locus-tag class description SSUD12_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SSUD12_RS00005 PF00308 Bacterial dnaA protein SSUD12_RS00010 PF02767 DNA polymerase III beta subunit, central domain SSUD12_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SSUD12_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SSUD12_RS00025 PF01381 Helix-turn-helix SSUD12_RS00030 PF06071 Protein of unknown function (DUF933) SSUD12_RS00030 PF01926 50S ribosome-binding GTPase SSUD12_RS00035 PF01195 Peptidyl-tRNA hydrolase SSUD12_RS00040 PF02559 CarD-like/TRCF domain SSUD12_RS00040 PF17757 UvrB interaction domain SSUD12_RS00040 PF03461 TRCF domain SSUD12_RS00040 PF00271 Helicase conserved C-terminal domain SSUD12_RS00040 PF00270 DEAD/DEAH box helicase SSUD12_RS00045 PF01479 S4 domain SSUD12_RS00065 PF01171 PP-loop family SSUD12_RS00070 PF00156 Phosphoribosyl transferase domain SSUD12_RS00185 PF04085 rod shape-determining protein MreC SSUD12_RS00200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSUD12_RS00200 PF14572 Phosphoribosyl synthetase-associated domain SSUD12_RS00205 PF00155 Aminotransferase class I and II SSUD12_RS00210 PF02565 Recombination protein O C terminal SSUD12_RS00210 PF11967 Recombination protein O N terminal SSUD12_RS00215 PF02504 Fatty acid synthesis protein SSUD12_RS00220 PF00550 Phosphopantetheine attachment site SSUD12_RS00225 PF01259 SAICAR synthetase SSUD12_RS00235 PF00156 Phosphoribosyl transferase domain SSUD12_RS00235 PF13537 Glutamine amidotransferase domain SSUD12_RS00245 PF00551 Formyl transferase SSUD12_RS00255 PF01808 AICARFT/IMPCHase bienzyme SSUD12_RS00255 PF02142 MGS-like domain SSUD12_RS00260 PF02086 D12 class N6 adenine-specific DNA methyltransferase SSUD12_RS00265 PF01555 DNA methylase SSUD12_RS00270 PF04556 DpnII restriction endonuclease SSUD12_RS00275 PF04556 DpnII restriction endonuclease SSUD12_RS00280 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSUD12_RS00280 PF02843 Phosphoribosylglycinamide synthetase, C domain SSUD12_RS00280 PF02844 Phosphoribosylglycinamide synthetase, N domain SSUD12_RS00285 PF00731 AIR carboxylase SSUD12_RS00290 PF02222 ATP-grasp domain SSUD12_RS00290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SSUD12_RS00305 PF10397 Adenylosuccinate lyase C-terminus SSUD12_RS00305 PF00206 Lyase SSUD12_RS00325 PF00005 ABC transporter SSUD12_RS00335 PF00664 ABC transporter transmembrane region SSUD12_RS00335 PF00005 ABC transporter SSUD12_RS00340 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSUD12_RS00340 PF05491 RuvB C-terminal winged helix domain SSUD12_RS00340 PF17864 RuvB AAA lid domain SSUD12_RS00350 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS00365 PF08245 Mur ligase middle domain SSUD12_RS00365 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS00380 PF01119 DNA mismatch repair protein, C-terminal domain SSUD12_RS00380 PF08676 MutL C terminal dimerisation domain SSUD12_RS00385 PF01330 RuvA N terminal domain SSUD12_RS00385 PF07499 RuvA, C-terminal domain SSUD12_RS00390 PF13302 Acetyltransferase (GNAT) domain SSUD12_RS00390 PF13673 Acetyltransferase (GNAT) domain SSUD12_RS00390 PF00117 Glutamine amidotransferase class-I SSUD12_RS00390 PF00958 GMP synthase C terminal domain SSUD12_RS00390 PF03352 Methyladenine glycosylase SSUD12_RS00395 PF00994 Probable molybdopterin binding domain SSUD12_RS00395 PF18146 Damage-inducible protein CinA KH domain SSUD12_RS00395 PF02464 Competence-damaged protein SSUD12_RS00400 PF00154 recA bacterial DNA recombination protein SSUD12_RS00415 PF03960 ArsC family SSUD12_RS00420 PF06135 IreB regulatory phosphoprotein SSUD12_RS00425 PF03652 Holliday junction resolvase SSUD12_RS00430 PF06949 Protein of unknown function (DUF1292) SSUD12_RS00435 PF00338 Ribosomal protein S10p/S20e SSUD12_RS00440 PF00297 Ribosomal protein L3 SSUD12_RS00445 PF00573 Ribosomal protein L4/L1 family SSUD12_RS00450 PF00276 Ribosomal protein L23 SSUD12_RS00455 PF03947 Ribosomal Proteins L2, C-terminal domain SSUD12_RS00455 PF00181 Ribosomal Proteins L2, RNA binding domain SSUD12_RS00460 PF00203 Ribosomal protein S19 SSUD12_RS00465 PF00237 Ribosomal protein L22p/L17e SSUD12_RS00470 PF00189 Ribosomal protein S3, C-terminal domain SSUD12_RS00470 PF07650 KH domain SSUD12_RS00475 PF00252 Ribosomal protein L16p/L10e SSUD12_RS00480 PF00831 Ribosomal L29 protein SSUD12_RS00485 PF00366 Ribosomal protein S17 SSUD12_RS00490 PF00238 Ribosomal protein L14p/L23e SSUD12_RS00495 PF00467 KOW motif SSUD12_RS00495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SSUD12_RS00500 PF00281 Ribosomal protein L5 SSUD12_RS00500 PF00673 ribosomal L5P family C-terminus SSUD12_RS00505 PF00253 Ribosomal protein S14p/S29e SSUD12_RS00510 PF00410 Ribosomal protein S8 SSUD12_RS00520 PF00347 Ribosomal protein L6 SSUD12_RS00525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SSUD12_RS00530 PF00333 Ribosomal protein S5, N-terminal domain SSUD12_RS00530 PF03719 Ribosomal protein S5, C-terminal domain SSUD12_RS00535 PF00327 Ribosomal protein L30p/L7e SSUD12_RS00540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SSUD12_RS00545 PF00344 SecY translocase SSUD12_RS00555 PF01176 Translation initiation factor 1A / IF-1 SSUD12_RS00560 PF00444 Ribosomal protein L36 SSUD12_RS00565 PF00416 Ribosomal protein S13/S18 SSUD12_RS00570 PF00411 Ribosomal protein S11 SSUD12_RS00575 PF01000 RNA polymerase Rpb3/RpoA insert domain SSUD12_RS00575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SSUD12_RS00575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SSUD12_RS00580 PF01196 Ribosomal protein L17 SSUD12_RS00675 PF13683 Integrase core domain SSUD12_RS00675 PF01610 Transposase SSUD12_RS00680 PF01047 MarR family SSUD12_RS00685 PF00005 ABC transporter SSUD12_RS00690 PF00950 ABC 3 transport family SSUD12_RS00695 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SSUD12_RS00695 PF01297 Zinc-uptake complex component A periplasmic SSUD12_RS00700 PF03965 Penicillinase repressor SSUD12_RS00730 PF00005 ABC transporter SSUD12_RS00740 PF00579 tRNA synthetases class I (W and Y) SSUD12_RS00740 PF01479 S4 domain SSUD12_RS00745 PF00905 Penicillin binding protein transpeptidase domain SSUD12_RS00745 PF00912 Transglycosylase SSUD12_RS00750 PF04563 RNA polymerase beta subunit SSUD12_RS00750 PF04560 RNA polymerase Rpb2, domain 7 SSUD12_RS00750 PF00562 RNA polymerase Rpb2, domain 6 SSUD12_RS00750 PF10385 RNA polymerase beta subunit external 1 domain SSUD12_RS00750 PF04565 RNA polymerase Rpb2, domain 3 SSUD12_RS00750 PF04561 RNA polymerase Rpb2, domain 2 SSUD12_RS00755 PF04997 RNA polymerase Rpb1, domain 1 SSUD12_RS00755 PF04998 RNA polymerase Rpb1, domain 5 SSUD12_RS00755 PF05000 RNA polymerase Rpb1, domain 4 SSUD12_RS00755 PF04983 RNA polymerase Rpb1, domain 3 SSUD12_RS00755 PF00623 RNA polymerase Rpb1, domain 2 SSUD12_RS00765 PF02016 LD-carboxypeptidase N-terminal domain SSUD12_RS00765 PF17676 LD-carboxypeptidase C-terminal domain SSUD12_RS00770 PF00437 Type II/IV secretion system protein SSUD12_RS00775 PF00482 Type II secretion system (T2SS), protein F SSUD12_RS00780 PF07963 Prokaryotic N-terminal methylation motif SSUD12_RS00810 PF00871 Acetokinase family SSUD12_RS00815 PF07155 ECF-type riboflavin transporter, S component SSUD12_RS00820 PF08245 Mur ligase middle domain SSUD12_RS00820 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS00825 PF05343 M42 glutamyl aminopeptidase SSUD12_RS00835 PF00085 Thioredoxin SSUD12_RS00845 PF01588 Putative tRNA binding domain SSUD12_RS00845 PF14794 Domain of unknown function (DUF4479) SSUD12_RS00855 PF00436 Single-strand binding protein family SSUD12_RS00865 PF00166 Chaperonin 10 Kd subunit SSUD12_RS00870 PF00118 TCP-1/cpn60 chaperonin family SSUD12_RS00875 PF00164 Ribosomal protein S12/S23 SSUD12_RS00880 PF00177 Ribosomal protein S7p/S5e SSUD12_RS00885 PF14492 Elongation Factor G, domain II SSUD12_RS00885 PF03144 Elongation factor Tu domain 2 SSUD12_RS00885 PF00679 Elongation factor G C-terminus SSUD12_RS00885 PF03764 Elongation factor G, domain IV SSUD12_RS00885 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS00905 PF01641 SelR domain SSUD12_RS00905 PF08534 Redoxin SSUD12_RS00905 PF01625 Peptide methionine sulfoxide reductase SSUD12_RS00910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSUD12_RS00910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SSUD12_RS00915 PF00162 Phosphoglycerate kinase SSUD12_RS00925 PF13411 MerR HTH family regulatory protein SSUD12_RS00930 PF00120 Glutamine synthetase, catalytic domain SSUD12_RS00930 PF03951 Glutamine synthetase, beta-Grasp domain SSUD12_RS00935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSUD12_RS00935 PF17770 Ribonuclease J C-terminal domain SSUD12_RS00935 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS00940 PF07288 Protein of unknown function (DUF1447) SSUD12_RS00955 PF00814 Glycoprotease family SSUD12_RS00960 PF12833 Helix-turn-helix domain SSUD12_RS00960 PF02311 AraC-like ligand binding domain SSUD12_RS00965 PF01547 Bacterial extracellular solute-binding protein SSUD12_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS00975 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS00980 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSUD12_RS00980 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSUD12_RS00995 PF03601 Conserved hypothetical protein 698 SSUD12_RS01005 PF13732 Domain of unknown function (DUF4162) SSUD12_RS01005 PF00005 ABC transporter SSUD12_RS01020 PF00232 Glycosyl hydrolase family 1 SSUD12_RS01025 PF08279 HTH domain SSUD12_RS01025 PF04394 Protein of unknown function, DUF536 SSUD12_RS01030 PF03009 Glycerophosphoryl diester phosphodiesterase family SSUD12_RS01035 PF02575 YbaB/EbfC DNA-binding family SSUD12_RS01040 PF01380 SIS domain SSUD12_RS01050 PF13683 Integrase core domain SSUD12_RS01050 PF01610 Transposase SSUD12_RS01055 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SSUD12_RS01055 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSUD12_RS01055 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSUD12_RS01065 PF00144 Beta-lactamase SSUD12_RS01075 PF05257 CHAP domain SSUD12_RS01075 PF01476 LysM domain SSUD12_RS01080 PF02901 Pyruvate formate lyase-like SSUD12_RS01080 PF01228 Glycine radical SSUD12_RS01085 PF00817 impB/mucB/samB family SSUD12_RS01085 PF11799 impB/mucB/samB family C-terminal domain SSUD12_RS01085 PF11798 IMS family HHH motif SSUD12_RS01095 PF13460 NAD(P)H-binding SSUD12_RS01100 PF00294 pfkB family carbohydrate kinase SSUD12_RS01110 PF14490 Helix-hairpin-helix containing domain SSUD12_RS01110 PF13538 UvrD-like helicase C-terminal domain SSUD12_RS01110 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SSUD12_RS01115 PF10502 Signal peptidase, peptidase S26 SSUD12_RS01120 PF11858 Domain of unknown function (DUF3378) SSUD12_RS01120 PF01351 Ribonuclease HII SSUD12_RS01125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SSUD12_RS01125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSUD12_RS01140 PF02378 Phosphotransferase system, EIIC SSUD12_RS01140 PF00367 phosphotransferase system, EIIB SSUD12_RS01155 PF07702 UTRA domain SSUD12_RS01155 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS01170 PF01713 Smr domain SSUD12_RS01170 PF00488 MutS domain V SSUD12_RS01215 PF00085 Thioredoxin SSUD12_RS01220 PF13193 AMP-binding enzyme C-terminal domain SSUD12_RS01220 PF00501 AMP-binding enzyme SSUD12_RS01225 PF01641 SelR domain SSUD12_RS01225 PF01625 Peptide methionine sulfoxide reductase SSUD12_RS01250 PF12704 MacB-like periplasmic core domain SSUD12_RS01250 PF02687 FtsX-like permease family SSUD12_RS01250 PF00005 ABC transporter SSUD12_RS01255 PF01235 Sodium:alanine symporter family SSUD12_RS01260 PF00924 Mechanosensitive ion channel SSUD12_RS01275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SSUD12_RS01275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSUD12_RS01285 PF01180 Dihydroorotate dehydrogenase SSUD12_RS01290 PF09587 Bacterial capsule synthesis protein PGA_cap SSUD12_RS01310 PF00005 ABC transporter SSUD12_RS01315 PF00440 Bacterial regulatory proteins, tetR family SSUD12_RS01345 PF05872 Bacterial protein of unknown function (DUF853) SSUD12_RS01350 PF00293 NUDIX domain SSUD12_RS01385 PF00471 Ribosomal protein L33 SSUD12_RS01390 PF01783 Ribosomal L32p protein family SSUD12_RS01395 PF13393 Histidyl-tRNA synthetase SSUD12_RS01395 PF03129 Anticodon binding domain SSUD12_RS01400 PF00107 Zinc-binding dehydrogenase SSUD12_RS01400 PF08240 Alcohol dehydrogenase GroES-like domain SSUD12_RS01405 PF00465 Iron-containing alcohol dehydrogenase SSUD12_RS01405 PF00171 Aldehyde dehydrogenase family SSUD12_RS01410 PF14821 Threonine synthase N terminus SSUD12_RS01410 PF00291 Pyridoxal-phosphate dependent enzyme SSUD12_RS01415 PF00664 ABC transporter transmembrane region SSUD12_RS01415 PF00005 ABC transporter SSUD12_RS01420 PF00664 ABC transporter transmembrane region SSUD12_RS01420 PF00005 ABC transporter SSUD12_RS01435 PF00005 ABC transporter SSUD12_RS01440 PF01554 MatE SSUD12_RS01445 PF00005 ABC transporter SSUD12_RS01445 PF00664 ABC transporter transmembrane region SSUD12_RS01455 PF08544 GHMP kinases C terminal SSUD12_RS01455 PF10509 Galactokinase galactose-binding signature SSUD12_RS01455 PF00288 GHMP kinases N terminal domain SSUD12_RS01465 PF00288 GHMP kinases N terminal domain SSUD12_RS01465 PF08544 GHMP kinases C terminal SSUD12_RS01470 PF01070 FMN-dependent dehydrogenase SSUD12_RS01475 PF00005 ABC transporter SSUD12_RS01475 PF00664 ABC transporter transmembrane region SSUD12_RS01480 PF00664 ABC transporter transmembrane region SSUD12_RS01480 PF00005 ABC transporter SSUD12_RS01490 PF05167 Uncharacterised ACR (DUF711) SSUD12_RS01495 PF00300 Histidine phosphatase superfamily (branch 1) SSUD12_RS01505 PF00005 ABC transporter SSUD12_RS01510 PF01381 Helix-turn-helix SSUD12_RS01520 PF03551 Transcriptional regulator PadR-like family SSUD12_RS01530 PF01628 HrcA protein C terminal domain SSUD12_RS01530 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SSUD12_RS01535 PF01025 GrpE SSUD12_RS01540 PF00012 Hsp70 protein SSUD12_RS01550 PF00684 DnaJ central domain SSUD12_RS01550 PF01556 DnaJ C terminal domain SSUD12_RS01550 PF00226 DnaJ domain SSUD12_RS01555 PF03099 Biotin/lipoate A/B protein ligase family SSUD12_RS01560 PF01425 Amidase SSUD12_RS01565 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS01570 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS01575 PF13443 Cro/C1-type HTH DNA-binding domain SSUD12_RS01590 PF01475 Ferric uptake regulator family SSUD12_RS01595 PF01416 tRNA pseudouridine synthase SSUD12_RS01610 PF04260 Protein of unknown function (DUF436) SSUD12_RS01640 PF12697 Alpha/beta hydrolase family SSUD12_RS01645 PF00106 short chain dehydrogenase SSUD12_RS01650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SSUD12_RS01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS01670 PF13460 NAD(P)H-binding SSUD12_RS01675 PF02082 Transcriptional regulator SSUD12_RS01680 PF00440 Bacterial regulatory proteins, tetR family SSUD12_RS01695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SSUD12_RS01695 PF05697 Bacterial trigger factor protein (TF) SSUD12_RS01695 PF05698 Bacterial trigger factor protein (TF) C-terminus SSUD12_RS01725 PF05066 HB1, ASXL, restriction endonuclease HTH domain SSUD12_RS01730 PF06418 CTP synthase N-terminus SSUD12_RS01730 PF00117 Glutamine amidotransferase class-I SSUD12_RS01740 PF01116 Fructose-bisphosphate aldolase class-II SSUD12_RS01745 PF00830 Ribosomal L28 family SSUD12_RS01785 PF17191 RecG wedge domain SSUD12_RS01785 PF00271 Helicase conserved C-terminal domain SSUD12_RS01785 PF00270 DEAD/DEAH box helicase SSUD12_RS01795 PF00710 Asparaginase, N-terminal SSUD12_RS01795 PF17763 Glutaminase/Asparaginase C-terminal domain SSUD12_RS01800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSUD12_RS01810 PF00582 Universal stress protein family SSUD12_RS01815 PF00155 Aminotransferase class I and II SSUD12_RS01820 PF08222 CodY helix-turn-helix domain SSUD12_RS01820 PF06018 CodY GAF-like domain SSUD12_RS01825 PF00857 Isochorismatase family SSUD12_RS01830 PF01245 Ribosomal protein L19 SSUD12_RS01845 PF02686 Glu-tRNAGln amidotransferase C subunit SSUD12_RS01850 PF01425 Amidase SSUD12_RS01855 PF02934 GatB/GatE catalytic domain SSUD12_RS01855 PF02637 GatB domain SSUD12_RS01860 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS01865 PF00288 GHMP kinases N terminal domain SSUD12_RS01865 PF08544 GHMP kinases C terminal SSUD12_RS01865 PF10509 Galactokinase galactose-binding signature SSUD12_RS01870 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SSUD12_RS01870 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SSUD12_RS01875 PF00892 EamA-like transporter family SSUD12_RS01880 PF03932 CutC family SSUD12_RS01890 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS01895 PF01926 50S ribosome-binding GTPase SSUD12_RS01900 PF01985 CRS1 / YhbY (CRM) domain SSUD12_RS01905 PF01467 Cytidylyltransferase-like SSUD12_RS01910 PF01966 HD domain SSUD12_RS01925 PF00857 Isochorismatase family SSUD12_RS01935 PF13649 Methyltransferase domain SSUD12_RS01940 PF05636 HIGH Nucleotidyl Transferase SSUD12_RS01950 PF02388 FemAB family SSUD12_RS01960 PF01327 Polypeptide deformylase SSUD12_RS01965 PF17871 AAA lid domain SSUD12_RS01965 PF10431 C-terminal, D2-small domain, of ClpB protein SSUD12_RS01965 PF07724 AAA domain (Cdc48 subfamily) SSUD12_RS01965 PF00004 ATPase family associated with various cellular activities (AAA) SSUD12_RS01970 PF02446 4-alpha-glucanotransferase SSUD12_RS01975 PF00343 Carbohydrate phosphorylase SSUD12_RS01985 PF03372 Endonuclease/Exonuclease/phosphatase family SSUD12_RS01990 PF02378 Phosphotransferase system, EIIC SSUD12_RS01990 PF00367 phosphotransferase system, EIIB SSUD12_RS01990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUD12_RS02005 PF01709 Transcriptional regulator SSUD12_RS02020 PF07155 ECF-type riboflavin transporter, S component SSUD12_RS02030 PF00581 Rhodanese-like domain SSUD12_RS02030 PF17773 UPF0176 acylphosphatase like domain SSUD12_RS02030 PF12368 Rhodanase C-terminal SSUD12_RS02040 PF12558 ATP-binding cassette cobalt transporter SSUD12_RS02040 PF00005 ABC transporter SSUD12_RS02050 PF00313 'Cold-shock' DNA-binding domain SSUD12_RS02055 PF02527 rRNA small subunit methyltransferase G SSUD12_RS02060 PF00905 Penicillin binding protein transpeptidase domain SSUD12_RS02060 PF00912 Transglycosylase SSUD12_RS02065 PF03838 Recombination protein U SSUD12_RS02070 PF06908 YspA SLOG family SSUD12_RS02075 PF05103 DivIVA protein SSUD12_RS02080 PF02926 THUMP domain SSUD12_RS02080 PF01170 Putative RNA methylase family UPF0020 SSUD12_RS02085 PF18041 MapZ extracellular domain 1 SSUD12_RS02085 PF18708 MapZ extracellular C-terminal domain 2 SSUD12_RS02090 PF02664 S-Ribosylhomocysteinase (LuxS) SSUD12_RS02095 PF12072 Domain of unknown function (DUF3552) SSUD12_RS02095 PF00013 KH domain SSUD12_RS02095 PF01966 HD domain SSUD12_RS02100 PF00625 Guanylate kinase SSUD12_RS02105 PF01192 RNA polymerase Rpb6 SSUD12_RS02110 PF18074 Primosomal protein N C-terminal domain SSUD12_RS02110 PF00271 Helicase conserved C-terminal domain SSUD12_RS02110 PF04851 Type III restriction enzyme, res subunit SSUD12_RS02110 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SSUD12_RS02110 PF17764 3′ DNA-binding domain (3′BD) SSUD12_RS02115 PF00551 Formyl transferase SSUD12_RS02115 PF02911 Formyl transferase, C-terminal domain SSUD12_RS02120 PF01029 NusB family SSUD12_RS02120 PF01189 16S rRNA methyltransferase RsmB/F SSUD12_RS02130 PF00069 Protein kinase domain SSUD12_RS02130 PF03793 PASTA domain SSUD12_RS02140 PF07730 Histidine kinase SSUD12_RS02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS02145 PF00072 Response regulator receiver domain SSUD12_RS02145 PF00196 Bacterial regulatory proteins, luxR family SSUD12_RS02150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSUD12_RS02155 PF00575 S1 RNA binding domain SSUD12_RS02160 PF00291 Pyridoxal-phosphate dependent enzyme SSUD12_RS02165 PF09186 Domain of unknown function (DUF1949) SSUD12_RS02165 PF01205 Uncharacterized protein family UPF0029 SSUD12_RS02170 PF00271 Helicase conserved C-terminal domain SSUD12_RS02170 PF04851 Type III restriction enzyme, res subunit SSUD12_RS02180 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SSUD12_RS02180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SSUD12_RS02265 PF05958 tRNA (Uracil-5-)-methyltransferase SSUD12_RS02265 PF01938 TRAM domain SSUD12_RS02270 PF02631 RecX family SSUD12_RS02275 PF04167 Protein of unknown function (DUF402) SSUD12_RS02285 PF07702 UTRA domain SSUD12_RS02285 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS02300 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS02300 PF07702 UTRA domain SSUD12_RS02305 PF01301 Glycosyl hydrolases family 35 SSUD12_RS02310 PF03830 PTS system sorbose subfamily IIB component SSUD12_RS02320 PF03613 PTS system mannose/fructose/sorbose family IID component SSUD12_RS02330 PF01263 Aldose 1-epimerase SSUD12_RS02360 PF00133 tRNA synthetases class I (I, L, M and V) SSUD12_RS02360 PF10458 Valyl tRNA synthetase tRNA binding arm SSUD12_RS02360 PF08264 Anticodon-binding domain of tRNA SSUD12_RS02375 PF00145 C-5 cytosine-specific DNA methylase SSUD12_RS02390 PF03590 Aspartate-ammonia ligase SSUD12_RS02395 PF14492 Elongation Factor G, domain II SSUD12_RS02395 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS02395 PF03144 Elongation factor Tu domain 2 SSUD12_RS02395 PF00679 Elongation factor G C-terminus SSUD12_RS02405 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS02405 PF08245 Mur ligase middle domain SSUD12_RS02410 PF04101 Glycosyltransferase family 28 C-terminal domain SSUD12_RS02410 PF03033 Glycosyltransferase family 28 N-terminal domain SSUD12_RS02415 PF08478 POTRA domain, FtsQ-type SSUD12_RS02420 PF02491 SHS2 domain inserted in FTSA SSUD12_RS02420 PF11983 Membrane-attachment and polymerisation-promoting switch SSUD12_RS02425 PF12327 FtsZ family, C-terminal domain SSUD12_RS02425 PF00091 Tubulin/FtsZ family, GTPase domain SSUD12_RS02430 PF01168 Alanine racemase, N-terminal domain SSUD12_RS02435 PF04472 Cell division protein SepF SSUD12_RS02450 PF05103 DivIVA protein SSUD12_RS02460 PF00133 tRNA synthetases class I (I, L, M and V) SSUD12_RS02460 PF08264 Anticodon-binding domain of tRNA SSUD12_RS02470 PF00300 Histidine phosphatase superfamily (branch 1) SSUD12_RS02470 PF00293 NUDIX domain SSUD12_RS02475 PF00004 ATPase family associated with various cellular activities (AAA) SSUD12_RS02475 PF17871 AAA lid domain SSUD12_RS02475 PF07724 AAA domain (Cdc48 subfamily) SSUD12_RS02475 PF10431 C-terminal, D2-small domain, of ClpB protein SSUD12_RS02480 PF08796 Protein of unknown function (DUF1797) SSUD12_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS02490 PF00005 ABC transporter SSUD12_RS02495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SSUD12_RS02495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SSUD12_RS02505 PF10502 Signal peptidase, peptidase S26 SSUD12_RS02515 PF13613 Helix-turn-helix of DDE superfamily endonuclease SSUD12_RS02515 PF13359 DDE superfamily endonuclease SSUD12_RS02530 PF13411 MerR HTH family regulatory protein SSUD12_RS02545 PF01136 Peptidase family U32 SSUD12_RS02545 PF16325 Peptidase family U32 C-terminal domain SSUD12_RS02555 PF02229 Transcriptional Coactivator p15 (PC4) SSUD12_RS02560 PF02632 BioY family SSUD12_RS02565 PF04199 Putative cyclase SSUD12_RS02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUD12_RS02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS02575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SSUD12_RS02580 PF00005 ABC transporter SSUD12_RS02585 PF12704 MacB-like periplasmic core domain SSUD12_RS02585 PF02687 FtsX-like permease family SSUD12_RS02680 PF01336 OB-fold nucleic acid binding domain SSUD12_RS02680 PF00152 tRNA synthetases class II (D, K and N) SSUD12_RS02690 PF04073 Aminoacyl-tRNA editing domain SSUD12_RS02700 PF09515 Thiamine transporter protein (Thia_YuaJ) SSUD12_RS02720 PF01098 Cell cycle protein SSUD12_RS02725 PF00311 Phosphoenolpyruvate carboxylase SSUD12_RS02740 PF03144 Elongation factor Tu domain 2 SSUD12_RS02740 PF03143 Elongation factor Tu C-terminal domain SSUD12_RS02740 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS02745 PF00121 Triosephosphate isomerase SSUD12_RS02755 PF01966 HD domain SSUD12_RS02770 PF00689 Cation transporting ATPase, C-terminus SSUD12_RS02770 PF00690 Cation transporter/ATPase, N-terminus SSUD12_RS02785 PF04892 VanZ like family SSUD12_RS02790 PF08331 Domain of unknown function (DUF1730) SSUD12_RS02800 PF00472 RF-1 domain SSUD12_RS02800 PF03462 PCRF domain SSUD12_RS02805 PF00005 ABC transporter SSUD12_RS02810 PF18075 FtsX extracellular domain SSUD12_RS02810 PF02687 FtsX-like permease family SSUD12_RS02815 PF17910 FeoB cytosolic helical domain SSUD12_RS02815 PF07670 Nucleoside recognition SSUD12_RS02815 PF07664 Ferrous iron transport protein B C terminus SSUD12_RS02815 PF02421 Ferrous iron transport protein B SSUD12_RS02835 PF00005 ABC transporter SSUD12_RS02835 PF00664 ABC transporter transmembrane region SSUD12_RS02840 PF00005 ABC transporter SSUD12_RS02840 PF00664 ABC transporter transmembrane region SSUD12_RS02845 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS02855 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SSUD12_RS02860 PF00367 phosphotransferase system, EIIB SSUD12_RS02860 PF02378 Phosphotransferase system, EIIC SSUD12_RS02860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUD12_RS02865 PF01380 SIS domain SSUD12_RS02865 PF01418 Helix-turn-helix domain, rpiR family SSUD12_RS02870 PF02130 Uncharacterized protein family UPF0054 SSUD12_RS02875 PF01219 Prokaryotic diacylglycerol kinase SSUD12_RS02880 PF07650 KH domain SSUD12_RS02880 PF01926 50S ribosome-binding GTPase SSUD12_RS02885 PF00583 Acetyltransferase (GNAT) family SSUD12_RS02890 PF06827 Zinc finger found in FPG and IleRS SSUD12_RS02890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SSUD12_RS02890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SSUD12_RS02895 PF01121 Dephospho-CoA kinase SSUD12_RS02900 PF07690 Major Facilitator Superfamily SSUD12_RS02900 PF00083 Sugar (and other) transporter SSUD12_RS02905 PF00471 Ribosomal protein L33 SSUD12_RS02915 PF00773 RNB domain SSUD12_RS02915 PF17876 Cold shock domain SSUD12_RS02915 PF00575 S1 RNA binding domain SSUD12_RS02915 PF08206 Ribonuclease B OB domain SSUD12_RS02920 PF01668 SmpB protein SSUD12_RS02940 PF00005 ABC transporter SSUD12_RS02960 PF08240 Alcohol dehydrogenase GroES-like domain SSUD12_RS02960 PF00107 Zinc-binding dehydrogenase SSUD12_RS02965 PF09313 Domain of unknown function (DUF1971) SSUD12_RS02965 PF03848 Tellurite resistance protein TehB SSUD12_RS02970 PF03577 Peptidase family C69 SSUD12_RS02975 PF00403 Heavy-metal-associated domain SSUD12_RS02980 PF08534 Redoxin SSUD12_RS02990 PF00005 ABC transporter SSUD12_RS03015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SSUD12_RS03015 PF00476 DNA polymerase family A SSUD12_RS03015 PF01367 5'-3' exonuclease, C-terminal SAM fold SSUD12_RS03025 PF13380 CoA binding domain SSUD12_RS03040 PF01702 Queuine tRNA-ribosyltransferase SSUD12_RS03050 PF01321 Creatinase/Prolidase N-terminal domain SSUD12_RS03050 PF00557 Metallopeptidase family M24 SSUD12_RS03055 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS03065 PF00534 Glycosyl transferases group 1 SSUD12_RS03065 PF13439 Glycosyltransferase Family 4 SSUD12_RS03070 PF13439 Glycosyltransferase Family 4 SSUD12_RS03070 PF00534 Glycosyl transferases group 1 SSUD12_RS03085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUD12_RS03085 PF02824 TGS domain SSUD12_RS03085 PF03129 Anticodon binding domain SSUD12_RS03085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSUD12_RS03090 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS03100 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS03105 PF00005 ABC transporter SSUD12_RS03110 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS03110 PF00072 Response regulator receiver domain SSUD12_RS03115 PF13426 PAS domain SSUD12_RS03115 PF00512 His Kinase A (phospho-acceptor) domain SSUD12_RS03115 PF00672 HAMP domain SSUD12_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS03120 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS03130 PF00905 Penicillin binding protein transpeptidase domain SSUD12_RS03130 PF03717 Penicillin-binding Protein dimerisation domain SSUD12_RS03135 PF13662 Toprim domain SSUD12_RS03135 PF02132 RecR protein SSUD12_RS03140 PF01820 D-ala D-ala ligase N-terminus SSUD12_RS03140 PF07478 D-ala D-ala ligase C-terminus SSUD12_RS03150 PF02687 FtsX-like permease family SSUD12_RS03155 PF00005 ABC transporter SSUD12_RS03160 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS03160 PF01225 Mur ligase family, catalytic domain SSUD12_RS03160 PF08245 Mur ligase middle domain SSUD12_RS03175 PF03144 Elongation factor Tu domain 2 SSUD12_RS03175 PF16658 Class II release factor RF3, C-terminal domain SSUD12_RS03175 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS03180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSUD12_RS03200 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS03205 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS03210 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS03215 PF01547 Bacterial extracellular solute-binding protein SSUD12_RS03220 PF08244 Glycosyl hydrolases family 32 C terminal SSUD12_RS03220 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSUD12_RS03225 PF17854 FtsK alpha domain SSUD12_RS03225 PF09397 Ftsk gamma domain SSUD12_RS03225 PF01580 FtsK/SpoIIIE family SSUD12_RS03230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSUD12_RS03240 PF03946 Ribosomal protein L11, N-terminal domain SSUD12_RS03240 PF00298 Ribosomal protein L11, RNA binding domain SSUD12_RS03245 PF00687 Ribosomal protein L1p/L10e family SSUD12_RS03255 PF02798 Glutathione S-transferase, N-terminal domain SSUD12_RS03260 PF01943 Polysaccharide biosynthesis protein SSUD12_RS03260 PF14667 Polysaccharide biosynthesis C-terminal domain SSUD12_RS03265 PF00696 Amino acid kinase family SSUD12_RS03270 PF01765 Ribosome recycling factor SSUD12_RS03275 PF13509 S1 domain SSUD12_RS03275 PF17783 CvfB-like winged helix domain SSUD12_RS03280 PF02558 Ketopantoate reductase PanE/ApbA SSUD12_RS03280 PF08546 Ketopantoate reductase PanE/ApbA C terminal SSUD12_RS03290 PF06855 YozE SAM-like fold SSUD12_RS03295 PF02562 PhoH-like protein SSUD12_RS03300 PF01717 Cobalamin-independent synthase, Catalytic domain SSUD12_RS03305 PF07690 Major Facilitator Superfamily SSUD12_RS03325 PF16360 GTP-binding GTPase Middle Region SSUD12_RS03325 PF01926 50S ribosome-binding GTPase SSUD12_RS03325 PF13167 GTP-binding GTPase N-terminal SSUD12_RS03335 PF12706 Beta-lactamase superfamily domain SSUD12_RS03335 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS03340 PF00106 short chain dehydrogenase SSUD12_RS03350 PF13091 PLD-like domain SSUD12_RS03355 PF02272 DHHA1 domain SSUD12_RS03355 PF01368 DHH family SSUD12_RS03355 PF17768 RecJ OB domain SSUD12_RS03355 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SSUD12_RS03365 PF00156 Phosphoribosyl transferase domain SSUD12_RS03370 PF04204 Homoserine O-succinyltransferase SSUD12_RS03380 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SSUD12_RS03385 PF01784 NIF3 (NGG1p interacting factor 3) SSUD12_RS03390 PF02535 ZIP Zinc transporter SSUD12_RS03395 PF00483 Nucleotidyl transferase SSUD12_RS03400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SSUD12_RS03415 PF16363 GDP-mannose 4,6 dehydratase SSUD12_RS03420 PF04321 RmlD substrate binding domain SSUD12_RS03435 PF05036 Sporulation related domain SSUD12_RS03435 PF01520 N-acetylmuramoyl-L-alanine amidase SSUD12_RS03455 PF01501 Glycosyl transferase family 8 SSUD12_RS03455 PF00535 Glycosyl transferase family 2 SSUD12_RS03465 PF00005 ABC transporter SSUD12_RS03465 PF14524 Wzt C-terminal domain SSUD12_RS03485 PF01501 Glycosyl transferase family 8 SSUD12_RS03490 PF01501 Glycosyl transferase family 8 SSUD12_RS03490 PF00535 Glycosyl transferase family 2 SSUD12_RS03500 PF00534 Glycosyl transferases group 1 SSUD12_RS03500 PF13439 Glycosyltransferase Family 4 SSUD12_RS03505 PF00535 Glycosyl transferase family 2 SSUD12_RS03535 PF02224 Cytidylate kinase SSUD12_RS03540 PF05198 Translation initiation factor IF-3, N-terminal domain SSUD12_RS03540 PF00707 Translation initiation factor IF-3, C-terminal domain SSUD12_RS03545 PF01632 Ribosomal protein L35 SSUD12_RS03550 PF00453 Ribosomal protein L20 SSUD12_RS03560 PF00884 Sulfatase SSUD12_RS03565 PF10672 S-adenosylmethionine-dependent methyltransferase SSUD12_RS03565 PF17785 PUA-like domain SSUD12_RS03570 PF01487 Type I 3-dehydroquinase SSUD12_RS03575 PF01264 Chorismate synthase SSUD12_RS03580 PF02153 Prephenate dehydrogenase SSUD12_RS03585 PF06133 Control of competence regulator ComK, YlbF/YmcA SSUD12_RS03590 PF01979 Amidohydrolase family SSUD12_RS03595 PF01791 DeoC/LacD family aldolase SSUD12_RS03615 PF02653 Branched-chain amino acid transport system / permease component SSUD12_RS03620 PF00005 ABC transporter SSUD12_RS03625 PF01761 3-dehydroquinate synthase SSUD12_RS03630 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SSUD12_RS03630 PF08501 Shikimate dehydrogenase substrate binding domain SSUD12_RS03635 PF00793 DAHP synthetase I family SSUD12_RS03640 PF00793 DAHP synthetase I family SSUD12_RS03650 PF01588 Putative tRNA binding domain SSUD12_RS03650 PF09334 tRNA synthetases class I (M) SSUD12_RS03660 PF05973 Phage derived protein Gp49-like (DUF891) SSUD12_RS03665 PF01381 Helix-turn-helix SSUD12_RS03670 PF08439 Oligopeptidase F SSUD12_RS03670 PF01432 Peptidase family M3 SSUD12_RS03695 PF01596 O-methyltransferase SSUD12_RS03700 PF13145 PPIC-type PPIASE domain SSUD12_RS03710 PF01411 tRNA synthetases class II (A) SSUD12_RS03710 PF02272 DHHA1 domain SSUD12_RS03710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSUD12_RS03730 PF01381 Helix-turn-helix SSUD12_RS03765 PF00268 Ribonucleotide reductase, small chain SSUD12_RS03770 PF02867 Ribonucleotide reductase, barrel domain SSUD12_RS03770 PF00317 Ribonucleotide reductase, all-alpha domain SSUD12_RS03770 PF08343 Ribonucleotide reductase N-terminal SSUD12_RS03775 PF00462 Glutaredoxin SSUD12_RS03780 PF00330 Aconitase family (aconitate hydratase) SSUD12_RS03780 PF00694 Aconitase C-terminal domain SSUD12_RS03785 PF00285 Citrate synthase, C-terminal domain SSUD12_RS03790 PF00180 Isocitrate/isopropylmalate dehydrogenase SSUD12_RS03795 PF00381 PTS HPr component phosphorylation site SSUD12_RS03800 PF05524 PEP-utilising enzyme, N-terminal SSUD12_RS03800 PF00391 PEP-utilising enzyme, mobile domain SSUD12_RS03800 PF02896 PEP-utilising enzyme, TIM barrel domain SSUD12_RS03810 PF08903 Domain of unknown function (DUF1846) SSUD12_RS03820 PF01022 Bacterial regulatory protein, arsR family SSUD12_RS03830 PF14622 Ribonuclease-III-like SSUD12_RS03830 PF00035 Double-stranded RNA binding motif SSUD12_RS03835 PF06470 SMC proteins Flexible Hinge Domain SSUD12_RS03835 PF02463 RecF/RecN/SMC N terminal domain SSUD12_RS03850 PF00448 SRP54-type protein, GTPase domain SSUD12_RS03850 PF02881 SRP54-type protein, helical bundle domain SSUD12_RS03865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SSUD12_RS03865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SSUD12_RS03870 PF09323 Domain of unknown function (DUF1980) SSUD12_RS03875 PF03773 Predicted permease SSUD12_RS03880 PF03120 NAD-dependent DNA ligase OB-fold domain SSUD12_RS03880 PF12826 Helix-hairpin-helix motif SSUD12_RS03880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SSUD12_RS03880 PF01653 NAD-dependent DNA ligase adenylation domain SSUD12_RS03880 PF00533 BRCA1 C Terminus (BRCT) domain SSUD12_RS03885 PF00781 Diacylglycerol kinase catalytic domain SSUD12_RS03890 PF00137 ATP synthase subunit C SSUD12_RS03895 PF00119 ATP synthase A chain SSUD12_RS03900 PF00430 ATP synthase B/B' CF(0) SSUD12_RS03905 PF00213 ATP synthase delta (OSCP) subunit SSUD12_RS03910 PF00306 ATP synthase alpha/beta chain, C terminal domain SSUD12_RS03910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSUD12_RS03910 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSUD12_RS03915 PF00231 ATP synthase SSUD12_RS03920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSUD12_RS03920 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSUD12_RS03925 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SSUD12_RS03925 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SSUD12_RS03935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSUD12_RS03940 PF11772 DNA-directed RNA polymerase subunit beta SSUD12_RS03945 PF01223 DNA/RNA non-specific endonuclease SSUD12_RS03955 PF00294 pfkB family carbohydrate kinase SSUD12_RS03960 PF00703 Glycosyl hydrolases family 2 SSUD12_RS03960 PF02837 Glycosyl hydrolases family 2, sugar binding domain SSUD12_RS03960 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SSUD12_RS03965 PF07729 FCD domain SSUD12_RS03965 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS03970 PF01081 KDPG and KHG aldolase SSUD12_RS03975 PF02614 Glucuronate isomerase SSUD12_RS03980 PF03786 D-mannonate dehydratase (UxuA) SSUD12_RS03985 PF00106 short chain dehydrogenase SSUD12_RS03995 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUD12_RS04000 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUD12_RS04005 PF01409 tRNA synthetases class II core domain (F) SSUD12_RS04005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SSUD12_RS04015 PF03483 B3/4 domain SSUD12_RS04015 PF03484 tRNA synthetase B5 domain SSUD12_RS04015 PF01588 Putative tRNA binding domain SSUD12_RS04015 PF03147 Ferredoxin-fold anticodon binding domain SSUD12_RS04015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SSUD12_RS04040 PF00293 NUDIX domain SSUD12_RS04045 PF01227 GTP cyclohydrolase I SSUD12_RS04050 PF00809 Pterin binding enzyme SSUD12_RS04055 PF02152 Dihydroneopterin aldolase SSUD12_RS04060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SSUD12_RS04070 PF01545 Cation efflux family SSUD12_RS04070 PF16916 Dimerisation domain of Zinc Transporter SSUD12_RS04085 PF01047 MarR family SSUD12_RS04090 PF06993 Protein of unknown function (DUF1304) SSUD12_RS04095 PF01797 Transposase IS200 like SSUD12_RS04120 PF07687 Peptidase dimerisation domain SSUD12_RS04120 PF01546 Peptidase family M20/M25/M40 SSUD12_RS04160 PF16198 tRNA pseudouridylate synthase B C-terminal domain SSUD12_RS04160 PF01509 TruB family pseudouridylate synthase (N terminal domain) SSUD12_RS04165 PF06574 FAD synthetase SSUD12_RS04165 PF01687 Riboflavin kinase SSUD12_RS04170 PF07885 Ion channel SSUD12_RS04175 PF03960 ArsC family SSUD12_RS04180 PF05256 Uncharacterised protein family (UPF0223) SSUD12_RS04185 PF00459 Inositol monophosphatase family SSUD12_RS04190 PF17126 RsmF rRNA methyltransferase first C-terminal domain SSUD12_RS04190 PF01189 16S rRNA methyltransferase RsmB/F SSUD12_RS04190 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SSUD12_RS04195 PF12849 PBP superfamily domain SSUD12_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS04205 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS04210 PF00005 ABC transporter SSUD12_RS04215 PF00005 ABC transporter SSUD12_RS04220 PF01895 PhoU domain SSUD12_RS04230 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS04230 PF00072 Response regulator receiver domain SSUD12_RS04235 PF00512 His Kinase A (phospho-acceptor) domain SSUD12_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS04245 PF01649 Ribosomal protein S20 SSUD12_RS04250 PF00485 Phosphoribulokinase / Uridine kinase family SSUD12_RS04255 PF05175 Methyltransferase small domain SSUD12_RS04260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SSUD12_RS04260 PF00591 Glycosyl transferase family, a/b domain SSUD12_RS04260 PF02885 Glycosyl transferase family, helical bundle domain SSUD12_RS04265 PF01791 DeoC/LacD family aldolase SSUD12_RS04270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSUD12_RS04275 PF02608 ABC transporter substrate-binding protein PnrA-like SSUD12_RS04280 PF00005 ABC transporter SSUD12_RS04285 PF02653 Branched-chain amino acid transport system / permease component SSUD12_RS04290 PF02653 Branched-chain amino acid transport system / permease component SSUD12_RS04295 PF01872 RibD C-terminal domain SSUD12_RS04300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SSUD12_RS04300 PF00056 lactate/malate dehydrogenase, NAD binding domain SSUD12_RS04305 PF00521 DNA gyrase/topoisomerase IV, subunit A SSUD12_RS04305 PF03989 DNA gyrase C-terminal domain, beta-propeller SSUD12_RS04310 PF04203 Sortase domain SSUD12_RS04315 PF04002 RadC-like JAB domain SSUD12_RS04320 PF07722 Peptidase C26 SSUD12_RS04325 PF06971 Putative DNA-binding protein N-terminus SSUD12_RS04325 PF02629 CoA binding domain SSUD12_RS04340 PF00266 Aminotransferase class-V SSUD12_RS04345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSUD12_RS04345 PF14572 Phosphoribosyl synthetase-associated domain SSUD12_RS04350 PF01928 CYTH domain SSUD12_RS04355 PF04607 Region found in RelA / SpoT proteins SSUD12_RS04360 PF01513 ATP-NAD kinase SSUD12_RS04365 PF00849 RNA pseudouridylate synthase SSUD12_RS04370 PF01515 Phosphate acetyl/butaryl transferase SSUD12_RS04375 PF00664 ABC transporter transmembrane region SSUD12_RS04375 PF00005 ABC transporter SSUD12_RS04380 PF00005 ABC transporter SSUD12_RS04380 PF00664 ABC transporter transmembrane region SSUD12_RS04390 PF00730 HhH-GPD superfamily base excision DNA repair protein SSUD12_RS04390 PF14815 NUDIX domain SSUD12_RS04395 PF08671 Anti-repressor SinI SSUD12_RS04395 PF01381 Helix-turn-helix SSUD12_RS04415 PF01053 Cys/Met metabolism PLP-dependent enzyme SSUD12_RS04420 PF00005 ABC transporter SSUD12_RS04420 PF12848 ABC transporter SSUD12_RS04430 PF00005 ABC transporter SSUD12_RS04435 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS04440 PF00271 Helicase conserved C-terminal domain SSUD12_RS04440 PF04851 Type III restriction enzyme, res subunit SSUD12_RS04440 PF02151 UvrB/uvrC motif SSUD12_RS04440 PF12344 Ultra-violet resistance protein B SSUD12_RS04440 PF17757 UvrB interaction domain SSUD12_RS04450 PF04650 YSIRK type signal peptide SSUD12_RS04450 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region SSUD12_RS04450 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region SSUD12_RS04450 PF07501 G5 domain SSUD12_RS04460 PF00293 NUDIX domain SSUD12_RS04465 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS04470 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS04475 PF00128 Alpha amylase, catalytic domain SSUD12_RS04475 PF02806 Alpha amylase, C-terminal all-beta domain SSUD12_RS04475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUD12_RS04480 PF08323 Starch synthase catalytic domain SSUD12_RS04480 PF00534 Glycosyl transferases group 1 SSUD12_RS04485 PF00483 Nucleotidyl transferase SSUD12_RS04485 PF00132 Bacterial transferase hexapeptide (six repeats) SSUD12_RS04490 PF00483 Nucleotidyl transferase SSUD12_RS04495 PF03466 LysR substrate binding domain SSUD12_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSUD12_RS04500 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SSUD12_RS04505 PF01180 Dihydroorotate dehydrogenase SSUD12_RS04510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSUD12_RS04515 PF00719 Inorganic pyrophosphatase SSUD12_RS04520 PF00156 Phosphoribosyl transferase domain SSUD12_RS04525 PF00535 Glycosyl transferase family 2 SSUD12_RS04530 PF03167 Uracil DNA glycosylase superfamily SSUD12_RS04535 PF01979 Amidohydrolase family SSUD12_RS04540 PF00149 Calcineurin-like phosphoesterase SSUD12_RS04540 PF02872 5'-nucleotidase, C-terminal domain SSUD12_RS04545 PF02545 Maf-like protein SSUD12_RS04555 PF01926 50S ribosome-binding GTPase SSUD12_RS04560 PF01351 Ribonuclease HII SSUD12_RS04570 PF03006 Haemolysin-III related SSUD12_RS04580 PF01206 Sulfurtransferase TusA SSUD12_RS04580 PF00581 Rhodanese-like domain SSUD12_RS04585 PF12464 Maltose acetyltransferase SSUD12_RS04585 PF14602 Hexapeptide repeat of succinyl-transferase SSUD12_RS04590 PF18255 DNA processing protein A sterile alpha motif domain SSUD12_RS04590 PF02481 DNA recombination-mediator protein A SSUD12_RS04595 PF01131 DNA topoisomerase SSUD12_RS04595 PF01396 Topoisomerase DNA binding C4 zinc finger SSUD12_RS04595 PF01751 Toprim domain SSUD12_RS04600 PF00466 Ribosomal protein L10 SSUD12_RS04605 PF00542 Ribosomal protein L7/L12 C-terminal domain SSUD12_RS04605 PF16320 Ribosomal protein L7/L12 dimerisation domain SSUD12_RS04635 PF12161 HsdM N-terminal domain SSUD12_RS04635 PF02384 N-6 DNA Methylase SSUD12_RS04645 PF01134 Glucose inhibited division protein A SSUD12_RS04655 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase SSUD12_RS04655 PF00756 Putative esterase SSUD12_RS04685 PF00005 ABC transporter SSUD12_RS04705 PF00072 Response regulator receiver domain SSUD12_RS04705 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS04710 PF00512 His Kinase A (phospho-acceptor) domain SSUD12_RS04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS04720 PF13495 Phage integrase, N-terminal SAM-like domain SSUD12_RS04720 PF00589 Phage integrase family SSUD12_RS04740 PF00448 SRP54-type protein, GTPase domain SSUD12_RS04740 PF02881 SRP54-type protein, helical bundle domain SSUD12_RS04740 PF02978 Signal peptide binding domain SSUD12_RS04745 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SSUD12_RS04750 PF07702 UTRA domain SSUD12_RS04750 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS04755 PF00117 Glutamine amidotransferase class-I SSUD12_RS04755 PF02540 NAD synthase SSUD12_RS04755 PF00958 GMP synthase C terminal domain SSUD12_RS04760 PF10117 McrBC 5-methylcytosine restriction system component SSUD12_RS04765 PF12102 Domain of unknown function (DUF3578) SSUD12_RS04765 PF07728 AAA domain (dynein-related subfamily) SSUD12_RS04790 PF00106 short chain dehydrogenase SSUD12_RS04805 PF00464 Serine hydroxymethyltransferase SSUD12_RS04815 PF03481 Putative GTP-binding controlling metal-binding SSUD12_RS04815 PF01300 Telomere recombination SSUD12_RS04820 PF05175 Methyltransferase small domain SSUD12_RS04825 PF00472 RF-1 domain SSUD12_RS04825 PF03462 PCRF domain SSUD12_RS04830 PF00265 Thymidine kinase SSUD12_RS04845 PF01361 Tautomerase enzyme SSUD12_RS04850 PF03144 Elongation factor Tu domain 2 SSUD12_RS04850 PF06421 GTP-binding protein LepA C-terminus SSUD12_RS04850 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS04850 PF00679 Elongation factor G C-terminus SSUD12_RS04850 PF14492 Elongation Factor G, domain II SSUD12_RS04855 PF00334 Nucleoside diphosphate kinase SSUD12_RS04860 PF01926 50S ribosome-binding GTPase SSUD12_RS04865 PF06689 ClpX C4-type zinc finger SSUD12_RS04865 PF07724 AAA domain (Cdc48 subfamily) SSUD12_RS04865 PF10431 C-terminal, D2-small domain, of ClpB protein SSUD12_RS04875 PF00186 Dihydrofolate reductase SSUD12_RS04880 PF00303 Thymidylate synthase SSUD12_RS04895 PF00480 ROK family SSUD12_RS04905 PF16326 ABC transporter C-terminal domain SSUD12_RS04905 PF00005 ABC transporter SSUD12_RS04905 PF12848 ABC transporter SSUD12_RS04910 PF12627 Probable RNA and SrmB- binding site of polymerase A SSUD12_RS04910 PF13735 tRNA nucleotidyltransferase domain 2 putative SSUD12_RS04910 PF01743 Poly A polymerase head domain SSUD12_RS04915 PF05173 Dihydrodipicolinate reductase, C-terminus SSUD12_RS04915 PF01113 Dihydrodipicolinate reductase, N-terminus SSUD12_RS04920 PF02645 Uncharacterised protein, DegV family COG1307 SSUD12_RS04930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS04930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUD12_RS04935 PF00294 pfkB family carbohydrate kinase SSUD12_RS04940 PF08220 DeoR-like helix-turn-helix domain SSUD12_RS04940 PF00455 DeoR C terminal sensor domain SSUD12_RS04945 PF00155 Aminotransferase class I and II SSUD12_RS04950 PF01746 tRNA (Guanine-1)-methyltransferase SSUD12_RS04955 PF01782 RimM N-terminal domain SSUD12_RS04955 PF05239 PRC-barrel domain SSUD12_RS04960 PF01554 MatE SSUD12_RS04965 PF00478 IMP dehydrogenase / GMP reductase domain SSUD12_RS04970 PF00730 HhH-GPD superfamily base excision DNA repair protein SSUD12_RS04970 PF00633 Helix-hairpin-helix motif SSUD12_RS04970 PF10576 Iron-sulfur binding domain of endonuclease III SSUD12_RS04975 PF01256 Carbohydrate kinase SSUD12_RS04980 PF00082 Subtilase family SSUD12_RS04980 PF02225 PA domain SSUD12_RS04980 PF06280 Fn3-like domain SSUD12_RS04985 PF13416 Bacterial extracellular solute-binding protein SSUD12_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS05000 PF00005 ABC transporter SSUD12_RS05000 PF08402 TOBE domain SSUD12_RS05005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SSUD12_RS05005 PF01565 FAD binding domain SSUD12_RS05010 PF08544 GHMP kinases C terminal SSUD12_RS05010 PF00288 GHMP kinases N terminal domain SSUD12_RS05015 PF03447 Homoserine dehydrogenase, NAD binding domain SSUD12_RS05015 PF00742 Homoserine dehydrogenase SSUD12_RS05020 PF01522 Polysaccharide deacetylase SSUD12_RS05065 PF01797 Transposase IS200 like SSUD12_RS05075 PF05239 PRC-barrel domain SSUD12_RS05075 PF01782 RimM N-terminal domain SSUD12_RS05080 PF00005 ABC transporter SSUD12_RS05080 PF00664 ABC transporter transmembrane region SSUD12_RS05085 PF00005 ABC transporter SSUD12_RS05085 PF00664 ABC transporter transmembrane region SSUD12_RS05095 PF00886 Ribosomal protein S16 SSUD12_RS05105 PF01470 Pyroglutamyl peptidase SSUD12_RS05130 PF02142 MGS-like domain SSUD12_RS05130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSUD12_RS05130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSUD12_RS05135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SSUD12_RS05135 PF00117 Glutamine amidotransferase class-I SSUD12_RS05140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSUD12_RS05140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSUD12_RS05145 PF00156 Phosphoribosyl transferase domain SSUD12_RS05155 PF08274 PhnA Zinc-Ribbon SSUD12_RS05155 PF03831 PhnA domain SSUD12_RS05160 PF01479 S4 domain SSUD12_RS05160 PF00849 RNA pseudouridylate synthase SSUD12_RS05165 PF01252 Signal peptidase (SPase) II SSUD12_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSUD12_RS05170 PF03466 LysR substrate binding domain SSUD12_RS05180 PF01016 Ribosomal L27 protein SSUD12_RS05185 PF00829 Ribosomal prokaryotic L21 protein SSUD12_RS05195 PF03432 Relaxase/Mobilisation nuclease domain SSUD12_RS05250 PF01476 LysM domain SSUD12_RS05250 PF05257 CHAP domain SSUD12_RS05290 PF06696 Streptococcal surface antigen repeat SSUD12_RS05290 PF08363 Glucan-binding protein C SSUD12_RS05290 PF18652 Adhesin P1 N-terminal domain SSUD12_RS05290 PF17998 Cell surface antigen I/II C2 terminal domain SSUD12_RS05290 PF16364 Cell surface antigen C-terminus SSUD12_RS05305 PF01381 Helix-turn-helix SSUD12_RS05340 PF05525 Branched-chain amino acid transport protein SSUD12_RS05345 PF02926 THUMP domain SSUD12_RS05345 PF02568 Thiamine biosynthesis protein (ThiI) SSUD12_RS05350 PF00266 Aminotransferase class-V SSUD12_RS05375 PF00575 S1 RNA binding domain SSUD12_RS05395 PF01063 Amino-transferase class IV SSUD12_RS05405 PF03989 DNA gyrase C-terminal domain, beta-propeller SSUD12_RS05405 PF00521 DNA gyrase/topoisomerase IV, subunit A SSUD12_RS05415 PF00204 DNA gyrase B SSUD12_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS05415 PF01751 Toprim domain SSUD12_RS05415 PF00986 DNA gyrase B subunit, carboxyl terminus SSUD12_RS05420 PF02660 Glycerol-3-phosphate acyltransferase SSUD12_RS05425 PF00580 UvrD/REP helicase N-terminal domain SSUD12_RS05425 PF13361 UvrD-like helicase C-terminal domain SSUD12_RS05425 PF12705 PD-(D/E)XK nuclease superfamily SSUD12_RS05430 PF12705 PD-(D/E)XK nuclease superfamily SSUD12_RS05440 PF09269 Domain of unknown function (DUF1967) SSUD12_RS05440 PF01018 GTP1/OBG SSUD12_RS05440 PF01926 50S ribosome-binding GTPase SSUD12_RS05455 PF08459 UvrC Helix-hairpin-helix N-terminal SSUD12_RS05455 PF02151 UvrB/uvrC motif SSUD12_RS05455 PF01541 GIY-YIG catalytic domain SSUD12_RS05460 PF00005 ABC transporter SSUD12_RS05495 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS05505 PF00580 UvrD/REP helicase N-terminal domain SSUD12_RS05505 PF13361 UvrD-like helicase C-terminal domain SSUD12_RS05510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUD12_RS05510 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS05520 PF08439 Oligopeptidase F SSUD12_RS05520 PF01432 Peptidase family M3 SSUD12_RS05530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSUD12_RS05535 PF00230 Major intrinsic protein SSUD12_RS05540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SSUD12_RS05540 PF01266 FAD dependent oxidoreductase SSUD12_RS05545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSUD12_RS05545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSUD12_RS05555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUD12_RS05555 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS05560 PF00701 Dihydrodipicolinate synthetase family SSUD12_RS05565 PF02774 Semialdehyde dehydrogenase, dimerisation domain SSUD12_RS05565 PF01118 Semialdehyde dehydrogenase, NAD binding domain SSUD12_RS05570 PF00465 Iron-containing alcohol dehydrogenase SSUD12_RS05580 PF00923 Transaldolase/Fructose-6-phosphate aldolase SSUD12_RS05585 PF01228 Glycine radical SSUD12_RS05585 PF02901 Pyruvate formate lyase-like SSUD12_RS05590 PF02378 Phosphotransferase system, EIIC SSUD12_RS05595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS05600 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUD12_RS05605 PF13936 Helix-turn-helix domain SSUD12_RS05605 PF04198 Putative sugar-binding domain SSUD12_RS05610 PF00455 DeoR C terminal sensor domain SSUD12_RS05610 PF08220 DeoR-like helix-turn-helix domain SSUD12_RS05615 PF04055 Radical SAM superfamily SSUD12_RS05645 PF01797 Transposase IS200 like SSUD12_RS05650 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS05650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUD12_RS05660 PF01268 Formate--tetrahydrofolate ligase SSUD12_RS05665 PF04127 DNA / pantothenate metabolism flavoprotein SSUD12_RS05665 PF02441 Flavoprotein SSUD12_RS05670 PF02441 Flavoprotein SSUD12_RS05675 PF12822 ECF transporter, substrate-specific component SSUD12_RS05680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSUD12_RS05680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSUD12_RS05680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSUD12_RS05680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSUD12_RS05715 PF13520 Amino acid permease SSUD12_RS05725 PF03372 Endonuclease/Exonuclease/phosphatase family SSUD12_RS05735 PF03960 ArsC family SSUD12_RS05740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SSUD12_RS05740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SSUD12_RS05745 PF01842 ACT domain SSUD12_RS05745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SSUD12_RS05745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SSUD12_RS05755 PF00266 Aminotransferase class-V SSUD12_RS05760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SSUD12_RS05765 PF06156 Initiation control protein YabA SSUD12_RS05770 PF09115 DNA polymerase III, delta subunit, C terminal SSUD12_RS05775 PF02223 Thymidylate kinase SSUD12_RS05780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUD12_RS05780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUD12_RS05795 PF00571 CBS domain SSUD12_RS05800 PF13567 Domain of unknown function (DUF4131) SSUD12_RS05800 PF03772 Competence protein SSUD12_RS05800 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS05825 PF00239 Resolvase, N terminal domain SSUD12_RS05825 PF02796 Helix-turn-helix domain of resolvase SSUD12_RS05840 PF05257 CHAP domain SSUD12_RS05840 PF08460 Bacterial SH3 domain SSUD12_RS05840 PF01520 N-acetylmuramoyl-L-alanine amidase SSUD12_RS05845 PF05105 Bacteriophage holin family SSUD12_RS05915 PF00574 Clp protease SSUD12_RS05920 PF04860 Phage portal protein SSUD12_RS05955 PF00145 C-5 cytosine-specific DNA methylase SSUD12_RS05980 PF02773 S-adenosylmethionine synthetase, C-terminal domain SSUD12_RS05980 PF02772 S-adenosylmethionine synthetase, central domain SSUD12_RS05980 PF00438 S-adenosylmethionine synthetase, N-terminal domain SSUD12_RS06025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SSUD12_RS06025 PF01612 3'-5' exonuclease SSUD12_RS06025 PF00476 DNA polymerase family A SSUD12_RS06025 PF01367 5'-3' exonuclease, C-terminal SAM fold SSUD12_RS06055 PF00145 C-5 cytosine-specific DNA methylase SSUD12_RS06060 PF01555 DNA methylase SSUD12_RS06080 PF11798 IMS family HHH motif SSUD12_RS06080 PF11799 impB/mucB/samB family C-terminal domain SSUD12_RS06080 PF00817 impB/mucB/samB family SSUD12_RS06095 PF01791 DeoC/LacD family aldolase SSUD12_RS06100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS06100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUD12_RS06105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS06105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUD12_RS06110 PF00294 pfkB family carbohydrate kinase SSUD12_RS06115 PF01380 SIS domain SSUD12_RS06115 PF01418 Helix-turn-helix domain, rpiR family SSUD12_RS06135 PF13567 Domain of unknown function (DUF4131) SSUD12_RS06135 PF03772 Competence protein SSUD12_RS06135 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS06140 PF10531 SLBB domain SSUD12_RS06145 PF01553 Acyltransferase SSUD12_RS06150 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS06150 PF08245 Mur ligase middle domain SSUD12_RS06155 PF00005 ABC transporter SSUD12_RS06160 PF01497 Periplasmic binding protein SSUD12_RS06165 PF01032 FecCD transport family SSUD12_RS06170 PF01032 FecCD transport family SSUD12_RS06175 PF00255 Glutathione peroxidase SSUD12_RS06180 PF01479 S4 domain SSUD12_RS06180 PF00849 RNA pseudouridylate synthase SSUD12_RS06185 PF13409 Glutathione S-transferase, N-terminal domain SSUD12_RS06205 PF00550 Phosphopantetheine attachment site SSUD12_RS06210 PF03062 MBOAT, membrane-bound O-acyltransferase family SSUD12_RS06215 PF13193 AMP-binding enzyme C-terminal domain SSUD12_RS06215 PF00501 AMP-binding enzyme SSUD12_RS06265 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSUD12_RS06270 PF02547 Queuosine biosynthesis protein SSUD12_RS06275 PF01316 Arginine repressor, DNA binding domain SSUD12_RS06275 PF02863 Arginine repressor, C-terminal domain SSUD12_RS06280 PF04650 YSIRK type signal peptide SSUD12_RS06280 PF00746 LPXTG cell wall anchor motif SSUD12_RS06280 PF00728 Glycosyl hydrolase family 20, catalytic domain SSUD12_RS06280 PF07501 G5 domain SSUD12_RS06290 PF03606 C4-dicarboxylate anaerobic carrier SSUD12_RS06295 PF00696 Amino acid kinase family SSUD12_RS06300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSUD12_RS06300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSUD12_RS06305 PF13673 Acetyltransferase (GNAT) domain SSUD12_RS06320 PF10298 WhiA N-terminal LAGLIDADG-like domain SSUD12_RS06320 PF14527 WhiA LAGLIDADG-like domain SSUD12_RS06320 PF02650 WhiA C-terminal HTH domain SSUD12_RS06325 PF01933 Uncharacterised protein family UPF0052 SSUD12_RS06330 PF03668 P-loop ATPase protein family SSUD12_RS06335 PF01042 Endoribonuclease L-PSP SSUD12_RS06345 PF01554 MatE SSUD12_RS06350 PF01336 OB-fold nucleic acid binding domain SSUD12_RS06350 PF00152 tRNA synthetases class II (D, K and N) SSUD12_RS06355 PF00155 Aminotransferase class I and II SSUD12_RS06370 PF02525 Flavodoxin-like fold SSUD12_RS06375 PF03275 UDP-galactopyranose mutase SSUD12_RS06400 PF00664 ABC transporter transmembrane region SSUD12_RS06400 PF00005 ABC transporter SSUD12_RS06400 PF03412 Peptidase C39 family SSUD12_RS06450 PF07690 Major Facilitator Superfamily SSUD12_RS06470 PF06414 Zeta toxin SSUD12_RS06475 PF01381 Helix-turn-helix SSUD12_RS06505 PF00072 Response regulator receiver domain SSUD12_RS06505 PF00196 Bacterial regulatory proteins, luxR family SSUD12_RS06525 PF00005 ABC transporter SSUD12_RS06530 PF00664 ABC transporter transmembrane region SSUD12_RS06530 PF00005 ABC transporter SSUD12_RS06540 PF04604 Type-A lantibiotic SSUD12_RS06555 PF02229 Transcriptional Coactivator p15 (PC4) SSUD12_RS06560 PF17762 HTH domain found in ParB protein SSUD12_RS06560 PF02195 ParB-like nuclease domain SSUD12_RS06565 PF01076 Plasmid recombination enzyme SSUD12_RS06590 PF03764 Elongation factor G, domain IV SSUD12_RS06590 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS06590 PF14492 Elongation Factor G, domain II SSUD12_RS06590 PF00679 Elongation factor G C-terminus SSUD12_RS06615 PF18652 Adhesin P1 N-terminal domain SSUD12_RS06615 PF16364 Cell surface antigen C-terminus SSUD12_RS06615 PF08363 Glucan-binding protein C SSUD12_RS06615 PF17998 Cell surface antigen I/II C2 terminal domain SSUD12_RS06615 PF06696 Streptococcal surface antigen repeat SSUD12_RS06685 PF00145 C-5 cytosine-specific DNA methylase SSUD12_RS06700 PF01909 Nucleotidyltransferase domain SSUD12_RS06700 PF13427 Domain of unknown function (DUF4111) SSUD12_RS06705 PF00156 Phosphoribosyl transferase domain SSUD12_RS06710 PF04439 Streptomycin adenylyltransferase SSUD12_RS06715 PF00398 Ribosomal RNA adenine dimethylase SSUD12_RS06720 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) SSUD12_RS06730 PF01938 TRAM domain SSUD12_RS06730 PF05958 tRNA (Uracil-5-)-methyltransferase SSUD12_RS06735 PF03816 Cell envelope-related transcriptional attenuator domain SSUD12_RS06740 PF00800 Prephenate dehydratase SSUD12_RS06745 PF01202 Shikimate kinase SSUD12_RS06750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSUD12_RS06760 PF03275 UDP-galactopyranose mutase SSUD12_RS06775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SSUD12_RS06790 PF04991 LicD family SSUD12_RS06795 PF00535 Glycosyl transferase family 2 SSUD12_RS06795 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SSUD12_RS06800 PF00535 Glycosyl transferase family 2 SSUD12_RS06805 PF02397 Bacterial sugar transferase SSUD12_RS06810 PF02719 Polysaccharide biosynthesis protein SSUD12_RS06820 PF13614 AAA domain SSUD12_RS06825 PF02706 Chain length determinant protein SSUD12_RS06830 PF03816 Cell envelope-related transcriptional attenuator domain SSUD12_RS06835 PF03883 Peroxide stress protein YaaA SSUD12_RS06840 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS06840 PF00155 Aminotransferase class I and II SSUD12_RS06845 PF02645 Uncharacterised protein, DegV family COG1307 SSUD12_RS06860 PF14748 Pyrroline-5-carboxylate reductase dimerisation SSUD12_RS06860 PF03807 NADP oxidoreductase coenzyme F420-dependent SSUD12_RS06865 PF00171 Aldehyde dehydrogenase family SSUD12_RS06870 PF00696 Amino acid kinase family SSUD12_RS06870 PF01472 PUA domain SSUD12_RS06875 PF13307 Helicase C-terminal domain SSUD12_RS06875 PF00929 Exonuclease SSUD12_RS06880 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS06890 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS06895 PF00005 ABC transporter SSUD12_RS06900 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS06905 PF01380 SIS domain SSUD12_RS06910 PF10502 Signal peptidase, peptidase S26 SSUD12_RS06915 PF07859 alpha/beta hydrolase fold SSUD12_RS06915 PF13472 GDSL-like Lipase/Acylhydrolase family SSUD12_RS06920 PF01266 FAD dependent oxidoreductase SSUD12_RS06930 PF02887 Pyruvate kinase, alpha/beta domain SSUD12_RS06930 PF00224 Pyruvate kinase, barrel domain SSUD12_RS06935 PF00365 Phosphofructokinase SSUD12_RS06940 PF14579 Helix-hairpin-helix motif SSUD12_RS06940 PF01336 OB-fold nucleic acid binding domain SSUD12_RS06940 PF02811 PHP domain SSUD12_RS06940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSUD12_RS06940 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSUD12_RS06945 PF00392 Bacterial regulatory proteins, gntR family SSUD12_RS06945 PF07702 UTRA domain SSUD12_RS06950 PF00005 ABC transporter SSUD12_RS06960 PF00962 Adenosine/AMP deaminase SSUD12_RS06985 PF04371 Porphyromonas-type peptidyl-arginine deiminase SSUD12_RS06990 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SSUD12_RS06995 PF16653 Saccharopine dehydrogenase C-terminal domain SSUD12_RS06995 PF03435 Saccharopine dehydrogenase NADP binding domain SSUD12_RS07000 PF17284 Spermidine synthase tetramerisation domain SSUD12_RS07005 PF01276 Orn/Lys/Arg decarboxylase, major domain SSUD12_RS07005 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SSUD12_RS07010 PF01883 Iron-sulfur cluster assembly protein SSUD12_RS07015 PF03979 Sigma-70 factor, region 1.1 SSUD12_RS07015 PF04545 Sigma-70, region 4 SSUD12_RS07015 PF00140 Sigma-70 factor, region 1.2 SSUD12_RS07015 PF04542 Sigma-70 region 2 SSUD12_RS07015 PF04539 Sigma-70 region 3 SSUD12_RS07020 PF01807 CHC2 zinc finger SSUD12_RS07020 PF08275 DNA primase catalytic core, N-terminal domain SSUD12_RS07020 PF10410 DnaB-helicase binding domain of primase SSUD12_RS07025 PF01741 Large-conductance mechanosensitive channel, MscL SSUD12_RS07030 PF01610 Transposase SSUD12_RS07030 PF13683 Integrase core domain SSUD12_RS07035 PF16363 GDP-mannose 4,6 dehydratase SSUD12_RS07040 PF01165 Ribosomal protein S21 SSUD12_RS07050 PF13344 Haloacid dehalogenase-like hydrolase SSUD12_RS07055 PF00293 NUDIX domain SSUD12_RS07065 PF06969 HemN C-terminal domain SSUD12_RS07065 PF04055 Radical SAM superfamily SSUD12_RS07075 PF00343 Carbohydrate phosphorylase SSUD12_RS07080 PF01048 Phosphorylase superfamily SSUD12_RS07085 PF01048 Phosphorylase superfamily SSUD12_RS07095 PF01676 Metalloenzyme superfamily SSUD12_RS07100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SSUD12_RS07105 PF12161 HsdM N-terminal domain SSUD12_RS07105 PF02384 N-6 DNA Methylase SSUD12_RS07130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSUD12_RS07130 PF18766 SWI2/SNF2 ATPase SSUD12_RS07130 PF12008 Type I restriction and modification enzyme - subunit R C terminal SSUD12_RS07135 PF01926 50S ribosome-binding GTPase SSUD12_RS07135 PF10396 GTP-binding protein TrmE N-terminus SSUD12_RS07135 PF12631 MnmE helical domain SSUD12_RS07150 PF15975 Flotillin SSUD12_RS07150 PF01145 SPFH domain / Band 7 family SSUD12_RS07155 PF04011 LemA family SSUD12_RS07165 PF03167 Uracil DNA glycosylase superfamily SSUD12_RS07175 PF01546 Peptidase family M20/M25/M40 SSUD12_RS07180 PF00375 Sodium:dicarboxylate symporter family SSUD12_RS07190 PF08241 Methyltransferase domain SSUD12_RS07195 PF00005 ABC transporter SSUD12_RS07195 PF12848 ABC transporter SSUD12_RS07200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSUD12_RS07200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSUD12_RS07200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSUD12_RS07200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSUD12_RS07210 PF02457 DisA bacterial checkpoint controller nucleotide-binding SSUD12_RS07215 PF08245 Mur ligase middle domain SSUD12_RS07215 PF08353 Domain of unknown function (DUF1727) SSUD12_RS07220 PF07685 CobB/CobQ-like glutamine amidotransferase domain SSUD12_RS07225 PF13847 Methyltransferase domain SSUD12_RS07235 PF12848 ABC transporter SSUD12_RS07235 PF16326 ABC transporter C-terminal domain SSUD12_RS07235 PF00005 ABC transporter SSUD12_RS07250 PF00756 Putative esterase SSUD12_RS07260 PF17770 Ribonuclease J C-terminal domain SSUD12_RS07260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SSUD12_RS07260 PF00753 Metallo-beta-lactamase superfamily SSUD12_RS07275 PF00005 ABC transporter SSUD12_RS07275 PF08402 TOBE domain SSUD12_RS07295 PF05670 NFACT protein RNA binding domain SSUD12_RS07300 PF03306 Alpha-acetolactate decarboxylase SSUD12_RS07310 PF01594 AI-2E family transporter SSUD12_RS07315 PF10282 Lactonase, 7-bladed beta-propeller SSUD12_RS07325 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS07330 PF03952 Enolase, N-terminal domain SSUD12_RS07330 PF00113 Enolase, C-terminal TIM barrel domain SSUD12_RS07340 PF02595 Glycerate kinase family SSUD12_RS07345 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS07355 PF06160 Septation ring formation regulator, EzrA SSUD12_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS07360 PF00986 DNA gyrase B subunit, carboxyl terminus SSUD12_RS07360 PF00204 DNA gyrase B SSUD12_RS07360 PF01751 Toprim domain SSUD12_RS07365 PF01965 DJ-1/PfpI family SSUD12_RS07370 PF01098 Cell cycle protein SSUD12_RS07385 PF01197 Ribosomal protein L31 SSUD12_RS07390 PF02424 ApbE family SSUD12_RS07395 PF02272 DHHA1 domain SSUD12_RS07395 PF01368 DHH family SSUD12_RS07400 PF00258 Flavodoxin SSUD12_RS07405 PF00253 Ribosomal protein S14p/S29e SSUD12_RS07410 PF02153 Prephenate dehydrogenase SSUD12_RS07410 PF01817 Chorismate mutase type II SSUD12_RS07415 PF00654 Voltage gated chloride channel SSUD12_RS07425 PF17936 Bacterial Ig domain SSUD12_RS07425 PF00149 Calcineurin-like phosphoesterase SSUD12_RS07425 PF02872 5'-nucleotidase, C-terminal domain SSUD12_RS07430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SSUD12_RS07430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SSUD12_RS07435 PF06144 DNA polymerase III, delta subunit SSUD12_RS07445 PF02677 Epoxyqueuosine reductase QueH SSUD12_RS07450 PF00005 ABC transporter SSUD12_RS07455 PF00005 ABC transporter SSUD12_RS07455 PF12399 Branched-chain amino acid ATP-binding cassette transporter SSUD12_RS07460 PF02653 Branched-chain amino acid transport system / permease component SSUD12_RS07460 PF11862 Domain of unknown function (DUF3382) SSUD12_RS07465 PF02653 Branched-chain amino acid transport system / permease component SSUD12_RS07470 PF13458 Periplasmic binding protein SSUD12_RS07475 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SSUD12_RS07480 PF00574 Clp protease SSUD12_RS07490 PF00128 Alpha amylase, catalytic domain SSUD12_RS07490 PF16657 Maltogenic Amylase, C-terminal domain SSUD12_RS07495 PF00128 Alpha amylase, catalytic domain SSUD12_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS07510 PF01547 Bacterial extracellular solute-binding protein SSUD12_RS07515 PF16874 Glycosyl hydrolase family 36 C-terminal domain SSUD12_RS07515 PF16875 Glycosyl hydrolase family 36 N-terminal domain SSUD12_RS07520 PF12833 Helix-turn-helix domain SSUD12_RS07520 PF02311 AraC-like ligand binding domain SSUD12_RS07525 PF00155 Aminotransferase class I and II SSUD12_RS07530 PF01053 Cys/Met metabolism PLP-dependent enzyme SSUD12_RS07550 PF05175 Methyltransferase small domain SSUD12_RS07555 PF01541 GIY-YIG catalytic domain SSUD12_RS07565 PF02525 Flavodoxin-like fold SSUD12_RS07570 PF13673 Acetyltransferase (GNAT) domain SSUD12_RS07585 PF01022 Bacterial regulatory protein, arsR family SSUD12_RS07590 PF00271 Helicase conserved C-terminal domain SSUD12_RS07590 PF00270 DEAD/DEAH box helicase SSUD12_RS07595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUD12_RS07595 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUD12_RS07600 PF08000 Bacterial PH domain SSUD12_RS07625 PF01048 Phosphorylase superfamily SSUD12_RS07635 PF00293 NUDIX domain SSUD12_RS07640 PF12804 MobA-like NTP transferase domain SSUD12_RS07640 PF00132 Bacterial transferase hexapeptide (six repeats) SSUD12_RS07640 PF14602 Hexapeptide repeat of succinyl-transferase SSUD12_RS07650 PF13302 Acetyltransferase (GNAT) domain SSUD12_RS07675 PF03551 Transcriptional regulator PadR-like family SSUD12_RS07685 PF02687 FtsX-like permease family SSUD12_RS07690 PF00005 ABC transporter SSUD12_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS07700 PF00072 Response regulator receiver domain SSUD12_RS07700 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS07710 PF00155 Aminotransferase class I and II SSUD12_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS07725 PF00005 ABC transporter SSUD12_RS07725 PF00571 CBS domain SSUD12_RS07745 PF01790 Prolipoprotein diacylglyceryl transferase SSUD12_RS07750 PF02603 HPr Serine kinase N terminus SSUD12_RS07750 PF07475 HPr Serine kinase C-terminal domain SSUD12_RS07755 PF01238 Phosphomannose isomerase type I SSUD12_RS07770 PF00398 Ribosomal RNA adenine dimethylase SSUD12_RS07775 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) SSUD12_RS07785 PF17283 SprT-like zinc ribbon domain SSUD12_RS07785 PF10263 SprT-like family SSUD12_RS07790 PF16921 Tex protein YqgF-like domain SSUD12_RS07790 PF09371 Tex-like protein N-terminal domain SSUD12_RS07790 PF00575 S1 RNA binding domain SSUD12_RS07790 PF17674 HHH domain SSUD12_RS07795 PF00248 Aldo/keto reductase family SSUD12_RS07805 PF06177 QueT transporter SSUD12_RS07810 PF04138 GtrA-like protein SSUD12_RS07820 PF00557 Metallopeptidase family M24 SSUD12_RS07830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSUD12_RS07835 PF02525 Flavodoxin-like fold SSUD12_RS07840 PF02773 S-adenosylmethionine synthetase, C-terminal domain SSUD12_RS07840 PF00438 S-adenosylmethionine synthetase, N-terminal domain SSUD12_RS07840 PF02772 S-adenosylmethionine synthetase, central domain SSUD12_RS07845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSUD12_RS07855 PF05343 M42 glutamyl aminopeptidase SSUD12_RS07870 PF12169 DNA polymerase III subunits gamma and tau domain III SSUD12_RS07875 PF13185 GAF domain SSUD12_RS07885 PF03551 Transcriptional regulator PadR-like family SSUD12_RS07885 PF10400 Virulence activator alpha C-term SSUD12_RS07890 PF00485 Phosphoribulokinase / Uridine kinase family SSUD12_RS07895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSUD12_RS07900 PF00271 Helicase conserved C-terminal domain SSUD12_RS07900 PF00270 DEAD/DEAH box helicase SSUD12_RS07905 PF01522 Polysaccharide deacetylase SSUD12_RS07905 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SSUD12_RS07915 PF00300 Histidine phosphatase superfamily (branch 1) SSUD12_RS07920 PF02803 Thiolase, C-terminal domain SSUD12_RS07920 PF00108 Thiolase, N-terminal domain SSUD12_RS07925 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SSUD12_RS07925 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SSUD12_RS07930 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SSUD12_RS07960 PF07411 Domain of unknown function (DUF1508) SSUD12_RS07995 PF00216 Bacterial DNA-binding protein SSUD12_RS08005 PF13472 GDSL-like Lipase/Acylhydrolase family SSUD12_RS08010 PF02645 Uncharacterised protein, DegV family COG1307 SSUD12_RS08015 PF13476 AAA domain SSUD12_RS08020 PF02863 Arginine repressor, C-terminal domain SSUD12_RS08020 PF01316 Arginine repressor, DNA binding domain SSUD12_RS08025 PF01479 S4 domain SSUD12_RS08025 PF01728 FtsJ-like methyltransferase SSUD12_RS08030 PF00348 Polyprenyl synthetase SSUD12_RS08035 PF02609 Exonuclease VII small subunit SSUD12_RS08040 PF02601 Exonuclease VII, large subunit SSUD12_RS08040 PF13742 OB-fold nucleic acid binding domain SSUD12_RS08045 PF04228 Putative neutral zinc metallopeptidase SSUD12_RS08050 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SSUD12_RS08055 PF13276 HTH-like domain SSUD12_RS08055 PF13333 Integrase core domain SSUD12_RS08055 PF00665 Integrase core domain SSUD12_RS08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS08065 PF00512 His Kinase A (phospho-acceptor) domain SSUD12_RS08065 PF00672 HAMP domain SSUD12_RS08070 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS08070 PF00072 Response regulator receiver domain SSUD12_RS08080 PF01610 Transposase SSUD12_RS08080 PF13683 Integrase core domain SSUD12_RS08095 PF02833 DHHA2 domain SSUD12_RS08095 PF01368 DHH family SSUD12_RS08105 PF01638 HxlR-like helix-turn-helix SSUD12_RS08110 PF02525 Flavodoxin-like fold SSUD12_RS08130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSUD12_RS08135 PF00933 Glycosyl hydrolase family 3 N terminal domain SSUD12_RS08140 PF04055 Radical SAM superfamily SSUD12_RS08145 PF01595 Cyclin M transmembrane N-terminal domain SSUD12_RS08145 PF00571 CBS domain SSUD12_RS08145 PF03471 Transporter associated domain SSUD12_RS08150 PF00005 ABC transporter SSUD12_RS08155 PF06962 Putative rRNA methylase SSUD12_RS08165 PF16916 Dimerisation domain of Zinc Transporter SSUD12_RS08165 PF01545 Cation efflux family SSUD12_RS08175 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SSUD12_RS08175 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SSUD12_RS08175 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SSUD12_RS08180 PF02540 NAD synthase SSUD12_RS08185 PF00291 Pyridoxal-phosphate dependent enzyme SSUD12_RS08190 PF01797 Transposase IS200 like SSUD12_RS08200 PF04055 Radical SAM superfamily SSUD12_RS08205 PF04055 Radical SAM superfamily SSUD12_RS08210 PF06265 Protein of unknown function (DUF1027) SSUD12_RS08215 PF13180 PDZ domain SSUD12_RS08215 PF05362 Lon protease (S16) C-terminal proteolytic domain SSUD12_RS08220 PF01467 Cytidylyltransferase-like SSUD12_RS08235 PF00581 Rhodanese-like domain SSUD12_RS08240 PF06014 Bacterial protein of unknown function (DUF910) SSUD12_RS08245 PF00072 Response regulator receiver domain SSUD12_RS08245 PF00196 Bacterial regulatory proteins, luxR family SSUD12_RS08250 PF07730 Histidine kinase SSUD12_RS08250 PF13185 GAF domain SSUD12_RS08260 PF00005 ABC transporter SSUD12_RS08265 PF00210 Ferritin-like domain SSUD12_RS08270 PF05532 CsbD-like SSUD12_RS08275 PF01451 Low molecular weight phosphotyrosine protein phosphatase SSUD12_RS08285 PF01757 Acyltransferase family SSUD12_RS08290 PF01569 PAP2 superfamily SSUD12_RS08295 PF12822 ECF transporter, substrate-specific component SSUD12_RS08300 PF00588 SpoU rRNA Methylase family SSUD12_RS08310 PF01809 Putative membrane protein insertion efficiency factor SSUD12_RS08315 PF00849 RNA pseudouridylate synthase SSUD12_RS08315 PF01479 S4 domain SSUD12_RS08320 PF04079 Segregation and condensation complex subunit ScpB SSUD12_RS08325 PF02616 Segregation and condensation protein ScpA SSUD12_RS08330 PF00589 Phage integrase family SSUD12_RS08345 PF01725 Ham1 family SSUD12_RS08350 PF01177 Asp/Glu/Hydantoin racemase SSUD12_RS08355 PF03672 Uncharacterised protein family (UPF0154) SSUD12_RS08360 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SSUD12_RS08360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SSUD12_RS08365 PF03051 Peptidase C1-like family SSUD12_RS08370 PF01027 Inhibitor of apoptosis-promoting Bax1 SSUD12_RS08380 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSUD12_RS08380 PF00588 SpoU rRNA Methylase family SSUD12_RS08385 PF00708 Acylphosphatase SSUD12_RS08390 PF02096 60Kd inner membrane protein SSUD12_RS08395 PF01272 Transcription elongation factor, GreA/GreB, C-term SSUD12_RS08395 PF03449 Transcription elongation factor, N-terminal SSUD12_RS08400 PF02618 YceG-like family SSUD12_RS08410 PF08245 Mur ligase middle domain SSUD12_RS08410 PF02875 Mur ligase family, glutamate ligase domain SSUD12_RS08410 PF01225 Mur ligase family, catalytic domain SSUD12_RS08420 PF00271 Helicase conserved C-terminal domain SSUD12_RS08420 PF00176 SNF2 family N-terminal domain SSUD12_RS08420 PF04434 SWIM zinc finger SSUD12_RS08435 PF01926 50S ribosome-binding GTPase SSUD12_RS08435 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SSUD12_RS08440 PF00881 Nitroreductase family SSUD12_RS08445 PF07319 Primosomal protein DnaI N-terminus SSUD12_RS08445 PF01695 IstB-like ATP binding protein SSUD12_RS08455 PF03477 ATP cone domain SSUD12_RS08460 PF01594 AI-2E family transporter SSUD12_RS08465 PF00072 Response regulator receiver domain SSUD12_RS08465 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS08470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SSUD12_RS08470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SSUD12_RS08480 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS08490 PF00271 Helicase conserved C-terminal domain SSUD12_RS08490 PF00270 DEAD/DEAH box helicase SSUD12_RS08505 PF00953 Glycosyl transferase family 4 SSUD12_RS08505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SSUD12_RS08510 PF03793 PASTA domain SSUD12_RS08510 PF03717 Penicillin-binding Protein dimerisation domain SSUD12_RS08510 PF00905 Penicillin binding protein transpeptidase domain SSUD12_RS08520 PF01795 MraW methylase family SSUD12_RS08560 PF02424 ApbE family SSUD12_RS08565 PF04205 FMN-binding domain SSUD12_RS08570 PF00348 Polyprenyl synthetase SSUD12_RS08575 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS08590 PF02386 Cation transport protein SSUD12_RS08595 PF02254 TrkA-N domain SSUD12_RS08595 PF02080 TrkA-C domain SSUD12_RS08600 PF01554 MatE SSUD12_RS08610 PF05979 Bacterial protein of unknown function (DUF896) SSUD12_RS08620 PF02092 Glycyl-tRNA synthetase beta subunit SSUD12_RS08625 PF02091 Glycyl-tRNA synthetase alpha subunit SSUD12_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS08645 PF09383 NIL domain SSUD12_RS08645 PF00005 ABC transporter SSUD12_RS08650 PF07687 Peptidase dimerisation domain SSUD12_RS08650 PF01546 Peptidase family M20/M25/M40 SSUD12_RS08655 PF03180 NLPA lipoprotein SSUD12_RS08660 PF07722 Peptidase C26 SSUD12_RS08675 PF01717 Cobalamin-independent synthase, Catalytic domain SSUD12_RS08675 PF08267 Cobalamin-independent synthase, N-terminal domain SSUD12_RS08680 PF02219 Methylenetetrahydrofolate reductase SSUD12_RS08685 PF00860 Permease family SSUD12_RS08695 PF03610 PTS system fructose IIA component SSUD12_RS08695 PF03830 PTS system sorbose subfamily IIB component SSUD12_RS08700 PF03609 PTS system sorbose-specific iic component SSUD12_RS08705 PF03613 PTS system mannose/fructose/sorbose family IID component SSUD12_RS08715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUD12_RS08715 PF02403 Seryl-tRNA synthetase N-terminal domain SSUD12_RS08725 PF02517 CPBP intramembrane metalloprotease SSUD12_RS08735 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SSUD12_RS08740 PF01039 Carboxyl transferase domain SSUD12_RS08745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSUD12_RS08745 PF00289 Biotin carboxylase, N-terminal domain SSUD12_RS08745 PF02785 Biotin carboxylase C-terminal domain SSUD12_RS08750 PF07977 FabA-like domain SSUD12_RS08755 PF00364 Biotin-requiring enzyme SSUD12_RS08760 PF02801 Beta-ketoacyl synthase, C-terminal domain SSUD12_RS08760 PF00109 Beta-ketoacyl synthase, N-terminal domain SSUD12_RS08770 PF00698 Acyl transferase domain SSUD12_RS08775 PF03060 Nitronate monooxygenase SSUD12_RS08780 PF00550 Phosphopantetheine attachment site SSUD12_RS08785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SSUD12_RS08785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SSUD12_RS08795 PF00378 Enoyl-CoA hydratase/isomerase SSUD12_RS08800 PF13419 Haloacid dehalogenase-like hydrolase SSUD12_RS08805 PF13840 ACT domain SSUD12_RS08805 PF00696 Amino acid kinase family SSUD12_RS08815 PF01168 Alanine racemase, N-terminal domain SSUD12_RS08815 PF00842 Alanine racemase, C-terminal domain SSUD12_RS08820 PF01648 4'-phosphopantetheinyl transferase superfamily SSUD12_RS08825 PF01043 SecA preprotein cross-linking domain SSUD12_RS08825 PF02810 SEC-C motif SSUD12_RS08825 PF07517 SecA DEAD-like domain SSUD12_RS08825 PF07516 SecA Wing and Scaffold domain SSUD12_RS08835 PF00480 ROK family SSUD12_RS08840 PF00367 phosphotransferase system, EIIB SSUD12_RS08840 PF02378 Phosphotransferase system, EIIC SSUD12_RS08840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUD12_RS08845 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSUD12_RS08845 PF08244 Glycosyl hydrolases family 32 C terminal SSUD12_RS08850 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS08855 PF01029 NusB family SSUD12_RS08860 PF03780 Asp23 family, cell envelope-related function SSUD12_RS08865 PF09285 Elongation factor P, C-terminal SSUD12_RS08865 PF08207 Elongation factor P (EF-P) KOW-like domain SSUD12_RS08865 PF01132 Elongation factor P (EF-P) OB domain SSUD12_RS08870 PF01321 Creatinase/Prolidase N-terminal domain SSUD12_RS08870 PF00557 Metallopeptidase family M24 SSUD12_RS08895 PF17760 UvrA interaction domain SSUD12_RS08895 PF17755 UvrA DNA-binding domain SSUD12_RS08895 PF00005 ABC transporter SSUD12_RS08915 PF01084 Ribosomal protein S18 SSUD12_RS08920 PF00436 Single-strand binding protein family SSUD12_RS08925 PF01250 Ribosomal protein S6 SSUD12_RS08930 PF03099 Biotin/lipoate A/B protein ligase family SSUD12_RS08930 PF10437 Bacterial lipoate protein ligase C-terminus SSUD12_RS08935 PF00232 Glycosyl hydrolase family 1 SSUD12_RS08940 PF00300 Histidine phosphatase superfamily (branch 1) SSUD12_RS08945 PF00300 Histidine phosphatase superfamily (branch 1) SSUD12_RS08950 PF00232 Glycosyl hydrolase family 1 SSUD12_RS08955 PF00232 Glycosyl hydrolase family 1 SSUD12_RS08960 PF12833 Helix-turn-helix domain SSUD12_RS08960 PF02311 AraC-like ligand binding domain SSUD12_RS08970 PF00367 phosphotransferase system, EIIB SSUD12_RS08970 PF02378 Phosphotransferase system, EIIC SSUD12_RS08970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSUD12_RS08975 PF00874 PRD domain SSUD12_RS08975 PF03123 CAT RNA binding domain SSUD12_RS08985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSUD12_RS08985 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS08990 PF02817 e3 binding domain SSUD12_RS08990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SSUD12_RS08990 PF00364 Biotin-requiring enzyme SSUD12_RS08995 PF02780 Transketolase, C-terminal domain SSUD12_RS08995 PF02779 Transketolase, pyrimidine binding domain SSUD12_RS08995 PF00364 Biotin-requiring enzyme SSUD12_RS09000 PF00676 Dehydrogenase E1 component SSUD12_RS09005 PF03458 UPF0126 domain SSUD12_RS09010 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 SSUD12_RS09020 PF02033 Ribosome-binding factor A SSUD12_RS09025 PF04760 Translation initiation factor IF-2, N-terminal region SSUD12_RS09025 PF11987 Translation-initiation factor 2 SSUD12_RS09025 PF00009 Elongation factor Tu GTP binding domain SSUD12_RS09030 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SSUD12_RS09035 PF04296 Protein of unknown function (DUF448) SSUD12_RS09040 PF13184 NusA-like KH domain SSUD12_RS09040 PF00575 S1 RNA binding domain SSUD12_RS09040 PF08529 NusA N-terminal domain SSUD12_RS09045 PF17384 RimP C-terminal SH3 domain SSUD12_RS09045 PF02576 RimP N-terminal domain SSUD12_RS09050 PF02390 Putative methyltransferase SSUD12_RS09060 PF05975 Bacterial ABC transporter protein EcsB SSUD12_RS09065 PF00005 ABC transporter SSUD12_RS09070 PF01230 HIT domain SSUD12_RS09080 PF03816 Cell envelope-related transcriptional attenuator domain SSUD12_RS09090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SSUD12_RS09095 PF13684 Dihydroxyacetone kinase family SSUD12_RS09095 PF02734 DAK2 domain SSUD12_RS09100 PF03780 Asp23 family, cell envelope-related function SSUD12_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS09110 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS09115 PF00005 ABC transporter SSUD12_RS09115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSUD12_RS09120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSUD12_RS09120 PF00005 ABC transporter SSUD12_RS09125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SSUD12_RS09130 PF00768 D-alanyl-D-alanine carboxypeptidase SSUD12_RS09130 PF07943 Penicillin-binding protein 5, C-terminal domain SSUD12_RS09135 PF01458 Uncharacterized protein family (UPF0051) SSUD12_RS09140 PF01592 NifU-like N terminal domain SSUD12_RS09145 PF00266 Aminotransferase class-V SSUD12_RS09150 PF01458 Uncharacterized protein family (UPF0051) SSUD12_RS09155 PF00005 ABC transporter SSUD12_RS09160 PF00953 Glycosyl transferase family 4 SSUD12_RS09165 PF05389 Negative regulator of genetic competence (MecA) SSUD12_RS09170 PF02673 Bacitracin resistance protein BacA SSUD12_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS09180 PF00005 ABC transporter SSUD12_RS09195 PF00291 Pyridoxal-phosphate dependent enzyme SSUD12_RS09195 PF00585 C-terminal regulatory domain of Threonine dehydratase SSUD12_RS09200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SSUD12_RS09200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SSUD12_RS09205 PF10369 Small subunit of acetolactate synthase SSUD12_RS09205 PF01842 ACT domain SSUD12_RS09210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SSUD12_RS09210 PF00205 Thiamine pyrophosphate enzyme, central domain SSUD12_RS09210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SSUD12_RS09215 PF00535 Glycosyl transferase family 2 SSUD12_RS09230 PF00920 Dehydratase family SSUD12_RS09235 PF01501 Glycosyl transferase family 8 SSUD12_RS09245 PF01883 Iron-sulfur cluster assembly protein SSUD12_RS09260 PF00380 Ribosomal protein S9/S16 SSUD12_RS09265 PF00572 Ribosomal protein L13 SSUD12_RS09270 PF02645 Uncharacterised protein, DegV family COG1307 SSUD12_RS09280 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSUD12_RS09280 PF00588 SpoU rRNA Methylase family SSUD12_RS09305 PF03459 TOBE domain SSUD12_RS09305 PF17912 MalK OB fold domain SSUD12_RS09305 PF00005 ABC transporter SSUD12_RS09310 PF13556 PucR C-terminal helix-turn-helix domain SSUD12_RS09315 PF00072 Response regulator receiver domain SSUD12_RS09315 PF12833 Helix-turn-helix domain SSUD12_RS09320 PF06580 Histidine kinase SSUD12_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS09320 PF02743 Cache domain SSUD12_RS09320 PF00672 HAMP domain SSUD12_RS09330 PF12010 Domain of unknown function (DUF3502) SSUD12_RS09335 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS09340 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS09350 PF00480 ROK family SSUD12_RS09355 PF09261 Alpha mannosidase middle domain SSUD12_RS09355 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SSUD12_RS09355 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SSUD12_RS09355 PF07748 Glycosyl hydrolases family 38 C-terminal domain SSUD12_RS09355 PF01074 Glycosyl hydrolases family 38 N-terminal domain SSUD12_RS09375 PF00636 Ribonuclease III domain SSUD12_RS09380 PF01406 tRNA synthetases class I (C) catalytic domain SSUD12_RS09380 PF09190 DALR domain SSUD12_RS09395 PF06426 Serine acetyltransferase, N-terminal SSUD12_RS09395 PF00132 Bacterial transferase hexapeptide (six repeats) SSUD12_RS09400 PF00013 KH domain SSUD12_RS09400 PF03725 3' exoribonuclease family, domain 2 SSUD12_RS09400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SSUD12_RS09400 PF01138 3' exoribonuclease family, domain 1 SSUD12_RS09400 PF00575 S1 RNA binding domain SSUD12_RS09405 PF00312 Ribosomal protein S15 SSUD12_RS09410 PF00860 Permease family SSUD12_RS09435 PF00860 Permease family SSUD12_RS09440 PF00156 Phosphoribosyl transferase domain SSUD12_RS09445 PF01479 S4 domain SSUD12_RS09445 PF00849 RNA pseudouridylate synthase SSUD12_RS09460 PF01327 Polypeptide deformylase SSUD12_RS09470 PF00694 Aconitase C-terminal domain SSUD12_RS09475 PF00330 Aconitase family (aconitate hydratase) SSUD12_RS09480 PF00180 Isocitrate/isopropylmalate dehydrogenase SSUD12_RS09485 PF00682 HMGL-like SSUD12_RS09485 PF08502 LeuA allosteric (dimerisation) domain SSUD12_RS09500 PF02073 Thermophilic metalloprotease (M29) SSUD12_RS09510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SSUD12_RS09510 PF00929 Exonuclease SSUD12_RS09510 PF02811 PHP domain SSUD12_RS09510 PF11490 DNA polymerase III polC-type N-terminus II SSUD12_RS09510 PF07733 Bacterial DNA polymerase III alpha NTPase domain SSUD12_RS09510 PF14480 DNA polymerase III polC-type N-terminus I SSUD12_RS09515 PF02733 Dak1 domain SSUD12_RS09525 PF02733 Dak1 domain SSUD12_RS09530 PF02734 DAK2 domain SSUD12_RS09535 PF03610 PTS system fructose IIA component SSUD12_RS09540 PF00230 Major intrinsic protein SSUD12_RS09545 PF04073 Aminoacyl-tRNA editing domain SSUD12_RS09545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSUD12_RS09545 PF03129 Anticodon binding domain SSUD12_RS09550 PF13180 PDZ domain SSUD12_RS09550 PF02163 Peptidase family M50 SSUD12_RS09560 PF01255 Putative undecaprenyl diphosphate synthase SSUD12_RS09565 PF02699 Preprotein translocase subunit SSUD12_RS09570 PF00709 Adenylosuccinate synthetase SSUD12_RS09575 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSUD12_RS09575 PF04262 Glutamate-cysteine ligase SSUD12_RS09575 PF18419 ATP-grasp-like domain SSUD12_RS09585 PF01430 Hsp33 protein SSUD12_RS09590 PF01207 Dihydrouridine synthase (Dus) SSUD12_RS09595 PF01467 Cytidylyltransferase-like SSUD12_RS09600 PF00004 ATPase family associated with various cellular activities (AAA) SSUD12_RS09600 PF07724 AAA domain (Cdc48 subfamily) SSUD12_RS09600 PF17871 AAA lid domain SSUD12_RS09600 PF02861 Clp amino terminal domain, pathogenicity island component SSUD12_RS09600 PF10431 C-terminal, D2-small domain, of ClpB protein SSUD12_RS09605 PF17727 CtsR C-terminal dimerization domain SSUD12_RS09605 PF05848 CtsR N-terminal HTH domain SSUD12_RS09620 PF00889 Elongation factor TS SSUD12_RS09625 PF00318 Ribosomal protein S2 SSUD12_RS09640 PF06280 Fn3-like domain SSUD12_RS09640 PF00746 LPXTG cell wall anchor motif SSUD12_RS09640 PF02225 PA domain SSUD12_RS09640 PF00082 Subtilase family SSUD12_RS09645 PF00467 KOW motif SSUD12_RS09645 PF02357 Transcription termination factor nusG SSUD12_RS09655 PF00471 Ribosomal protein L33 SSUD12_RS09660 PF00905 Penicillin binding protein transpeptidase domain SSUD12_RS09660 PF00912 Transglycosylase SSUD12_RS09665 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSUD12_RS09670 PF00849 RNA pseudouridylate synthase SSUD12_RS09670 PF01479 S4 domain SSUD12_RS09685 PF01580 FtsK/SpoIIIE family SSUD12_RS09685 PF12538 DNA transporter SSUD12_RS09690 PF10140 WXG100 protein secretion system (Wss), protein YukC SSUD12_RS09710 PF06013 Proteins of 100 residues with WXG SSUD12_RS09715 PF09182 Bacterial purine repressor, N-terminal SSUD12_RS09715 PF00156 Phosphoribosyl transferase domain SSUD12_RS09725 PF01336 OB-fold nucleic acid binding domain SSUD12_RS09725 PF01966 HD domain SSUD12_RS09730 PF02646 RmuC family SSUD12_RS09735 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SSUD12_RS09735 PF04263 Thiamin pyrophosphokinase, catalytic domain SSUD12_RS09740 PF00834 Ribulose-phosphate 3 epimerase family SSUD12_RS09745 PF03193 RsgA GTPase SSUD12_RS09745 PF16745 RsgA N-terminal domain SSUD12_RS09755 PF00005 ABC transporter SSUD12_RS09755 PF12857 TOBE-like domain SSUD12_RS09760 PF00005 ABC transporter SSUD12_RS09760 PF00664 ABC transporter transmembrane region SSUD12_RS09780 PF00398 Ribosomal RNA adenine dimethylase SSUD12_RS09810 PF13331 Domain of unknown function (DUF4093) SSUD12_RS09815 PF01026 TatD related DNase SSUD12_RS09820 PF00468 Ribosomal protein L34 SSUD12_RS09825 PF01424 R3H domain SSUD12_RS09825 PF14804 Jag N-terminus SSUD12_RS09830 PF02096 60Kd inner membrane protein SSUD12_RS09835 PF00825 Ribonuclease P SSUD12_RS09840 PF14698 Argininosuccinate lyase C-terminal SSUD12_RS09840 PF00206 Lyase SSUD12_RS09845 PF00764 Arginosuccinate synthase SSUD12_RS09855 PF02829 3H domain SSUD12_RS09855 PF08279 HTH domain SSUD12_RS09870 PF02574 Homocysteine S-methyltransferase SSUD12_RS09875 PF00324 Amino acid permease SSUD12_RS09880 PF00749 tRNA synthetases class I (E and Q), catalytic domain SSUD12_RS09900 PF01987 Mitochondrial biogenesis AIM24 SSUD12_RS09905 PF00484 Carbonic anhydrase SSUD12_RS09910 PF18073 Rubredoxin metal binding domain SSUD12_RS09920 PF00692 dUTPase SSUD12_RS09945 PF00005 ABC transporter SSUD12_RS09945 PF02687 FtsX-like permease family SSUD12_RS09945 PF12704 MacB-like periplasmic core domain SSUD12_RS09950 PF00005 ABC transporter SSUD12_RS09950 PF00664 ABC transporter transmembrane region SSUD12_RS09955 PF00664 ABC transporter transmembrane region SSUD12_RS09955 PF00005 ABC transporter SSUD12_RS09965 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SSUD12_RS09965 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SSUD12_RS09970 PF00483 Nucleotidyl transferase SSUD12_RS09975 PF01694 Rhomboid family SSUD12_RS09980 PF01812 5-formyltetrahydrofolate cyclo-ligase family SSUD12_RS09985 PF01546 Peptidase family M20/M25/M40 SSUD12_RS09985 PF07687 Peptidase dimerisation domain SSUD12_RS09990 PF14602 Hexapeptide repeat of succinyl-transferase SSUD12_RS09990 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SSUD12_RS09990 PF00132 Bacterial transferase hexapeptide (six repeats) SSUD12_RS10000 PF00149 Calcineurin-like phosphoesterase SSUD12_RS10005 PF00342 Phosphoglucose isomerase SSUD12_RS10015 PF14437 MafB19-like deaminase SSUD12_RS10020 PF02779 Transketolase, pyrimidine binding domain SSUD12_RS10020 PF02780 Transketolase, C-terminal domain SSUD12_RS10020 PF00456 Transketolase, thiamine diphosphate binding domain SSUD12_RS10040 PF00596 Class II Aldolase and Adducin N-terminal domain SSUD12_RS10045 PF01261 Xylose isomerase-like TIM barrel SSUD12_RS10050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSUD12_RS10055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUD12_RS10060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS10065 PF03611 PTS system sugar-specific permease component SSUD12_RS10070 PF17999 Pullulanase N1-terminal domain SSUD12_RS10070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUD12_RS10070 PF00128 Alpha amylase, catalytic domain SSUD12_RS10085 PF00535 Glycosyl transferase family 2 SSUD12_RS10090 PF05738 Cna protein B-type domain SSUD12_RS10090 PF05737 Collagen binding domain SSUD12_RS10090 PF17802 Prealbumin-like fold domain SSUD12_RS10105 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS10110 PF00005 ABC transporter SSUD12_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS10120 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS10125 PF05257 CHAP domain SSUD12_RS10125 PF01476 LysM domain SSUD12_RS10130 PF02378 Phosphotransferase system, EIIC SSUD12_RS10140 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSUD12_RS10145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSUD12_RS10150 PF08279 HTH domain SSUD12_RS10150 PF05043 Mga helix-turn-helix domain SSUD12_RS10150 PF00874 PRD domain SSUD12_RS10150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSUD12_RS10160 PF00232 Glycosyl hydrolase family 1 SSUD12_RS10165 PF02056 Family 4 glycosyl hydrolase SSUD12_RS10165 PF11975 Family 4 glycosyl hydrolase C-terminal domain SSUD12_RS10170 PF13603 Leucyl-tRNA synthetase, Domain 2 SSUD12_RS10170 PF09334 tRNA synthetases class I (M) SSUD12_RS10170 PF00133 tRNA synthetases class I (I, L, M and V) SSUD12_RS10170 PF08264 Anticodon-binding domain of tRNA SSUD12_RS10175 PF01734 Patatin-like phospholipase SSUD12_RS10180 PF05649 Peptidase family M13 SSUD12_RS10180 PF01431 Peptidase family M13 SSUD12_RS10185 PF00950 ABC 3 transport family SSUD12_RS10190 PF00950 ABC 3 transport family SSUD12_RS10195 PF00005 ABC transporter SSUD12_RS10205 PF01297 Zinc-uptake complex component A periplasmic SSUD12_RS10230 PF02580 D-Tyr-tRNA(Tyr) deacylase SSUD12_RS10235 PF02824 TGS domain SSUD12_RS10235 PF13291 ACT domain SSUD12_RS10235 PF04607 Region found in RelA / SpoT proteins SSUD12_RS10240 PF02872 5'-nucleotidase, C-terminal domain SSUD12_RS10240 PF00149 Calcineurin-like phosphoesterase SSUD12_RS10255 PF04452 RNA methyltransferase SSUD12_RS10280 PF05496 Holliday junction DNA helicase RuvB P-loop domain SSUD12_RS10280 PF12002 MgsA AAA+ ATPase C terminal SSUD12_RS10280 PF16193 AAA C-terminal domain SSUD12_RS10305 PF02872 5'-nucleotidase, C-terminal domain SSUD12_RS10305 PF00149 Calcineurin-like phosphoesterase SSUD12_RS10315 PF13597 Anaerobic ribonucleoside-triphosphate reductase SSUD12_RS10315 PF03477 ATP cone domain SSUD12_RS10320 PF00005 ABC transporter SSUD12_RS10325 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS10330 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSUD12_RS10335 PF07722 Peptidase C26 SSUD12_RS10345 PF00488 MutS domain V SSUD12_RS10345 PF05190 MutS family domain IV SSUD12_RS10345 PF05192 MutS domain III SSUD12_RS10345 PF01624 MutS domain I SSUD12_RS10345 PF05188 MutS domain II SSUD12_RS10350 PF02863 Arginine repressor, C-terminal domain SSUD12_RS10350 PF01316 Arginine repressor, DNA binding domain SSUD12_RS10355 PF03485 Arginyl tRNA synthetase N terminal domain SSUD12_RS10355 PF05746 DALR anticodon binding domain SSUD12_RS10355 PF00750 tRNA synthetases class I (R) SSUD12_RS10375 PF02446 4-alpha-glucanotransferase SSUD12_RS10380 PF13416 Bacterial extracellular solute-binding protein SSUD12_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS10390 PF00528 Binding-protein-dependent transport system inner membrane component SSUD12_RS10400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SSUD12_RS10400 PF00356 Bacterial regulatory proteins, lacI family SSUD12_RS10405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSUD12_RS10405 PF17999 Pullulanase N1-terminal domain SSUD12_RS10405 PF00128 Alpha amylase, catalytic domain SSUD12_RS10410 PF07972 NrdI Flavodoxin like SSUD12_RS10415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUD12_RS10415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUD12_RS10420 PF00152 tRNA synthetases class II (D, K and N) SSUD12_RS10420 PF01336 OB-fold nucleic acid binding domain SSUD12_RS10420 PF02938 GAD domain SSUD12_RS10425 PF13673 Acetyltransferase (GNAT) domain SSUD12_RS10430 PF00248 Aldo/keto reductase family SSUD12_RS10435 PF00535 Glycosyl transferase family 2 SSUD12_RS10445 PF14537 Cytochrome c3 SSUD12_RS10445 PF00890 FAD binding domain SSUD12_RS10455 PF01479 S4 domain SSUD12_RS10455 PF00163 Ribosomal protein S4/S9 N-terminal domain SSUD12_RS10470 PF00772 DnaB-like helicase N terminal domain SSUD12_RS10470 PF03796 DnaB-like helicase C terminal domain SSUD12_RS10475 PF03948 Ribosomal protein L9, C-terminal domain SSUD12_RS10475 PF01281 Ribosomal protein L9, N-terminal domain SSUD12_RS10485 PF13932 GidA associated domain SSUD12_RS10485 PF01134 Glucose inhibited division protein A SSUD12_RS10495 PF00293 NUDIX domain SSUD12_RS10500 PF00293 NUDIX domain SSUD12_RS10505 PF01638 HxlR-like helix-turn-helix SSUD12_RS10520 PF03315 Serine dehydratase beta chain SSUD12_RS10520 PF01842 ACT domain SSUD12_RS10525 PF03313 Serine dehydratase alpha chain SSUD12_RS10535 PF00486 Transcriptional regulatory protein, C terminal SSUD12_RS10535 PF00072 Response regulator receiver domain SSUD12_RS10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSUD12_RS10540 PF00512 His Kinase A (phospho-acceptor) domain SSUD12_RS10540 PF00672 HAMP domain SSUD12_RS10550 PF02361 Cobalt transport protein SSUD12_RS10555 PF00005 ABC transporter SSUD12_RS10560 PF00005 ABC transporter SSUD12_RS10565 PF01066 CDP-alcohol phosphatidyltransferase SSUD12_RS10570 PF13464 Domain of unknown function (DUF4115) SSUD12_RS10575 PF00675 Insulinase (Peptidase family M16) SSUD12_RS10575 PF05193 Peptidase M16 inactive domain SSUD12_RS10580 PF05193 Peptidase M16 inactive domain SSUD12_RS10650 PF00589 Phage integrase family SSUD12_RS10650 PF14659 Phage integrase, N-terminal SAM-like domain SSUD12_RS10660 PF02463 RecF/RecN/SMC N terminal domain SSUD12_RS10665 PF00478 IMP dehydrogenase / GMP reductase domain SSUD12_RS10665 PF00571 CBS domain SSUD12_RS10670 PF00579 tRNA synthetases class I (W and Y) SSUD12_RS10675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSUD12_RS10675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SSUD12_RS10680 PF12848 ABC transporter SSUD12_RS10680 PF00005 ABC transporter SSUD12_RS10755 PF02590 Predicted SPOUT methyltransferase SSUD12_RS10760 PF13180 PDZ domain SSUD12_RS10765 PF02195 ParB-like nuclease domain SSUD12_RS10765 PF17762 HTH domain found in ParB protein SSUD12_RS10800 PF12892 Spy0128-like isopeptide containing domain SSUD12_RS10805 PF12848 ABC transporter SSUD12_RS10805 PF00005 ABC transporter SSUD12_RS10810 PF00005 ABC transporter SSUD12_RS10810 PF12848 ABC transporter SSUD12_RS10825 PF06458 MucBP domain SSUD12_RS10825 PF04650 YSIRK type signal peptide SSUD12_RS10825 PF00746 LPXTG cell wall anchor motif SSUD12_RS10835 PF03432 Relaxase/Mobilisation nuclease domain SSUD12_RS10845 PF01610 Transposase SSUD12_RS10845 PF13683 Integrase core domain