CR541_RS00015	PWY-7039	phosphatidate metabolism, as a signaling molecule
CR541_RS00015	PWY-7817	CR541_RS00015
CR541_RS00035	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CR541_RS00070	PWY-6599	guanine and guanosine salvage II
CR541_RS00070	PWY-6609	adenine and adenosine salvage III
CR541_RS00070	PWY-6610	adenine and adenosine salvage IV
CR541_RS00070	PWY-6620	guanine and guanosine salvage
CR541_RS00230	PWY-6123	inosine-5'-phosphate biosynthesis I
CR541_RS00230	PWY-6124	inosine-5'-phosphate biosynthesis II
CR541_RS00230	PWY-7234	inosine-5'-phosphate biosynthesis III
CR541_RS00235	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS00235	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CR541_RS00235	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CR541_RS00240	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS00240	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CR541_RS00240	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CR541_RS00240	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CR541_RS00245	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS00245	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CR541_RS00245	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CR541_RS00250	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS00250	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CR541_RS00255	PWY-6123	inosine-5'-phosphate biosynthesis I
CR541_RS00255	PWY-6124	inosine-5'-phosphate biosynthesis II
CR541_RS00255	PWY-7234	inosine-5'-phosphate biosynthesis III
CR541_RS00260	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS00260	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CR541_RS00260	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CR541_RS00265	PWY-6123	inosine-5'-phosphate biosynthesis I
CR541_RS00265	PWY-7234	inosine-5'-phosphate biosynthesis III
CR541_RS00285	PWY-6123	inosine-5'-phosphate biosynthesis I
CR541_RS00285	PWY-6124	inosine-5'-phosphate biosynthesis II
CR541_RS00285	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS00285	PWY-7234	inosine-5'-phosphate biosynthesis III
CR541_RS00360	PWY-2161	folate polyglutamylation
CR541_RS00560	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS00835	PWY-5482	pyruvate fermentation to acetate II
CR541_RS00835	PWY-5485	pyruvate fermentation to acetate IV
CR541_RS00835	PWY-5497	purine nucleobases degradation II (anaerobic)
CR541_RS00845	PWY-2161	folate polyglutamylation
CR541_RS00850	PWY-5706	alliin metabolism
CR541_RS00850	PWY-5707	propanethial <i>S</i>-oxide biosynthesis
CR541_RS00850	PWY-7614	methiin metabolism
CR541_RS00930	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS00930	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS00930	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS00930	PWY-7003	glycerol degradation to butanol
CR541_RS00935	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS00935	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS00935	PWY-6886	1-butanol autotrophic biosynthesis
CR541_RS00935	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS00935	PWY-7003	glycerol degradation to butanol
CR541_RS00950	PWY-381	nitrate reduction II (assimilatory)
CR541_RS00950	PWY-5675	nitrate reduction V (assimilatory)
CR541_RS00950	PWY-6549	L-glutamine biosynthesis III
CR541_RS00950	PWY-6963	ammonia assimilation cycle I
CR541_RS00950	PWY-6964	ammonia assimilation cycle II
CR541_RS00965	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CR541_RS00965	PWY-5368	dimorphecolate biosynthesis
CR541_RS00965	PWY-5995	linoleate biosynthesis I (plants)
CR541_RS00965	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CR541_RS00965	PWY-6803	phosphatidylcholine acyl editing
CR541_RS00965	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CR541_RS00965	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CR541_RS00965	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CR541_RS00965	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CR541_RS00965	PWY-7470	phosphatidylcholine biosynthesis VII
CR541_RS00965	PWY-7618	ricinoleate biosynthesis
CR541_RS00975	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CR541_RS00975	PWY-5368	dimorphecolate biosynthesis
CR541_RS00975	PWY-5995	linoleate biosynthesis I (plants)
CR541_RS00975	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CR541_RS00975	PWY-6803	phosphatidylcholine acyl editing
CR541_RS00975	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CR541_RS00975	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CR541_RS00975	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CR541_RS00975	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CR541_RS00975	PWY-7470	phosphatidylcholine biosynthesis VII
CR541_RS00975	PWY-7618	ricinoleate biosynthesis
CR541_RS01000	PWY-6527	stachyose degradation
CR541_RS01075	PWY-6891	thiazole biosynthesis II (Bacillus)
CR541_RS01075	PWY-6892	thiazole biosynthesis I (E. coli)
CR541_RS01075	PWY-7560	methylerythritol phosphate pathway II
CR541_RS01125	PWY-5480	pyruvate fermentation to ethanol I
CR541_RS01125	PWY-5485	pyruvate fermentation to acetate IV
CR541_RS01125	PWY-5493	reductive monocarboxylic acid cycle
CR541_RS01200	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CR541_RS01200	PWY-6855	chitin degradation I (archaea)
CR541_RS01200	PWY-6906	chitin derivatives degradation
CR541_RS01255	PWY-6619	adenine and adenosine salvage VI
CR541_RS01470	PWY-3162	L-tryptophan degradation V (side chain pathway)
CR541_RS01470	PWY-5057	L-valine degradation II
CR541_RS01470	PWY-5076	L-leucine degradation III
CR541_RS01470	PWY-5078	L-isoleucine degradation II
CR541_RS01470	PWY-5079	L-phenylalanine degradation III
CR541_RS01470	PWY-5082	L-methionine degradation III
CR541_RS01470	PWY-5480	pyruvate fermentation to ethanol I
CR541_RS01470	PWY-5486	pyruvate fermentation to ethanol II
CR541_RS01470	PWY-5751	phenylethanol biosynthesis
CR541_RS01470	PWY-6313	serotonin degradation
CR541_RS01470	PWY-6333	acetaldehyde biosynthesis I
CR541_RS01470	PWY-6342	noradrenaline and adrenaline degradation
CR541_RS01470	PWY-6587	pyruvate fermentation to ethanol III
CR541_RS01470	PWY-6802	salidroside biosynthesis
CR541_RS01470	PWY-6871	3-methylbutanol biosynthesis
CR541_RS01470	PWY-7013	L-1,2-propanediol degradation
CR541_RS01470	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CR541_RS01470	PWY-7118	chitin degradation to ethanol
CR541_RS01470	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CR541_RS01510	PWY-6174	mevalonate pathway II (archaea)
CR541_RS01510	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS01510	PWY-922	mevalonate pathway I
CR541_RS01515	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS01515	PWY-922	mevalonate pathway I
CR541_RS01520	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS01520	PWY-922	mevalonate pathway I
CR541_RS01525	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CR541_RS01525	PWY-6174	mevalonate pathway II (archaea)
CR541_RS01525	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
CR541_RS01525	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CR541_RS01525	PWY-7102	bisabolene biosynthesis
CR541_RS01525	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS01525	PWY-7524	mevalonate pathway III (archaea)
CR541_RS01525	PWY-7560	methylerythritol phosphate pathway II
CR541_RS01525	PWY-922	mevalonate pathway I
CR541_RS01585	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CR541_RS01690	PWY-5098	chlorophyll <i>a</i> degradation I
CR541_RS01690	PWY-6927	chlorophyll <i>a</i> degradation II
CR541_RS01690	PWY-7164	chlorophyll <i>a</i> degradation III
CR541_RS01735	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CR541_RS01735	PWY-7177	UTP and CTP dephosphorylation II
CR541_RS01735	PWY-7185	UTP and CTP dephosphorylation I
CR541_RS01745	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS01745	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS01745	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS01745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS01745	PWY-7385	1,3-propanediol biosynthesis (engineered)
CR541_RS01840	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CR541_RS01860	PWY-3821	galactose degradation III
CR541_RS01860	PWY-6317	galactose degradation I (Leloir pathway)
CR541_RS01860	PWY-6527	stachyose degradation
CR541_RS01865	PWY-6317	galactose degradation I (Leloir pathway)
CR541_RS01865	PWY-6527	stachyose degradation
CR541_RS01905	PWY-5381	pyridine nucleotide cycling (plants)
CR541_RS01905	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CR541_RS01905	PWY-7761	CR541_RS01905
CR541_RS01990	PWY-5941	glycogen degradation II (eukaryotic)
CR541_RS01990	PWY-6724	starch degradation II
CR541_RS01990	PWY-6737	starch degradation V
CR541_RS01990	PWY-7238	sucrose biosynthesis II
CR541_RS01995	PWY-5941	glycogen degradation II (eukaryotic)
CR541_RS01995	PWY-6731	starch degradation III
CR541_RS01995	PWY-6737	starch degradation V
CR541_RS01995	PWY-7238	sucrose biosynthesis II
CR541_RS02010	PWY-5723	Rubisco shunt
CR541_RS02100	PWY-6825	phosphatidylcholine biosynthesis V
CR541_RS02110	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CR541_RS02110	PWY-6153	autoinducer AI-2 biosynthesis I
CR541_RS02110	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CR541_RS02120	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS02140	PWY-6825	phosphatidylcholine biosynthesis V
CR541_RS02180	PWY-6936	seleno-amino acid biosynthesis
CR541_RS02300	PWY-6807	xyloglucan degradation II (exoglucanase)
CR541_RS02325	PWY-6317	galactose degradation I (Leloir pathway)
CR541_RS02435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS02435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS02440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CR541_RS02440	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CR541_RS02440	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CR541_RS02440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CR541_RS02460	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CR541_RS02485	PWY-0	putrescine degradation III
CR541_RS02485	PWY-6117	spermine and spermidine degradation I
CR541_RS02525	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CR541_RS02525	PWY-2201	folate transformations I
CR541_RS02525	PWY-3841	folate transformations II
CR541_RS02525	PWY-5030	L-histidine degradation III
CR541_RS02525	PWY-5497	purine nucleobases degradation II (anaerobic)
CR541_RS02525	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CR541_RS02605	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CR541_RS02605	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CR541_RS02605	PWY-7717	CR541_RS02605
CR541_RS02605	PWY-7733	CR541_RS02605
CR541_RS02605	PWY-7734	CR541_RS02605
CR541_RS02605	PWY-7765	CR541_RS02605
CR541_RS02610	PWY-4081	glutathione redox reactions I
CR541_RS02685	PWY-1622	formaldehyde assimilation I (serine pathway)
CR541_RS02685	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CR541_RS02685	PWY-5913	TCA cycle VI (obligate autotrophs)
CR541_RS02685	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS02685	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CR541_RS02685	PWY-6549	L-glutamine biosynthesis III
CR541_RS02685	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CR541_RS02685	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CR541_RS02685	PWY-7124	ethylene biosynthesis V (engineered)
CR541_RS02705	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS02705	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS02705	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS02705	PWY-7003	glycerol degradation to butanol
CR541_RS02735	PWY-6609	adenine and adenosine salvage III
CR541_RS02735	PWY-6611	adenine and adenosine salvage V
CR541_RS02735	PWY-7179	purine deoxyribonucleosides degradation I
CR541_RS02735	PWY-7179-1	purine deoxyribonucleosides degradation
CR541_RS02760	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS02760	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS02760	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS02760	PWY-7385	1,3-propanediol biosynthesis (engineered)
CR541_RS02765	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS02765	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CR541_RS02765	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS02765	PWY-5723	Rubisco shunt
CR541_RS02765	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS02765	PWY-6886	1-butanol autotrophic biosynthesis
CR541_RS02765	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS02765	PWY-7003	glycerol degradation to butanol
CR541_RS02765	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CR541_RS02765	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CR541_RS02790	PWY-6749	CMP-legionaminate biosynthesis I
CR541_RS02825	PWY-3341	L-proline biosynthesis III
CR541_RS02825	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CR541_RS02830	PWY-3341	L-proline biosynthesis III
CR541_RS02830	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CR541_RS02835	PWY-3341	L-proline biosynthesis III
CR541_RS02835	PWY-4981	L-proline biosynthesis II (from arginine)
CR541_RS02835	PWY-6344	L-ornithine degradation II (Stickland reaction)
CR541_RS02930	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CR541_RS02945	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CR541_RS02945	PWY-6749	CMP-legionaminate biosynthesis I
CR541_RS02945	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CR541_RS02945	PWY-7102	bisabolene biosynthesis
CR541_RS02945	PWY-7131	CMP-legionaminate biosynthesis II
CR541_RS02945	PWY-7721	CR541_RS02945
CR541_RS02945	PWY-7736	CR541_RS02945
CR541_RS02960	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CR541_RS03020	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS03020	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS03030	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CR541_RS03035	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CR541_RS03040	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CR541_RS03150	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CR541_RS03150	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CR541_RS03725	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CR541_RS03725	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CR541_RS03725	PWY-7622	UDP-galactofuranose biosynthesis
CR541_RS03810	PWY-4981	L-proline biosynthesis II (from arginine)
CR541_RS03820	PWY-4981	L-proline biosynthesis II (from arginine)
CR541_RS03820	PWY-4984	urea cycle
CR541_RS03820	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS03840	PWY-6902	chitin degradation II
CR541_RS03840	PWY-7822	CR541_RS03840
CR541_RS03850	PWY-6700	queuosine biosynthesis
CR541_RS03855	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CR541_RS03855	PWY-6855	chitin degradation I (archaea)
CR541_RS03855	PWY-6906	chitin derivatives degradation
CR541_RS03905	PWY-4061	glutathione-mediated detoxification I
CR541_RS03905	PWY-6842	glutathione-mediated detoxification II
CR541_RS03905	PWY-7112	4-hydroxy-2-nonenal detoxification
CR541_RS03905	PWY-7533	gliotoxin biosynthesis
CR541_RS03980	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CR541_RS03980	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS03980	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS03980	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CR541_RS03980	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CR541_RS03980	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS03995	PWY-2201	folate transformations I
CR541_RS04110	PWY-6749	CMP-legionaminate biosynthesis I
CR541_RS04120	PWY-7851	CR541_RS04120
CR541_RS04130	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CR541_RS04130	PWY-2161	folate polyglutamylation
CR541_RS04130	PWY-2201	folate transformations I
CR541_RS04130	PWY-3841	folate transformations II
CR541_RS04220	PWY-5480	pyruvate fermentation to ethanol I
CR541_RS04220	PWY-5485	pyruvate fermentation to acetate IV
CR541_RS04220	PWY-5493	reductive monocarboxylic acid cycle
CR541_RS04225	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS04225	PWY-5723	Rubisco shunt
CR541_RS04240	PWY-2941	L-lysine biosynthesis II
CR541_RS04240	PWY-2942	L-lysine biosynthesis III
CR541_RS04240	PWY-5097	L-lysine biosynthesis VI
CR541_RS04240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CR541_RS04240	PWY-6559	spermidine biosynthesis II
CR541_RS04240	PWY-6562	norspermidine biosynthesis
CR541_RS04240	PWY-7153	grixazone biosynthesis
CR541_RS04240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS04245	PWY-2941	L-lysine biosynthesis II
CR541_RS04245	PWY-2942	L-lysine biosynthesis III
CR541_RS04245	PWY-5097	L-lysine biosynthesis VI
CR541_RS04260	PWY-4261	glycerol degradation I
CR541_RS04265	PWY-4261	glycerol degradation I
CR541_RS04265	PWY-6118	glycerol-3-phosphate shuttle
CR541_RS04265	PWY-6952	glycerophosphodiester degradation
CR541_RS04310	PWY-6910	hydroxymethylpyrimidine salvage
CR541_RS04310	PWY-7356	thiamin salvage IV (yeast)
CR541_RS04310	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CR541_RS04315	PWY-6897	thiamin salvage II
CR541_RS04315	PWY-7356	thiamin salvage IV (yeast)
CR541_RS04315	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CR541_RS04320	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CR541_RS04320	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CR541_RS04320	PWY-6897	thiamin salvage II
CR541_RS04320	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CR541_RS04320	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CR541_RS04320	PWY-7356	thiamin salvage IV (yeast)
CR541_RS04320	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CR541_RS04330	PWY-4202	arsenate detoxification I (glutaredoxin)
CR541_RS04330	PWY-5532	adenosine nucleotides degradation IV
CR541_RS04330	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CR541_RS04330	PWY-6608	guanosine nucleotides degradation III
CR541_RS04330	PWY-6609	adenine and adenosine salvage III
CR541_RS04330	PWY-6611	adenine and adenosine salvage V
CR541_RS04330	PWY-6620	guanine and guanosine salvage
CR541_RS04330	PWY-6627	salinosporamide A biosynthesis
CR541_RS04330	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CR541_RS04330	PWY-7179	purine deoxyribonucleosides degradation I
CR541_RS04330	PWY-7179-1	purine deoxyribonucleosides degradation
CR541_RS04465	PWY-5057	L-valine degradation II
CR541_RS04465	PWY-5076	L-leucine degradation III
CR541_RS04465	PWY-5078	L-isoleucine degradation II
CR541_RS04465	PWY-5101	L-isoleucine biosynthesis II
CR541_RS04465	PWY-5103	L-isoleucine biosynthesis III
CR541_RS04465	PWY-5104	L-isoleucine biosynthesis IV
CR541_RS04465	PWY-5108	L-isoleucine biosynthesis V
CR541_RS04465	PWY-7767	CR541_RS04465
CR541_RS04510	PWY-6823	molybdenum cofactor biosynthesis
CR541_RS04510	PWY-6891	thiazole biosynthesis II (Bacillus)
CR541_RS04510	PWY-6892	thiazole biosynthesis I (E. coli)
CR541_RS04510	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CR541_RS04565	PWY-7183	pyrimidine nucleobases salvage I
CR541_RS04570	PWY-5686	UMP biosynthesis
CR541_RS04570	PWY-7790	CR541_RS04570
CR541_RS04570	PWY-7791	CR541_RS04570
CR541_RS04575	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CR541_RS04575	PWY-5686	UMP biosynthesis
CR541_RS04575	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS04575	PWY-7790	CR541_RS04575
CR541_RS04575	PWY-7791	CR541_RS04575
CR541_RS04580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CR541_RS04580	PWY-5686	UMP biosynthesis
CR541_RS04580	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS04580	PWY-7790	CR541_RS04580
CR541_RS04580	PWY-7791	CR541_RS04580
CR541_RS04630	PWY-702	L-methionine biosynthesis II
CR541_RS04635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS04635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS04700	PWY-6829	tRNA methylation (yeast)
CR541_RS04700	PWY-7285	methylwyosine biosynthesis
CR541_RS04700	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CR541_RS04720	PWY-6619	adenine and adenosine salvage VI
CR541_RS04735	PWY-2941	L-lysine biosynthesis II
CR541_RS04735	PWY-2942	L-lysine biosynthesis III
CR541_RS04735	PWY-5097	L-lysine biosynthesis VI
CR541_RS04755	PWY-2722	trehalose degradation IV
CR541_RS04755	PWY-2723	trehalose degradation V
CR541_RS04755	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CR541_RS04755	PWY-5661	GDP-glucose biosynthesis
CR541_RS04755	PWY-621	sucrose degradation III (sucrose invertase)
CR541_RS04755	PWY-7238	sucrose biosynthesis II
CR541_RS04755	PWY-7385	1,3-propanediol biosynthesis (engineered)
CR541_RS04770	PWY-3841	folate transformations II
CR541_RS04770	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS04770	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS04770	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CR541_RS04770	PWY-7199	pyrimidine deoxyribonucleosides salvage
CR541_RS04770	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS04775	PWY-3841	folate transformations II
CR541_RS04775	PWY-6614	tetrahydrofolate biosynthesis
CR541_RS04795	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CR541_RS04795	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CR541_RS04795	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS04795	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS04795	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CR541_RS04795	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CR541_RS04795	PWY-7205	CMP phosphorylation
CR541_RS04795	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS04795	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS04795	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS04795	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS04795	PWY-7224	purine deoxyribonucleosides salvage
CR541_RS04795	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS04795	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CR541_RS04825	PWY-7199	pyrimidine deoxyribonucleosides salvage
CR541_RS04850	PWY-1622	formaldehyde assimilation I (serine pathway)
CR541_RS04850	PWY-181	photorespiration
CR541_RS04850	PWY-2161	folate polyglutamylation
CR541_RS04850	PWY-2201	folate transformations I
CR541_RS04850	PWY-3661	glycine betaine degradation I
CR541_RS04850	PWY-3661-1	glycine betaine degradation II (mammalian)
CR541_RS04850	PWY-3841	folate transformations II
CR541_RS04850	PWY-5497	purine nucleobases degradation II (anaerobic)
CR541_RS04900	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS04955	PWY-6749	CMP-legionaminate biosynthesis I
CR541_RS05130	PWY-5686	UMP biosynthesis
CR541_RS05130	PWY-7790	CR541_RS05130
CR541_RS05130	PWY-7791	CR541_RS05130
CR541_RS05145	PWY-5686	UMP biosynthesis
CR541_RS05145	PWY-7790	CR541_RS05145
CR541_RS05145	PWY-7791	CR541_RS05145
CR541_RS05150	PWY-7805	CR541_RS05150
CR541_RS05150	PWY-7807	CR541_RS05150
CR541_RS05155	PWY-5686	UMP biosynthesis
CR541_RS05155	PWY-7790	CR541_RS05155
CR541_RS05155	PWY-7791	CR541_RS05155
CR541_RS05175	PWY-622	starch biosynthesis
CR541_RS05185	PWY-622	starch biosynthesis
CR541_RS05190	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CR541_RS05190	PWY-622	starch biosynthesis
CR541_RS05280	PWY-6619	adenine and adenosine salvage VI
CR541_RS05295	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CR541_RS05295	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CR541_RS05375	PWY-1281	sulfoacetaldehyde degradation I
CR541_RS05375	PWY-5482	pyruvate fermentation to acetate II
CR541_RS05375	PWY-5485	pyruvate fermentation to acetate IV
CR541_RS05375	PWY-5497	purine nucleobases degradation II (anaerobic)
CR541_RS05375	PWY-6637	sulfolactate degradation II
CR541_RS05385	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CR541_RS05385	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CR541_RS05385	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CR541_RS05405	PWY-6823	molybdenum cofactor biosynthesis
CR541_RS05405	PWY-6891	thiazole biosynthesis II (Bacillus)
CR541_RS05405	PWY-6892	thiazole biosynthesis I (E. coli)
CR541_RS05405	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CR541_RS05445	PWY-5481	pyruvate fermentation to lactate
CR541_RS05445	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS05475	PWY-6556	pyrimidine ribonucleosides salvage II
CR541_RS05475	PWY-7181	pyrimidine deoxyribonucleosides degradation
CR541_RS05475	PWY-7193	pyrimidine ribonucleosides salvage I
CR541_RS05475	PWY-7199	pyrimidine deoxyribonucleosides salvage
CR541_RS05480	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CR541_RS05485	PWY-7181	pyrimidine deoxyribonucleosides degradation
CR541_RS05495	PWY-3961	phosphopantothenate biosynthesis II
CR541_RS05575	PWY-6825	phosphatidylcholine biosynthesis V
CR541_RS05600	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CR541_RS05600	PWY-6167	flavin biosynthesis II (archaea)
CR541_RS05600	PWY-6168	flavin biosynthesis III (fungi)
CR541_RS05600	PWY-7863	CR541_RS05600
CR541_RS05735	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CR541_RS05735	PWY-6148	tetrahydromethanopterin biosynthesis
CR541_RS05735	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CR541_RS05735	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CR541_RS05735	PWY-7852	CR541_RS05735
CR541_RS05735	PWY-7853	CR541_RS05735
CR541_RS05740	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CR541_RS05740	PWY-6148	tetrahydromethanopterin biosynthesis
CR541_RS05740	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CR541_RS05740	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CR541_RS05745	PWY-6614	tetrahydrofolate biosynthesis
CR541_RS05750	PWY-5663	tetrahydrobiopterin biosynthesis I
CR541_RS05750	PWY-5664	tetrahydrobiopterin biosynthesis II
CR541_RS05750	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CR541_RS05750	PWY-6703	preQ<sub>0</sub> biosynthesis
CR541_RS05750	PWY-6983	tetrahydrobiopterin biosynthesis III
CR541_RS05750	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CR541_RS05750	PWY-7852	CR541_RS05750
CR541_RS05755	PWY-6502	oxidized GTP and dGTP detoxification
CR541_RS05815	PWY-7242	D-fructuronate degradation
CR541_RS05820	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
CR541_RS05820	PWY-7248	pectin degradation III
CR541_RS05825	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CR541_RS05825	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CR541_RS05825	PWY-7242	D-fructuronate degradation
CR541_RS05825	PWY-7310	D-glucosaminate degradation
CR541_RS05825	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CR541_RS05835	PWY-6807	xyloglucan degradation II (exoglucanase)
CR541_RS05860	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS05860	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS05875	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS05885	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS05930	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CR541_RS06005	PWY-5913	TCA cycle VI (obligate autotrophs)
CR541_RS06005	PWY-6549	L-glutamine biosynthesis III
CR541_RS06005	PWY-6728	methylaspartate cycle
CR541_RS06005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CR541_RS06005	PWY-7124	ethylene biosynthesis V (engineered)
CR541_RS06005	PWY-7254	TCA cycle VII (acetate-producers)
CR541_RS06005	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CR541_RS06025	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CR541_RS06025	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS06025	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CR541_RS06025	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS06025	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS06025	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS06025	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS06025	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CR541_RS06035	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CR541_RS06035	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS06035	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CR541_RS06035	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS06035	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS06035	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CR541_RS06035	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CR541_RS06035	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CR541_RS06100	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CR541_RS06100	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CR541_RS06100	PWY-7242	D-fructuronate degradation
CR541_RS06100	PWY-7310	D-glucosaminate degradation
CR541_RS06100	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
CR541_RS06235	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CR541_RS06235	PWY-6164	3-dehydroquinate biosynthesis I
CR541_RS06235	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CR541_RS06240	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CR541_RS06240	PWY-6164	3-dehydroquinate biosynthesis I
CR541_RS06240	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CR541_RS06245	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CR541_RS06250	PWY-6164	3-dehydroquinate biosynthesis I
CR541_RS06285	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CR541_RS06285	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CR541_RS06290	PWY-6906	chitin derivatives degradation
CR541_RS06290	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CR541_RS06290	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CR541_RS06300	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CR541_RS06305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CR541_RS06310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CR541_RS06310	PWY-6416	quinate degradation II
CR541_RS06310	PWY-6707	gallate biosynthesis
CR541_RS06345	PWY-7205	CMP phosphorylation
CR541_RS06460	PWY-3221	dTDP-L-rhamnose biosynthesis II
CR541_RS06460	PWY-6808	dTDP-D-forosamine biosynthesis
CR541_RS06460	PWY-6942	dTDP-D-desosamine biosynthesis
CR541_RS06460	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CR541_RS06460	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CR541_RS06460	PWY-6974	dTDP-L-olivose biosynthesis
CR541_RS06460	PWY-6976	dTDP-L-mycarose biosynthesis
CR541_RS06460	PWY-7104	dTDP-L-megosamine biosynthesis
CR541_RS06460	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CR541_RS06460	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CR541_RS06460	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CR541_RS06460	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CR541_RS06460	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CR541_RS06460	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CR541_RS06460	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CR541_RS06460	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CR541_RS06460	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CR541_RS06460	PWY-7688	CR541_RS06460
CR541_RS06460	PWY-7814	CR541_RS06460
CR541_RS06475	PWY-3221	dTDP-L-rhamnose biosynthesis II
CR541_RS06475	PWY-6808	dTDP-D-forosamine biosynthesis
CR541_RS06475	PWY-6942	dTDP-D-desosamine biosynthesis
CR541_RS06475	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CR541_RS06475	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CR541_RS06475	PWY-6974	dTDP-L-olivose biosynthesis
CR541_RS06475	PWY-6976	dTDP-L-mycarose biosynthesis
CR541_RS06475	PWY-7104	dTDP-L-megosamine biosynthesis
CR541_RS06475	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CR541_RS06475	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CR541_RS06475	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CR541_RS06475	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CR541_RS06475	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CR541_RS06475	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CR541_RS06475	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CR541_RS06475	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CR541_RS06475	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
CR541_RS06475	PWY-7688	CR541_RS06475
CR541_RS06475	PWY-7814	CR541_RS06475
CR541_RS06505	PWY-6605	adenine and adenosine salvage II
CR541_RS06505	PWY-6610	adenine and adenosine salvage IV
CR541_RS06505	PWY-7805	CR541_RS06505
CR541_RS06505	PWY-7807	CR541_RS06505
CR541_RS06525	PWY-7805	CR541_RS06525
CR541_RS06525	PWY-7807	CR541_RS06525
CR541_RS06560	PWY-2781	<i>cis</i>-zeatin biosynthesis
CR541_RS06575	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CR541_RS06575	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CR541_RS06575	PWY-6936	seleno-amino acid biosynthesis
CR541_RS06575	PWY-702	L-methionine biosynthesis II
CR541_RS06595	PWY-6654	phosphopantothenate biosynthesis III
CR541_RS06595	PWY-7862	CR541_RS06595
CR541_RS06720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS06720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS06730	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS06730	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS06870	PWY-4261	glycerol degradation I
CR541_RS06900	PWY-6700	queuosine biosynthesis
CR541_RS07005	PWY-7851	CR541_RS07005
CR541_RS07020	PWY-7039	phosphatidate metabolism, as a signaling molecule
CR541_RS07020	PWY-7817	CR541_RS07020
CR541_RS07105	PWY-6700	queuosine biosynthesis
CR541_RS07190	PWY-3821	galactose degradation III
CR541_RS07190	PWY-6317	galactose degradation I (Leloir pathway)
CR541_RS07190	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CR541_RS07190	PWY-6527	stachyose degradation
CR541_RS07190	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CR541_RS07190	PWY-7344	UDP-D-galactose biosynthesis
CR541_RS07230	PWY-5941	glycogen degradation II (eukaryotic)
CR541_RS07230	PWY-6731	starch degradation III
CR541_RS07230	PWY-6737	starch degradation V
CR541_RS07230	PWY-7238	sucrose biosynthesis II
CR541_RS07235	PWY-4202	arsenate detoxification I (glutaredoxin)
CR541_RS07235	PWY-5532	adenosine nucleotides degradation IV
CR541_RS07235	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CR541_RS07235	PWY-6608	guanosine nucleotides degradation III
CR541_RS07235	PWY-6609	adenine and adenosine salvage III
CR541_RS07235	PWY-6611	adenine and adenosine salvage V
CR541_RS07235	PWY-6620	guanine and guanosine salvage
CR541_RS07235	PWY-6627	salinosporamide A biosynthesis
CR541_RS07235	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CR541_RS07235	PWY-7179	purine deoxyribonucleosides degradation I
CR541_RS07235	PWY-7179-1	purine deoxyribonucleosides degradation
CR541_RS07240	PWY-4202	arsenate detoxification I (glutaredoxin)
CR541_RS07240	PWY-5532	adenosine nucleotides degradation IV
CR541_RS07240	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CR541_RS07240	PWY-6608	guanosine nucleotides degradation III
CR541_RS07240	PWY-6609	adenine and adenosine salvage III
CR541_RS07240	PWY-6611	adenine and adenosine salvage V
CR541_RS07240	PWY-6620	guanine and guanosine salvage
CR541_RS07240	PWY-6627	salinosporamide A biosynthesis
CR541_RS07240	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CR541_RS07240	PWY-7179	purine deoxyribonucleosides degradation I
CR541_RS07240	PWY-7179-1	purine deoxyribonucleosides degradation
CR541_RS07250	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CR541_RS07255	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS07255	PWY-5723	Rubisco shunt
CR541_RS07355	PWY-6749	CMP-legionaminate biosynthesis I
CR541_RS07475	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CR541_RS07515	PWY-1042	glycolysis IV (plant cytosol)
CR541_RS07515	PWY-1622	formaldehyde assimilation I (serine pathway)
CR541_RS07515	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CR541_RS07515	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS07515	PWY-5723	Rubisco shunt
CR541_RS07515	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS07515	PWY-6886	1-butanol autotrophic biosynthesis
CR541_RS07515	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS07515	PWY-7003	glycerol degradation to butanol
CR541_RS07515	PWY-7124	ethylene biosynthesis V (engineered)
CR541_RS07515	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CR541_RS07670	PWY-7805	CR541_RS07670
CR541_RS07670	PWY-7807	CR541_RS07670
CR541_RS07685	PWY-3461	L-tyrosine biosynthesis II
CR541_RS07685	PWY-3462	L-phenylalanine biosynthesis II
CR541_RS07685	PWY-6120	L-tyrosine biosynthesis III
CR541_RS07685	PWY-6627	salinosporamide A biosynthesis
CR541_RS07685	PWY-7626	bacilysin biosynthesis
CR541_RS07705	PWY-6854	ethylene biosynthesis III (microbes)
CR541_RS07760	PWY-7183	pyrimidine nucleobases salvage I
CR541_RS07770	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CR541_RS07790	PWY-6527	stachyose degradation
CR541_RS07800	PWY-6936	seleno-amino acid biosynthesis
CR541_RS07900	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CR541_RS07900	PWY-6153	autoinducer AI-2 biosynthesis I
CR541_RS07900	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CR541_RS07915	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CR541_RS07915	PWY-5667	CDP-diacylglycerol biosynthesis I
CR541_RS07915	PWY-6453	stigma estolide biosynthesis
CR541_RS07915	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CR541_RS07915	PWY-7587	oleate biosynthesis III (cyanobacteria)
CR541_RS08035	PWY-3861	mannitol degradation II
CR541_RS08035	PWY-3881	mannitol biosynthesis
CR541_RS08035	PWY-5659	GDP-mannose biosynthesis
CR541_RS08035	PWY-6992	1,5-anhydrofructose degradation
CR541_RS08035	PWY-7456	mannan degradation
CR541_RS08035	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
CR541_RS08035	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CR541_RS08090	PWY-7799	CR541_RS08090
CR541_RS08090	PWY-7800	CR541_RS08090
CR541_RS08100	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS08100	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS08110	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CR541_RS08110	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CR541_RS08115	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CR541_RS08160	PWY-7193	pyrimidine ribonucleosides salvage I
CR541_RS08195	PWY-1622	formaldehyde assimilation I (serine pathway)
CR541_RS08195	PWY-5484	glycolysis II (from fructose 6-phosphate)
CR541_RS08205	PWY-6174	mevalonate pathway II (archaea)
CR541_RS08205	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS08205	PWY-7524	mevalonate pathway III (archaea)
CR541_RS08205	PWY-7571	ferrichrome A biosynthesis
CR541_RS08205	PWY-922	mevalonate pathway I
CR541_RS08210	PWY-6174	mevalonate pathway II (archaea)
CR541_RS08210	PWY-7391	isoprene biosynthesis II (engineered)
CR541_RS08210	PWY-7524	mevalonate pathway III (archaea)
CR541_RS08210	PWY-922	mevalonate pathway I
CR541_RS08325	PWY-7805	CR541_RS08325
CR541_RS08325	PWY-7807	CR541_RS08325
CR541_RS08360	PWY-5381	pyridine nucleotide cycling (plants)
CR541_RS08375	PWY-2201	folate transformations I
CR541_RS08390	PWY-7851	CR541_RS08390
CR541_RS08470	PWY-6004	glycine betaine biosynthesis V (from glycine)
CR541_RS08520	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS08520	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS08530	PWY-2941	L-lysine biosynthesis II
CR541_RS08530	PWY-2942	L-lysine biosynthesis III
CR541_RS08530	PWY-5097	L-lysine biosynthesis VI
CR541_RS08580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CR541_RS08580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CR541_RS08675	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CR541_RS08675	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CR541_RS08675	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CR541_RS08690	PWY-2201	folate transformations I
CR541_RS08840	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CR541_RS08840	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CR541_RS08840	PWY-6936	seleno-amino acid biosynthesis
CR541_RS08840	PWY-702	L-methionine biosynthesis II
CR541_RS08845	PWY-2201	folate transformations I
CR541_RS08845	PWY-3841	folate transformations II
CR541_RS08880	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CR541_RS08930	PWY-6679	jadomycin biosynthesis
CR541_RS08930	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CR541_RS08935	PWY-6679	jadomycin biosynthesis
CR541_RS08935	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CR541_RS08945	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CR541_RS08945	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CR541_RS08945	PWY-5989	stearate biosynthesis II (bacteria and plants)
CR541_RS08945	PWY-5994	palmitate biosynthesis I (animals and fungi)
CR541_RS08945	PWY-6113	superpathway of mycolate biosynthesis
CR541_RS08945	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CR541_RS08945	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CR541_RS08945	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CR541_RS08945	PWY-7663	gondoate biosynthesis (anaerobic)
CR541_RS08945	PWY-7664	oleate biosynthesis IV (anaerobic)
CR541_RS08945	PWY-7858	CR541_RS08945
CR541_RS08945	PWYG-321	mycolate biosynthesis
CR541_RS08960	PWY-5367	petroselinate biosynthesis
CR541_RS08960	PWY-5515	L-arabinose degradation II
CR541_RS08960	PWY-5525	D-glucuronate degradation I
CR541_RS08960	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CR541_RS08960	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CR541_RS08960	PWY-5989	stearate biosynthesis II (bacteria and plants)
CR541_RS08960	PWY-5994	palmitate biosynthesis I (animals and fungi)
CR541_RS08960	PWY-6113	superpathway of mycolate biosynthesis
CR541_RS08960	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CR541_RS08960	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CR541_RS08960	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CR541_RS08960	PWY-7663	gondoate biosynthesis (anaerobic)
CR541_RS08960	PWY-7664	oleate biosynthesis IV (anaerobic)
CR541_RS08960	PWY-7858	CR541_RS08960
CR541_RS08960	PWYG-321	mycolate biosynthesis
CR541_RS08965	PWY-4381	fatty acid biosynthesis initiation I
CR541_RS08965	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CR541_RS08965	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CR541_RS08970	PWY-723	alkylnitronates degradation
CR541_RS08980	PWY-4381	fatty acid biosynthesis initiation I
CR541_RS09000	PWY-2941	L-lysine biosynthesis II
CR541_RS09000	PWY-2942	L-lysine biosynthesis III
CR541_RS09000	PWY-5097	L-lysine biosynthesis VI
CR541_RS09000	PWY-6559	spermidine biosynthesis II
CR541_RS09000	PWY-6562	norspermidine biosynthesis
CR541_RS09000	PWY-7153	grixazone biosynthesis
CR541_RS09015	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CR541_RS09020	PWY-6012	acyl carrier protein metabolism I
CR541_RS09020	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CR541_RS09120	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CR541_RS09120	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CR541_RS09275	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CR541_RS09275	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CR541_RS09290	PWY-6823	molybdenum cofactor biosynthesis
CR541_RS09290	PWY-6891	thiazole biosynthesis II (Bacillus)
CR541_RS09290	PWY-6892	thiazole biosynthesis I (E. coli)
CR541_RS09290	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CR541_RS09305	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CR541_RS09305	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CR541_RS09305	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CR541_RS09315	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CR541_RS09345	PWY-5103	L-isoleucine biosynthesis III
CR541_RS09345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CR541_RS09350	PWY-5101	L-isoleucine biosynthesis II
CR541_RS09350	PWY-5103	L-isoleucine biosynthesis III
CR541_RS09350	PWY-5104	L-isoleucine biosynthesis IV
CR541_RS09350	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CR541_RS09350	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CR541_RS09350	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CR541_RS09350	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CR541_RS09355	PWY-5101	L-isoleucine biosynthesis II
CR541_RS09355	PWY-5103	L-isoleucine biosynthesis III
CR541_RS09355	PWY-5104	L-isoleucine biosynthesis IV
CR541_RS09355	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CR541_RS09355	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CR541_RS09355	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CR541_RS09355	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CR541_RS09375	PWY-5101	L-isoleucine biosynthesis II
CR541_RS09375	PWY-5103	L-isoleucine biosynthesis III
CR541_RS09375	PWY-5104	L-isoleucine biosynthesis IV
CR541_RS09375	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CR541_RS09545	PWY-6936	seleno-amino acid biosynthesis
CR541_RS09545	PWY-7274	D-cycloserine biosynthesis
CR541_RS09650	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CR541_RS09655	PWY-6871	3-methylbutanol biosynthesis
CR541_RS09730	PWY-5667	CDP-diacylglycerol biosynthesis I
CR541_RS09730	PWY-5981	CDP-diacylglycerol biosynthesis III
CR541_RS09730	PWY-7817	CR541_RS09730
CR541_RS09745	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS09750	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CR541_RS09750	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CR541_RS09750	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CR541_RS09750	PWY-6840	homoglutathione biosynthesis
CR541_RS09750	PWY-7255	ergothioneine biosynthesis I (bacteria)
CR541_RS09850	PWY-101	photosynthesis light reactions
CR541_RS09880	PWY-6898	thiamin salvage III
CR541_RS09880	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CR541_RS09880	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CR541_RS09880	PWY-7356	thiamin salvage IV (yeast)
CR541_RS09885	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS09885	PWY-5723	Rubisco shunt
CR541_RS10000	PWY-4983	L-citrulline-nitric oxide cycle
CR541_RS10000	PWY-4984	urea cycle
CR541_RS10000	PWY-5	canavanine biosynthesis
CR541_RS10000	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CR541_RS10000	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS10005	PWY-4983	L-citrulline-nitric oxide cycle
CR541_RS10005	PWY-4984	urea cycle
CR541_RS10005	PWY-5	canavanine biosynthesis
CR541_RS10005	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CR541_RS10005	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CR541_RS10040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CR541_RS10065	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CR541_RS10065	PWY-5743	3-hydroxypropanoate cycle
CR541_RS10065	PWY-5744	glyoxylate assimilation
CR541_RS10065	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CR541_RS10065	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS10065	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CR541_RS10065	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CR541_RS10100	PWY-5667	CDP-diacylglycerol biosynthesis I
CR541_RS10100	PWY-5981	CDP-diacylglycerol biosynthesis III
CR541_RS10105	PWY-3801	sucrose degradation II (sucrose synthase)
CR541_RS10105	PWY-6527	stachyose degradation
CR541_RS10105	PWY-7238	sucrose biosynthesis II
CR541_RS10105	PWY-7343	UDP-glucose biosynthesis
CR541_RS10105	PWY-7817	CR541_RS10105
CR541_RS10120	PWY-2941	L-lysine biosynthesis II
CR541_RS10125	PWY-2941	L-lysine biosynthesis II
CR541_RS10145	PWY-3801	sucrose degradation II (sucrose synthase)
CR541_RS10145	PWY-5054	sorbitol biosynthesis I
CR541_RS10145	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CR541_RS10145	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CR541_RS10145	PWY-5659	GDP-mannose biosynthesis
CR541_RS10145	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CR541_RS10145	PWY-621	sucrose degradation III (sucrose invertase)
CR541_RS10145	PWY-622	starch biosynthesis
CR541_RS10145	PWY-6981	chitin biosynthesis
CR541_RS10145	PWY-6992	1,5-anhydrofructose degradation
CR541_RS10145	PWY-7238	sucrose biosynthesis II
CR541_RS10145	PWY-7347	sucrose biosynthesis III
CR541_RS10145	PWY-7385	1,3-propanediol biosynthesis (engineered)
CR541_RS10165	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CR541_RS10165	PWY-5723	Rubisco shunt
CR541_RS10165	PWY-6891	thiazole biosynthesis II (Bacillus)
CR541_RS10165	PWY-6892	thiazole biosynthesis I (E. coli)
CR541_RS10165	PWY-6901	superpathway of glucose and xylose degradation
CR541_RS10165	PWY-7560	methylerythritol phosphate pathway II
CR541_RS10190	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
CR541_RS10195	PWY-5686	UMP biosynthesis
CR541_RS10195	PWY-7790	CR541_RS10195
CR541_RS10195	PWY-7791	CR541_RS10195
CR541_RS10425	PWY-2201	folate transformations I
CR541_RS10545	PWY-5941	glycogen degradation II (eukaryotic)
CR541_RS10545	PWY-6724	starch degradation II
CR541_RS10545	PWY-6737	starch degradation V
CR541_RS10545	PWY-7238	sucrose biosynthesis II
CR541_RS10675	PWY-7805	CR541_RS10675
CR541_RS10675	PWY-7807	CR541_RS10675
CR541_RS10745	PWY-5269	cardiolipin biosynthesis II
CR541_RS10745	PWY-5668	cardiolipin biosynthesis I
CR541_RS10745	PWY-7817	CR541_RS10745
CR541_RS10775	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CR541_RS10775	PWY-6596	adenosine nucleotides degradation I
CR541_RS10775	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CR541_RS10820	PWY-6825	phosphatidylcholine biosynthesis V
