locus-tag	class	description
SSUD9_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
SSUD9_RS00010	COG0592	DNA-directed DNA polymerase activity
SSUD9_RS00030	COG0012	GTP binding
SSUD9_RS00035	COG0193	aminoacyl-tRNA hydrolase activity
SSUD9_RS00040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SSUD9_RS00045	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SSUD9_RS00065	COG0037	tRNA processing
SSUD9_RS00075	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SSUD9_RS00185	COG1792	Involved in formation and maintenance of cell shape
SSUD9_RS00200	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SSUD9_RS00205	COG0436	Aminotransferase
SSUD9_RS00210	COG1381	Involved in DNA repair and RecF pathway recombination
SSUD9_RS00215	COG0416	fatty acid biosynthetic process
SSUD9_RS00220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SSUD9_RS00230	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SSUD9_RS00245	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SSUD9_RS00250	COG0138	bifunctional purine biosynthesis protein purh
SSUD9_RS00275	COG0151	Belongs to the GarS family
SSUD9_RS00280	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SSUD9_RS00295	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SSUD9_RS00325	COG1131	(ABC) transporter
SSUD9_RS00335	COG1132	(ABC) transporter
SSUD9_RS00340	COG2255	four-way junction helicase activity
SSUD9_RS00350	COG0546	phosphoglycolate phosphatase activity
SSUD9_RS00365	COG0285	dihydrofolate synthase activity
SSUD9_RS00380	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
SSUD9_RS00385	COG0632	four-way junction helicase activity
SSUD9_RS00390	COG2818	Glycosylase
SSUD9_RS00400	COG0519	Catalyzes the synthesis of GMP from XMP
SSUD9_RS00415	COG1393	Belongs to the ArsC family
SSUD9_RS00420	COG4472	Bacterial protein of unknown function (DUF965)
SSUD9_RS00425	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
SSUD9_RS00430	COG3906	Belongs to the UPF0473 family
SSUD9_RS00445	COG0051	transcription antitermination factor activity, RNA binding
SSUD9_RS00450	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SSUD9_RS00455	COG0088	Forms part of the polypeptide exit tunnel
SSUD9_RS00460	COG0089	rRNA binding
SSUD9_RS00465	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SSUD9_RS00470	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
SSUD9_RS00475	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
SSUD9_RS00480	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SSUD9_RS00485	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
SSUD9_RS00490	COG0255	Belongs to the universal ribosomal protein uL29 family
SSUD9_RS00495	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
SSUD9_RS00500	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SSUD9_RS00505	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
SSUD9_RS00510	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SSUD9_RS00515	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
SSUD9_RS00525	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SSUD9_RS00535	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SSUD9_RS00540	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
SSUD9_RS00545	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
SSUD9_RS00550	COG1841	ribosomal large subunit assembly
SSUD9_RS00560	COG0201	protein transport
SSUD9_RS00565	COG0563	adenylate kinase activity
SSUD9_RS00570	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
SSUD9_RS00575	COG0257	Belongs to the bacterial ribosomal protein bL36 family
SSUD9_RS00580	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SSUD9_RS00590	COG0202	RNA polymerase activity
SSUD9_RS00705	COG2946	Replication initiation factor
SSUD9_RS00745	COG1121	(ABC) transporter
SSUD9_RS00750	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUD9_RS00755	COG3443	Belongs to the bacterial solute-binding protein 9 family
SSUD9_RS00755	COG0803	Belongs to the bacterial solute-binding protein 9 family
SSUD9_RS00780	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUD9_RS00785	COG0085	RNA polymerase activity
SSUD9_RS00790	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SSUD9_RS00800	COG1619	proteins homologs of microcin C7 resistance protein MccF
SSUD9_RS00805	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SSUD9_RS00810	COG1459	type II secretion system
SSUD9_RS00815	COG4537	Required for transformation and DNA binding
SSUD9_RS00845	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SSUD9_RS00855	COG0285	dihydrofolate synthase activity
SSUD9_RS00860	COG1363	Peptidase, m42
SSUD9_RS00870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SSUD9_RS00880	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUD9_RS00905	COG0459	protein refolding
SSUD9_RS00915	COG0049	tRNA binding
SSUD9_RS00920	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SSUD9_RS00925	COG3590	peptidase
SSUD9_RS00935	COG0126	phosphoglycerate kinase activity
SSUD9_RS00945	COG0789	Transcriptional regulator
SSUD9_RS00950	COG0174	glutamine synthetase
SSUD9_RS00965	COG1214	PFAM Peptidase M22, glycoprotease
SSUD9_RS00975	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
SSUD9_RS00980	COG2207	Transcriptional regulator
SSUD9_RS00990	COG1175	transmembrane transport
SSUD9_RS00995	COG0395	ABC-type sugar transport system, permease component
SSUD9_RS01015	COG2855	membrane
SSUD9_RS01025	COG1131	(ABC) transporter
SSUD9_RS01035	COG2081	HI0933 family
SSUD9_RS01040	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS01050	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUD9_RS01065	COG3959	Transketolase, thiamine diphosphate binding domain
SSUD9_RS01070	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
SSUD9_RS01075	COG0584	glycerophosphoryl diester phosphodiesterase
SSUD9_RS01080	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
SSUD9_RS01085	COG2222	sugar isomerase
SSUD9_RS01125	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SSUD9_RS01130	COG1882	Formate acetyltransferase
SSUD9_RS01145	COG2910	NAD(P)H-binding
SSUD9_RS01170	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS01205	COG0363	glucosamine-6-phosphate deaminase activity
SSUD9_RS01210	COG2217	Heavy metal translocating P-type atpase
SSUD9_RS01220	COG2217	Heavy metal translocating P-type atpase
SSUD9_RS01225	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SSUD9_RS01230	COG0681	Belongs to the peptidase S26 family
SSUD9_RS01250	COG0366	Alpha amylase catalytic
SSUD9_RS01255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS01255	COG1263	PTS System
SSUD9_RS01265	COG2188	Transcriptional regulator
SSUD9_RS01280	COG1193	negative regulation of DNA recombination
SSUD9_RS01330	COG3118	belongs to the thioredoxin family
SSUD9_RS01340	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SSUD9_RS01340	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SSUD9_RS01425	COG0668	transmembrane transport
SSUD9_RS01440	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SSUD9_RS01445	COG0167	dihydroorotate dehydrogenase activity
SSUD9_RS01450	COG2843	Capsule synthesis protein
SSUD9_RS01455	COG0561	phosphatase activity
SSUD9_RS01470	COG1131	(ABC) transporter
SSUD9_RS01475	COG1309	transcriptional regulator
SSUD9_RS01480	COG1511	domain protein
SSUD9_RS01500	COG1380	Effector of murein hydrolase LrgA
SSUD9_RS01505	COG1346	cytolysis
SSUD9_RS01510	COG2116	formate transmembrane transporter activity
SSUD9_RS01515	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SSUD9_RS01520	COG0433	COG0433 Predicted ATPase
SSUD9_RS01525	COG0494	nUDIX hydrolase
SSUD9_RS01550	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUD9_RS01555	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SSUD9_RS01565	COG0124	histidyl-tRNA synthetase
SSUD9_RS01575	COG1064	alcohol dehydrogenase
SSUD9_RS01580	COG1012	belongs to the aldehyde dehydrogenase family
SSUD9_RS01580	COG1454	alcohol dehydrogenase
SSUD9_RS01600	COG1132	(ABC) transporter
SSUD9_RS01615	COG1129	ABC transporter
SSUD9_RS01625	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SSUD9_RS01640	COG1304	FMN binding
SSUD9_RS01645	COG1132	(ABC) transporter
SSUD9_RS01650	COG1132	(ABC) transporter
SSUD9_RS01655	COG3830	Belongs to the UPF0237 family
SSUD9_RS01660	COG2848	UPF0210 protein
SSUD9_RS01665	COG0588	phosphoglycerate mutase activity
SSUD9_RS01670	COG1420	regulation of RNA biosynthetic process
SSUD9_RS01675	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
SSUD9_RS01680	COG0443	Heat shock 70 kDa protein
SSUD9_RS01685	COG0484	heat shock protein binding
SSUD9_RS01690	COG0095	Lipoate-protein ligase
SSUD9_RS01700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS01705	COG0765	amino acid transport
SSUD9_RS01720	COG3655	Transcriptional regulator
SSUD9_RS01730	COG2217	Heavy metal translocating P-type atpase
SSUD9_RS01755	COG4475	Protein of unknown function (DUF436)
SSUD9_RS01780	COG4221	oxidoreductase activity
SSUD9_RS01785	COG1902	pentaerythritol trinitrate reductase activity
SSUD9_RS01785	COG0446	pyridine nucleotide-disulphide oxidoreductase
SSUD9_RS01805	COG0544	peptidyl-prolyl cis-trans isomerase activity
SSUD9_RS01830	COG2801	Transposase and inactivated derivatives
SSUD9_RS01845	COG3343	RNA polymerase activity
SSUD9_RS01850	COG0504	CTP synthase activity
SSUD9_RS01860	COG0191	fructose-bisphosphate aldolase activity
SSUD9_RS01865	COG0227	Belongs to the bacterial ribosomal protein bL28 family
SSUD9_RS01890	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SSUD9_RS01915	COG0436	Aminotransferase
SSUD9_RS01920	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
SSUD9_RS01940	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
SSUD9_RS01945	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SSUD9_RS01950	COG1609	Transcriptional regulator
SSUD9_RS01955	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SSUD9_RS01960	COG0154	amidase activity
SSUD9_RS01965	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SSUD9_RS01975	COG0335	large ribosomal subunit rRNA binding
SSUD9_RS01985	COG3142	Participates in the control of copper homeostasis
SSUD9_RS02000	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SSUD9_RS02005	COG1534	Rna-binding protein
SSUD9_RS02010	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
SSUD9_RS02015	COG1713	HD superfamily hydrolase involved in NAD metabolism
SSUD9_RS02030	COG0799	negative regulation of ribosome biogenesis
SSUD9_RS02035	COG2226	methyltransferase
SSUD9_RS02050	COG0789	Transcriptional regulator
SSUD9_RS02065	COG0242	peptide deformylase activity
SSUD9_RS02075	COG1640	4-alpha-glucanotransferase
SSUD9_RS02080	COG0058	SHG alpha-glucan phosphorylase activity
SSUD9_RS02095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS02095	COG2190	(PTS) system
SSUD9_RS02095	COG1263	PTS System
SSUD9_RS02110	COG0217	transcriptional regulatory protein
SSUD9_RS02120	COG4720	Psort location CytoplasmicMembrane, score
SSUD9_RS02130	COG1054	Belongs to the UPF0176 family
SSUD9_RS02140	COG1122	ATPase activity
SSUD9_RS02155	COG0357	Ribosomal RNA small subunit methyltransferase G
SSUD9_RS02160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUD9_RS02165	COG3331	DNA recombination
SSUD9_RS02170	COG4474	Belongs to the UPF0398 family
SSUD9_RS02175	COG3599	regulation of cell shape
SSUD9_RS02180	COG0116	Belongs to the methyltransferase superfamily
SSUD9_RS02190	COG1854	S-ribosylhomocysteine lyase activity
SSUD9_RS02195	COG1418	mRNA catabolic process
SSUD9_RS02205	COG1758	RNA polymerase activity
SSUD9_RS02210	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SSUD9_RS02215	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SSUD9_RS02220	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SSUD9_RS02220	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SSUD9_RS02225	COG0631	protein serine/threonine phosphatase activity
SSUD9_RS02230	COG0515	serine threonine protein kinase
SSUD9_RS02230	COG2815	serine threonine protein kinase
SSUD9_RS02265	COG1098	S1 RNA binding domain
SSUD9_RS02275	COG1739	Uncharacterized protein family UPF0029
SSUD9_RS02280	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SSUD9_RS02360	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SSUD9_RS02370	COG3557	Belongs to the UPF0374 family
SSUD9_RS02380	COG2188	Transcriptional regulator
SSUD9_RS02385	COG2188	Transcriptional regulator
SSUD9_RS02395	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS02405	COG3716	PTS system mannose fructose sorbose family IID component
SSUD9_RS02415	COG2017	converts alpha-aldose to the beta-anomer
SSUD9_RS02430	COG0346	lactoylglutathione lyase activity
SSUD9_RS02465	COG0494	nUDIX hydrolase
SSUD9_RS02480	COG1217	gtp-binding protein TYPA
SSUD9_RS02505	COG0681	Belongs to the peptidase S26 family
SSUD9_RS02530	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SSUD9_RS02545	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SSUD9_RS02550	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SSUD9_RS02555	COG1799	cell septum assembly
SSUD9_RS02570	COG3599	regulation of cell shape
SSUD9_RS02600	COG0494	nUDIX hydrolase
SSUD9_RS02600	COG0406	alpha-ribazole phosphatase activity
SSUD9_RS02610	COG4703	Protein of unknown function (DUF1797)
SSUD9_RS02620	COG0765	amino acid transport
SSUD9_RS02630	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
SSUD9_RS02665	COG0789	Transcriptional regulator
SSUD9_RS02680	COG0826	peptidase U32
SSUD9_RS02690	COG4443	Transcriptional Coactivator p15 (PC4)
SSUD9_RS02695	COG1268	BioY protein
SSUD9_RS02705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SSUD9_RS02720	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SSUD9_RS02725	COG1136	(ABC) transporter
SSUD9_RS02730	COG0577	efflux transmembrane transporter activity
SSUD9_RS02755	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SSUD9_RS02765	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SSUD9_RS02775	COG3859	Proton-coupled thiamine transporter YuaJ
SSUD9_RS02795	COG0772	Belongs to the SEDS family
SSUD9_RS02800	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
SSUD9_RS02815	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SSUD9_RS02820	COG0149	triose-phosphate isomerase activity
SSUD9_RS02830	COG2801	Transposase and inactivated derivatives
SSUD9_RS02840	COG1078	dGTPase activity
SSUD9_RS02870	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SSUD9_RS02875	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SSUD9_RS02880	COG2884	Cell division ATP-binding protein ftsE
SSUD9_RS02885	COG2177	Part of the ABC transporter FtsEX involved in
SSUD9_RS02910	COG1132	(ABC) transporter
SSUD9_RS02915	COG1132	(ABC) transporter
SSUD9_RS02920	COG1011	Hydrolase
SSUD9_RS02940	COG1737	Transcriptional regulator
SSUD9_RS02950	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SSUD9_RS02955	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
SSUD9_RS02960	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
SSUD9_RS02965	COG0237	dephospho-CoA kinase activity
SSUD9_RS02970	COG2814	Major facilitator Superfamily
SSUD9_RS02975	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUD9_RS02985	COG0557	exoribonuclease II activity
SSUD9_RS02990	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
SSUD9_RS03005	COG1063	alcohol dehydrogenase
SSUD9_RS03020	COG2217	Heavy metal translocating P-type atpase
SSUD9_RS03025	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SSUD9_RS03035	COG1136	(ABC) transporter
SSUD9_RS03055	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SSUD9_RS03055	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SSUD9_RS03065	COG1832	CoA-binding protein
SSUD9_RS03075	COG0343	queuine tRNA-ribosyltransferase activity
SSUD9_RS03090	COG1609	Transcriptional regulator
SSUD9_RS03105	COG0438	transferase activity, transferring glycosyl groups
SSUD9_RS03120	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SSUD9_RS03130	COG0765	amino acid transport
SSUD9_RS03135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS03145	COG0745	RESPONSE REGULATOR receiver
SSUD9_RS03155	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SSUD9_RS03165	COG0488	(ABC) transporter
SSUD9_RS03170	COG0768	penicillin binding
SSUD9_RS03175	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
SSUD9_RS03180	COG1181	Belongs to the D-alanine--D-alanine ligase family
SSUD9_RS03200	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SSUD9_RS03210	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SSUD9_RS03225	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SSUD9_RS03245	COG1609	Transcriptional regulator
SSUD9_RS03250	COG4209	transmembrane transport
SSUD9_RS03255	COG0395	ABC-type sugar transport system, permease component
SSUD9_RS03260	COG1653	transport
SSUD9_RS03270	COG1674	ftsk spoiiie
SSUD9_RS03270	COG0697	spore germination
SSUD9_RS03275	COG0346	lactoylglutathione lyase activity
SSUD9_RS03305	COG0625	glutathione transferase activity
SSUD9_RS03310	COG2244	polysaccharide biosynthetic process
SSUD9_RS03315	COG0528	UMP kinase activity
SSUD9_RS03320	COG0233	cytoplasmic translational termination
SSUD9_RS03325	COG2996	Protein conserved in bacteria
SSUD9_RS03340	COG4479	Belongs to the UPF0346 family
SSUD9_RS03345	COG1702	phosphate starvation-inducible protein PhoH
SSUD9_RS03350	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SSUD9_RS03355	COG2807	transmembrane transport
SSUD9_RS03365	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
SSUD9_RS03380	COG1234	tRNA 3'-trailer cleavage
SSUD9_RS03385	COG0300	oxidoreductase activity
SSUD9_RS03395	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SSUD9_RS03400	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SSUD9_RS03400	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SSUD9_RS03410	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SSUD9_RS03425	COG2384	SAM-dependent methyltransferase
SSUD9_RS03430	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SSUD9_RS03440	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SSUD9_RS03455	COG1088	dTDP-glucose 4,6-dehydratase activity
SSUD9_RS03460	COG1091	dTDP-4-dehydrorhamnose reductase activity
SSUD9_RS03490	COG1442	glycosyl transferase family 8
SSUD9_RS03490	COG1216	Glycosyl transferase, family 2
SSUD9_RS03520	COG1442	glycosyl transferase family 8
SSUD9_RS03525	COG1442	glycosyl transferase family 8
SSUD9_RS03525	COG1216	Glycosyl transferase, family 2
SSUD9_RS03540	COG1216	Glycosyl transferase, family 2
SSUD9_RS03570	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SSUD9_RS03580	COG0291	Belongs to the bacterial ribosomal protein bL35 family
SSUD9_RS03595	COG1368	sulfuric ester hydrolase activity
SSUD9_RS03600	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SSUD9_RS03605	COG0710	3-dehydroquinate dehydratase activity
SSUD9_RS03610	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
SSUD9_RS03615	COG0287	Prephenate dehydrogenase
SSUD9_RS03620	COG3679	Belongs to the UPF0342 family
SSUD9_RS03640	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
SSUD9_RS03645	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
SSUD9_RS03650	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SSUD9_RS03670	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SSUD9_RS03675	COG3022	response to hydroperoxide
SSUD9_RS03680	COG1316	TRANSCRIPTIONal
SSUD9_RS03685	COG3944	biosynthesis protein
SSUD9_RS03695	COG4464	protein tyrosine phosphatase activity
SSUD9_RS03705	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SSUD9_RS03710	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SSUD9_RS03715	COG1215	transferase activity, transferring glycosyl groups
SSUD9_RS03755	COG0562	UDP-galactopyranose mutase
SSUD9_RS03760	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SSUD9_RS03770	COG0077	Prephenate dehydratase
SSUD9_RS03775	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SSUD9_RS03790	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SSUD9_RS03800	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SSUD9_RS03805	COG0077	Prephenate dehydratase
SSUD9_RS03815	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SSUD9_RS03820	COG0562	UDP-galactopyranose mutase
SSUD9_RS03830	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
SSUD9_RS03845	COG0436	Aminotransferase
SSUD9_RS03865	COG0534	Mate efflux family protein
SSUD9_RS03875	COG0251	oxidation-reduction process
SSUD9_RS03880	COG1660	Displays ATPase and GTPase activities
SSUD9_RS03885	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SSUD9_RS03890	COG1481	regulation of sporulation
SSUD9_RS03915	COG0454	-acetyltransferase
SSUD9_RS03920	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SSUD9_RS03925	COG0549	Belongs to the carbamate kinase family
SSUD9_RS03930	COG1288	antiporter activity
SSUD9_RS03935	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SSUD9_RS03940	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SSUD9_RS03940	COG3064	Membrane
SSUD9_RS03940	COG3583	domain protein
SSUD9_RS03945	COG1438	arginine binding
SSUD9_RS03950	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
SSUD9_RS03955	COG0363	glucosamine-6-phosphate deaminase activity
SSUD9_RS03965	COG0463	Glycosyl transferase, family 2
SSUD9_RS04005	COG1696	Membrane protein involved in D-alanine export
SSUD9_RS04010	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SSUD9_RS04015	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SSUD9_RS04025	COG0435	Glutathione S-transferase
SSUD9_RS04030	COG1187	pseudouridine synthase activity
SSUD9_RS04035	COG0386	Belongs to the glutathione peroxidase family
SSUD9_RS04040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SSUD9_RS04045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SSUD9_RS04050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SSUD9_RS04055	COG1120	ATPase activity
SSUD9_RS04065	COG0204	Acyl-transferase
SSUD9_RS04070	COG1596	polysaccharide export
SSUD9_RS04070	COG1555	photosystem II stabilization
SSUD9_RS04075	COG2333	competence protein COMEC
SSUD9_RS04075	COG0658	competence protein
SSUD9_RS04085	COG0517	IMP dehydrogenase activity
SSUD9_RS04105	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUD9_RS04110	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SSUD9_RS04115	COG0470	DNA polymerase III
SSUD9_RS04120	COG4467	Involved in initiation control of chromosome replication
SSUD9_RS04130	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
SSUD9_RS04140	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SSUD9_RS04145	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SSUD9_RS04150	COG1393	Belongs to the ArsC family
SSUD9_RS04160	COG0708	Exodeoxyribonuclease III
SSUD9_RS04170	COG0531	amino acid
SSUD9_RS04210	COG1061	Type III restriction enzyme res subunit
SSUD9_RS04215	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SSUD9_RS04235	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SSUD9_RS04240	COG4684	Psort location CytoplasmicMembrane, score
SSUD9_RS04245	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SSUD9_RS04255	COG2759	Belongs to the formate--tetrahydrofolate ligase family
SSUD9_RS04300	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SSUD9_RS04305	COG1349	DNA-binding transcription factor activity
SSUD9_RS04320	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS04325	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS04330	COG1882	Formate acetyltransferase
SSUD9_RS04350	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SSUD9_RS04355	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SSUD9_RS04360	COG2801	Transposase and inactivated derivatives
SSUD9_RS04385	COG0210	DNA helicase
SSUD9_RS04425	COG1131	(ABC) transporter
SSUD9_RS04460	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
SSUD9_RS04465	COG1074	ATP-dependent DNA helicase activity
SSUD9_RS04475	COG0187	DNA topoisomerase II activity
SSUD9_RS04480	COG2184	nucleotidyltransferase activity
SSUD9_RS04495	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SSUD9_RS04510	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SSUD9_RS04530	COG0539	negative regulation of cytoplasmic translation
SSUD9_RS04555	COG1104	cysteine desulfurase activity
SSUD9_RS04560	COG0301	tRNA thio-modification
SSUD9_RS04565	COG1114	Component of the transport system for branched-chain amino acids
SSUD9_RS04570	COG0261	This protein binds to 23S rRNA in the presence of protein L20
SSUD9_RS04575	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SSUD9_RS04595	COG0564	pseudouridine synthase activity
SSUD9_RS04600	COG2824	Alkylphosphonate utilization operon protein PhnA
SSUD9_RS04610	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
SSUD9_RS04615	COG0540	Belongs to the ATCase OTCase family
SSUD9_RS04620	COG0505	Belongs to the CarA family
SSUD9_RS04630	COG2136	Putative SAM-dependent methyltransferase
SSUD9_RS04630	COG2521	methyltransferase
SSUD9_RS04635	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
SSUD9_RS04645	COG0228	four-way junction DNA binding
SSUD9_RS04660	COG1132	(ABC) transporter
SSUD9_RS04665	COG0726	polysaccharide deacetylase
SSUD9_RS04675	COG0083	homoserine kinase activity
SSUD9_RS04685	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SSUD9_RS04690	COG3842	ATPase activity
SSUD9_RS04695	COG1176	ABC-type spermidine putrescine transport system, permease component I
SSUD9_RS04700	COG1177	transmembrane transport
SSUD9_RS04710	COG0038	chloride channel
SSUD9_RS04725	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SSUD9_RS04740	COG0534	Mate efflux family protein
SSUD9_RS04745	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SSUD9_RS04750	COG0336	Belongs to the RNA methyltransferase TrmD family
SSUD9_RS04755	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SSUD9_RS04760	COG1349	DNA-binding transcription factor activity
SSUD9_RS04765	COG1105	Belongs to the carbohydrate kinase PfkB family
SSUD9_RS04770	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SSUD9_RS04770	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SSUD9_RS04770	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUD9_RS04780	COG1307	EDD domain protein, DegV family
SSUD9_RS04785	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
SSUD9_RS04790	COG0617	tRNA 3'-terminal CCA addition
SSUD9_RS04795	COG0488	(ABC) transporter
SSUD9_RS04805	COG1940	carbohydrate kinase activity
SSUD9_RS04820	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
SSUD9_RS04825	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SSUD9_RS04835	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
SSUD9_RS04850	COG0481	GTPase activity
SSUD9_RS04875	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
SSUD9_RS04880	COG2890	protein-(glutamine-N5) methyltransferase activity
SSUD9_RS04885	COG0009	L-threonylcarbamoyladenylate synthase
SSUD9_RS04895	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SSUD9_RS04905	COG0741	lytic transglycosylase activity
SSUD9_RS04910	COG4221	oxidoreductase activity
SSUD9_RS04935	COG1401	restriction endodeoxyribonuclease activity
SSUD9_RS04940	COG4268	DNA restriction-modification system
SSUD9_RS04950	COG2188	Transcriptional regulator
SSUD9_RS04955	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
SSUD9_RS04960	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SSUD9_RS04975	COG1660	Displays ATPase and GTPase activities
SSUD9_RS04980	COG4974	Belongs to the 'phage' integrase family
SSUD9_RS04995	COG0745	RESPONSE REGULATOR receiver
SSUD9_RS05015	COG1136	(ABC) transporter
SSUD9_RS05040	COG2382	esterase
SSUD9_RS05050	COG3708	Transcriptional regulator
SSUD9_RS05050	COG2207	Transcriptional regulator
SSUD9_RS05055	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
SSUD9_RS05060	COG0647	UMP catabolic process
SSUD9_RS05065	COG4974	Belongs to the 'phage' integrase family
SSUD9_RS05075	COG1396	sequence-specific DNA binding
SSUD9_RS05080	COG3843	relaxase mobilization nuclease domain protein
SSUD9_RS05095	COG0613	PHP domain protein
SSUD9_RS05100	COG0542	response to heat
SSUD9_RS05105	COG1396	sequence-specific DNA binding
SSUD9_RS05135	COG1192	Involved in chromosome partitioning
SSUD9_RS05160	COG4443	Transcriptional Coactivator p15 (PC4)
SSUD9_RS05165	COG1475	DNA binding
SSUD9_RS05320	COG0270	DNA (cytosine-5-)-methyltransferase activity
SSUD9_RS05335	COG0222	ribosome binding
SSUD9_RS05340	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
SSUD9_RS05345	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SSUD9_RS05350	COG0758	DNA mediated transformation
SSUD9_RS05355	COG0110	maltose O-acetyltransferase activity
SSUD9_RS05360	COG1937	Protein conserved in bacteria
SSUD9_RS05370	COG0446	pyridine nucleotide-disulphide oxidoreductase
SSUD9_RS05380	COG1272	protein, Hemolysin III
SSUD9_RS05390	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SSUD9_RS05395	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SSUD9_RS05400	COG0582	viral genome integration into host DNA
SSUD9_RS05430	COG3716	PTS system mannose fructose sorbose family IID component
SSUD9_RS05435	COG3715	PTS system
SSUD9_RS05440	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS05455	COG1011	Hydrolase
SSUD9_RS05460	COG1285	pathogenesis
SSUD9_RS05465	COG1178	ABC-type Fe3 transport system permease component
SSUD9_RS05505	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SSUD9_RS05565	COG1705	Flagellar rod assembly protein muramidase FlgJ
SSUD9_RS05565	COG3942	CHAP domain
SSUD9_RS05620	COG0424	maF-like protein
SSUD9_RS05625	COG0737	Belongs to the 5'-nucleotidase family
SSUD9_RS05635	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
SSUD9_RS05640	COG0463	Glycosyl transferase, family 2
SSUD9_RS05650	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
SSUD9_RS05655	COG0284	orotidine-5'-phosphate decarboxylase activity
SSUD9_RS05660	COG0167	dihydroorotate dehydrogenase activity
SSUD9_RS05675	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SSUD9_RS05685	COG0297	glycogen (starch) synthase activity
SSUD9_RS05695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS05740	COG1126	abc transporter atp-binding protein
SSUD9_RS05750	COG0488	(ABC) transporter
SSUD9_RS05770	COG1454	alcohol dehydrogenase
SSUD9_RS05775	COG4372	Transposase
SSUD9_RS05825	COG1454	alcohol dehydrogenase
SSUD9_RS05850	COG3716	PTS system mannose fructose sorbose family IID component
SSUD9_RS05860	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS05880	COG1070	Carbohydrate kinase
SSUD9_RS05925	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS05925	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS05935	COG3711	transcriptional antiterminator
SSUD9_RS05940	COG3684	Belongs to the aldolase LacD family
SSUD9_RS05945	COG1105	Belongs to the carbohydrate kinase PfkB family
SSUD9_RS05950	COG0698	ribose 5-phosphate isomerase
SSUD9_RS05955	COG0698	ribose 5-phosphate isomerase
SSUD9_RS05960	COG1349	DNA-binding transcription factor activity
SSUD9_RS05990	COG1396	sequence-specific DNA binding
SSUD9_RS06015	COG1132	(ABC) transporter
SSUD9_RS06020	COG1132	(ABC) transporter
SSUD9_RS06025	COG0280	phosphate acetyltransferase
SSUD9_RS06030	COG0564	pseudouridine synthase activity
SSUD9_RS06035	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SSUD9_RS06040	COG2357	RelA SpoT domain protein
SSUD9_RS06045	COG4116	CYTH
SSUD9_RS06055	COG1104	cysteine desulfurase activity
SSUD9_RS06070	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
SSUD9_RS06075	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SSUD9_RS06085	COG3764	Sortase (surface protein transpeptidase)
SSUD9_RS06090	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SSUD9_RS06095	COG0039	L-malate dehydrogenase activity
SSUD9_RS06100	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SSUD9_RS06115	COG1079	Belongs to the binding-protein-dependent transport system permease family
SSUD9_RS06120	COG4603	Belongs to the binding-protein-dependent transport system permease family
SSUD9_RS06125	COG3845	ABC transporter
SSUD9_RS06130	COG1744	ABC transporter substrate-binding protein PnrA-like
SSUD9_RS06145	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
SSUD9_RS06150	COG2813	Specifically methylates the guanine in position
SSUD9_RS06155	COG1072	(Pantothenic acid kinase))
SSUD9_RS06170	COG5002	protein histidine kinase activity
SSUD9_RS06175	COG0745	RESPONSE REGULATOR receiver
SSUD9_RS06190	COG0704	Plays a role in the regulation of phosphate uptake
SSUD9_RS06195	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SSUD9_RS06200	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SSUD9_RS06205	COG0581	inorganic phosphate transmembrane transporter activity
SSUD9_RS06220	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
SSUD9_RS06220	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SSUD9_RS06225	COG0483	inositol monophosphate 1-phosphatase activity
SSUD9_RS06230	COG4476	Belongs to the UPF0223 family
SSUD9_RS06235	COG1393	Belongs to the ArsC family
SSUD9_RS06240	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SSUD9_RS06245	COG0196	riboflavin kinase activity
SSUD9_RS06250	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SSUD9_RS06290	COG0561	phosphatase activity
SSUD9_RS06295	COG2195	Cleaves the N-terminal amino acid of tripeptides
SSUD9_RS06310	COG1695	Transcriptional regulator
SSUD9_RS06330	COG3759	membrane
SSUD9_RS06335	COG1846	Transcriptional regulator
SSUD9_RS06350	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SSUD9_RS06355	COG2610	gluconate transmembrane transporter activity
SSUD9_RS06375	COG0302	gtp cyclohydrolase
SSUD9_RS06380	COG1051	belongs to the nudix hydrolase family
SSUD9_RS06405	COG0072	phenylalanine-tRNA ligase activity
SSUD9_RS06405	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUD9_RS06435	COG1028	Short-chain dehydrogenase reductase Sdr
SSUD9_RS06440	COG1312	Catalyzes the dehydration of D-mannonate
SSUD9_RS06450	COG0800	Aldolase
SSUD9_RS06460	COG3250	beta-galactosidase activity
SSUD9_RS06470	COG2211	Major facilitator Superfamily
SSUD9_RS06485	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SSUD9_RS06495	COG0355	proton-transporting ATP synthase activity, rotational mechanism
SSUD9_RS06500	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
SSUD9_RS06505	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
SSUD9_RS06510	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
SSUD9_RS06515	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SSUD9_RS06520	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SSUD9_RS06525	COG0356	it plays a direct role in the translocation of protons across the membrane
SSUD9_RS06535	COG1597	lipid kinase activity
SSUD9_RS06545	COG0701	Predicted permease
SSUD9_RS06550	COG3689	TIGRFAM TIGR03943 family protein
SSUD9_RS06555	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SSUD9_RS06570	COG0552	protein localization to endoplasmic reticulum
SSUD9_RS06575	COG0561	phosphatase activity
SSUD9_RS06580	COG0561	phosphatase activity
SSUD9_RS06585	COG1196	nuclear chromosome segregation
SSUD9_RS06620	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUD9_RS06625	COG0538	isocitrate dehydrogenase activity
SSUD9_RS06630	COG0372	Belongs to the citrate synthase family
SSUD9_RS06635	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SSUD9_RS06640	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SSUD9_RS06645	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SSUD9_RS06650	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SSUD9_RS06655	COG1609	Transcriptional regulator
SSUD9_RS06675	COG5492	domain, Protein
SSUD9_RS06685	COG3716	PTS system mannose fructose sorbose family IID component
SSUD9_RS06695	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS06700	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
SSUD9_RS06725	COG1028	Short-chain dehydrogenase reductase Sdr
SSUD9_RS06760	COG1476	TRANSCRIPTIONal
SSUD9_RS06785	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SSUD9_RS06795	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SSUD9_RS06800	COG4122	O-methyltransferase activity
SSUD9_RS06825	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUD9_RS06825	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUD9_RS06835	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SSUD9_RS06840	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SSUD9_RS06845	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SSUD9_RS06850	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SSUD9_RS06855	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SSUD9_RS06855	COG1116	anion transmembrane transporter activity
SSUD9_RS06860	COG4120	Belongs to the binding-protein-dependent transport system permease family
SSUD9_RS06880	COG3684	Belongs to the aldolase LacD family
SSUD9_RS06890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS06895	COG1126	abc transporter atp-binding protein
SSUD9_RS06900	COG0765	amino acid transport
SSUD9_RS06905	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SSUD9_RS06920	COG0657	acetylesterase activity
SSUD9_RS06920	COG2755	lipolytic protein G-D-S-L family
SSUD9_RS06925	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SSUD9_RS06935	COG0469	pyruvate kinase activity
SSUD9_RS06940	COG0205	6-phosphofructokinase activity
SSUD9_RS06950	COG2188	Transcriptional regulator
SSUD9_RS06955	COG1131	(ABC) transporter
SSUD9_RS06965	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
SSUD9_RS06970	COG2826	transposase and inactivated derivatives, IS30 family
SSUD9_RS06995	COG2151	metal-sulfur cluster biosynthetic enzyme
SSUD9_RS07000	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SSUD9_RS07005	COG0358	DNA primase activity
SSUD9_RS07010	COG1970	mechanosensitive ion channel activity
SSUD9_RS07015	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SSUD9_RS07020	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SSUD9_RS07030	COG0647	UMP catabolic process
SSUD9_RS07035	COG1051	belongs to the nudix hydrolase family
SSUD9_RS07045	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SSUD9_RS07055	COG0058	SHG alpha-glucan phosphorylase activity
SSUD9_RS07060	COG0813	purine-nucleoside phosphorylase activity
SSUD9_RS07065	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
SSUD9_RS07075	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
SSUD9_RS07080	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SSUD9_RS07085	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SSUD9_RS07105	COG1518	maintenance of DNA repeat elements
SSUD9_RS07115	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SSUD9_RS07130	COG2268	Band 7 protein
SSUD9_RS07135	COG1704	LemA family
SSUD9_RS07145	COG1573	uracil-dna glycosylase
SSUD9_RS07165	COG2226	methyltransferase
SSUD9_RS07170	COG0488	(ABC) transporter
SSUD9_RS07175	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SSUD9_RS07190	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SSUD9_RS07195	COG3442	glutamine amidotransferase
SSUD9_RS07200	COG2226	methyltransferase
SSUD9_RS07210	COG0488	(ABC) transporter
SSUD9_RS07245	COG3842	ATPase activity
SSUD9_RS07265	COG2190	(PTS) system
SSUD9_RS07265	COG1263	PTS System
SSUD9_RS07265	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS07270	COG3711	transcriptional antiterminator
SSUD9_RS07275	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SSUD9_RS07280	COG3527	Alpha-acetolactate decarboxylase
SSUD9_RS07290	COG0628	permease
SSUD9_RS07295	COG2706	6-phosphogluconolactonase activity
SSUD9_RS07305	COG1011	Hydrolase
SSUD9_RS07345	COG0560	Phosphoserine phosphatase
SSUD9_RS07350	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
SSUD9_RS07355	COG0187	DNA topoisomerase II activity
SSUD9_RS07360	COG0693	protein deglycase activity
SSUD9_RS07365	COG0772	Belongs to the SEDS family
SSUD9_RS07385	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SSUD9_RS07390	COG0716	FMN binding
SSUD9_RS07400	COG1605	Chorismate mutase
SSUD9_RS07400	COG0287	Prephenate dehydrogenase
SSUD9_RS07405	COG0038	chloride channel
SSUD9_RS07420	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SSUD9_RS07425	COG1466	dna polymerase III delta subunit
SSUD9_RS07460	COG0683	leucine binding
SSUD9_RS07475	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SSUD9_RS07480	COG0366	Alpha amylase catalytic
SSUD9_RS07490	COG0395	ABC-type sugar transport system, permease component
SSUD9_RS07495	COG1175	transmembrane transport
SSUD9_RS07500	COG1653	transport
SSUD9_RS07515	COG1653	transport
SSUD9_RS07525	COG2207	Transcriptional regulator
SSUD9_RS07530	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SSUD9_RS07535	COG0626	cystathionine gamma-synthase activity
SSUD9_RS07555	COG3547	Transposase (IS116 IS110 IS902 family)
SSUD9_RS07560	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SSUD9_RS07565	COG2827	Endonuclease containing a URI domain
SSUD9_RS07585	COG0640	Transcriptional regulator
SSUD9_RS07590	COG0513	Belongs to the DEAD box helicase family
SSUD9_RS07595	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUD9_RS07640	COG0494	nUDIX hydrolase
SSUD9_RS07645	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SSUD9_RS07655	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SSUD9_RS07660	COG1028	Short-chain dehydrogenase reductase Sdr
SSUD9_RS07695	COG0577	efflux transmembrane transporter activity
SSUD9_RS07700	COG1136	(ABC) transporter
SSUD9_RS07720	COG0436	Aminotransferase
SSUD9_RS07730	COG1174	glycine betaine transport
SSUD9_RS07735	COG1125	glycine betaine transport
SSUD9_RS07735	COG0517	IMP dehydrogenase activity
SSUD9_RS07755	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
SSUD9_RS07760	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
SSUD9_RS07765	COG1482	cell wall glycoprotein biosynthetic process
SSUD9_RS07770	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS07775	COG1940	carbohydrate kinase activity
SSUD9_RS07785	COG2273	Hydrolase Family 16
SSUD9_RS07795	COG0395	ABC-type sugar transport system, permease component
SSUD9_RS07830	COG3091	SprT-like family
SSUD9_RS07835	COG2183	response to ionizing radiation
SSUD9_RS07840	COG0656	L-ascorbic acid biosynthetic process
SSUD9_RS07845	COG4708	membrane
SSUD9_RS07850	COG2246	polysaccharide biosynthetic process
SSUD9_RS07860	COG0024	Methionine aminopeptidase
SSUD9_RS07870	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SSUD9_RS07875	COG2249	NAD(P)H dehydrogenase (quinone) activity
SSUD9_RS07880	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
SSUD9_RS07885	COG2131	deaminase
SSUD9_RS07905	COG1363	Peptidase, m42
SSUD9_RS07920	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SSUD9_RS07925	COG1956	GAF domain-containing protein
SSUD9_RS07945	COG0673	inositol 2-dehydrogenase activity
SSUD9_RS07950	COG0513	Belongs to the DEAD box helicase family
SSUD9_RS07955	COG0726	polysaccharide deacetylase
SSUD9_RS07970	COG0183	Belongs to the thiolase family
SSUD9_RS07975	COG3425	synthase
SSUD9_RS08000	COG0776	regulation of translation
SSUD9_RS08010	COG2755	lipolytic protein G-D-S-L family
SSUD9_RS08015	COG1307	EDD domain protein, DegV family
SSUD9_RS08020	COG0497	DNA recombination
SSUD9_RS08025	COG1438	arginine binding
SSUD9_RS08030	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SSUD9_RS08040	COG1722	exodeoxyribonuclease VII activity
SSUD9_RS08045	COG1570	exodeoxyribonuclease VII activity
SSUD9_RS08050	COG2321	neutral zinc metallopeptidase
SSUD9_RS08055	COG1755	Isoprenylcysteine carboxyl methyltransferase
SSUD9_RS08060	COG5002	protein histidine kinase activity
SSUD9_RS08065	COG0745	RESPONSE REGULATOR receiver
SSUD9_RS08090	COG1227	inorganic diphosphatase activity
SSUD9_RS08100	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SSUD9_RS08105	COG1253	flavin adenine dinucleotide binding
SSUD9_RS08110	COG1119	ATPase activity
SSUD9_RS08115	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SSUD9_RS08125	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SSUD9_RS08130	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SSUD9_RS08145	COG4470	Protein conserved in bacteria
SSUD9_RS08150	COG3480	Lon protease (S16) C-terminal proteolytic domain
SSUD9_RS08155	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SSUD9_RS08160	COG0742	ribosomal rna small subunit methyltransferase
SSUD9_RS08170	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SSUD9_RS08175	COG4483	Protein conserved in bacteria
SSUD9_RS08180	COG2197	response regulator
SSUD9_RS08185	COG2203	Gaf domain
SSUD9_RS08185	COG4585	Histidine kinase
SSUD9_RS08190	COG0842	Transport permease protein
SSUD9_RS08195	COG1131	(ABC) transporter
SSUD9_RS08210	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SSUD9_RS08220	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SSUD9_RS08220	COG2755	lipolytic protein G-D-S-L family
SSUD9_RS08225	COG0671	phosphoesterase, PA-phosphatase related
SSUD9_RS08230	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SSUD9_RS08245	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
SSUD9_RS08250	COG1187	pseudouridine synthase activity
SSUD9_RS08255	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
SSUD9_RS08260	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
SSUD9_RS08265	COG0582	viral genome integration into host DNA
SSUD9_RS08285	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SSUD9_RS08290	COG3763	UPF0154 protein
SSUD9_RS08300	COG3579	cysteine-type endopeptidase activity
SSUD9_RS08315	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SSUD9_RS08320	COG1254	Belongs to the acylphosphatase family
SSUD9_RS08330	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SSUD9_RS08335	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SSUD9_RS08365	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SSUD9_RS08380	COG1160	GTP binding
SSUD9_RS08390	COG1484	DNA-dependent DNA replication
SSUD9_RS08400	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SSUD9_RS08405	COG0628	permease
SSUD9_RS08410	COG0745	RESPONSE REGULATOR receiver
SSUD9_RS08415	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SSUD9_RS08425	COG0492	ferredoxin-NADP+ reductase activity
SSUD9_RS08435	COG0513	Belongs to the DEAD box helicase family
SSUD9_RS08455	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SSUD9_RS08460	COG0768	penicillin binding
SSUD9_RS08470	COG0275	rRNA processing
SSUD9_RS08515	COG4939	FMN-binding domain protein
SSUD9_RS08520	COG0142	geranyltranstransferase activity
SSUD9_RS08525	COG1252	NADH dehydrogenase
SSUD9_RS08540	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SSUD9_RS08545	COG0569	domain protein
SSUD9_RS08550	COG0534	Mate efflux family protein
SSUD9_RS08560	COG4224	UPF0291 protein
SSUD9_RS08565	COG0751	glycine-tRNA ligase activity
SSUD9_RS08590	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SSUD9_RS08595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SSUD9_RS08600	COG1464	Belongs to the NlpA lipoprotein family
SSUD9_RS08605	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SSUD9_RS08610	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SSUD9_RS08615	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SSUD9_RS08620	COG2252	PERMEase
SSUD9_RS08625	COG0561	phosphatase activity
SSUD9_RS08635	COG3715	PTS system
SSUD9_RS08640	COG3716	PTS system mannose fructose sorbose family IID component
SSUD9_RS08675	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
SSUD9_RS08725	COG0439	Biotin carboxylase
SSUD9_RS08745	COG1028	Short-chain dehydrogenase reductase Sdr
SSUD9_RS08750	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SSUD9_RS08755	COG2070	2-Nitropropane dioxygenase
SSUD9_RS08765	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SSUD9_RS08775	COG1024	Enoyl-CoA hydratase
SSUD9_RS08780	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SSUD9_RS08785	COG0527	aspartate kinase activity
SSUD9_RS08795	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SSUD9_RS08800	COG0736	holo-[acyl-carrier-protein] synthase activity
SSUD9_RS08805	COG0653	protein targeting
SSUD9_RS08815	COG1940	carbohydrate kinase activity
SSUD9_RS08820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS08820	COG2190	(PTS) system
SSUD9_RS08820	COG1263	PTS System
SSUD9_RS08825	COG1621	beta-fructofuranosidase activity
SSUD9_RS08830	COG1609	Transcriptional regulator
SSUD9_RS08835	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SSUD9_RS08850	COG0006	proline dipeptidase activity
SSUD9_RS08855	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SSUD9_RS08875	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SSUD9_RS08880	COG0629	single-stranded DNA binding
SSUD9_RS08890	COG0095	Lipoate-protein ligase
SSUD9_RS08895	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS08910	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS08925	COG1447	Phosphotransferase system cellobiose-specific component IIA
SSUD9_RS08945	COG4095	Psort location CytoplasmicMembrane, score
SSUD9_RS08950	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS08955	COG0346	lactoylglutathione lyase activity
SSUD9_RS08960	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS08965	COG2207	Transcriptional regulator
SSUD9_RS08980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUD9_RS08980	COG2190	(PTS) system
SSUD9_RS08980	COG1263	PTS System
SSUD9_RS08985	COG3711	transcriptional antiterminator
SSUD9_RS09000	COG0508	dehydrogenase complex catalyzes the overall conversion of
SSUD9_RS09005	COG0022	dehydrogenase e1 component
SSUD9_RS09005	COG0508	dehydrogenase complex catalyzes the overall conversion of
SSUD9_RS09010	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SSUD9_RS09015	COG2860	membrane
SSUD9_RS09030	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SSUD9_RS09035	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
SSUD9_RS09045	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SSUD9_RS09050	COG0195	Participates in both transcription termination and antitermination
SSUD9_RS09065	COG0220	tRNA (guanine-N7-)-methyltransferase activity
SSUD9_RS09075	COG4473	ABC transporter
SSUD9_RS09080	COG1131	(ABC) transporter
SSUD9_RS09085	COG0537	adenosine 5'-monophosphoramidase activity
SSUD9_RS09095	COG1316	TRANSCRIPTIONal
SSUD9_RS09105	COG0802	atpase or kinase
SSUD9_RS09135	COG0601	transmembrane transport
SSUD9_RS09140	COG4608	Belongs to the ABC transporter superfamily
SSUD9_RS09150	COG0747	negative chemotaxis
SSUD9_RS09155	COG1686	Belongs to the peptidase S11 family
SSUD9_RS09170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SSUD9_RS09175	COG0719	Fe-S assembly protein
SSUD9_RS09185	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SSUD9_RS09190	COG4862	establishment of competence for transformation
SSUD9_RS09195	COG1968	undecaprenyl-diphosphatase activity
SSUD9_RS09200	COG0765	amino acid transport
SSUD9_RS09205	COG1126	abc transporter atp-binding protein
SSUD9_RS09220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SSUD9_RS09225	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
SSUD9_RS09230	COG0440	acetolactate synthase activity
SSUD9_RS09235	COG0028	Belongs to the TPP enzyme family
SSUD9_RS09240	COG0463	Glycosyl transferase, family 2
SSUD9_RS09255	COG0129	dihydroxy-acid dehydratase activity
SSUD9_RS09265	COG2151	metal-sulfur cluster biosynthetic enzyme
SSUD9_RS09320	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SSUD9_RS09335	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SSUD9_RS09360	COG3842	ATPase activity
SSUD9_RS09370	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SSUD9_RS09395	COG1185	polyribonucleotide nucleotidyltransferase activity
SSUD9_RS09400	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
SSUD9_RS09405	COG1131	(ABC) transporter
SSUD9_RS09445	COG1187	pseudouridine synthase activity
SSUD9_RS09460	COG0242	peptide deformylase activity
SSUD9_RS09470	COG0066	3-isopropylmalate dehydratase activity
SSUD9_RS09495	COG2309	aminopeptidase activity
SSUD9_RS09510	COG2176	DNA-directed DNA polymerase activity
SSUD9_RS09515	COG2376	Dihydroxyacetone kinase
SSUD9_RS09525	COG2376	Dihydroxyacetone kinase
SSUD9_RS09530	COG1461	Dihydroxyacetone kinase
SSUD9_RS09535	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SSUD9_RS09540	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SSUD9_RS09550	COG0442	prolyl-tRNA aminoacylation
SSUD9_RS09560	COG4589	Belongs to the CDS family
SSUD9_RS09565	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SSUD9_RS09570	COG1862	Preprotein translocase
SSUD9_RS09580	COG1181	Belongs to the D-alanine--D-alanine ligase family
SSUD9_RS09580	COG2918	glutathione biosynthetic process
SSUD9_RS09590	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
SSUD9_RS09595	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SSUD9_RS09615	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SSUD9_RS09620	COG0542	response to heat
SSUD9_RS09625	COG4463	regulation of RNA biosynthetic process
SSUD9_RS09640	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
SSUD9_RS09675	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUD9_RS09680	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUD9_RS09685	COG0492	ferredoxin-NADP+ reductase activity
SSUD9_RS09690	COG0564	pseudouridine synthase activity
SSUD9_RS09725	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SSUD9_RS09735	COG3481	metal-dependent phosphohydrolase, HD sub domain
SSUD9_RS09745	COG1564	THIamine pyrophosphokinase
SSUD9_RS09755	COG1162	GTPase activity
SSUD9_RS09765	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
SSUD9_RS09770	COG1132	(ABC) transporter
SSUD9_RS09800	COG4115	mRNA cleavage
SSUD9_RS09825	COG0084	hydrolase, TatD family'
SSUD9_RS09835	COG1847	R3H domain protein
SSUD9_RS09845	COG0594	ribonuclease P activity
SSUD9_RS09850	COG0165	Argininosuccinate lyase
SSUD9_RS09855	COG0137	argininosuccinate synthase activity
SSUD9_RS09865	COG1827	regulation of RNA biosynthetic process
SSUD9_RS09920	COG0756	dUTP diphosphatase activity
SSUD9_RS09925	COG1132	(ABC) transporter
SSUD9_RS09930	COG1132	(ABC) transporter
SSUD9_RS09940	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
SSUD9_RS09945	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SSUD9_RS09950	COG0705	Rhomboid family
SSUD9_RS09955	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SSUD9_RS09960	COG1473	amidohydrolase
SSUD9_RS09965	COG2171	N-acyltransferase activity
SSUD9_RS09975	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SSUD9_RS09995	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SSUD9_RS10020	COG3623	hexulose-6-phosphate isomerase
SSUD9_RS10045	COG1523	belongs to the glycosyl hydrolase 13 family
SSUD9_RS10050	COG1609	Transcriptional regulator
SSUD9_RS10055	COG1126	abc transporter atp-binding protein
SSUD9_RS10060	COG0765	amino acid transport
SSUD9_RS10065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS10070	COG3942	CHAP domain
SSUD9_RS10075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUD9_RS10085	COG1447	Phosphotransferase system cellobiose-specific component IIA
SSUD9_RS10095	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUD9_RS10095	COG3711	transcriptional antiterminator
SSUD9_RS10105	COG2723	6-phospho-beta-galactosidase activity
SSUD9_RS10110	COG1486	melibiose metabolic process
SSUD9_RS10120	COG3590	peptidase
SSUD9_RS10125	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUD9_RS10130	COG1321	iron dependent repressor
SSUD9_RS10130	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUD9_RS10135	COG1121	(ABC) transporter
SSUD9_RS10145	COG0803	Belongs to the bacterial solute-binding protein 9 family
SSUD9_RS10165	COG1490	D-aminoacyl-tRNA deacylase activity
SSUD9_RS10175	COG0737	Belongs to the 5'-nucleotidase family
SSUD9_RS10195	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SSUD9_RS10215	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SSUD9_RS10240	COG0737	Belongs to the 5'-nucleotidase family
SSUD9_RS10250	COG1328	CTP reductase activity
SSUD9_RS10255	COG1126	abc transporter atp-binding protein
SSUD9_RS10265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUD9_RS10270	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SSUD9_RS10290	COG1438	arginine binding
SSUD9_RS10295	COG0018	arginyl-trna synthetase
SSUD9_RS10320	COG1640	4-alpha-glucanotransferase
SSUD9_RS10325	COG2182	Extracellular solute-binding protein
SSUD9_RS10330	COG1175	transmembrane transport
SSUD9_RS10335	COG3833	ABC-type maltose transport systems, permease component
SSUD9_RS10340	COG5521	maltodextrose utilization protein MalA
SSUD9_RS10345	COG1609	Transcriptional regulator
SSUD9_RS10350	COG1523	belongs to the glycosyl hydrolase 13 family
SSUD9_RS10355	COG1780	Probably involved in ribonucleotide reductase function
SSUD9_RS10360	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUD9_RS10365	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SSUD9_RS10370	COG2153	protein acetylation
SSUD9_RS10375	COG4989	oxidoreductase activity
SSUD9_RS10380	COG1216	Glycosyl transferase, family 2
SSUD9_RS10400	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
SSUD9_RS10415	COG0305	Participates in initiation and elongation during chromosome replication
SSUD9_RS10420	COG0359	binds to the 23S rRNA
SSUD9_RS10430	COG0445	tRNA wobble uridine modification
SSUD9_RS10435	COG0494	nUDIX hydrolase
SSUD9_RS10440	COG1733	regulation of RNA biosynthetic process
SSUD9_RS10450	COG0482	sulfurtransferase activity
SSUD9_RS10455	COG1760	l-serine dehydratase
SSUD9_RS10470	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SSUD9_RS10475	COG1122	ATPase activity
SSUD9_RS10480	COG1122	ATPase activity
SSUD9_RS10485	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SSUD9_RS10490	COG1426	Protein conserved in bacteria
SSUD9_RS10495	COG0612	Peptidase, M16
SSUD9_RS10500	COG0612	Peptidase, M16
SSUD9_RS10570	COG0582	viral genome integration into host DNA
SSUD9_RS10580	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
SSUD9_RS10585	COG0517	IMP dehydrogenase activity
SSUD9_RS10585	COG0516	GMP reductase activity
SSUD9_RS10595	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUD9_RS10600	COG0488	(ABC) transporter
SSUD9_RS10630	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
SSUD9_RS10635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SSUD9_RS10640	COG1475	DNA binding
SSUD9_RS10700	COG1621	beta-fructofuranosidase activity
SSUD9_RS10705	COG2273	Hydrolase Family 16