RS09880 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CR541_RS09885 PF00834 Ribulose-phosphate 3 epimerase family CR541_RS09890 PF03193 RsgA GTPase CR541_RS09890 PF16745 RsgA N-terminal domain CR541_RS09900 PF00664 ABC transporter transmembrane region CR541_RS09900 PF00005 ABC transporter CR541_RS09900 PF03412 Peptidase C39 family CR541_RS09930 PF00398 Ribosomal RNA adenine dimethylase CR541_RS09940 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CR541_RS09950 PF00293 NUDIX domain CR541_RS09950 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CR541_RS09950 PF09297 NADH pyrophosphatase zinc ribbon domain CR541_RS09970 PF13331 Domain of unknown function (DUF4093) CR541_RS09975 PF01026 TatD related DNase CR541_RS09980 PF00468 Ribosomal protein L34 CR541_RS09985 PF14804 Jag N-terminus CR541_RS09985 PF01424 R3H domain CR541_RS09990 PF02096 60Kd inner membrane protein CR541_RS09995 PF00825 Ribonuclease P CR541_RS10000 PF14698 Argininosuccinate lyase C-terminal CR541_RS10000 PF00206 Lyase CR541_RS10005 PF00764 Arginosuccinate synthase CR541_RS10015 PF02829 3H domain CR541_RS10015 PF08279 HTH domain CR541_RS10030 PF02574 Homocysteine S-methyltransferase CR541_RS10035 PF00324 Amino acid permease CR541_RS10040 PF00749 tRNA synthetases class I (E and Q), catalytic domain CR541_RS10060 PF01987 Mitochondrial biogenesis AIM24 CR541_RS10065 PF00484 Carbonic anhydrase CR541_RS10070 PF18073 Rubredoxin metal binding domain CR541_RS10080 PF00692 dUTPase CR541_RS10085 PF00664 ABC transporter transmembrane region CR541_RS10085 PF00005 ABC transporter CR541_RS10090 PF00664 ABC transporter transmembrane region CR541_RS10090 PF00005 ABC transporter CR541_RS10100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CR541_RS10100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CR541_RS10105 PF00483 Nucleotidyl transferase CR541_RS10110 PF01694 Rhomboid family CR541_RS10115 PF01812 5-formyltetrahydrofolate cyclo-ligase family CR541_RS10120 PF07687 Peptidase dimerisation domain CR541_RS10120 PF01546 Peptidase family M20/M25/M40 CR541_RS10125 PF00132 Bacterial transferase hexapeptide (six repeats) CR541_RS10125 PF14602 Hexapeptide repeat of succinyl-transferase CR541_RS10125 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CR541_RS10140 PF00149 Calcineurin-like phosphoesterase CR541_RS10145 PF00342 Phosphoglucose isomerase CR541_RS10160 PF14437 MafB19-like deaminase CR541_RS10165 PF00456 Transketolase, thiamine diphosphate binding domain CR541_RS10165 PF02780 Transketolase, C-terminal domain CR541_RS10165 PF02779 Transketolase, pyrimidine binding domain CR541_RS10185 PF00596 Class II Aldolase and Adducin N-terminal domain CR541_RS10190 PF01261 Xylose isomerase-like TIM barrel CR541_RS10195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CR541_RS10200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR541_RS10205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS10210 PF03611 PTS system sugar-specific permease component CR541_RS10215 PF17999 Pullulanase N1-terminal domain CR541_RS10215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR541_RS10215 PF00128 Alpha amylase, catalytic domain CR541_RS10220 PF00356 Bacterial regulatory proteins, lacI family CR541_RS10225 PF00005 ABC transporter CR541_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS10235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR541_RS10240 PF01476 LysM domain CR541_RS10240 PF05257 CHAP domain CR541_RS10245 PF02378 Phosphotransferase system, EIIC CR541_RS10255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR541_RS10260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR541_RS10265 PF08279 HTH domain CR541_RS10265 PF05043 Mga helix-turn-helix domain CR541_RS10265 PF00874 PRD domain CR541_RS10265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR541_RS10280 PF02056 Family 4 glycosyl hydrolase CR541_RS10280 PF11975 Family 4 glycosyl hydrolase C-terminal domain CR541_RS10285 PF13603 Leucyl-tRNA synthetase, Domain 2 CR541_RS10285 PF08264 Anticodon-binding domain of tRNA CR541_RS10285 PF09334 tRNA synthetases class I (M) CR541_RS10285 PF00133 tRNA synthetases class I (I, L, M and V) CR541_RS10290 PF01431 Peptidase family M13 CR541_RS10290 PF05649 Peptidase family M13 CR541_RS10295 PF00950 ABC 3 transport family CR541_RS10300 PF00950 ABC 3 transport family CR541_RS10305 PF00005 ABC transporter CR541_RS10320 PF01297 Zinc-uptake complex component A periplasmic CR541_RS10355 PF02580 D-Tyr-tRNA(Tyr) deacylase CR541_RS10360 PF13291 ACT domain CR541_RS10360 PF02824 TGS domain CR541_RS10360 PF04607 Region found in RelA / SpoT proteins CR541_RS10365 PF02872 5'-nucleotidase, C-terminal domain CR541_RS10365 PF00149 Calcineurin-like phosphoesterase CR541_RS10425 PF04452 RNA methyltransferase CR541_RS10450 PF16193 AAA C-terminal domain CR541_RS10450 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR541_RS10450 PF12002 MgsA AAA+ ATPase C terminal CR541_RS10480 PF00149 Calcineurin-like phosphoesterase CR541_RS10480 PF02872 5'-nucleotidase, C-terminal domain CR541_RS10490 PF03477 ATP cone domain CR541_RS10490 PF13597 Anaerobic ribonucleoside-triphosphate reductase CR541_RS10510 PF04397 LytTr DNA-binding domain CR541_RS10515 PF05190 MutS family domain IV CR541_RS10515 PF00488 MutS domain V CR541_RS10515 PF01624 MutS domain I CR541_RS10515 PF05188 MutS domain II CR541_RS10515 PF05192 MutS domain III CR541_RS10520 PF02863 Arginine repressor, C-terminal domain CR541_RS10520 PF01316 Arginine repressor, DNA binding domain CR541_RS10525 PF03485 Arginyl tRNA synthetase N terminal domain CR541_RS10525 PF00750 tRNA synthetases class I (R) CR541_RS10525 PF05746 DALR anticodon binding domain CR541_RS10545 PF02446 4-alpha-glucanotransferase CR541_RS10550 PF13416 Bacterial extracellular solute-binding protein CR541_RS10555 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS10560 PF00528 Binding-protein-dependent transport system inner membrane component CR541_RS10570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CR541_RS10570 PF00356 Bacterial regulatory proteins, lacI family CR541_RS10575 PF17999 Pullulanase N1-terminal domain CR541_RS10575 PF00128 Alpha amylase, catalytic domain CR541_RS10575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR541_RS10580 PF07972 NrdI Flavodoxin like CR541_RS10585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR541_RS10585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR541_RS10590 PF01336 OB-fold nucleic acid binding domain CR541_RS10590 PF00152 tRNA synthetases class II (D, K and N) CR541_RS10590 PF02938 GAD domain CR541_RS10595 PF13673 Acetyltransferase (GNAT) domain CR541_RS10600 PF00248 Aldo/keto reductase family CR541_RS10605 PF00535 Glycosyl transferase family 2 CR541_RS10610 PF14310 Fibronectin type III-like domain CR541_RS10610 PF00933 Glycosyl hydrolase family 3 N terminal domain CR541_RS10610 PF01915 Glycosyl hydrolase family 3 C-terminal domain CR541_RS10620 PF01915 Glycosyl hydrolase family 3 C-terminal domain CR541_RS10620 PF00933 Glycosyl hydrolase family 3 N terminal domain CR541_RS10620 PF14310 Fibronectin type III-like domain CR541_RS10625 PF01339 CheB methylesterase CR541_RS10625 PF00072 Response regulator receiver domain CR541_RS10640 PF14537 Cytochrome c3 CR541_RS10640 PF00890 FAD binding domain CR541_RS10650 PF00163 Ribosomal protein S4/S9 N-terminal domain CR541_RS10650 PF01479 S4 domain CR541_RS10665 PF00772 DnaB-like helicase N terminal domain CR541_RS10665 PF03796 DnaB-like helicase C terminal domain CR541_RS10670 PF03948 Ribosomal protein L9, C-terminal domain CR541_RS10670 PF01281 Ribosomal protein L9, N-terminal domain CR541_RS10675 PF01368 DHH family CR541_RS10675 PF02272 DHHA1 domain CR541_RS10680 PF01134 Glucose inhibited division protein A CR541_RS10680 PF13932 GidA associated domain CR541_RS10690 PF00293 NUDIX domain CR541_RS10695 PF00293 NUDIX domain CR541_RS10700 PF01638 HxlR-like helix-turn-helix CR541_RS10715 PF01842 ACT domain CR541_RS10715 PF03315 Serine dehydratase beta chain CR541_RS10720 PF03313 Serine dehydratase alpha chain CR541_RS10730 PF02361 Cobalt transport protein CR541_RS10735 PF00005 ABC transporter CR541_RS10740 PF00005 ABC transporter CR541_RS10745 PF01066 CDP-alcohol phosphatidyltransferase CR541_RS10750 PF13464 Domain of unknown function (DUF4115) CR541_RS10755 PF00675 Insulinase (Peptidase family M16) CR541_RS10755 PF05193 Peptidase M16 inactive domain CR541_RS10760 PF05193 Peptidase M16 inactive domain CR541_RS10770 PF02463 RecF/RecN/SMC N terminal domain CR541_RS10775 PF00571 CBS domain CR541_RS10775 PF00478 IMP dehydrogenase / GMP reductase domain CR541_RS10780 PF00579 tRNA synthetases class I (W and Y) CR541_RS10785 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR541_RS10785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR541_RS10790 PF00005 ABC transporter CR541_RS10790 PF12848 ABC transporter CR541_RS10820 PF02590 Predicted SPOUT methyltransferase CR541_RS10825 PF13180 PDZ domain CR541_RS10830 PF02195 ParB-like nuclease domain CR541_RS10830 PF17762 HTH domain found in ParB protein CR541_RS10835 PF14659 Phage integrase, N-terminal SAM-like domain CR541_RS10835 PF00589 Phage integrase family