locus-tag class description CR542_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CR542_RS00005 PF00308 Bacterial dnaA protein CR542_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CR542_RS00010 PF02767 DNA polymerase III beta subunit, central domain CR542_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CR542_RS00025 PF01381 Helix-turn-helix CR542_RS00030 PF01926 50S ribosome-binding GTPase CR542_RS00030 PF06071 Protein of unknown function (DUF933) CR542_RS00035 PF01195 Peptidyl-tRNA hydrolase CR542_RS00040 PF03461 TRCF domain CR542_RS00040 PF00271 Helicase conserved C-terminal domain CR542_RS00040 PF00270 DEAD/DEAH box helicase CR542_RS00040 PF02559 CarD-like/TRCF domain CR542_RS00040 PF17757 UvrB interaction domain CR542_RS00045 PF01479 S4 domain CR542_RS00065 PF01171 PP-loop family CR542_RS00070 PF00156 Phosphoribosyl transferase domain CR542_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) CR542_RS00075 PF17862 AAA+ lid domain CR542_RS00075 PF01434 Peptidase family M41 CR542_RS00075 PF06480 FtsH Extracellular CR542_RS00185 PF04085 rod shape-determining protein MreC CR542_RS00200 PF14572 Phosphoribosyl synthetase-associated domain CR542_RS00200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CR542_RS00205 PF00155 Aminotransferase class I and II CR542_RS00210 PF02565 Recombination protein O C terminal CR542_RS00210 PF11967 Recombination protein O N terminal CR542_RS00215 PF02504 Fatty acid synthesis protein CR542_RS00220 PF00550 Phosphopantetheine attachment site CR542_RS00225 PF01259 SAICAR synthetase CR542_RS00235 PF00156 Phosphoribosyl transferase domain CR542_RS00235 PF13537 Glutamine amidotransferase domain CR542_RS00240 PF02769 AIR synthase related protein, C-terminal domain CR542_RS00240 PF00586 AIR synthase related protein, N-terminal domain CR542_RS00245 PF00551 Formyl transferase CR542_RS00250 PF01808 AICARFT/IMPCHase bienzyme CR542_RS00250 PF02142 MGS-like domain CR542_RS00255 PF02086 D12 class N6 adenine-specific DNA methyltransferase CR542_RS00260 PF01555 DNA methylase CR542_RS00265 PF04556 DpnII restriction endonuclease CR542_RS00270 PF04556 DpnII restriction endonuclease CR542_RS00275 PF02843 Phosphoribosylglycinamide synthetase, C domain CR542_RS00275 PF02844 Phosphoribosylglycinamide synthetase, N domain CR542_RS00275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CR542_RS00280 PF00731 AIR carboxylase CR542_RS00285 PF02222 ATP-grasp domain CR542_RS00285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CR542_RS00295 PF10397 Adenylosuccinate lyase C-terminus CR542_RS00295 PF00206 Lyase CR542_RS00300 PF00005 ABC transporter CR542_RS00325 PF00005 ABC transporter CR542_RS00335 PF00664 ABC transporter transmembrane region CR542_RS00335 PF00005 ABC transporter CR542_RS00340 PF17864 RuvB AAA lid domain CR542_RS00340 PF05491 RuvB C-terminal winged helix domain CR542_RS00340 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR542_RS00350 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS00360 PF02875 Mur ligase family, glutamate ligase domain CR542_RS00360 PF08245 Mur ligase middle domain CR542_RS00375 PF08676 MutL C terminal dimerisation domain CR542_RS00375 PF01119 DNA mismatch repair protein, C-terminal domain CR542_RS00380 PF01330 RuvA N terminal domain CR542_RS00380 PF07499 RuvA, C-terminal domain CR542_RS00385 PF00958 GMP synthase C terminal domain CR542_RS00385 PF13673 Acetyltransferase (GNAT) domain CR542_RS00385 PF13302 Acetyltransferase (GNAT) domain CR542_RS00385 PF03352 Methyladenine glycosylase CR542_RS00385 PF00117 Glutamine amidotransferase class-I CR542_RS00390 PF18146 Damage-inducible protein CinA KH domain CR542_RS00390 PF00994 Probable molybdopterin binding domain CR542_RS00390 PF02464 Competence-damaged protein CR542_RS00395 PF00154 recA bacterial DNA recombination protein CR542_RS00400 PF03960 ArsC family CR542_RS00405 PF06135 IreB regulatory phosphoprotein CR542_RS00410 PF03652 Holliday junction resolvase CR542_RS00415 PF06949 Protein of unknown function (DUF1292) CR542_RS00430 PF00338 Ribosomal protein S10p/S20e CR542_RS00435 PF00297 Ribosomal protein L3 CR542_RS00440 PF00573 Ribosomal protein L4/L1 family CR542_RS00445 PF00276 Ribosomal protein L23 CR542_RS00450 PF03947 Ribosomal Proteins L2, C-terminal domain CR542_RS00450 PF00181 Ribosomal Proteins L2, RNA binding domain CR542_RS00455 PF00203 Ribosomal protein S19 CR542_RS00460 PF00237 Ribosomal protein L22p/L17e CR542_RS00465 PF07650 KH domain CR542_RS00465 PF00189 Ribosomal protein S3, C-terminal domain CR542_RS00470 PF00252 Ribosomal protein L16p/L10e CR542_RS00475 PF00831 Ribosomal L29 protein CR542_RS00480 PF00366 Ribosomal protein S17 CR542_RS00485 PF00238 Ribosomal protein L14p/L23e CR542_RS00490 PF00467 KOW motif CR542_RS00490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CR542_RS00495 PF00673 ribosomal L5P family C-terminus CR542_RS00495 PF00281 Ribosomal protein L5 CR542_RS00500 PF00253 Ribosomal protein S14p/S29e CR542_RS00510 PF00410 Ribosomal protein S8 CR542_RS00520 PF00347 Ribosomal protein L6 CR542_RS00525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CR542_RS00530 PF00333 Ribosomal protein S5, N-terminal domain CR542_RS00530 PF03719 Ribosomal protein S5, C-terminal domain CR542_RS00535 PF00327 Ribosomal protein L30p/L7e CR542_RS00540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CR542_RS00545 PF00344 SecY translocase CR542_RS00555 PF01176 Translation initiation factor 1A / IF-1 CR542_RS00560 PF00444 Ribosomal protein L36 CR542_RS00565 PF00416 Ribosomal protein S13/S18 CR542_RS00570 PF00411 Ribosomal protein S11 CR542_RS00575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CR542_RS00575 PF01000 RNA polymerase Rpb3/RpoA insert domain CR542_RS00575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CR542_RS00580 PF01196 Ribosomal protein L17 CR542_RS00685 PF00589 Phage integrase family CR542_RS00685 PF14659 Phage integrase, N-terminal SAM-like domain CR542_RS00695 PF02486 Replication initiation factor CR542_RS00695 PF18106 Rolling Circle replication initiation protein N-terminal domain CR542_RS00735 PF01047 MarR family CR542_RS00740 PF00005 ABC transporter CR542_RS00745 PF00950 ABC 3 transport family CR542_RS00750 PF01297 Zinc-uptake complex component A periplasmic CR542_RS00750 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CR542_RS00755 PF03965 Penicillinase repressor CR542_RS00770 PF00579 tRNA synthetases class I (W and Y) CR542_RS00770 PF01479 S4 domain CR542_RS00775 PF00912 Transglycosylase CR542_RS00775 PF00905 Penicillin binding protein transpeptidase domain CR542_RS00780 PF00562 RNA polymerase Rpb2, domain 6 CR542_RS00780 PF04561 RNA polymerase Rpb2, domain 2 CR542_RS00780 PF04563 RNA polymerase beta subunit CR542_RS00780 PF10385 RNA polymerase beta subunit external 1 domain CR542_RS00780 PF04560 RNA polymerase Rpb2, domain 7 CR542_RS00780 PF04565 RNA polymerase Rpb2, domain 3 CR542_RS00785 PF05000 RNA polymerase Rpb1, domain 4 CR542_RS00785 PF04997 RNA polymerase Rpb1, domain 1 CR542_RS00785 PF00623 RNA polymerase Rpb1, domain 2 CR542_RS00785 PF04983 RNA polymerase Rpb1, domain 3 CR542_RS00785 PF04998 RNA polymerase Rpb1, domain 5 CR542_RS00795 PF17676 LD-carboxypeptidase C-terminal domain CR542_RS00795 PF02016 LD-carboxypeptidase N-terminal domain CR542_RS00800 PF00437 Type II/IV secretion system protein CR542_RS00805 PF00482 Type II secretion system (T2SS), protein F CR542_RS00810 PF07963 Prokaryotic N-terminal methylation motif CR542_RS00840 PF00871 Acetokinase family CR542_RS00850 PF07155 ECF-type riboflavin transporter, S component CR542_RS00855 PF02875 Mur ligase family, glutamate ligase domain CR542_RS00855 PF08245 Mur ligase middle domain CR542_RS00860 PF05343 M42 glutamyl aminopeptidase CR542_RS00870 PF00085 Thioredoxin CR542_RS00880 PF14794 Domain of unknown function (DUF4479) CR542_RS00880 PF01588 Putative tRNA binding domain CR542_RS00890 PF00436 Single-strand binding protein family CR542_RS00900 PF00166 Chaperonin 10 Kd subunit CR542_RS00905 PF00118 TCP-1/cpn60 chaperonin family CR542_RS00910 PF00164 Ribosomal protein S12/S23 CR542_RS00915 PF00177 Ribosomal protein S7p/S5e CR542_RS00920 PF03144 Elongation factor Tu domain 2 CR542_RS00920 PF00009 Elongation factor Tu GTP binding domain CR542_RS00920 PF00679 Elongation factor G C-terminus CR542_RS00920 PF03764 Elongation factor G, domain IV CR542_RS00920 PF14492 Elongation Factor G, domain II CR542_RS00925 PF05649 Peptidase family M13 CR542_RS00925 PF01431 Peptidase family M13 CR542_RS00930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CR542_RS00930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CR542_RS00935 PF00162 Phosphoglycerate kinase CR542_RS00945 PF13411 MerR HTH family regulatory protein CR542_RS00950 PF00120 Glutamine synthetase, catalytic domain CR542_RS00950 PF03951 Glutamine synthetase, beta-Grasp domain CR542_RS00955 PF00753 Metallo-beta-lactamase superfamily CR542_RS00955 PF17770 Ribonuclease J C-terminal domain CR542_RS00955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CR542_RS00960 PF07288 Protein of unknown function (DUF1447) CR542_RS00965 PF00814 Glycoprotease family CR542_RS00975 PF00814 Glycoprotease family CR542_RS00980 PF12833 Helix-turn-helix domain CR542_RS00980 PF02311 AraC-like ligand binding domain CR542_RS00985 PF01547 Bacterial extracellular solute-binding protein CR542_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS01000 PF16874 Glycosyl hydrolase family 36 C-terminal domain CR542_RS01000 PF16875 Glycosyl hydrolase family 36 N-terminal domain CR542_RS01015 PF03601 Conserved hypothetical protein 698 CR542_RS01025 PF13732 Domain of unknown function (DUF4162) CR542_RS01025 PF00005 ABC transporter CR542_RS01040 PF00232 Glycosyl hydrolase family 1 CR542_RS01045 PF08279 HTH domain CR542_RS01045 PF04394 Protein of unknown function, DUF536 CR542_RS01050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR542_RS01055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS01060 PF03611 PTS system sugar-specific permease component CR542_RS01065 PF00456 Transketolase, thiamine diphosphate binding domain CR542_RS01070 PF02779 Transketolase, pyrimidine binding domain CR542_RS01070 PF02780 Transketolase, C-terminal domain CR542_RS01070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CR542_RS01075 PF03009 Glycerophosphoryl diester phosphodiesterase family CR542_RS01080 PF02575 YbaB/EbfC DNA-binding family CR542_RS01085 PF01380 SIS domain CR542_RS01100 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CR542_RS01100 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CR542_RS01100 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CR542_RS01110 PF00144 Beta-lactamase CR542_RS01120 PF01476 LysM domain CR542_RS01120 PF05257 CHAP domain CR542_RS01125 PF02901 Pyruvate formate lyase-like CR542_RS01125 PF01228 Glycine radical CR542_RS01130 PF11798 IMS family HHH motif CR542_RS01130 PF11799 impB/mucB/samB family C-terminal domain CR542_RS01130 PF00817 impB/mucB/samB family CR542_RS01140 PF13460 NAD(P)H-binding CR542_RS01160 PF00480 ROK family CR542_RS01165 PF02378 Phosphotransferase system, EIIC CR542_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS01190 PF00005 ABC transporter CR542_RS01200 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CR542_RS01205 PF00403 Heavy-metal-associated domain CR542_RS01215 PF00403 Heavy-metal-associated domain CR542_RS01220 PF14490 Helix-hairpin-helix containing domain CR542_RS01220 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CR542_RS01220 PF13538 UvrD-like helicase C-terminal domain CR542_RS01225 PF10502 Signal peptidase, peptidase S26 CR542_RS01230 PF01351 Ribonuclease HII CR542_RS01230 PF11858 Domain of unknown function (DUF3378) CR542_RS01235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CR542_RS01235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CR542_RS01250 PF16657 Maltogenic Amylase, C-terminal domain CR542_RS01250 PF00128 Alpha amylase, catalytic domain CR542_RS01255 PF00367 phosphotransferase system, EIIB CR542_RS01255 PF02378 Phosphotransferase system, EIIC CR542_RS01260 PF07702 UTRA domain CR542_RS01260 PF00392 Bacterial regulatory proteins, gntR family CR542_RS01280 PF01713 Smr domain CR542_RS01280 PF00488 MutS domain V CR542_RS01345 PF00085 Thioredoxin CR542_RS01350 PF00501 AMP-binding enzyme CR542_RS01350 PF13193 AMP-binding enzyme C-terminal domain CR542_RS01355 PF01625 Peptide methionine sulfoxide reductase CR542_RS01355 PF01641 SelR domain CR542_RS01410 PF12704 MacB-like periplasmic core domain CR542_RS01410 PF02687 FtsX-like permease family CR542_RS01410 PF00005 ABC transporter CR542_RS01415 PF01235 Sodium:alanine symporter family CR542_RS01450 PF00005 ABC transporter CR542_RS01460 PF02796 Helix-turn-helix domain of resolvase CR542_RS01460 PF00239 Resolvase, N terminal domain CR542_RS01475 PF00924 Mechanosensitive ion channel CR542_RS01490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CR542_RS01490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CR542_RS01495 PF01180 Dihydroorotate dehydrogenase CR542_RS01500 PF09587 Bacterial capsule synthesis protein PGA_cap CR542_RS01520 PF00005 ABC transporter CR542_RS01525 PF00440 Bacterial regulatory proteins, tetR family CR542_RS01560 PF03788 LrgA family CR542_RS01565 PF04172 LrgB-like family CR542_RS01570 PF01226 Formate/nitrite transporter CR542_RS01575 PF00230 Major intrinsic protein CR542_RS01580 PF05872 Bacterial protein of unknown function (DUF853) CR542_RS01585 PF00293 NUDIX domain CR542_RS01610 PF00471 Ribosomal protein L33 CR542_RS01615 PF01783 Ribosomal L32p protein family CR542_RS01620 PF13393 Histidyl-tRNA synthetase CR542_RS01620 PF03129 Anticodon binding domain CR542_RS01625 PF00107 Zinc-binding dehydrogenase CR542_RS01625 PF08240 Alcohol dehydrogenase GroES-like domain CR542_RS01630 PF00465 Iron-containing alcohol dehydrogenase CR542_RS01630 PF00171 Aldehyde dehydrogenase family CR542_RS01635 PF00291 Pyridoxal-phosphate dependent enzyme CR542_RS01635 PF14821 Threonine synthase N terminus CR542_RS01650 PF00664 ABC transporter transmembrane region CR542_RS01650 PF00005 ABC transporter CR542_RS01660 PF01554 MatE CR542_RS01665 PF00288 GHMP kinases N terminal domain CR542_RS01665 PF10509 Galactokinase galactose-binding signature CR542_RS01665 PF08544 GHMP kinases C terminal CR542_RS01675 PF08544 GHMP kinases C terminal CR542_RS01675 PF00288 GHMP kinases N terminal domain CR542_RS01680 PF01070 FMN-dependent dehydrogenase CR542_RS01685 PF00664 ABC transporter transmembrane region CR542_RS01685 PF00005 ABC transporter CR542_RS01690 PF00005 ABC transporter CR542_RS01690 PF00664 ABC transporter transmembrane region CR542_RS01700 PF05167 Uncharacterised ACR (DUF711) CR542_RS01705 PF00300 Histidine phosphatase superfamily (branch 1) CR542_RS01710 PF01628 HrcA protein C terminal domain CR542_RS01710 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CR542_RS01715 PF01025 GrpE CR542_RS01720 PF00012 Hsp70 protein CR542_RS01725 PF00226 DnaJ domain CR542_RS01725 PF01556 DnaJ C terminal domain CR542_RS01725 PF00684 DnaJ central domain CR542_RS01735 PF03099 Biotin/lipoate A/B protein ligase family CR542_RS01740 PF01425 Amidase CR542_RS01745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS01750 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS01765 PF13443 Cro/C1-type HTH DNA-binding domain CR542_RS01780 PF01475 Ferric uptake regulator family CR542_RS01785 PF01416 tRNA pseudouridine synthase CR542_RS01800 PF04260 Protein of unknown function (DUF436) CR542_RS01820 PF12697 Alpha/beta hydrolase family CR542_RS01825 PF00106 short chain dehydrogenase CR542_RS01830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS01830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CR542_RS01850 PF05697 Bacterial trigger factor protein (TF) CR542_RS01850 PF05698 Bacterial trigger factor protein (TF) C-terminus CR542_RS01850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CR542_RS01880 PF05066 HB1, ASXL, restriction endonuclease HTH domain CR542_RS01885 PF00117 Glutamine amidotransferase class-I CR542_RS01885 PF06418 CTP synthase N-terminus CR542_RS01895 PF01116 Fructose-bisphosphate aldolase class-II CR542_RS01900 PF00830 Ribosomal L28 family CR542_RS01935 PF00271 Helicase conserved C-terminal domain CR542_RS01935 PF00270 DEAD/DEAH box helicase CR542_RS01935 PF17191 RecG wedge domain CR542_RS01940 PF01610 Transposase CR542_RS01940 PF13683 Integrase core domain CR542_RS01945 PF17763 Glutaminase/Asparaginase C-terminal domain CR542_RS01945 PF00710 Asparaginase, N-terminal CR542_RS01950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR542_RS01960 PF00582 Universal stress protein family CR542_RS01965 PF00155 Aminotransferase class I and II CR542_RS01970 PF08222 CodY helix-turn-helix domain CR542_RS01970 PF06018 CodY GAF-like domain CR542_RS01975 PF00857 Isochorismatase family CR542_RS01985 PF01245 Ribosomal protein L19 CR542_RS01995 PF02686 Glu-tRNAGln amidotransferase C subunit CR542_RS02000 PF01425 Amidase CR542_RS02005 PF02637 GatB domain CR542_RS02005 PF02934 GatB/GatE catalytic domain CR542_RS02015 PF00356 Bacterial regulatory proteins, lacI family CR542_RS02020 PF00288 GHMP kinases N terminal domain CR542_RS02020 PF08544 GHMP kinases C terminal CR542_RS02020 PF10509 Galactokinase galactose-binding signature CR542_RS02025 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CR542_RS02025 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CR542_RS02040 PF03932 CutC family CR542_RS02050 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS02055 PF01926 50S ribosome-binding GTPase CR542_RS02065 PF01985 CRS1 / YhbY (CRM) domain CR542_RS02070 PF01467 Cytidylyltransferase-like CR542_RS02075 PF01966 HD domain CR542_RS02085 PF00857 Isochorismatase family CR542_RS02100 PF13649 Methyltransferase domain CR542_RS02110 PF05636 HIGH Nucleotidyl Transferase CR542_RS02115 PF13411 MerR HTH family regulatory protein CR542_RS02115 PF07739 TipAS antibiotic-recognition domain CR542_RS02125 PF01327 Polypeptide deformylase CR542_RS02130 PF17871 AAA lid domain CR542_RS02130 PF10431 C-terminal, D2-small domain, of ClpB protein CR542_RS02130 PF07724 AAA domain (Cdc48 subfamily) CR542_RS02130 PF00004 ATPase family associated with various cellular activities (AAA) CR542_RS02135 PF02446 4-alpha-glucanotransferase CR542_RS02140 PF00343 Carbohydrate phosphorylase CR542_RS02150 PF03372 Endonuclease/Exonuclease/phosphatase family CR542_RS02155 PF02378 Phosphotransferase system, EIIC CR542_RS02155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR542_RS02155 PF00367 phosphotransferase system, EIIB CR542_RS02170 PF01709 Transcriptional regulator CR542_RS02180 PF07155 ECF-type riboflavin transporter, S component CR542_RS02190 PF00581 Rhodanese-like domain CR542_RS02190 PF17773 UPF0176 acylphosphatase like domain CR542_RS02190 PF12368 Rhodanase C-terminal CR542_RS02200 PF12558 ATP-binding cassette cobalt transporter CR542_RS02200 PF00005 ABC transporter CR542_RS02210 PF00313 'Cold-shock' DNA-binding domain CR542_RS02215 PF02527 rRNA small subunit methyltransferase G CR542_RS02220 PF00912 Transglycosylase CR542_RS02220 PF00905 Penicillin binding protein transpeptidase domain CR542_RS02225 PF03838 Recombination protein U CR542_RS02230 PF06908 YspA SLOG family CR542_RS02235 PF05103 DivIVA protein CR542_RS02245 PF01170 Putative RNA methylase family UPF0020 CR542_RS02245 PF02926 THUMP domain CR542_RS02250 PF18041 MapZ extracellular domain 1 CR542_RS02250 PF18708 MapZ extracellular C-terminal domain 2 CR542_RS02255 PF02664 S-Ribosylhomocysteinase (LuxS) CR542_RS02260 PF01966 HD domain CR542_RS02260 PF00013 KH domain CR542_RS02260 PF12072 Domain of unknown function (DUF3552) CR542_RS02265 PF00625 Guanylate kinase CR542_RS02270 PF01192 RNA polymerase Rpb6 CR542_RS02280 PF00271 Helicase conserved C-terminal domain CR542_RS02280 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CR542_RS02280 PF17764 3′ DNA-binding domain (3′BD) CR542_RS02280 PF18074 Primosomal protein N C-terminal domain CR542_RS02280 PF04851 Type III restriction enzyme, res subunit CR542_RS02285 PF00551 Formyl transferase CR542_RS02285 PF02911 Formyl transferase, C-terminal domain CR542_RS02290 PF01189 16S rRNA methyltransferase RsmB/F CR542_RS02290 PF01029 NusB family CR542_RS02300 PF03793 PASTA domain CR542_RS02300 PF00069 Protein kinase domain CR542_RS02310 PF07730 Histidine kinase CR542_RS02310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS02315 PF00196 Bacterial regulatory proteins, luxR family CR542_RS02315 PF00072 Response regulator receiver domain CR542_RS02320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR542_RS02325 PF00575 S1 RNA binding domain CR542_RS02330 PF00291 Pyridoxal-phosphate dependent enzyme CR542_RS02335 PF02899 Phage integrase, N-terminal SAM-like domain CR542_RS02335 PF00589 Phage integrase family CR542_RS02415 PF00436 Single-strand binding protein family CR542_RS02485 PF00753 Metallo-beta-lactamase superfamily CR542_RS02490 PF13307 Helicase C-terminal domain CR542_RS02490 PF00929 Exonuclease CR542_RS02495 PF00696 Amino acid kinase family CR542_RS02495 PF01472 PUA domain CR542_RS02500 PF00171 Aldehyde dehydrogenase family CR542_RS02505 PF03807 NADP oxidoreductase coenzyme F420-dependent CR542_RS02505 PF14748 Pyrroline-5-carboxylate reductase dimerisation CR542_RS02515 PF02645 Uncharacterised protein, DegV family COG1307 CR542_RS02520 PF00392 Bacterial regulatory proteins, gntR family CR542_RS02520 PF00155 Aminotransferase class I and II CR542_RS02525 PF03883 Peroxide stress protein YaaA CR542_RS02535 PF02706 Chain length determinant protein CR542_RS02540 PF13614 AAA domain CR542_RS02550 PF02397 Bacterial sugar transferase CR542_RS02560 PF00534 Glycosyl transferases group 1 CR542_RS02560 PF13439 Glycosyltransferase Family 4 CR542_RS02575 PF01501 Glycosyl transferase family 8 CR542_RS02575 PF00535 Glycosyl transferase family 2 CR542_RS02580 PF01501 Glycosyl transferase family 8 CR542_RS02580 PF00535 Glycosyl transferase family 2 CR542_RS02600 PF13472 GDSL-like Lipase/Acylhydrolase family CR542_RS02600 PF02348 Cytidylyltransferase CR542_RS02615 PF08666 SAF domain CR542_RS02615 PF03102 NeuB family CR542_RS02620 PF02350 UDP-N-acetylglucosamine 2-epimerase CR542_RS02630 PF13472 GDSL-like Lipase/Acylhydrolase family CR542_RS02630 PF02348 Cytidylyltransferase CR542_RS02675 PF00589 Phage integrase family CR542_RS02675 PF02899 Phage integrase, N-terminal SAM-like domain CR542_RS02690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR542_RS02695 PF01202 Shikimate kinase CR542_RS02700 PF00800 Prephenate dehydratase CR542_RS02705 PF03816 Cell envelope-related transcriptional attenuator domain CR542_RS02710 PF05958 tRNA (Uracil-5-)-methyltransferase CR542_RS02710 PF01938 TRAM domain CR542_RS02720 PF03275 UDP-galactopyranose mutase CR542_RS02725 PF02525 Flavodoxin-like fold CR542_RS02740 PF00155 Aminotransferase class I and II CR542_RS02745 PF01336 OB-fold nucleic acid binding domain CR542_RS02745 PF00152 tRNA synthetases class II (D, K and N) CR542_RS02750 PF01336 OB-fold nucleic acid binding domain CR542_RS02750 PF00152 tRNA synthetases class II (D, K and N) CR542_RS02770 PF01554 MatE CR542_RS02775 PF01042 Endoribonuclease L-PSP CR542_RS02780 PF03668 P-loop ATPase protein family CR542_RS02785 PF01933 Uncharacterised protein family UPF0052 CR542_RS02790 PF10298 WhiA N-terminal LAGLIDADG-like domain CR542_RS02790 PF02650 WhiA C-terminal HTH domain CR542_RS02790 PF14527 WhiA LAGLIDADG-like domain CR542_RS02805 PF13673 Acetyltransferase (GNAT) domain CR542_RS02810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR542_RS02810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR542_RS02815 PF00696 Amino acid kinase family CR542_RS02820 PF03606 C4-dicarboxylate anaerobic carrier CR542_RS02825 PF01546 Peptidase family M20/M25/M40 CR542_RS02830 PF00728 Glycosyl hydrolase family 20, catalytic domain CR542_RS02830 PF07501 G5 domain CR542_RS02830 PF00746 LPXTG cell wall anchor motif CR542_RS02830 PF04650 YSIRK type signal peptide CR542_RS02835 PF02863 Arginine repressor, C-terminal domain CR542_RS02835 PF01316 Arginine repressor, DNA binding domain CR542_RS02840 PF02547 Queuosine biosynthesis protein CR542_RS02845 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CR542_RS02875 PF13193 AMP-binding enzyme C-terminal domain CR542_RS02875 PF00501 AMP-binding enzyme CR542_RS02880 PF03062 MBOAT, membrane-bound O-acyltransferase family CR542_RS02885 PF00550 Phosphopantetheine attachment site CR542_RS02890 PF04914 DltD protein CR542_RS02900 PF13409 Glutathione S-transferase, N-terminal domain CR542_RS02905 PF01479 S4 domain CR542_RS02905 PF00849 RNA pseudouridylate synthase CR542_RS02910 PF00255 Glutathione peroxidase CR542_RS02915 PF01032 FecCD transport family CR542_RS02920 PF01032 FecCD transport family CR542_RS02925 PF01497 Periplasmic binding protein CR542_RS02930 PF00005 ABC transporter CR542_RS02935 PF08245 Mur ligase middle domain CR542_RS02935 PF02875 Mur ligase family, glutamate ligase domain CR542_RS02940 PF01553 Acyltransferase CR542_RS02945 PF10531 SLBB domain CR542_RS02950 PF03772 Competence protein CR542_RS02950 PF00753 Metallo-beta-lactamase superfamily CR542_RS02950 PF13567 Domain of unknown function (DUF4131) CR542_RS02955 PF00571 CBS domain CR542_RS02970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR542_RS02970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR542_RS02975 PF02223 Thymidylate kinase CR542_RS02980 PF09115 DNA polymerase III, delta subunit, C terminal CR542_RS02985 PF06156 Initiation control protein YabA CR542_RS02990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CR542_RS02995 PF00266 Aminotransferase class-V CR542_RS03005 PF01842 ACT domain CR542_RS03005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CR542_RS03005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CR542_RS03010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CR542_RS03010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CR542_RS03015 PF03960 ArsC family CR542_RS03030 PF03372 Endonuclease/Exonuclease/phosphatase family CR542_RS03040 PF13520 Amino acid permease CR542_RS03100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR542_RS03100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR542_RS03100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR542_RS03100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR542_RS03105 PF12822 ECF transporter, substrate-specific component CR542_RS03110 PF02441 Flavoprotein CR542_RS03115 PF02441 Flavoprotein CR542_RS03115 PF04127 DNA / pantothenate metabolism flavoprotein CR542_RS03120 PF01268 Formate--tetrahydrofolate ligase CR542_RS03160 PF04055 Radical SAM superfamily CR542_RS03165 PF00455 DeoR C terminal sensor domain CR542_RS03165 PF08220 DeoR-like helix-turn-helix domain CR542_RS03170 PF04198 Putative sugar-binding domain CR542_RS03170 PF13936 Helix-turn-helix domain CR542_RS03175 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS03180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS03185 PF02378 Phosphotransferase system, EIIC CR542_RS03190 PF01228 Glycine radical CR542_RS03190 PF02901 Pyruvate formate lyase-like CR542_RS03195 PF00923 Transaldolase/Fructose-6-phosphate aldolase CR542_RS03205 PF00465 Iron-containing alcohol dehydrogenase CR542_RS03210 PF02774 Semialdehyde dehydrogenase, dimerisation domain CR542_RS03210 PF01118 Semialdehyde dehydrogenase, NAD binding domain CR542_RS03215 PF00701 Dihydrodipicolinate synthetase family CR542_RS03235 PF09186 Domain of unknown function (DUF1949) CR542_RS03235 PF01205 Uncharacterized protein family UPF0029 CR542_RS03240 PF04851 Type III restriction enzyme, res subunit CR542_RS03240 PF00271 Helicase conserved C-terminal domain CR542_RS03250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CR542_RS03250 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CR542_RS03320 PF01938 TRAM domain CR542_RS03320 PF05958 tRNA (Uracil-5-)-methyltransferase CR542_RS03325 PF02631 RecX family CR542_RS03330 PF04167 Protein of unknown function (DUF402) CR542_RS03340 PF07702 UTRA domain CR542_RS03340 PF00392 Bacterial regulatory proteins, gntR family CR542_RS03345 PF07702 UTRA domain CR542_RS03345 PF00392 Bacterial regulatory proteins, gntR family CR542_RS03350 PF01301 Glycosyl hydrolases family 35 CR542_RS03355 PF03830 PTS system sorbose subfamily IIB component CR542_RS03365 PF03613 PTS system mannose/fructose/sorbose family IID component CR542_RS03375 PF01263 Aldose 1-epimerase CR542_RS03410 PF10458 Valyl tRNA synthetase tRNA binding arm CR542_RS03410 PF00133 tRNA synthetases class I (I, L, M and V) CR542_RS03410 PF08264 Anticodon-binding domain of tRNA CR542_RS03425 PF00293 NUDIX domain CR542_RS03435 PF03590 Aspartate-ammonia ligase CR542_RS03440 PF03144 Elongation factor Tu domain 2 CR542_RS03440 PF00009 Elongation factor Tu GTP binding domain CR542_RS03440 PF14492 Elongation Factor G, domain II CR542_RS03440 PF00679 Elongation factor G C-terminus CR542_RS03455 PF10502 Signal peptidase, peptidase S26 CR542_RS03485 PF08245 Mur ligase middle domain CR542_RS03485 PF02875 Mur ligase family, glutamate ligase domain CR542_RS03490 PF03033 Glycosyltransferase family 28 N-terminal domain CR542_RS03490 PF04101 Glycosyltransferase family 28 C-terminal domain CR542_RS03495 PF08478 POTRA domain, FtsQ-type CR542_RS03500 PF02491 SHS2 domain inserted in FTSA CR542_RS03500 PF11983 Membrane-attachment and polymerisation-promoting switch CR542_RS03505 PF00091 Tubulin/FtsZ family, GTPase domain CR542_RS03505 PF12327 FtsZ family, C-terminal domain CR542_RS03510 PF01168 Alanine racemase, N-terminal domain CR542_RS03515 PF04472 Cell division protein SepF CR542_RS03530 PF05103 DivIVA protein CR542_RS03540 PF08264 Anticodon-binding domain of tRNA CR542_RS03540 PF00133 tRNA synthetases class I (I, L, M and V) CR542_RS03555 PF00300 Histidine phosphatase superfamily (branch 1) CR542_RS03555 PF00293 NUDIX domain CR542_RS03560 PF07724 AAA domain (Cdc48 subfamily) CR542_RS03560 PF10431 C-terminal, D2-small domain, of ClpB protein CR542_RS03560 PF00004 ATPase family associated with various cellular activities (AAA) CR542_RS03560 PF17871 AAA lid domain CR542_RS03565 PF08796 Protein of unknown function (DUF1797) CR542_RS03570 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS03575 PF00005 ABC transporter CR542_RS03580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CR542_RS03580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CR542_RS03595 PF10502 Signal peptidase, peptidase S26 CR542_RS03620 PF13411 MerR HTH family regulatory protein CR542_RS03635 PF16325 Peptidase family U32 C-terminal domain CR542_RS03635 PF01136 Peptidase family U32 CR542_RS03650 PF02229 Transcriptional Coactivator p15 (PC4) CR542_RS03655 PF02632 BioY family CR542_RS03665 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS03665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR542_RS03675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CR542_RS03680 PF00005 ABC transporter CR542_RS03685 PF12704 MacB-like periplasmic core domain CR542_RS03685 PF02687 FtsX-like permease family CR542_RS03715 PF00152 tRNA synthetases class II (D, K and N) CR542_RS03715 PF01336 OB-fold nucleic acid binding domain CR542_RS03725 PF04073 Aminoacyl-tRNA editing domain CR542_RS03735 PF09515 Thiamine transporter protein (Thia_YuaJ) CR542_RS03755 PF01098 Cell cycle protein CR542_RS03760 PF00311 Phosphoenolpyruvate carboxylase CR542_RS03775 PF03143 Elongation factor Tu C-terminal domain CR542_RS03775 PF00009 Elongation factor Tu GTP binding domain CR542_RS03775 PF03144 Elongation factor Tu domain 2 CR542_RS03780 PF00121 Triosephosphate isomerase CR542_RS03790 PF01966 HD domain CR542_RS03805 PF00689 Cation transporting ATPase, C-terminus CR542_RS03805 PF00690 Cation transporter/ATPase, N-terminus CR542_RS03820 PF04892 VanZ like family CR542_RS03825 PF08331 Domain of unknown function (DUF1730) CR542_RS03835 PF00005 ABC transporter CR542_RS03840 PF02687 FtsX-like permease family CR542_RS03840 PF18075 FtsX extracellular domain CR542_RS03850 PF07664 Ferrous iron transport protein B C terminus CR542_RS03850 PF17910 FeoB cytosolic helical domain CR542_RS03850 PF02421 Ferrous iron transport protein B CR542_RS03850 PF07670 Nucleoside recognition CR542_RS03865 PF00005 ABC transporter CR542_RS03865 PF00664 ABC transporter transmembrane region CR542_RS03870 PF00005 ABC transporter CR542_RS03870 PF00664 ABC transporter transmembrane region CR542_RS03875 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS03885 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CR542_RS03890 PF00367 phosphotransferase system, EIIB CR542_RS03890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR542_RS03890 PF02378 Phosphotransferase system, EIIC CR542_RS03895 PF01380 SIS domain CR542_RS03895 PF01418 Helix-turn-helix domain, rpiR family CR542_RS03900 PF02130 Uncharacterized protein family UPF0054 CR542_RS03905 PF01219 Prokaryotic diacylglycerol kinase CR542_RS03910 PF07650 KH domain CR542_RS03910 PF01926 50S ribosome-binding GTPase CR542_RS03915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CR542_RS03915 PF06827 Zinc finger found in FPG and IleRS CR542_RS03915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CR542_RS03920 PF01121 Dephospho-CoA kinase CR542_RS03925 PF07690 Major Facilitator Superfamily CR542_RS03925 PF00083 Sugar (and other) transporter CR542_RS03930 PF00471 Ribosomal protein L33 CR542_RS03940 PF00152 tRNA synthetases class II (D, K and N) CR542_RS03940 PF01336 OB-fold nucleic acid binding domain CR542_RS03945 PF17876 Cold shock domain CR542_RS03945 PF00575 S1 RNA binding domain CR542_RS03945 PF00773 RNB domain CR542_RS03945 PF08206 Ribonuclease B OB domain CR542_RS03950 PF01668 SmpB protein CR542_RS03955 PF00107 Zinc-binding dehydrogenase CR542_RS03955 PF08240 Alcohol dehydrogenase GroES-like domain CR542_RS03960 PF03848 Tellurite resistance protein TehB CR542_RS03960 PF09313 Domain of unknown function (DUF1971) CR542_RS03965 PF03577 Peptidase family C69 CR542_RS03970 PF00403 Heavy-metal-associated domain CR542_RS03975 PF08534 Redoxin CR542_RS03985 PF00005 ABC transporter CR542_RS04005 PF01548 Transposase CR542_RS04005 PF02371 Transposase IS116/IS110/IS902 family CR542_RS04025 PF01053 Cys/Met metabolism PLP-dependent enzyme CR542_RS04030 PF00155 Aminotransferase class I and II CR542_RS04035 PF02311 AraC-like ligand binding domain CR542_RS04035 PF12833 Helix-turn-helix domain CR542_RS04040 PF16874 Glycosyl hydrolase family 36 C-terminal domain CR542_RS04040 PF16875 Glycosyl hydrolase family 36 N-terminal domain CR542_RS04045 PF01547 Bacterial extracellular solute-binding protein CR542_RS04050 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS04060 PF00128 Alpha amylase, catalytic domain CR542_RS04065 PF16657 Maltogenic Amylase, C-terminal domain CR542_RS04065 PF00128 Alpha amylase, catalytic domain CR542_RS04075 PF00574 Clp protease CR542_RS04080 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CR542_RS04085 PF13458 Periplasmic binding protein CR542_RS04090 PF02653 Branched-chain amino acid transport system / permease component CR542_RS04095 PF02653 Branched-chain amino acid transport system / permease component CR542_RS04095 PF11862 Domain of unknown function (DUF3382) CR542_RS04100 PF00005 ABC transporter CR542_RS04100 PF12399 Branched-chain amino acid ATP-binding cassette transporter CR542_RS04105 PF00005 ABC transporter CR542_RS04110 PF02677 Epoxyqueuosine reductase QueH CR542_RS04120 PF06144 DNA polymerase III, delta subunit CR542_RS04125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CR542_RS04125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CR542_RS04130 PF02872 5'-nucleotidase, C-terminal domain CR542_RS04130 PF17936 Bacterial Ig domain CR542_RS04130 PF00149 Calcineurin-like phosphoesterase CR542_RS04140 PF00654 Voltage gated chloride channel CR542_RS04145 PF01817 Chorismate mutase type II CR542_RS04145 PF02153 Prephenate dehydrogenase CR542_RS04150 PF00253 Ribosomal protein S14p/S29e CR542_RS04155 PF00258 Flavodoxin CR542_RS04160 PF01368 DHH family CR542_RS04160 PF02272 DHHA1 domain CR542_RS04165 PF02424 ApbE family CR542_RS04170 PF01197 Ribosomal protein L31 CR542_RS04180 PF02562 PhoH-like protein CR542_RS04185 PF01717 Cobalamin-independent synthase, Catalytic domain CR542_RS04190 PF07690 Major Facilitator Superfamily CR542_RS04205 PF13167 GTP-binding GTPase N-terminal CR542_RS04205 PF16360 GTP-binding GTPase Middle Region CR542_RS04205 PF01926 50S ribosome-binding GTPase CR542_RS04215 PF12706 Beta-lactamase superfamily domain CR542_RS04215 PF00753 Metallo-beta-lactamase superfamily CR542_RS04220 PF00106 short chain dehydrogenase CR542_RS04230 PF13091 PLD-like domain CR542_RS04235 PF01368 DHH family CR542_RS04235 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CR542_RS04235 PF17768 RecJ OB domain CR542_RS04235 PF02272 DHHA1 domain CR542_RS04245 PF00156 Phosphoribosyl transferase domain CR542_RS04255 PF04204 Homoserine O-succinyltransferase CR542_RS04265 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CR542_RS04270 PF01784 NIF3 (NGG1p interacting factor 3) CR542_RS04275 PF02535 ZIP Zinc transporter CR542_RS04280 PF00483 Nucleotidyl transferase CR542_RS04285 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CR542_RS04295 PF16363 GDP-mannose 4,6 dehydratase CR542_RS04300 PF04321 RmlD substrate binding domain CR542_RS04310 PF05036 Sporulation related domain CR542_RS04310 PF01520 N-acetylmuramoyl-L-alanine amidase CR542_RS04330 PF01501 Glycosyl transferase family 8 CR542_RS04330 PF00535 Glycosyl transferase family 2 CR542_RS04340 PF14524 Wzt C-terminal domain CR542_RS04340 PF00005 ABC transporter CR542_RS04360 PF01501 Glycosyl transferase family 8 CR542_RS04365 PF01501 Glycosyl transferase family 8 CR542_RS04365 PF00535 Glycosyl transferase family 2 CR542_RS04375 PF13439 Glycosyltransferase Family 4 CR542_RS04375 PF00534 Glycosyl transferases group 1 CR542_RS04380 PF00535 Glycosyl transferase family 2 CR542_RS04410 PF02224 Cytidylate kinase CR542_RS04415 PF05198 Translation initiation factor IF-3, N-terminal domain CR542_RS04415 PF00707 Translation initiation factor IF-3, C-terminal domain CR542_RS04420 PF01632 Ribosomal protein L35 CR542_RS04425 PF00453 Ribosomal protein L20 CR542_RS04435 PF00884 Sulfatase CR542_RS04440 PF10672 S-adenosylmethionine-dependent methyltransferase CR542_RS04440 PF17785 PUA-like domain CR542_RS04445 PF01487 Type I 3-dehydroquinase CR542_RS04450 PF01264 Chorismate synthase CR542_RS04455 PF02153 Prephenate dehydrogenase CR542_RS04460 PF06133 Control of competence regulator ComK, YlbF/YmcA CR542_RS04585 PF08439 Oligopeptidase F CR542_RS04585 PF01432 Peptidase family M3 CR542_RS04595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS04595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR542_RS04600 PF00580 UvrD/REP helicase N-terminal domain CR542_RS04600 PF13361 UvrD-like helicase C-terminal domain CR542_RS04610 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS04640 PF00005 ABC transporter CR542_RS04645 PF01541 GIY-YIG catalytic domain CR542_RS04645 PF02151 UvrB/uvrC motif CR542_RS04645 PF08459 UvrC Helix-hairpin-helix N-terminal CR542_RS04655 PF09269 Domain of unknown function (DUF1967) CR542_RS04655 PF01018 GTP1/OBG CR542_RS04655 PF01926 50S ribosome-binding GTPase CR542_RS04665 PF06458 MucBP domain CR542_RS04665 PF04650 YSIRK type signal peptide CR542_RS04665 PF00746 LPXTG cell wall anchor motif CR542_RS04670 PF12705 PD-(D/E)XK nuclease superfamily CR542_RS04675 PF13361 UvrD-like helicase C-terminal domain CR542_RS04675 PF00580 UvrD/REP helicase N-terminal domain CR542_RS04675 PF12705 PD-(D/E)XK nuclease superfamily CR542_RS04680 PF02660 Glycerol-3-phosphate acyltransferase CR542_RS04685 PF01751 Toprim domain CR542_RS04685 PF00986 DNA gyrase B subunit, carboxyl terminus CR542_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS04685 PF00204 DNA gyrase B CR542_RS04690 PF02661 Fic/DOC family CR542_RS04705 PF00521 DNA gyrase/topoisomerase IV, subunit A CR542_RS04705 PF03989 DNA gyrase C-terminal domain, beta-propeller CR542_RS04715 PF01063 Amino-transferase class IV CR542_RS04740 PF00575 S1 RNA binding domain CR542_RS04765 PF00266 Aminotransferase class-V CR542_RS04770 PF02926 THUMP domain CR542_RS04770 PF02568 Thiamine biosynthesis protein (ThiI) CR542_RS04775 PF05525 Branched-chain amino acid transport protein CR542_RS04780 PF00829 Ribosomal prokaryotic L21 protein CR542_RS04785 PF01016 Ribosomal L27 protein CR542_RS04795 PF03466 LysR substrate binding domain CR542_RS04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CR542_RS04800 PF01252 Signal peptidase (SPase) II CR542_RS04805 PF00849 RNA pseudouridylate synthase CR542_RS04805 PF01479 S4 domain CR542_RS04810 PF03831 PhnA domain CR542_RS04810 PF08274 PhnA Zinc-Ribbon CR542_RS04820 PF00156 Phosphoribosyl transferase domain CR542_RS04825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR542_RS04825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR542_RS04830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CR542_RS04830 PF00117 Glutamine amidotransferase class-I CR542_RS04835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR542_RS04835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CR542_RS04835 PF02142 MGS-like domain CR542_RS04840 PF04445 Putative SAM-dependent methyltransferase CR542_RS04845 PF01470 Pyroglutamyl peptidase CR542_RS04855 PF00886 Ribosomal protein S16 CR542_RS04865 PF00005 ABC transporter CR542_RS04865 PF00664 ABC transporter transmembrane region CR542_RS04870 PF00005 ABC transporter CR542_RS04870 PF00664 ABC transporter transmembrane region CR542_RS04875 PF01522 Polysaccharide deacetylase CR542_RS04880 PF00742 Homoserine dehydrogenase CR542_RS04880 PF03447 Homoserine dehydrogenase, NAD binding domain CR542_RS04885 PF00288 GHMP kinases N terminal domain CR542_RS04885 PF08544 GHMP kinases C terminal CR542_RS04895 PF01565 FAD binding domain CR542_RS04895 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CR542_RS04900 PF00005 ABC transporter CR542_RS04900 PF08402 TOBE domain CR542_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS04915 PF13416 Bacterial extracellular solute-binding protein CR542_RS04920 PF00654 Voltage gated chloride channel CR542_RS04930 PF06280 Fn3-like domain CR542_RS04930 PF00082 Subtilase family CR542_RS04930 PF02225 PA domain CR542_RS04935 PF01256 Carbohydrate kinase CR542_RS04940 PF00730 HhH-GPD superfamily base excision DNA repair protein CR542_RS04940 PF00633 Helix-hairpin-helix motif CR542_RS04940 PF10576 Iron-sulfur binding domain of endonuclease III CR542_RS04945 PF00478 IMP dehydrogenase / GMP reductase domain CR542_RS04950 PF01554 MatE CR542_RS04955 PF01782 RimM N-terminal domain CR542_RS04955 PF05239 PRC-barrel domain CR542_RS04960 PF01746 tRNA (Guanine-1)-methyltransferase CR542_RS04965 PF00155 Aminotransferase class I and II CR542_RS04970 PF08220 DeoR-like helix-turn-helix domain CR542_RS04970 PF00455 DeoR C terminal sensor domain CR542_RS04975 PF00294 pfkB family carbohydrate kinase CR542_RS04980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR542_RS04980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS04990 PF02645 Uncharacterised protein, DegV family COG1307 CR542_RS04995 PF01113 Dihydrodipicolinate reductase, N-terminus CR542_RS04995 PF05173 Dihydrodipicolinate reductase, C-terminus CR542_RS05000 PF01743 Poly A polymerase head domain CR542_RS05000 PF13735 tRNA nucleotidyltransferase domain 2 putative CR542_RS05000 PF12627 Probable RNA and SrmB- binding site of polymerase A CR542_RS05005 PF00005 ABC transporter CR542_RS05005 PF12848 ABC transporter CR542_RS05005 PF16326 ABC transporter C-terminal domain CR542_RS05015 PF00480 ROK family CR542_RS05030 PF00303 Thymidylate synthase CR542_RS05035 PF00186 Dihydrofolate reductase CR542_RS05045 PF07724 AAA domain (Cdc48 subfamily) CR542_RS05045 PF10431 C-terminal, D2-small domain, of ClpB protein CR542_RS05045 PF06689 ClpX C4-type zinc finger CR542_RS05050 PF01926 50S ribosome-binding GTPase CR542_RS05055 PF00334 Nucleoside diphosphate kinase CR542_RS05060 PF03144 Elongation factor Tu domain 2 CR542_RS05060 PF00679 Elongation factor G C-terminus CR542_RS05060 PF14492 Elongation Factor G, domain II CR542_RS05060 PF00009 Elongation factor Tu GTP binding domain CR542_RS05060 PF06421 GTP-binding protein LepA C-terminus CR542_RS05065 PF01361 Tautomerase enzyme CR542_RS05080 PF00265 Thymidine kinase CR542_RS05085 PF00472 RF-1 domain CR542_RS05085 PF03462 PCRF domain CR542_RS05090 PF05175 Methyltransferase small domain CR542_RS05095 PF03481 Putative GTP-binding controlling metal-binding CR542_RS05095 PF01300 Telomere recombination CR542_RS05105 PF00464 Serine hydroxymethyltransferase CR542_RS05120 PF00106 short chain dehydrogenase CR542_RS05145 PF07728 AAA domain (dynein-related subfamily) CR542_RS05145 PF12102 Domain of unknown function (DUF3578) CR542_RS05150 PF10117 McrBC 5-methylcytosine restriction system component CR542_RS05155 PF02540 NAD synthase CR542_RS05155 PF00958 GMP synthase C terminal domain CR542_RS05155 PF00117 Glutamine amidotransferase class-I CR542_RS05160 PF07702 UTRA domain CR542_RS05160 PF00392 Bacterial regulatory proteins, gntR family CR542_RS05165 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CR542_RS05170 PF02881 SRP54-type protein, helical bundle domain CR542_RS05170 PF00448 SRP54-type protein, GTPase domain CR542_RS05170 PF02978 Signal peptide binding domain CR542_RS05190 PF00589 Phage integrase family CR542_RS05190 PF13495 Phage integrase, N-terminal SAM-like domain CR542_RS05195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR542_RS05195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR542_RS05195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR542_RS05195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR542_RS05200 PF00512 His Kinase A (phospho-acceptor) domain CR542_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS05205 PF00486 Transcriptional regulatory protein, C terminal CR542_RS05205 PF00072 Response regulator receiver domain CR542_RS05225 PF00005 ABC transporter CR542_RS05255 PF00756 Putative esterase CR542_RS05255 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase CR542_RS05265 PF12833 Helix-turn-helix domain CR542_RS05265 PF06445 GyrI-like small molecule binding domain CR542_RS05270 PF01134 Glucose inhibited division protein A CR542_RS05275 PF13344 Haloacid dehalogenase-like hydrolase CR542_RS05295 PF08307 Glycosyl hydrolase family 98 C-terminal domain CR542_RS05295 PF08306 Glycosyl hydrolase family 98 CR542_RS05295 PF08305 NPCBM/NEW2 domain CR542_RS05300 PF00480 ROK family CR542_RS05315 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS05320 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS05330 PF00596 Class II Aldolase and Adducin N-terminal domain CR542_RS05335 PF07881 L-fucose isomerase, first N-terminal domain CR542_RS05335 PF02952 L-fucose isomerase, C-terminal domain CR542_RS05335 PF07882 L-fucose isomerase, second N-terminal domain CR542_RS05340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CR542_RS05340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CR542_RS05345 PF08220 DeoR-like helix-turn-helix domain CR542_RS05345 PF00455 DeoR C terminal sensor domain CR542_RS05355 PF03432 Relaxase/Mobilisation nuclease domain CR542_RS05365 PF00717 Peptidase S24-like CR542_RS05365 PF01381 Helix-turn-helix CR542_RS05375 PF11798 IMS family HHH motif CR542_RS05375 PF11799 impB/mucB/samB family C-terminal domain CR542_RS05375 PF00817 impB/mucB/samB family CR542_RS05405 PF00145 C-5 cytosine-specific DNA methylase CR542_RS05410 PF00145 C-5 cytosine-specific DNA methylase CR542_RS05435 PF05257 CHAP domain CR542_RS05435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CR542_RS05445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS05445 PF01348 Type II intron maturase CR542_RS05495 PF13495 Phage integrase, N-terminal SAM-like domain CR542_RS05495 PF00589 Phage integrase family CR542_RS05505 PF01381 Helix-turn-helix CR542_RS05510 PF01263 Aldose 1-epimerase CR542_RS05515 PF00232 Glycosyl hydrolase family 1 CR542_RS05520 PF02378 Phosphotransferase system, EIIC CR542_RS05520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS05525 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS05530 PF01791 DeoC/LacD family aldolase CR542_RS05535 PF00294 pfkB family carbohydrate kinase CR542_RS05540 PF02502 Ribose/Galactose Isomerase CR542_RS05545 PF02502 Ribose/Galactose Isomerase CR542_RS05550 PF00480 ROK family CR542_RS05555 PF00455 DeoR C terminal sensor domain CR542_RS05555 PF08220 DeoR-like helix-turn-helix domain CR542_RS05565 PF03432 Relaxase/Mobilisation nuclease domain CR542_RS05585 PF00580 UvrD/REP helicase N-terminal domain CR542_RS05585 PF13361 UvrD-like helicase C-terminal domain CR542_RS05605 PF06414 Zeta toxin CR542_RS05610 PF01381 Helix-turn-helix CR542_RS05665 PF02229 Transcriptional Coactivator p15 (PC4) CR542_RS05670 PF02195 ParB-like nuclease domain CR542_RS05670 PF17762 HTH domain found in ParB protein CR542_RS05675 PF01076 Plasmid recombination enzyme CR542_RS05715 PF00009 Elongation factor Tu GTP binding domain CR542_RS05715 PF00679 Elongation factor G C-terminus CR542_RS05715 PF03764 Elongation factor G, domain IV CR542_RS05715 PF14492 Elongation Factor G, domain II CR542_RS05745 PF01348 Type II intron maturase CR542_RS05745 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS05770 PF18652 Adhesin P1 N-terminal domain CR542_RS05770 PF06696 Streptococcal surface antigen repeat CR542_RS05770 PF08363 Glucan-binding protein C CR542_RS05770 PF16364 Cell surface antigen C-terminus CR542_RS05770 PF17998 Cell surface antigen I/II C2 terminal domain CR542_RS05800 PF01348 Type II intron maturase CR542_RS05800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS05855 PF00145 C-5 cytosine-specific DNA methylase CR542_RS05855 PF01381 Helix-turn-helix CR542_RS05875 PF00542 Ribosomal protein L7/L12 C-terminal domain CR542_RS05875 PF16320 Ribosomal protein L7/L12 dimerisation domain CR542_RS05880 PF00466 Ribosomal protein L10 CR542_RS05885 PF01396 Topoisomerase DNA binding C4 zinc finger CR542_RS05885 PF01751 Toprim domain CR542_RS05885 PF01131 DNA topoisomerase CR542_RS05890 PF02481 DNA recombination-mediator protein A CR542_RS05890 PF18255 DNA processing protein A sterile alpha motif domain CR542_RS05895 PF12464 Maltose acetyltransferase CR542_RS05895 PF14602 Hexapeptide repeat of succinyl-transferase CR542_RS05900 PF02583 Metal-sensitive transcriptional repressor CR542_RS05905 PF00581 Rhodanese-like domain CR542_RS05910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR542_RS05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS05920 PF03006 Haemolysin-III related CR542_RS05930 PF01351 Ribonuclease HII CR542_RS05935 PF01926 50S ribosome-binding GTPase CR542_RS05945 PF02545 Maf-like protein CR542_RS05950 PF00149 Calcineurin-like phosphoesterase CR542_RS05950 PF02872 5'-nucleotidase, C-terminal domain CR542_RS05955 PF01979 Amidohydrolase family CR542_RS05960 PF03167 Uracil DNA glycosylase superfamily CR542_RS05965 PF00535 Glycosyl transferase family 2 CR542_RS05970 PF00156 Phosphoribosyl transferase domain CR542_RS05975 PF00719 Inorganic pyrophosphatase CR542_RS05980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CR542_RS05985 PF01180 Dihydroorotate dehydrogenase CR542_RS05990 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CR542_RS05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CR542_RS05995 PF03466 LysR substrate binding domain CR542_RS06000 PF00483 Nucleotidyl transferase CR542_RS06005 PF00483 Nucleotidyl transferase CR542_RS06005 PF00132 Bacterial transferase hexapeptide (six repeats) CR542_RS06010 PF00534 Glycosyl transferases group 1 CR542_RS06010 PF08323 Starch synthase catalytic domain CR542_RS06015 PF00128 Alpha amylase, catalytic domain CR542_RS06015 PF02806 Alpha amylase, C-terminal all-beta domain CR542_RS06015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR542_RS06020 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS06025 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS06030 PF00293 NUDIX domain CR542_RS06055 PF00271 Helicase conserved C-terminal domain CR542_RS06055 PF04851 Type III restriction enzyme, res subunit CR542_RS06055 PF17757 UvrB interaction domain CR542_RS06055 PF02151 UvrB/uvrC motif CR542_RS06055 PF12344 Ultra-violet resistance protein B CR542_RS06065 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS06070 PF00005 ABC transporter CR542_RS06080 PF00005 ABC transporter CR542_RS06080 PF12848 ABC transporter CR542_RS06080 PF16326 ABC transporter C-terminal domain CR542_RS06085 PF01053 Cys/Met metabolism PLP-dependent enzyme CR542_RS06100 PF01263 Aldose 1-epimerase CR542_RS06105 PF00232 Glycosyl hydrolase family 1 CR542_RS06110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS06110 PF02378 Phosphotransferase system, EIIC CR542_RS06115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS06120 PF03123 CAT RNA binding domain CR542_RS06120 PF00874 PRD domain CR542_RS06125 PF01791 DeoC/LacD family aldolase CR542_RS06130 PF00294 pfkB family carbohydrate kinase CR542_RS06135 PF02502 Ribose/Galactose Isomerase CR542_RS06140 PF02502 Ribose/Galactose Isomerase CR542_RS06150 PF00455 DeoR C terminal sensor domain CR542_RS06150 PF08220 DeoR-like helix-turn-helix domain CR542_RS06180 PF01381 Helix-turn-helix CR542_RS06180 PF08671 Anti-repressor SinI CR542_RS06185 PF00730 HhH-GPD superfamily base excision DNA repair protein CR542_RS06185 PF14815 NUDIX domain CR542_RS06195 PF00664 ABC transporter transmembrane region CR542_RS06195 PF00005 ABC transporter CR542_RS06200 PF00664 ABC transporter transmembrane region CR542_RS06200 PF00005 ABC transporter CR542_RS06205 PF01515 Phosphate acetyl/butaryl transferase CR542_RS06210 PF00849 RNA pseudouridylate synthase CR542_RS06215 PF01513 ATP-NAD kinase CR542_RS06220 PF04607 Region found in RelA / SpoT proteins CR542_RS06225 PF01928 CYTH domain CR542_RS06230 PF14572 Phosphoribosyl synthetase-associated domain CR542_RS06230 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CR542_RS06235 PF00266 Aminotransferase class-V CR542_RS06250 PF06971 Putative DNA-binding protein N-terminus CR542_RS06250 PF02629 CoA binding domain CR542_RS06255 PF07722 Peptidase C26 CR542_RS06260 PF04002 RadC-like JAB domain CR542_RS06265 PF04203 Sortase domain CR542_RS06270 PF00521 DNA gyrase/topoisomerase IV, subunit A CR542_RS06270 PF03989 DNA gyrase C-terminal domain, beta-propeller CR542_RS06275 PF00056 lactate/malate dehydrogenase, NAD binding domain CR542_RS06275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CR542_RS06280 PF01872 RibD C-terminal domain CR542_RS06290 PF01872 RibD C-terminal domain CR542_RS06295 PF02653 Branched-chain amino acid transport system / permease component CR542_RS06300 PF02653 Branched-chain amino acid transport system / permease component CR542_RS06305 PF00005 ABC transporter CR542_RS06310 PF02608 ABC transporter substrate-binding protein PnrA-like CR542_RS06315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CR542_RS06320 PF01791 DeoC/LacD family aldolase CR542_RS06325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CR542_RS06325 PF00591 Glycosyl transferase family, a/b domain CR542_RS06325 PF02885 Glycosyl transferase family, helical bundle domain CR542_RS06330 PF05175 Methyltransferase small domain CR542_RS06335 PF00485 Phosphoribulokinase / Uridine kinase family CR542_RS06340 PF01649 Ribosomal protein S20 CR542_RS06355 PF00512 His Kinase A (phospho-acceptor) domain CR542_RS06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS06360 PF00072 Response regulator receiver domain CR542_RS06360 PF00486 Transcriptional regulatory protein, C terminal CR542_RS06375 PF01895 PhoU domain CR542_RS06380 PF00005 ABC transporter CR542_RS06385 PF00005 ABC transporter CR542_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS06400 PF12849 PBP superfamily domain CR542_RS06405 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CR542_RS06405 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CR542_RS06405 PF01189 16S rRNA methyltransferase RsmB/F CR542_RS06410 PF00459 Inositol monophosphatase family CR542_RS06415 PF05256 Uncharacterised protein family (UPF0223) CR542_RS06420 PF03960 ArsC family CR542_RS06425 PF07885 Ion channel CR542_RS06430 PF06574 FAD synthetase CR542_RS06430 PF01687 Riboflavin kinase CR542_RS06435 PF01509 TruB family pseudouridylate synthase (N terminal domain) CR542_RS06435 PF16198 tRNA pseudouridylate synthase B C-terminal domain CR542_RS06480 PF07687 Peptidase dimerisation domain CR542_RS06480 PF01546 Peptidase family M20/M25/M40 CR542_RS06495 PF03551 Transcriptional regulator PadR-like family CR542_RS06510 PF06993 Protein of unknown function (DUF1304) CR542_RS06515 PF01047 MarR family CR542_RS06530 PF01545 Cation efflux family CR542_RS06530 PF16916 Dimerisation domain of Zinc Transporter CR542_RS06540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CR542_RS06545 PF02152 Dihydroneopterin aldolase CR542_RS06550 PF00809 Pterin binding enzyme CR542_RS06555 PF01227 GTP cyclohydrolase I CR542_RS06560 PF00293 NUDIX domain CR542_RS06585 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CR542_RS06585 PF01588 Putative tRNA binding domain CR542_RS06585 PF03147 Ferredoxin-fold anticodon binding domain CR542_RS06585 PF03483 B3/4 domain CR542_RS06585 PF03484 tRNA synthetase B5 domain CR542_RS06590 PF13673 Acetyltransferase (GNAT) domain CR542_RS06595 PF01409 tRNA synthetases class II core domain (F) CR542_RS06595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CR542_RS06600 PF00933 Glycosyl hydrolase family 3 N terminal domain CR542_RS06605 PF00933 Glycosyl hydrolase family 3 N terminal domain CR542_RS06615 PF00106 short chain dehydrogenase CR542_RS06620 PF03786 D-mannonate dehydratase (UxuA) CR542_RS06625 PF02614 Glucuronate isomerase CR542_RS06630 PF01081 KDPG and KHG aldolase CR542_RS06635 PF07729 FCD domain CR542_RS06635 PF00392 Bacterial regulatory proteins, gntR family CR542_RS06640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CR542_RS06640 PF02837 Glycosyl hydrolases family 2, sugar binding domain CR542_RS06640 PF00703 Glycosyl hydrolases family 2 CR542_RS06645 PF00294 pfkB family carbohydrate kinase CR542_RS06655 PF01223 DNA/RNA non-specific endonuclease CR542_RS06660 PF11772 DNA-directed RNA polymerase subunit beta CR542_RS06665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR542_RS06675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CR542_RS06675 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CR542_RS06680 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR542_RS06680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR542_RS06685 PF00231 ATP synthase CR542_RS06690 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR542_RS06690 PF00306 ATP synthase alpha/beta chain, C terminal domain CR542_RS06690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR542_RS06695 PF00213 ATP synthase delta (OSCP) subunit CR542_RS06700 PF00430 ATP synthase B/B' CF(0) CR542_RS06705 PF00119 ATP synthase A chain CR542_RS06710 PF00137 ATP synthase subunit C CR542_RS06715 PF00781 Diacylglycerol kinase catalytic domain CR542_RS06720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CR542_RS06720 PF00533 BRCA1 C Terminus (BRCT) domain CR542_RS06720 PF01653 NAD-dependent DNA ligase adenylation domain CR542_RS06720 PF03120 NAD-dependent DNA ligase OB-fold domain CR542_RS06720 PF12826 Helix-hairpin-helix motif CR542_RS06725 PF03773 Predicted permease CR542_RS06730 PF09323 Domain of unknown function (DUF1980) CR542_RS06735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CR542_RS06735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CR542_RS06750 PF00448 SRP54-type protein, GTPase domain CR542_RS06750 PF02881 SRP54-type protein, helical bundle domain CR542_RS06765 PF06470 SMC proteins Flexible Hinge Domain CR542_RS06765 PF02463 RecF/RecN/SMC N terminal domain CR542_RS06770 PF00035 Double-stranded RNA binding motif CR542_RS06770 PF14622 Ribonuclease-III-like CR542_RS06775 PF01168 Alanine racemase, N-terminal domain CR542_RS06775 PF00842 Alanine racemase, C-terminal domain CR542_RS06775 PF01757 Acyltransferase family CR542_RS06795 PF08903 Domain of unknown function (DUF1846) CR542_RS06800 PF02896 PEP-utilising enzyme, TIM barrel domain CR542_RS06800 PF05524 PEP-utilising enzyme, N-terminal CR542_RS06800 PF00391 PEP-utilising enzyme, mobile domain CR542_RS06805 PF00381 PTS HPr component phosphorylation site CR542_RS06810 PF00180 Isocitrate/isopropylmalate dehydrogenase CR542_RS06815 PF00285 Citrate synthase, C-terminal domain CR542_RS06820 PF00694 Aconitase C-terminal domain CR542_RS06820 PF00330 Aconitase family (aconitate hydratase) CR542_RS06825 PF00462 Glutaredoxin CR542_RS06830 PF00317 Ribonucleotide reductase, all-alpha domain CR542_RS06830 PF08343 Ribonucleotide reductase N-terminal CR542_RS06830 PF02867 Ribonucleotide reductase, barrel domain CR542_RS06835 PF00268 Ribonucleotide reductase, small chain CR542_RS06840 PF00356 Bacterial regulatory proteins, lacI family CR542_RS06855 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CR542_RS06855 PF02278 Polysaccharide lyase family 8, super-sandwich domain CR542_RS06855 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CR542_RS06865 PF03613 PTS system mannose/fructose/sorbose family IID component CR542_RS06875 PF03830 PTS system sorbose subfamily IIB component CR542_RS06880 PF07470 Glycosyl Hydrolase Family 88 CR542_RS06940 PF01381 Helix-turn-helix CR542_RS06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR542_RS06960 PF01411 tRNA synthetases class II (A) CR542_RS06960 PF02272 DHHA1 domain CR542_RS06970 PF13145 PPIC-type PPIASE domain CR542_RS06975 PF01596 O-methyltransferase CR542_RS06990 PF08439 Oligopeptidase F CR542_RS06990 PF01432 Peptidase family M3 CR542_RS07000 PF09334 tRNA synthetases class I (M) CR542_RS07000 PF01588 Putative tRNA binding domain CR542_RS07015 PF00793 DAHP synthetase I family CR542_RS07020 PF00793 DAHP synthetase I family CR542_RS07025 PF08501 Shikimate dehydrogenase substrate binding domain CR542_RS07025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CR542_RS07030 PF01761 3-dehydroquinate synthase CR542_RS07040 PF00005 ABC transporter CR542_RS07045 PF02653 Branched-chain amino acid transport system / permease component CR542_RS07065 PF01791 DeoC/LacD family aldolase CR542_RS07070 PF01979 Amidohydrolase family CR542_RS07080 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS07085 PF00005 ABC transporter CR542_RS07090 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS07095 PF01380 SIS domain CR542_RS07100 PF01610 Transposase CR542_RS07100 PF13683 Integrase core domain CR542_RS07105 PF10502 Signal peptidase, peptidase S26 CR542_RS07110 PF07859 alpha/beta hydrolase fold CR542_RS07110 PF13472 GDSL-like Lipase/Acylhydrolase family CR542_RS07115 PF01266 FAD dependent oxidoreductase CR542_RS07130 PF09028 Mac 1 CR542_RS07135 PF00224 Pyruvate kinase, barrel domain CR542_RS07135 PF02887 Pyruvate kinase, alpha/beta domain CR542_RS07140 PF00365 Phosphofructokinase CR542_RS07145 PF01336 OB-fold nucleic acid binding domain CR542_RS07145 PF14579 Helix-hairpin-helix motif CR542_RS07145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CR542_RS07145 PF07733 Bacterial DNA polymerase III alpha NTPase domain CR542_RS07145 PF02811 PHP domain CR542_RS07150 PF00392 Bacterial regulatory proteins, gntR family CR542_RS07150 PF07702 UTRA domain CR542_RS07155 PF00005 ABC transporter CR542_RS07165 PF00962 Adenosine/AMP deaminase CR542_RS07200 PF01883 Iron-sulfur cluster assembly protein CR542_RS07205 PF04539 Sigma-70 region 3 CR542_RS07205 PF03979 Sigma-70 factor, region 1.1 CR542_RS07205 PF04542 Sigma-70 region 2 CR542_RS07205 PF00140 Sigma-70 factor, region 1.2 CR542_RS07205 PF04545 Sigma-70, region 4 CR542_RS07210 PF08275 DNA primase catalytic core, N-terminal domain CR542_RS07210 PF10410 DnaB-helicase binding domain of primase CR542_RS07210 PF01807 CHC2 zinc finger CR542_RS07215 PF01741 Large-conductance mechanosensitive channel, MscL CR542_RS07225 PF16363 GDP-mannose 4,6 dehydratase CR542_RS07230 PF01165 Ribosomal protein S21 CR542_RS07240 PF13344 Haloacid dehalogenase-like hydrolase CR542_RS07245 PF00293 NUDIX domain CR542_RS07255 PF06969 HemN C-terminal domain CR542_RS07255 PF04055 Radical SAM superfamily CR542_RS07265 PF00343 Carbohydrate phosphorylase CR542_RS07270 PF01048 Phosphorylase superfamily CR542_RS07275 PF01048 Phosphorylase superfamily CR542_RS07285 PF01676 Metalloenzyme superfamily CR542_RS07290 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CR542_RS07300 PF09827 CRISPR associated protein Cas2 CR542_RS07305 PF01867 CRISPR associated protein Cas1 CR542_RS07315 PF01348 Type II intron maturase CR542_RS07315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS07325 PF10396 GTP-binding protein TrmE N-terminus CR542_RS07325 PF12631 MnmE helical domain CR542_RS07325 PF01926 50S ribosome-binding GTPase CR542_RS07340 PF15975 Flotillin CR542_RS07340 PF01145 SPFH domain / Band 7 family CR542_RS07345 PF04011 LemA family CR542_RS07355 PF03167 Uracil DNA glycosylase superfamily CR542_RS07365 PF01546 Peptidase family M20/M25/M40 CR542_RS07375 PF00375 Sodium:dicarboxylate symporter family CR542_RS07385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS07385 PF01348 Type II intron maturase CR542_RS07395 PF00005 ABC transporter CR542_RS07395 PF12848 ABC transporter CR542_RS07400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR542_RS07400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR542_RS07400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR542_RS07400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR542_RS07410 PF02457 DisA bacterial checkpoint controller nucleotide-binding CR542_RS07415 PF08245 Mur ligase middle domain CR542_RS07415 PF08353 Domain of unknown function (DUF1727) CR542_RS07420 PF07685 CobB/CobQ-like glutamine amidotransferase domain CR542_RS07425 PF13847 Methyltransferase domain CR542_RS07435 PF12848 ABC transporter CR542_RS07435 PF16326 ABC transporter C-terminal domain CR542_RS07435 PF00005 ABC transporter CR542_RS07450 PF00756 Putative esterase CR542_RS07455 PF17770 Ribonuclease J C-terminal domain CR542_RS07455 PF00753 Metallo-beta-lactamase superfamily CR542_RS07455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CR542_RS07470 PF08402 TOBE domain CR542_RS07470 PF00005 ABC transporter CR542_RS07485 PF00232 Glycosyl hydrolase family 1 CR542_RS07490 PF02378 Phosphotransferase system, EIIC CR542_RS07490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR542_RS07490 PF00367 phosphotransferase system, EIIB CR542_RS07495 PF00874 PRD domain CR542_RS07495 PF03123 CAT RNA binding domain CR542_RS07500 PF05670 NFACT protein RNA binding domain CR542_RS07505 PF03306 Alpha-acetolactate decarboxylase CR542_RS07515 PF01594 AI-2E family transporter CR542_RS07520 PF10282 Lactonase, 7-bladed beta-propeller CR542_RS07530 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS07625 PF03952 Enolase, N-terminal domain CR542_RS07625 PF00113 Enolase, C-terminal TIM barrel domain CR542_RS07640 PF02595 Glycerate kinase family CR542_RS07645 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS07655 PF06160 Septation ring formation regulator, EzrA CR542_RS07660 PF00204 DNA gyrase B CR542_RS07660 PF00986 DNA gyrase B subunit, carboxyl terminus CR542_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS07660 PF01751 Toprim domain CR542_RS07665 PF01965 DJ-1/PfpI family CR542_RS07670 PF01098 Cell cycle protein CR542_RS07680 PF06855 YozE SAM-like fold CR542_RS07690 PF02558 Ketopantoate reductase PanE/ApbA CR542_RS07690 PF08546 Ketopantoate reductase PanE/ApbA C terminal CR542_RS07695 PF17783 CvfB-like winged helix domain CR542_RS07695 PF13509 S1 domain CR542_RS07700 PF01765 Ribosome recycling factor CR542_RS07705 PF00696 Amino acid kinase family CR542_RS07710 PF01943 Polysaccharide biosynthesis protein CR542_RS07710 PF14667 Polysaccharide biosynthesis C-terminal domain CR542_RS07720 PF02798 Glutathione S-transferase, N-terminal domain CR542_RS07730 PF00687 Ribosomal protein L1p/L10e family CR542_RS07735 PF03946 Ribosomal protein L11, N-terminal domain CR542_RS07735 PF00298 Ribosomal protein L11, RNA binding domain CR542_RS07745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CR542_RS07750 PF01580 FtsK/SpoIIIE family CR542_RS07750 PF17854 FtsK alpha domain CR542_RS07750 PF09397 Ftsk gamma domain CR542_RS07755 PF00251 Glycosyl hydrolases family 32 N-terminal domain CR542_RS07755 PF08244 Glycosyl hydrolases family 32 C terminal CR542_RS07770 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS07780 PF00356 Bacterial regulatory proteins, lacI family CR542_RS07800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR542_RS07805 PF13683 Integrase core domain CR542_RS07805 PF01610 Transposase CR542_RS07810 PF16658 Class II release factor RF3, C-terminal domain CR542_RS07810 PF00009 Elongation factor Tu GTP binding domain CR542_RS07810 PF03144 Elongation factor Tu domain 2 CR542_RS07825 PF01225 Mur ligase family, catalytic domain CR542_RS07825 PF08245 Mur ligase middle domain CR542_RS07825 PF02875 Mur ligase family, glutamate ligase domain CR542_RS07835 PF00005 ABC transporter CR542_RS07840 PF02687 FtsX-like permease family CR542_RS07850 PF07478 D-ala D-ala ligase C-terminus CR542_RS07850 PF01820 D-ala D-ala ligase N-terminus CR542_RS07855 PF13662 Toprim domain CR542_RS07855 PF02132 RecR protein CR542_RS07860 PF00905 Penicillin binding protein transpeptidase domain CR542_RS07860 PF03717 Penicillin-binding Protein dimerisation domain CR542_RS07865 PF12848 ABC transporter CR542_RS07865 PF00005 ABC transporter CR542_RS07880 PF00753 Metallo-beta-lactamase superfamily CR542_RS07885 PF13426 PAS domain CR542_RS07885 PF00512 His Kinase A (phospho-acceptor) domain CR542_RS07885 PF00672 HAMP domain CR542_RS07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS07890 PF00072 Response regulator receiver domain CR542_RS07890 PF00486 Transcriptional regulatory protein, C terminal CR542_RS07895 PF00005 ABC transporter CR542_RS07900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS07910 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS07915 PF02824 TGS domain CR542_RS07915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR542_RS07915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR542_RS07915 PF03129 Anticodon binding domain CR542_RS07930 PF13439 Glycosyltransferase Family 4 CR542_RS07930 PF00534 Glycosyl transferases group 1 CR542_RS07935 PF00534 Glycosyl transferases group 1 CR542_RS07935 PF13439 Glycosyltransferase Family 4 CR542_RS07945 PF00356 Bacterial regulatory proteins, lacI family CR542_RS07950 PF01321 Creatinase/Prolidase N-terminal domain CR542_RS07950 PF00557 Metallopeptidase family M24 CR542_RS07960 PF01702 Queuine tRNA-ribosyltransferase CR542_RS07970 PF13380 CoA binding domain CR542_RS07980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CR542_RS07980 PF01367 5'-3' exonuclease, C-terminal SAM fold CR542_RS07980 PF00476 DNA polymerase family A CR542_RS07990 PF01548 Transposase CR542_RS07990 PF02371 Transposase IS116/IS110/IS902 family CR542_RS08000 PF05175 Methyltransferase small domain CR542_RS08005 PF01541 GIY-YIG catalytic domain CR542_RS08010 PF02525 Flavodoxin-like fold CR542_RS08025 PF01022 Bacterial regulatory protein, arsR family CR542_RS08030 PF00271 Helicase conserved C-terminal domain CR542_RS08030 PF00270 DEAD/DEAH box helicase CR542_RS08040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR542_RS08040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR542_RS08045 PF08000 Bacterial PH domain CR542_RS08070 PF13683 Integrase core domain CR542_RS08070 PF01610 Transposase CR542_RS08075 PF01048 Phosphorylase superfamily CR542_RS08085 PF00293 NUDIX domain CR542_RS08090 PF12804 MobA-like NTP transferase domain CR542_RS08090 PF14602 Hexapeptide repeat of succinyl-transferase CR542_RS08090 PF00132 Bacterial transferase hexapeptide (six repeats) CR542_RS08100 PF13302 Acetyltransferase (GNAT) domain CR542_RS08135 PF00005 ABC transporter CR542_RS08145 PF00072 Response regulator receiver domain CR542_RS08145 PF00486 Transcriptional regulatory protein, C terminal CR542_RS08155 PF00155 Aminotransferase class I and II CR542_RS08165 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS08170 PF00005 ABC transporter CR542_RS08170 PF00571 CBS domain CR542_RS08190 PF01790 Prolipoprotein diacylglyceryl transferase CR542_RS08195 PF02603 HPr Serine kinase N terminus CR542_RS08195 PF07475 HPr Serine kinase C-terminal domain CR542_RS08200 PF01238 Phosphomannose isomerase type I CR542_RS08215 PF17283 SprT-like zinc ribbon domain CR542_RS08215 PF10263 SprT-like family CR542_RS08220 PF09371 Tex-like protein N-terminal domain CR542_RS08220 PF00575 S1 RNA binding domain CR542_RS08220 PF17674 HHH domain CR542_RS08220 PF16921 Tex protein YqgF-like domain CR542_RS08230 PF18002 T6 antigen Ig like domain CR542_RS08230 PF17802 Prealbumin-like fold domain CR542_RS08230 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain CR542_RS08230 PF00746 LPXTG cell wall anchor motif CR542_RS08240 PF00248 Aldo/keto reductase family CR542_RS08245 PF06177 QueT transporter CR542_RS08250 PF04138 GtrA-like protein CR542_RS08260 PF00557 Metallopeptidase family M24 CR542_RS08270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR542_RS08275 PF02525 Flavodoxin-like fold CR542_RS08280 PF02773 S-adenosylmethionine synthetase, C-terminal domain CR542_RS08280 PF00438 S-adenosylmethionine synthetase, N-terminal domain CR542_RS08280 PF02772 S-adenosylmethionine synthetase, central domain CR542_RS08290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CR542_RS08310 PF05343 M42 glutamyl aminopeptidase CR542_RS08325 PF12169 DNA polymerase III subunits gamma and tau domain III CR542_RS08330 PF13185 GAF domain CR542_RS08345 PF00485 Phosphoribulokinase / Uridine kinase family CR542_RS08350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CR542_RS08355 PF00270 DEAD/DEAH box helicase CR542_RS08355 PF00271 Helicase conserved C-terminal domain CR542_RS08360 PF01522 Polysaccharide deacetylase CR542_RS08360 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CR542_RS08370 PF00300 Histidine phosphatase superfamily (branch 1) CR542_RS08375 PF00108 Thiolase, N-terminal domain CR542_RS08375 PF02803 Thiolase, C-terminal domain CR542_RS08380 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CR542_RS08380 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CR542_RS08385 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CR542_RS08400 PF13683 Integrase core domain CR542_RS08400 PF01610 Transposase CR542_RS08405 PF00216 Bacterial DNA-binding protein CR542_RS08415 PF13472 GDSL-like Lipase/Acylhydrolase family CR542_RS08420 PF02645 Uncharacterised protein, DegV family COG1307 CR542_RS08425 PF13476 AAA domain CR542_RS08430 PF01316 Arginine repressor, DNA binding domain CR542_RS08430 PF02863 Arginine repressor, C-terminal domain CR542_RS08435 PF01479 S4 domain CR542_RS08435 PF01728 FtsJ-like methyltransferase CR542_RS08440 PF00348 Polyprenyl synthetase CR542_RS08445 PF02609 Exonuclease VII small subunit CR542_RS08450 PF13742 OB-fold nucleic acid binding domain CR542_RS08450 PF02601 Exonuclease VII, large subunit CR542_RS08455 PF04228 Putative neutral zinc metallopeptidase CR542_RS08460 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CR542_RS08465 PF00512 His Kinase A (phospho-acceptor) domain CR542_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR542_RS08465 PF00672 HAMP domain CR542_RS08470 PF00072 Response regulator receiver domain CR542_RS08470 PF00486 Transcriptional regulatory protein, C terminal CR542_RS08495 PF02833 DHHA2 domain CR542_RS08495 PF01368 DHH family CR542_RS08505 PF04055 Radical SAM superfamily CR542_RS08510 PF00571 CBS domain CR542_RS08510 PF01595 Cyclin M transmembrane N-terminal domain CR542_RS08510 PF03471 Transporter associated domain CR542_RS08515 PF00005 ABC transporter CR542_RS08520 PF06962 Putative rRNA methylase CR542_RS08530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CR542_RS08530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CR542_RS08530 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CR542_RS08535 PF02540 NAD synthase CR542_RS08545 PF04055 Radical SAM superfamily CR542_RS08550 PF06265 Protein of unknown function (DUF1027) CR542_RS08555 PF13180 PDZ domain CR542_RS08555 PF05362 Lon protease (S16) C-terminal proteolytic domain CR542_RS08560 PF01467 Cytidylyltransferase-like CR542_RS08575 PF00581 Rhodanese-like domain CR542_RS08580 PF06014 Bacterial protein of unknown function (DUF910) CR542_RS08585 PF00196 Bacterial regulatory proteins, luxR family CR542_RS08585 PF00072 Response regulator receiver domain CR542_RS08590 PF13185 GAF domain CR542_RS08590 PF07730 Histidine kinase CR542_RS08600 PF00005 ABC transporter CR542_RS08610 PF00210 Ferritin-like domain CR542_RS08615 PF05532 CsbD-like CR542_RS08620 PF01451 Low molecular weight phosphotyrosine protein phosphatase CR542_RS08630 PF01757 Acyltransferase family CR542_RS08635 PF01569 PAP2 superfamily CR542_RS08640 PF12822 ECF transporter, substrate-specific component CR542_RS08645 PF00588 SpoU rRNA Methylase family CR542_RS08655 PF01809 Putative membrane protein insertion efficiency factor CR542_RS08660 PF01479 S4 domain CR542_RS08660 PF00849 RNA pseudouridylate synthase CR542_RS08665 PF04079 Segregation and condensation complex subunit ScpB CR542_RS08670 PF02616 Segregation and condensation protein ScpA CR542_RS08675 PF00589 Phage integrase family CR542_RS08690 PF01725 Ham1 family CR542_RS08695 PF01177 Asp/Glu/Hydantoin racemase CR542_RS08700 PF03672 Uncharacterised protein family (UPF0154) CR542_RS08705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CR542_RS08705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CR542_RS08710 PF03051 Peptidase C1-like family CR542_RS08715 PF01027 Inhibitor of apoptosis-promoting Bax1 CR542_RS08725 PF00588 SpoU rRNA Methylase family CR542_RS08725 PF08032 RNA 2'-O ribose methyltransferase substrate binding CR542_RS08730 PF00708 Acylphosphatase CR542_RS08735 PF02096 60Kd inner membrane protein CR542_RS08740 PF01272 Transcription elongation factor, GreA/GreB, C-term CR542_RS08740 PF03449 Transcription elongation factor, N-terminal CR542_RS08745 PF02618 YceG-like family CR542_RS08755 PF01225 Mur ligase family, catalytic domain CR542_RS08755 PF08245 Mur ligase middle domain CR542_RS08755 PF02875 Mur ligase family, glutamate ligase domain CR542_RS08765 PF04434 SWIM zinc finger CR542_RS08765 PF00271 Helicase conserved C-terminal domain CR542_RS08765 PF00176 SNF2 family N-terminal domain CR542_RS08780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CR542_RS08780 PF01926 50S ribosome-binding GTPase CR542_RS08785 PF00881 Nitroreductase family CR542_RS08790 PF01695 IstB-like ATP binding protein CR542_RS08790 PF07319 Primosomal protein DnaI N-terminus CR542_RS08800 PF03477 ATP cone domain CR542_RS08805 PF01594 AI-2E family transporter CR542_RS08810 PF00486 Transcriptional regulatory protein, C terminal CR542_RS08810 PF00072 Response regulator receiver domain CR542_RS08815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CR542_RS08815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CR542_RS08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS08835 PF00270 DEAD/DEAH box helicase CR542_RS08835 PF00271 Helicase conserved C-terminal domain CR542_RS08855 PF00953 Glycosyl transferase family 4 CR542_RS08855 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CR542_RS08860 PF03793 PASTA domain CR542_RS08860 PF03717 Penicillin-binding Protein dimerisation domain CR542_RS08860 PF00905 Penicillin binding protein transpeptidase domain CR542_RS08870 PF01795 MraW methylase family CR542_RS08920 PF02424 ApbE family CR542_RS08925 PF04205 FMN-binding domain CR542_RS08930 PF00348 Polyprenyl synthetase CR542_RS08935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS08950 PF02386 Cation transport protein CR542_RS08955 PF02254 TrkA-N domain CR542_RS08955 PF02080 TrkA-C domain CR542_RS08960 PF01554 MatE CR542_RS08970 PF05979 Bacterial protein of unknown function (DUF896) CR542_RS08975 PF02092 Glycyl-tRNA synthetase beta subunit CR542_RS08980 PF02091 Glycyl-tRNA synthetase alpha subunit CR542_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS09000 PF00005 ABC transporter CR542_RS09000 PF09383 NIL domain CR542_RS09005 PF01546 Peptidase family M20/M25/M40 CR542_RS09005 PF07687 Peptidase dimerisation domain CR542_RS09010 PF03180 NLPA lipoprotein CR542_RS09015 PF07722 Peptidase C26 CR542_RS09020 PF08267 Cobalamin-independent synthase, N-terminal domain CR542_RS09020 PF01717 Cobalamin-independent synthase, Catalytic domain CR542_RS09025 PF02219 Methylenetetrahydrofolate reductase CR542_RS09040 PF03610 PTS system fructose IIA component CR542_RS09040 PF03830 PTS system sorbose subfamily IIB component CR542_RS09045 PF03609 PTS system sorbose-specific iic component CR542_RS09050 PF03613 PTS system mannose/fructose/sorbose family IID component CR542_RS09060 PF02403 Seryl-tRNA synthetase N-terminal domain CR542_RS09060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR542_RS09065 PF02384 N-6 DNA Methylase CR542_RS09065 PF12161 HsdM N-terminal domain CR542_RS09075 PF12728 Helix-turn-helix domain CR542_RS09075 PF02661 Fic/DOC family CR542_RS09085 PF18766 SWI2/SNF2 ATPase CR542_RS09085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CR542_RS09085 PF12008 Type I restriction and modification enzyme - subunit R C terminal CR542_RS09370 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CR542_RS09375 PF01039 Carboxyl transferase domain CR542_RS09380 PF00289 Biotin carboxylase, N-terminal domain CR542_RS09380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR542_RS09380 PF02785 Biotin carboxylase C-terminal domain CR542_RS09390 PF07977 FabA-like domain CR542_RS09395 PF00364 Biotin-requiring enzyme CR542_RS09400 PF02801 Beta-ketoacyl synthase, C-terminal domain CR542_RS09400 PF00109 Beta-ketoacyl synthase, N-terminal domain CR542_RS09415 PF00698 Acyl transferase domain CR542_RS09420 PF03060 Nitronate monooxygenase CR542_RS09425 PF00550 Phosphopantetheine attachment site CR542_RS09430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CR542_RS09430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CR542_RS09440 PF00378 Enoyl-CoA hydratase/isomerase CR542_RS09445 PF13419 Haloacid dehalogenase-like hydrolase CR542_RS09450 PF00696 Amino acid kinase family CR542_RS09450 PF13840 ACT domain CR542_RS09465 PF01168 Alanine racemase, N-terminal domain CR542_RS09465 PF00842 Alanine racemase, C-terminal domain CR542_RS09470 PF01648 4'-phosphopantetheinyl transferase superfamily CR542_RS09475 PF07516 SecA Wing and Scaffold domain CR542_RS09475 PF01043 SecA preprotein cross-linking domain CR542_RS09475 PF02810 SEC-C motif CR542_RS09475 PF07517 SecA DEAD-like domain CR542_RS09485 PF00480 ROK family CR542_RS09490 PF02378 Phosphotransferase system, EIIC CR542_RS09490 PF00367 phosphotransferase system, EIIB CR542_RS09490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR542_RS09495 PF00251 Glycosyl hydrolases family 32 N-terminal domain CR542_RS09495 PF08244 Glycosyl hydrolases family 32 C terminal CR542_RS09500 PF00356 Bacterial regulatory proteins, lacI family CR542_RS09505 PF01029 NusB family CR542_RS09510 PF03780 Asp23 family, cell envelope-related function CR542_RS09515 PF09285 Elongation factor P, C-terminal CR542_RS09515 PF08207 Elongation factor P (EF-P) KOW-like domain CR542_RS09515 PF01132 Elongation factor P (EF-P) OB domain CR542_RS09520 PF01321 Creatinase/Prolidase N-terminal domain CR542_RS09520 PF00557 Metallopeptidase family M24 CR542_RS09525 PF17760 UvrA interaction domain CR542_RS09525 PF17755 UvrA DNA-binding domain CR542_RS09525 PF00005 ABC transporter CR542_RS09540 PF01084 Ribosomal protein S18 CR542_RS09545 PF00436 Single-strand binding protein family CR542_RS09550 PF01250 Ribosomal protein S6 CR542_RS09555 PF10437 Bacterial lipoate protein ligase C-terminus CR542_RS09555 PF03099 Biotin/lipoate A/B protein ligase family CR542_RS09560 PF00232 Glycosyl hydrolase family 1 CR542_RS09565 PF00300 Histidine phosphatase superfamily (branch 1) CR542_RS09570 PF00300 Histidine phosphatase superfamily (branch 1) CR542_RS09575 PF00232 Glycosyl hydrolase family 1 CR542_RS09580 PF02378 Phosphotransferase system, EIIC CR542_RS09590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS09600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS09610 PF04193 PQ loop repeat CR542_RS09615 PF00232 Glycosyl hydrolase family 1 CR542_RS09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CR542_RS09625 PF00232 Glycosyl hydrolase family 1 CR542_RS09630 PF12833 Helix-turn-helix domain CR542_RS09630 PF02311 AraC-like ligand binding domain CR542_RS09640 PF00367 phosphotransferase system, EIIB CR542_RS09640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CR542_RS09640 PF02378 Phosphotransferase system, EIIC CR542_RS09645 PF00874 PRD domain CR542_RS09645 PF03123 CAT RNA binding domain CR542_RS09655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS09655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR542_RS09660 PF02817 e3 binding domain CR542_RS09660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CR542_RS09660 PF00364 Biotin-requiring enzyme CR542_RS09665 PF00364 Biotin-requiring enzyme CR542_RS09665 PF02779 Transketolase, pyrimidine binding domain CR542_RS09665 PF02780 Transketolase, C-terminal domain CR542_RS09670 PF00676 Dehydrogenase E1 component CR542_RS09675 PF03458 UPF0126 domain CR542_RS09680 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 CR542_RS09690 PF02033 Ribosome-binding factor A CR542_RS09695 PF04760 Translation initiation factor IF-2, N-terminal region CR542_RS09695 PF11987 Translation-initiation factor 2 CR542_RS09695 PF00009 Elongation factor Tu GTP binding domain CR542_RS09700 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CR542_RS09705 PF04296 Protein of unknown function (DUF448) CR542_RS09710 PF00575 S1 RNA binding domain CR542_RS09710 PF08529 NusA N-terminal domain CR542_RS09710 PF13184 NusA-like KH domain CR542_RS09715 PF02576 RimP N-terminal domain CR542_RS09715 PF17384 RimP C-terminal SH3 domain CR542_RS09720 PF02390 Putative methyltransferase CR542_RS09730 PF05975 Bacterial ABC transporter protein EcsB CR542_RS09735 PF00005 ABC transporter CR542_RS09740 PF01230 HIT domain CR542_RS09750 PF03816 Cell envelope-related transcriptional attenuator domain CR542_RS09760 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CR542_RS09765 PF02734 DAK2 domain CR542_RS09765 PF13684 Dihydroxyacetone kinase family CR542_RS09770 PF03780 Asp23 family, cell envelope-related function CR542_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS09785 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS09790 PF00005 ABC transporter CR542_RS09790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CR542_RS09795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CR542_RS09795 PF00005 ABC transporter CR542_RS09800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CR542_RS09805 PF07943 Penicillin-binding protein 5, C-terminal domain CR542_RS09805 PF00768 D-alanyl-D-alanine carboxypeptidase CR542_RS09810 PF01458 Uncharacterized protein family (UPF0051) CR542_RS09815 PF01592 NifU-like N terminal domain CR542_RS09820 PF00266 Aminotransferase class-V CR542_RS09825 PF01458 Uncharacterized protein family (UPF0051) CR542_RS09830 PF00005 ABC transporter CR542_RS09835 PF00953 Glycosyl transferase family 4 CR542_RS09840 PF05389 Negative regulator of genetic competence (MecA) CR542_RS09845 PF02673 Bacitracin resistance protein BacA CR542_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS09855 PF00005 ABC transporter CR542_RS09870 PF00291 Pyridoxal-phosphate dependent enzyme CR542_RS09870 PF00585 C-terminal regulatory domain of Threonine dehydratase CR542_RS09875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CR542_RS09875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CR542_RS09880 PF10369 Small subunit of acetolactate synthase CR542_RS09880 PF01842 ACT domain CR542_RS09885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CR542_RS09885 PF00205 Thiamine pyrophosphate enzyme, central domain CR542_RS09885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CR542_RS09905 PF00920 Dehydratase family CR542_RS09920 PF01348 Type II intron maturase CR542_RS09920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CR542_RS09945 PF17191 RecG wedge domain CR542_RS09945 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CR542_RS09945 PF00270 DEAD/DEAH box helicase CR542_RS09950 PF01381 Helix-turn-helix CR542_RS09950 PF08671 Anti-repressor SinI CR542_RS09975 PF00380 Ribosomal protein S9/S16 CR542_RS09980 PF00572 Ribosomal protein L13 CR542_RS09990 PF02645 Uncharacterised protein, DegV family COG1307 CR542_RS10000 PF00588 SpoU rRNA Methylase family CR542_RS10000 PF08032 RNA 2'-O ribose methyltransferase substrate binding CR542_RS10015 PF00005 ABC transporter CR542_RS10015 PF17912 MalK OB fold domain CR542_RS10015 PF03459 TOBE domain CR542_RS10020 PF13556 PucR C-terminal helix-turn-helix domain CR542_RS10025 PF00636 Ribonuclease III domain CR542_RS10030 PF09190 DALR domain CR542_RS10030 PF01406 tRNA synthetases class I (C) catalytic domain CR542_RS10045 PF00132 Bacterial transferase hexapeptide (six repeats) CR542_RS10045 PF06426 Serine acetyltransferase, N-terminal CR542_RS10050 PF00013 KH domain CR542_RS10050 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CR542_RS10050 PF01138 3' exoribonuclease family, domain 1 CR542_RS10050 PF03725 3' exoribonuclease family, domain 2 CR542_RS10050 PF00575 S1 RNA binding domain CR542_RS10060 PF00312 Ribosomal protein S15 CR542_RS10065 PF00005 ABC transporter CR542_RS10090 PF00860 Permease family CR542_RS10110 PF00849 RNA pseudouridylate synthase CR542_RS10110 PF01479 S4 domain CR542_RS10130 PF01327 Polypeptide deformylase CR542_RS10140 PF00694 Aconitase C-terminal domain CR542_RS10145 PF00330 Aconitase family (aconitate hydratase) CR542_RS10150 PF00180 Isocitrate/isopropylmalate dehydrogenase CR542_RS10155 PF08502 LeuA allosteric (dimerisation) domain CR542_RS10155 PF00682 HMGL-like CR542_RS10160 PF02378 Phosphotransferase system, EIIC CR542_RS10170 PF00392 Bacterial regulatory proteins, gntR family CR542_RS10170 PF07702 UTRA domain CR542_RS10175 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS10180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS10190 PF02073 Thermophilic metalloprotease (M29) CR542_RS10210 PF11490 DNA polymerase III polC-type N-terminus II CR542_RS10210 PF07733 Bacterial DNA polymerase III alpha NTPase domain CR542_RS10210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CR542_RS10210 PF02811 PHP domain CR542_RS10210 PF00929 Exonuclease CR542_RS10210 PF14480 DNA polymerase III polC-type N-terminus I CR542_RS10215 PF02733 Dak1 domain CR542_RS10225 PF02733 Dak1 domain CR542_RS10230 PF02734 DAK2 domain CR542_RS10235 PF03610 PTS system fructose IIA component CR542_RS10240 PF00230 Major intrinsic protein CR542_RS10245 PF04073 Aminoacyl-tRNA editing domain CR542_RS10245 PF03129 Anticodon binding domain CR542_RS10245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR542_RS10250 PF13180 PDZ domain CR542_RS10250 PF02163 Peptidase family M50 CR542_RS10260 PF01255 Putative undecaprenyl diphosphate synthase CR542_RS10265 PF02699 Preprotein translocase subunit CR542_RS10270 PF00709 Adenylosuccinate synthetase CR542_RS10275 PF04262 Glutamate-cysteine ligase CR542_RS10275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CR542_RS10275 PF18419 ATP-grasp-like domain CR542_RS10285 PF01430 Hsp33 protein CR542_RS10290 PF01207 Dihydrouridine synthase (Dus) CR542_RS10295 PF01467 Cytidylyltransferase-like CR542_RS10300 PF00004 ATPase family associated with various cellular activities (AAA) CR542_RS10300 PF07724 AAA domain (Cdc48 subfamily) CR542_RS10300 PF17871 AAA lid domain CR542_RS10300 PF02861 Clp amino terminal domain, pathogenicity island component CR542_RS10300 PF10431 C-terminal, D2-small domain, of ClpB protein CR542_RS10305 PF17727 CtsR C-terminal dimerization domain CR542_RS10305 PF05848 CtsR N-terminal HTH domain CR542_RS10315 PF01476 LysM domain CR542_RS10315 PF05737 Collagen binding domain CR542_RS10315 PF17961 Bacterial Ig domain CR542_RS10325 PF02463 RecF/RecN/SMC N terminal domain CR542_RS10335 PF00589 Phage integrase family CR542_RS10335 PF14659 Phage integrase, N-terminal SAM-like domain CR542_RS10415 PF05193 Peptidase M16 inactive domain CR542_RS10420 PF05193 Peptidase M16 inactive domain CR542_RS10420 PF00675 Insulinase (Peptidase family M16) CR542_RS10425 PF13464 Domain of unknown function (DUF4115) CR542_RS10430 PF01066 CDP-alcohol phosphatidyltransferase CR542_RS10435 PF00005 ABC transporter CR542_RS10440 PF00005 ABC transporter CR542_RS10445 PF02361 Cobalt transport protein CR542_RS10455 PF03313 Serine dehydratase alpha chain CR542_RS10460 PF01842 ACT domain CR542_RS10460 PF03315 Serine dehydratase beta chain CR542_RS10475 PF01638 HxlR-like helix-turn-helix CR542_RS10480 PF00293 NUDIX domain CR542_RS10485 PF01134 Glucose inhibited division protein A CR542_RS10485 PF13932 GidA associated domain CR542_RS10490 PF01368 DHH family CR542_RS10490 PF02272 DHHA1 domain CR542_RS10495 PF03948 Ribosomal protein L9, C-terminal domain CR542_RS10495 PF01281 Ribosomal protein L9, N-terminal domain CR542_RS10500 PF00772 DnaB-like helicase N terminal domain CR542_RS10500 PF03796 DnaB-like helicase C terminal domain CR542_RS10510 PF00163 Ribosomal protein S4/S9 N-terminal domain CR542_RS10510 PF01479 S4 domain CR542_RS10520 PF00890 FAD binding domain CR542_RS10520 PF14537 Cytochrome c3 CR542_RS10530 PF00535 Glycosyl transferase family 2 CR542_RS10535 PF00248 Aldo/keto reductase family CR542_RS10540 PF13673 Acetyltransferase (GNAT) domain CR542_RS10545 PF00152 tRNA synthetases class II (D, K and N) CR542_RS10545 PF02938 GAD domain CR542_RS10545 PF01336 OB-fold nucleic acid binding domain CR542_RS10550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR542_RS10550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR542_RS10555 PF07972 NrdI Flavodoxin like CR542_RS10560 PF17999 Pullulanase N1-terminal domain CR542_RS10560 PF00128 Alpha amylase, catalytic domain CR542_RS10560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR542_RS10565 PF00356 Bacterial regulatory proteins, lacI family CR542_RS10565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CR542_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS10585 PF13416 Bacterial extracellular solute-binding protein CR542_RS10590 PF02446 4-alpha-glucanotransferase CR542_RS10610 PF05746 DALR anticodon binding domain CR542_RS10610 PF00750 tRNA synthetases class I (R) CR542_RS10610 PF03485 Arginyl tRNA synthetase N terminal domain CR542_RS10615 PF01316 Arginine repressor, DNA binding domain CR542_RS10615 PF02863 Arginine repressor, C-terminal domain CR542_RS10620 PF00488 MutS domain V CR542_RS10620 PF05192 MutS domain III CR542_RS10620 PF05190 MutS family domain IV CR542_RS10620 PF05188 MutS domain II CR542_RS10620 PF01624 MutS domain I CR542_RS10635 PF07722 Peptidase C26 CR542_RS10640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS10645 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS10650 PF00005 ABC transporter CR542_RS10655 PF03477 ATP cone domain CR542_RS10655 PF13597 Anaerobic ribonucleoside-triphosphate reductase CR542_RS10665 PF02872 5'-nucleotidase, C-terminal domain CR542_RS10665 PF00149 Calcineurin-like phosphoesterase CR542_RS10695 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR542_RS10695 PF12002 MgsA AAA+ ATPase C terminal CR542_RS10695 PF16193 AAA C-terminal domain CR542_RS10715 PF04452 RNA methyltransferase CR542_RS10740 PF02872 5'-nucleotidase, C-terminal domain CR542_RS10740 PF00149 Calcineurin-like phosphoesterase CR542_RS10745 PF02824 TGS domain CR542_RS10745 PF04607 Region found in RelA / SpoT proteins CR542_RS10745 PF13291 ACT domain CR542_RS10750 PF02580 D-Tyr-tRNA(Tyr) deacylase CR542_RS10770 PF01297 Zinc-uptake complex component A periplasmic CR542_RS10785 PF00005 ABC transporter CR542_RS10790 PF00950 ABC 3 transport family CR542_RS10795 PF00950 ABC 3 transport family CR542_RS10800 PF05649 Peptidase family M13 CR542_RS10800 PF01431 Peptidase family M13 CR542_RS10805 PF13603 Leucyl-tRNA synthetase, Domain 2 CR542_RS10805 PF08264 Anticodon-binding domain of tRNA CR542_RS10805 PF00133 tRNA synthetases class I (I, L, M and V) CR542_RS10805 PF09334 tRNA synthetases class I (M) CR542_RS10810 PF02056 Family 4 glycosyl hydrolase CR542_RS10810 PF11975 Family 4 glycosyl hydrolase C-terminal domain CR542_RS10815 PF00232 Glycosyl hydrolase family 1 CR542_RS10825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR542_RS10825 PF00874 PRD domain CR542_RS10825 PF08279 HTH domain CR542_RS10825 PF05043 Mga helix-turn-helix domain CR542_RS10830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS10835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CR542_RS10845 PF02378 Phosphotransferase system, EIIC CR542_RS10850 PF01476 LysM domain CR542_RS10850 PF05257 CHAP domain CR542_RS10855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR542_RS10860 PF00528 Binding-protein-dependent transport system inner membrane component CR542_RS10865 PF00005 ABC transporter CR542_RS10870 PF00356 Bacterial regulatory proteins, lacI family CR542_RS10875 PF00128 Alpha amylase, catalytic domain CR542_RS10875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CR542_RS10875 PF17999 Pullulanase N1-terminal domain CR542_RS10880 PF03611 PTS system sugar-specific permease component CR542_RS10885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CR542_RS10890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CR542_RS10895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CR542_RS10900 PF01261 Xylose isomerase-like TIM barrel CR542_RS10905 PF00596 Class II Aldolase and Adducin N-terminal domain CR542_RS10925 PF02779 Transketolase, pyrimidine binding domain CR542_RS10925 PF00456 Transketolase, thiamine diphosphate binding domain CR542_RS10925 PF02780 Transketolase, C-terminal domain CR542_RS10930 PF14437 MafB19-like deaminase CR542_RS10945 PF00342 Phosphoglucose isomerase CR542_RS10950 PF00149 Calcineurin-like phosphoesterase CR542_RS10960 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CR542_RS10960 PF00132 Bacterial transferase hexapeptide (six repeats) CR542_RS10960 PF14602 Hexapeptide repeat of succinyl-transferase CR542_RS10965 PF01546 Peptidase family M20/M25/M40 CR542_RS10965 PF07687 Peptidase dimerisation domain CR542_RS10970 PF01812 5-formyltetrahydrofolate cyclo-ligase family CR542_RS10975 PF01694 Rhomboid family CR542_RS10980 PF00483 Nucleotidyl transferase CR542_RS10985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CR542_RS10985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CR542_RS10995 PF00664 ABC transporter transmembrane region CR542_RS10995 PF00005 ABC transporter CR542_RS11000 PF00005 ABC transporter CR542_RS11000 PF00664 ABC transporter transmembrane region CR542_RS11065 PF01381 Helix-turn-helix CR542_RS11075 PF00589 Phage integrase family CR542_RS11075 PF14659 Phage integrase, N-terminal SAM-like domain CR542_RS11080 PF00692 dUTPase CR542_RS11090 PF18073 Rubredoxin metal binding domain CR542_RS11095 PF00484 Carbonic anhydrase CR542_RS11100 PF01987 Mitochondrial biogenesis AIM24 CR542_RS11120 PF00749 tRNA synthetases class I (E and Q), catalytic domain CR542_RS11135 PF02829 3H domain CR542_RS11135 PF08279 HTH domain CR542_RS11145 PF00764 Arginosuccinate synthase CR542_RS11150 PF00206 Lyase CR542_RS11150 PF14698 Argininosuccinate lyase C-terminal CR542_RS11155 PF00825 Ribonuclease P CR542_RS11160 PF02096 60Kd inner membrane protein CR542_RS11165 PF01424 R3H domain CR542_RS11165 PF14804 Jag N-terminus CR542_RS11170 PF00468 Ribosomal protein L34 CR542_RS11175 PF01026 TatD related DNase CR542_RS11180 PF13331 Domain of unknown function (DUF4093) CR542_RS11190 PF09297 NADH pyrophosphatase zinc ribbon domain CR542_RS11190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CR542_RS11190 PF00293 NUDIX domain CR542_RS11200 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CR542_RS11210 PF00398 Ribosomal RNA adenine dimethylase CR542_RS11225 PF00664 ABC transporter transmembrane region CR542_RS11225 PF00005 ABC transporter CR542_RS11235 PF03193 RsgA GTPase CR542_RS11235 PF16745 RsgA N-terminal domain CR542_RS11240 PF00834 Ribulose-phosphate 3 epimerase family CR542_RS11245 PF04263 Thiamin pyrophosphokinase, catalytic domain CR542_RS11245 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CR542_RS11250 PF02646 RmuC family CR542_RS11255 PF01966 HD domain CR542_RS11255 PF01336 OB-fold nucleic acid binding domain CR542_RS11265 PF00156 Phosphoribosyl transferase domain CR542_RS11265 PF09182 Bacterial purine repressor, N-terminal CR542_RS11270 PF06013 Proteins of 100 residues with WXG CR542_RS11290 PF10140 WXG100 protein secretion system (Wss), protein YukC CR542_RS11295 PF01580 FtsK/SpoIIIE family CR542_RS11295 PF12538 DNA transporter CR542_RS11405 PF00849 RNA pseudouridylate synthase CR542_RS11405 PF01479 S4 domain CR542_RS11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR542_RS11415 PF00905 Penicillin binding protein transpeptidase domain CR542_RS11415 PF00912 Transglycosylase CR542_RS11420 PF00471 Ribosomal protein L33 CR542_RS11430 PF02357 Transcription termination factor nusG CR542_RS11430 PF00467 KOW motif CR542_RS11435 PF00082 Subtilase family CR542_RS11435 PF02225 PA domain CR542_RS11435 PF00746 LPXTG cell wall anchor motif CR542_RS11435 PF06280 Fn3-like domain CR542_RS11450 PF00318 Ribosomal protein S2 CR542_RS11455 PF00889 Elongation factor TS CR542_RS11465 PF00571 CBS domain CR542_RS11465 PF00478 IMP dehydrogenase / GMP reductase domain CR542_RS11470 PF00579 tRNA synthetases class I (W and Y) CR542_RS11475 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CR542_RS11475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CR542_RS11480 PF00005 ABC transporter CR542_RS11480 PF12848 ABC transporter CR542_RS11510 PF02590 Predicted SPOUT methyltransferase CR542_RS11515 PF13180 PDZ domain CR542_RS11520 PF02195 ParB-like nuclease domain CR542_RS11520 PF17762 HTH domain found in ParB protein