locus-tag	class	description
DK877_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DK877_RS00010	COG0592	DNA-directed DNA polymerase activity
DK877_RS00030	COG0012	GTP binding
DK877_RS00035	COG0193	aminoacyl-tRNA hydrolase activity
DK877_RS00040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DK877_RS00045	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DK877_RS00060	COG0037	tRNA processing
DK877_RS00070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DK877_RS00180	COG1792	Involved in formation and maintenance of cell shape
DK877_RS00195	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DK877_RS00200	COG0436	Aminotransferase
DK877_RS00205	COG1381	Involved in DNA repair and RecF pathway recombination
DK877_RS00210	COG0416	fatty acid biosynthetic process
DK877_RS00215	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DK877_RS00225	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DK877_RS00240	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DK877_RS00245	COG0138	bifunctional purine biosynthesis protein purh
DK877_RS00270	COG0151	Belongs to the GarS family
DK877_RS00275	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DK877_RS00290	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DK877_RS00320	COG1131	(ABC) transporter
DK877_RS00330	COG1132	(ABC) transporter
DK877_RS00340	COG2255	four-way junction helicase activity
DK877_RS00350	COG0546	phosphoglycolate phosphatase activity
DK877_RS00360	COG0285	dihydrofolate synthase activity
DK877_RS00370	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DK877_RS00375	COG0632	four-way junction helicase activity
DK877_RS00380	COG0519	Catalyzes the synthesis of GMP from XMP
DK877_RS00395	COG1393	Belongs to the ArsC family
DK877_RS00400	COG4472	Bacterial protein of unknown function (DUF965)
DK877_RS00405	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DK877_RS00410	COG3906	Belongs to the UPF0473 family
DK877_RS00425	COG0051	transcription antitermination factor activity, RNA binding
DK877_RS00430	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DK877_RS00435	COG0088	Forms part of the polypeptide exit tunnel
DK877_RS00440	COG0089	rRNA binding
DK877_RS00445	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DK877_RS00450	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DK877_RS00455	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DK877_RS00460	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DK877_RS00465	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DK877_RS00470	COG0255	Belongs to the universal ribosomal protein uL29 family
DK877_RS00475	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DK877_RS00480	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DK877_RS00485	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DK877_RS00490	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DK877_RS00495	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DK877_RS00500	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DK877_RS00505	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DK877_RS00510	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DK877_RS00515	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DK877_RS00520	COG1841	ribosomal large subunit assembly
DK877_RS00530	COG0201	protein transport
DK877_RS00535	COG0563	adenylate kinase activity
DK877_RS00540	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DK877_RS00545	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DK877_RS00550	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DK877_RS00560	COG0202	RNA polymerase activity
DK877_RS00660	COG0582	viral genome integration into host DNA
DK877_RS00670	COG2946	Replication initiation factor
DK877_RS00715	COG1121	(ABC) transporter
DK877_RS00720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DK877_RS00725	COG0803	Belongs to the bacterial solute-binding protein 9 family
DK877_RS00725	COG3443	Belongs to the bacterial solute-binding protein 9 family
DK877_RS00750	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DK877_RS00755	COG0085	RNA polymerase activity
DK877_RS00760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DK877_RS00770	COG1619	proteins homologs of microcin C7 resistance protein MccF
DK877_RS00775	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DK877_RS00780	COG1459	type II secretion system
DK877_RS00785	COG4537	Required for transformation and DNA binding
DK877_RS00815	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DK877_RS00825	COG0285	dihydrofolate synthase activity
DK877_RS00830	COG1363	Peptidase, m42
DK877_RS00840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DK877_RS00850	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK877_RS00875	COG0459	protein refolding
DK877_RS00885	COG0049	tRNA binding
DK877_RS00890	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DK877_RS00895	COG3590	peptidase
DK877_RS00905	COG0126	phosphoglycerate kinase activity
DK877_RS00915	COG0789	Transcriptional regulator
DK877_RS00920	COG0174	glutamine synthetase
DK877_RS00935	COG1214	PFAM Peptidase M22, glycoprotease
DK877_RS00945	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DK877_RS00950	COG2207	Transcriptional regulator
DK877_RS00960	COG1175	transmembrane transport
DK877_RS00965	COG0395	ABC-type sugar transport system, permease component
DK877_RS00985	COG2855	membrane
DK877_RS00995	COG1131	(ABC) transporter
DK877_RS01005	COG2081	HI0933 family
DK877_RS01010	COG2723	6-phospho-beta-galactosidase activity
DK877_RS01020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK877_RS01045	COG3959	Transketolase, thiamine diphosphate binding domain
DK877_RS01050	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DK877_RS01055	COG0584	glycerophosphoryl diester phosphodiesterase
DK877_RS01060	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DK877_RS01065	COG2222	sugar isomerase
DK877_RS01085	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DK877_RS01095	COG3942	CHAP domain
DK877_RS01100	COG1882	Formate acetyltransferase
DK877_RS01115	COG2910	NAD(P)H-binding
DK877_RS01135	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS01175	COG0363	glucosamine-6-phosphate deaminase activity
DK877_RS01180	COG2217	Heavy metal translocating P-type atpase
DK877_RS01190	COG2217	Heavy metal translocating P-type atpase
DK877_RS01195	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DK877_RS01200	COG0681	Belongs to the peptidase S26 family
DK877_RS01220	COG0366	Alpha amylase catalytic
DK877_RS01225	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS01225	COG1263	PTS System
DK877_RS01230	COG2188	Transcriptional regulator
DK877_RS01245	COG1193	negative regulation of DNA recombination
DK877_RS01310	COG3118	belongs to the thioredoxin family
DK877_RS01320	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DK877_RS01320	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DK877_RS01380	COG1115	amino acid carrier protein
DK877_RS01420	COG3842	ATPase activity
DK877_RS01430	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DK877_RS01450	COG0668	transmembrane transport
DK877_RS01460	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DK877_RS01465	COG0167	dihydroorotate dehydrogenase activity
DK877_RS01470	COG2843	Capsule synthesis protein
DK877_RS01475	COG0561	phosphatase activity
DK877_RS01490	COG1131	(ABC) transporter
DK877_RS01495	COG1309	transcriptional regulator
DK877_RS01535	COG1346	cytolysis
DK877_RS01540	COG2116	formate transmembrane transporter activity
DK877_RS01545	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DK877_RS01550	COG0433	COG0433 Predicted ATPase
DK877_RS01555	COG0494	nUDIX hydrolase
DK877_RS01575	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DK877_RS01580	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DK877_RS01585	COG0124	histidyl-tRNA synthetase
DK877_RS01590	COG1064	alcohol dehydrogenase
DK877_RS01595	COG1454	alcohol dehydrogenase
DK877_RS01595	COG1012	belongs to the aldehyde dehydrogenase family
DK877_RS01615	COG1132	(ABC) transporter
DK877_RS01620	COG1129	ABC transporter
DK877_RS01625	COG0534	Mate efflux family protein
DK877_RS01630	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DK877_RS01645	COG1304	FMN binding
DK877_RS01650	COG1132	(ABC) transporter
DK877_RS01655	COG1132	(ABC) transporter
DK877_RS01660	COG3830	Belongs to the UPF0237 family
DK877_RS01665	COG2848	UPF0210 protein
DK877_RS01670	COG0588	phosphoglycerate mutase activity
DK877_RS01675	COG1420	regulation of RNA biosynthetic process
DK877_RS01680	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DK877_RS01685	COG0443	Heat shock 70 kDa protein
DK877_RS01690	COG0484	heat shock protein binding
DK877_RS01695	COG0095	Lipoate-protein ligase
DK877_RS01705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS01710	COG0765	amino acid transport
DK877_RS01725	COG3655	Transcriptional regulator
DK877_RS01735	COG2217	Heavy metal translocating P-type atpase
DK877_RS01760	COG4475	Protein of unknown function (DUF436)
DK877_RS01785	COG4221	oxidoreductase activity
DK877_RS01790	COG0446	pyridine nucleotide-disulphide oxidoreductase
DK877_RS01790	COG1902	pentaerythritol trinitrate reductase activity
DK877_RS01810	COG0544	peptidyl-prolyl cis-trans isomerase activity
DK877_RS01840	COG3343	RNA polymerase activity
DK877_RS01845	COG0504	CTP synthase activity
DK877_RS01855	COG0191	fructose-bisphosphate aldolase activity
DK877_RS01860	COG0227	Belongs to the bacterial ribosomal protein bL28 family
DK877_RS01895	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DK877_RS01925	COG0436	Aminotransferase
DK877_RS01930	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DK877_RS01935	COG1335	isochorismatase
DK877_RS01945	COG0335	large ribosomal subunit rRNA binding
DK877_RS01955	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DK877_RS01960	COG0154	amidase activity
DK877_RS01965	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DK877_RS01975	COG1609	Transcriptional regulator
DK877_RS01980	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DK877_RS01985	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
DK877_RS02005	COG3142	Participates in the control of copper homeostasis
DK877_RS02020	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DK877_RS02025	COG1534	Rna-binding protein
DK877_RS02030	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DK877_RS02035	COG1713	HD superfamily hydrolase involved in NAD metabolism
DK877_RS02050	COG0799	negative regulation of ribosome biogenesis
DK877_RS02055	COG2226	methyltransferase
DK877_RS02080	COG0242	peptide deformylase activity
DK877_RS02090	COG1640	4-alpha-glucanotransferase
DK877_RS02095	COG0058	SHG alpha-glucan phosphorylase activity
DK877_RS02110	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS02110	COG1263	PTS System
DK877_RS02110	COG2190	(PTS) system
DK877_RS02125	COG0217	transcriptional regulatory protein
DK877_RS02135	COG4720	Psort location CytoplasmicMembrane, score
DK877_RS02155	COG1122	ATPase activity
DK877_RS02170	COG0357	Ribosomal RNA small subunit methyltransferase G
DK877_RS02175	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DK877_RS02180	COG3331	DNA recombination
DK877_RS02185	COG4474	Belongs to the UPF0398 family
DK877_RS02190	COG3599	regulation of cell shape
DK877_RS02210	COG1854	S-ribosylhomocysteine lyase activity
DK877_RS02215	COG1418	mRNA catabolic process
DK877_RS02225	COG1758	RNA polymerase activity
DK877_RS02230	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DK877_RS02235	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DK877_RS02240	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DK877_RS02240	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DK877_RS02245	COG0631	protein serine/threonine phosphatase activity
DK877_RS02250	COG0515	serine threonine protein kinase
DK877_RS02250	COG2815	serine threonine protein kinase
DK877_RS02275	COG1098	S1 RNA binding domain
DK877_RS02285	COG4974	Belongs to the 'phage' integrase family
DK877_RS02450	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DK877_RS02455	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DK877_RS02460	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DK877_RS02475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DK877_RS02480	COG3022	response to hydroperoxide
DK877_RS02490	COG3944	biosynthesis protein
DK877_RS02500	COG4464	protein tyrosine phosphatase activity
DK877_RS02515	COG0438	transferase activity, transferring glycosyl groups
DK877_RS02530	COG1442	glycosyl transferase family 8
DK877_RS02530	COG1216	Glycosyl transferase, family 2
DK877_RS02535	COG1216	Glycosyl transferase, family 2
DK877_RS02535	COG1442	glycosyl transferase family 8
DK877_RS02565	COG2089	acid synthase
DK877_RS02580	COG1083	cytidylyl-transferase
DK877_RS02580	COG2755	lipolytic protein G-D-S-L family
DK877_RS02645	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DK877_RS02650	COG0077	Prephenate dehydratase
DK877_RS02660	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DK877_RS02670	COG0562	UDP-galactopyranose mutase
DK877_RS02675	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
DK877_RS02690	COG0436	Aminotransferase
DK877_RS02710	COG0534	Mate efflux family protein
DK877_RS02715	COG0251	oxidation-reduction process
DK877_RS02720	COG1660	Displays ATPase and GTPase activities
DK877_RS02725	COG0391	Required for morphogenesis under gluconeogenic growth conditions
DK877_RS02730	COG1481	regulation of sporulation
DK877_RS02745	COG0454	-acetyltransferase
DK877_RS02750	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DK877_RS02755	COG0549	Belongs to the carbamate kinase family
DK877_RS02760	COG1288	antiporter activity
DK877_RS02765	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DK877_RS02770	COG3064	Membrane
DK877_RS02770	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DK877_RS02770	COG3583	domain protein
DK877_RS02775	COG1438	arginine binding
DK877_RS02780	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DK877_RS02785	COG0363	glucosamine-6-phosphate deaminase activity
DK877_RS02820	COG1696	Membrane protein involved in D-alanine export
DK877_RS02825	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DK877_RS02830	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DK877_RS02840	COG0435	Glutathione S-transferase
DK877_RS02845	COG1187	pseudouridine synthase activity
DK877_RS02850	COG0386	Belongs to the glutathione peroxidase family
DK877_RS02855	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK877_RS02860	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DK877_RS02865	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DK877_RS02870	COG1120	ATPase activity
DK877_RS02875	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DK877_RS02880	COG0204	Acyl-transferase
DK877_RS02885	COG1555	photosystem II stabilization
DK877_RS02885	COG1596	polysaccharide export
DK877_RS02890	COG2333	competence protein COMEC
DK877_RS02890	COG0658	competence protein
DK877_RS02900	COG0517	IMP dehydrogenase activity
DK877_RS02915	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DK877_RS02920	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DK877_RS02925	COG0470	DNA polymerase III
DK877_RS02930	COG4467	Involved in initiation control of chromosome replication
DK877_RS02940	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DK877_RS02950	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DK877_RS02955	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DK877_RS02960	COG1393	Belongs to the ArsC family
DK877_RS02970	COG0708	Exodeoxyribonuclease III
DK877_RS02980	COG0531	amino acid
DK877_RS03010	COG1061	Type III restriction enzyme res subunit
DK877_RS03035	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DK877_RS03040	COG4684	Psort location CytoplasmicMembrane, score
DK877_RS03045	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DK877_RS03055	COG2759	Belongs to the formate--tetrahydrofolate ligase family
DK877_RS03095	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK877_RS03100	COG1349	DNA-binding transcription factor activity
DK877_RS03110	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK877_RS03115	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS03120	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS03125	COG1882	Formate acetyltransferase
DK877_RS03145	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DK877_RS03150	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DK877_RS03165	COG1739	Uncharacterized protein family UPF0029
DK877_RS03170	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DK877_RS03260	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DK877_RS03270	COG3557	Belongs to the UPF0374 family
DK877_RS03280	COG2188	Transcriptional regulator
DK877_RS03285	COG2188	Transcriptional regulator
DK877_RS03295	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS03305	COG3716	PTS system mannose fructose sorbose family IID component
DK877_RS03315	COG2017	converts alpha-aldose to the beta-anomer
DK877_RS03330	COG0346	lactoylglutathione lyase activity
DK877_RS03365	COG0494	nUDIX hydrolase
DK877_RS03395	COG0681	Belongs to the peptidase S26 family
DK877_RS03430	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DK877_RS03445	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DK877_RS03450	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DK877_RS03455	COG1799	cell septum assembly
DK877_RS03470	COG3599	regulation of cell shape
DK877_RS03500	COG0542	response to heat
DK877_RS03505	COG4703	Protein of unknown function (DUF1797)
DK877_RS03510	COG0765	amino acid transport
DK877_RS03520	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DK877_RS03550	COG0789	Transcriptional regulator
DK877_RS03575	COG4443	Transcriptional Coactivator p15 (PC4)
DK877_RS03580	COG1268	BioY protein
DK877_RS03590	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DK877_RS03600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DK877_RS03605	COG1136	(ABC) transporter
DK877_RS03610	COG0577	efflux transmembrane transporter activity
DK877_RS03630	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DK877_RS03640	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DK877_RS03650	COG3859	Proton-coupled thiamine transporter YuaJ
DK877_RS03670	COG0772	Belongs to the SEDS family
DK877_RS03675	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DK877_RS03690	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DK877_RS03695	COG0149	triose-phosphate isomerase activity
DK877_RS03705	COG1078	dGTPase activity
DK877_RS03740	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DK877_RS03750	COG2884	Cell division ATP-binding protein ftsE
DK877_RS03755	COG2177	Part of the ABC transporter FtsEX involved in
DK877_RS03775	COG1132	(ABC) transporter
DK877_RS03780	COG1132	(ABC) transporter
DK877_RS03785	COG1011	Hydrolase
DK877_RS03805	COG1737	Transcriptional regulator
DK877_RS03815	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DK877_RS03820	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DK877_RS03825	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DK877_RS03830	COG0237	dephospho-CoA kinase activity
DK877_RS03835	COG2814	Major facilitator Superfamily
DK877_RS03840	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DK877_RS03850	COG0557	exoribonuclease II activity
DK877_RS03855	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DK877_RS03860	COG1063	alcohol dehydrogenase
DK877_RS03875	COG2217	Heavy metal translocating P-type atpase
DK877_RS03880	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DK877_RS03890	COG1136	(ABC) transporter
DK877_RS03900	COG3547	Transposase (IS116 IS110 IS902 family)
DK877_RS03910	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DK877_RS03910	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DK877_RS03920	COG1832	CoA-binding protein
DK877_RS03930	COG0343	queuine tRNA-ribosyltransferase activity
DK877_RS03940	COG1609	Transcriptional regulator
DK877_RS03955	COG0438	transferase activity, transferring glycosyl groups
DK877_RS03970	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DK877_RS03975	COG0765	amino acid transport
DK877_RS03980	COG0765	amino acid transport
DK877_RS03985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS03995	COG0745	RESPONSE REGULATOR receiver
DK877_RS04005	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DK877_RS04015	COG0488	(ABC) transporter
DK877_RS04020	COG0768	penicillin binding
DK877_RS04025	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DK877_RS04030	COG1181	Belongs to the D-alanine--D-alanine ligase family
DK877_RS04050	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DK877_RS04060	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DK877_RS04075	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DK877_RS04095	COG1609	Transcriptional regulator
DK877_RS04100	COG4209	transmembrane transport
DK877_RS04105	COG0395	ABC-type sugar transport system, permease component
DK877_RS04110	COG1653	transport
DK877_RS04115	COG1621	beta-fructofuranosidase activity
DK877_RS04120	COG0697	spore germination
DK877_RS04120	COG1674	ftsk spoiiie
DK877_RS04125	COG0346	lactoylglutathione lyase activity
DK877_RS04150	COG0625	glutathione transferase activity
DK877_RS04155	COG2244	polysaccharide biosynthetic process
DK877_RS04160	COG0528	UMP kinase activity
DK877_RS04165	COG0233	cytoplasmic translational termination
DK877_RS04170	COG2996	Protein conserved in bacteria
DK877_RS04185	COG4479	Belongs to the UPF0346 family
DK877_RS04195	COG0772	Belongs to the SEDS family
DK877_RS04200	COG0693	protein deglycase activity
DK877_RS04205	COG0187	DNA topoisomerase II activity
DK877_RS04210	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DK877_RS04215	COG0560	Phosphoserine phosphatase
DK877_RS04340	COG1011	Hydrolase
DK877_RS04350	COG2706	6-phosphogluconolactonase activity
DK877_RS04355	COG0628	permease
DK877_RS04365	COG3527	Alpha-acetolactate decarboxylase
DK877_RS04370	COG1293	RNA-binding protein homologous to eukaryotic snRNP
DK877_RS04375	COG3711	transcriptional antiterminator
DK877_RS04380	COG2190	(PTS) system
DK877_RS04380	COG1263	PTS System
DK877_RS04380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS04400	COG3842	ATPase activity
DK877_RS04435	COG0488	(ABC) transporter
DK877_RS04445	COG2226	methyltransferase
DK877_RS04450	COG3442	glutamine amidotransferase
DK877_RS04455	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DK877_RS04470	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DK877_RS04475	COG0488	(ABC) transporter
DK877_RS04480	COG2226	methyltransferase
DK877_RS04500	COG1573	uracil-dna glycosylase
DK877_RS04510	COG1704	LemA family
DK877_RS04515	COG2268	Band 7 protein
DK877_RS04530	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DK877_RS04540	COG1518	maintenance of DNA repeat elements
DK877_RS04555	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DK877_RS04560	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
DK877_RS04570	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DK877_RS04575	COG0813	purine-nucleoside phosphorylase activity
DK877_RS04580	COG0058	SHG alpha-glucan phosphorylase activity
DK877_RS04590	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DK877_RS04600	COG1051	belongs to the nudix hydrolase family
DK877_RS04605	COG0647	UMP catabolic process
DK877_RS04615	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DK877_RS04620	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DK877_RS04625	COG1970	mechanosensitive ion channel activity
DK877_RS04630	COG0358	DNA primase activity
DK877_RS04635	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DK877_RS04640	COG2151	metal-sulfur cluster biosynthetic enzyme
DK877_RS04675	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DK877_RS04685	COG1131	(ABC) transporter
DK877_RS04690	COG2188	Transcriptional regulator
DK877_RS04700	COG0205	6-phosphofructokinase activity
DK877_RS04705	COG0469	pyruvate kinase activity
DK877_RS04720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DK877_RS04725	COG0657	acetylesterase activity
DK877_RS04725	COG2755	lipolytic protein G-D-S-L family
DK877_RS04740	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DK877_RS04745	COG0765	amino acid transport
DK877_RS04750	COG1126	abc transporter atp-binding protein
DK877_RS04755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS04770	COG3684	Belongs to the aldolase LacD family
DK877_RS04785	COG4120	Belongs to the binding-protein-dependent transport system permease family
DK877_RS04790	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DK877_RS04790	COG1116	anion transmembrane transporter activity
DK877_RS04795	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DK877_RS04800	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DK877_RS04805	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DK877_RS04810	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DK877_RS04820	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK877_RS04820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK877_RS04845	COG4122	O-methyltransferase activity
DK877_RS04850	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DK877_RS04860	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DK877_RS04880	COG1476	TRANSCRIPTIONal
DK877_RS04915	COG1028	Short-chain dehydrogenase reductase Sdr
DK877_RS04940	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DK877_RS04945	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS04955	COG3716	PTS system mannose fructose sorbose family IID component
DK877_RS04965	COG5492	domain, Protein
DK877_RS04980	COG1609	Transcriptional regulator
DK877_RS04985	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK877_RS04990	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DK877_RS04995	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DK877_RS05000	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DK877_RS05005	COG0372	Belongs to the citrate synthase family
DK877_RS05010	COG0538	isocitrate dehydrogenase activity
DK877_RS05015	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK877_RS05050	COG1196	nuclear chromosome segregation
DK877_RS05055	COG0561	phosphatase activity
DK877_RS05060	COG0561	phosphatase activity
DK877_RS05065	COG0552	protein localization to endoplasmic reticulum
DK877_RS05080	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DK877_RS05085	COG3689	TIGRFAM TIGR03943 family protein
DK877_RS05090	COG0701	Predicted permease
DK877_RS05105	COG1597	lipid kinase activity
DK877_RS05115	COG0356	it plays a direct role in the translocation of protons across the membrane
DK877_RS05120	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DK877_RS05125	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DK877_RS05130	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DK877_RS05135	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DK877_RS05140	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DK877_RS05145	COG0355	proton-transporting ATP synthase activity, rotational mechanism
DK877_RS05155	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DK877_RS05175	COG2211	Major facilitator Superfamily
DK877_RS05185	COG3250	beta-galactosidase activity
DK877_RS05195	COG0800	Aldolase
DK877_RS05205	COG1312	Catalyzes the dehydration of D-mannonate
DK877_RS05210	COG1028	Short-chain dehydrogenase reductase Sdr
DK877_RS05240	COG0072	phenylalanine-tRNA ligase activity
DK877_RS05240	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DK877_RS05265	COG1051	belongs to the nudix hydrolase family
DK877_RS05270	COG0302	gtp cyclohydrolase
DK877_RS05290	COG2610	gluconate transmembrane transporter activity
DK877_RS05295	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DK877_RS05310	COG1846	Transcriptional regulator
DK877_RS05315	COG3759	membrane
DK877_RS05335	COG1695	Transcriptional regulator
DK877_RS05350	COG2195	Cleaves the N-terminal amino acid of tripeptides
DK877_RS05355	COG0561	phosphatase activity
DK877_RS05395	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DK877_RS05400	COG0196	riboflavin kinase activity
DK877_RS05405	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DK877_RS05410	COG1393	Belongs to the ArsC family
DK877_RS05415	COG4476	Belongs to the UPF0223 family
DK877_RS05420	COG0483	inositol monophosphate 1-phosphatase activity
DK877_RS05425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DK877_RS05425	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
DK877_RS05435	COG0573	inorganic phosphate transmembrane transporter activity
DK877_RS05440	COG0581	inorganic phosphate transmembrane transporter activity
DK877_RS05445	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DK877_RS05450	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DK877_RS05455	COG0704	Plays a role in the regulation of phosphate uptake
DK877_RS05470	COG0745	RESPONSE REGULATOR receiver
DK877_RS05475	COG5002	protein histidine kinase activity
DK877_RS05485	COG0268	Binds directly to 16S ribosomal RNA
DK877_RS05490	COG1072	(Pantothenic acid kinase))
DK877_RS05495	COG2813	Specifically methylates the guanine in position
DK877_RS05500	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
DK877_RS05515	COG1744	ABC transporter substrate-binding protein PnrA-like
DK877_RS05535	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DK877_RS05545	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DK877_RS05550	COG0039	L-malate dehydrogenase activity
DK877_RS05555	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DK877_RS05560	COG3764	Sortase (surface protein transpeptidase)
DK877_RS05570	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DK877_RS05575	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DK877_RS05590	COG1104	cysteine desulfurase activity
DK877_RS05600	COG4116	CYTH
DK877_RS05605	COG2357	RelA SpoT domain protein
DK877_RS05610	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DK877_RS05615	COG0564	pseudouridine synthase activity
DK877_RS05620	COG0280	phosphate acetyltransferase
DK877_RS05625	COG1132	(ABC) transporter
DK877_RS05630	COG1132	(ABC) transporter
DK877_RS05645	COG1396	sequence-specific DNA binding
DK877_RS05670	COG1349	DNA-binding transcription factor activity
DK877_RS05675	COG0698	ribose 5-phosphate isomerase
DK877_RS05680	COG0698	ribose 5-phosphate isomerase
DK877_RS05685	COG1105	Belongs to the carbohydrate kinase PfkB family
DK877_RS05690	COG3684	Belongs to the aldolase LacD family
DK877_RS05695	COG3711	transcriptional antiterminator
DK877_RS05705	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS05705	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS05730	COG2873	o-acetylhomoserine
DK877_RS05735	COG0488	(ABC) transporter
DK877_RS05745	COG1126	abc transporter atp-binding protein
DK877_RS05790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS05795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS05805	COG0297	glycogen (starch) synthase activity
DK877_RS05820	COG0583	DNA-binding transcription factor activity
DK877_RS05830	COG0167	dihydroorotate dehydrogenase activity
DK877_RS05835	COG0284	orotidine-5'-phosphate decarboxylase activity
DK877_RS05840	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DK877_RS05850	COG0463	Glycosyl transferase, family 2
DK877_RS05855	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DK877_RS05865	COG0737	Belongs to the 5'-nucleotidase family
DK877_RS05870	COG0424	maF-like protein
DK877_RS05880	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DK877_RS05885	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DK877_RS05895	COG1272	protein, Hemolysin III
DK877_RS05905	COG0446	pyridine nucleotide-disulphide oxidoreductase
DK877_RS05915	COG1937	Protein conserved in bacteria
DK877_RS05920	COG0110	maltose O-acetyltransferase activity
DK877_RS05925	COG0758	DNA mediated transformation
DK877_RS05930	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DK877_RS05935	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DK877_RS05940	COG0222	ribosome binding
DK877_RS05955	COG0270	DNA (cytosine-5-)-methyltransferase activity
DK877_RS06105	COG1475	DNA binding
DK877_RS06110	COG4443	Transcriptional Coactivator p15 (PC4)
DK877_RS06165	COG1396	sequence-specific DNA binding
DK877_RS06170	COG0542	response to heat
DK877_RS06190	COG0210	DNA helicase
DK877_RS06210	COG3843	relaxase mobilization nuclease domain protein
DK877_RS06225	COG1940	carbohydrate kinase activity
DK877_RS06230	COG0698	ribose 5-phosphate isomerase
DK877_RS06235	COG0698	ribose 5-phosphate isomerase
DK877_RS06240	COG1105	Belongs to the carbohydrate kinase PfkB family
DK877_RS06250	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK877_RS06270	COG1396	sequence-specific DNA binding
DK877_RS06280	COG4974	Belongs to the 'phage' integrase family
DK877_RS06340	COG3942	CHAP domain
DK877_RS06340	COG1705	Flagellar rod assembly protein muramidase FlgJ
DK877_RS06365	COG0270	DNA (cytosine-5-)-methyltransferase activity
DK877_RS06380	COG0827	DNA restriction-modification system
DK877_RS06400	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DK877_RS06415	COG3843	relaxase mobilization nuclease domain protein
DK877_RS06430	COG1070	Carbohydrate kinase
DK877_RS06450	COG1175	transmembrane transport
DK877_RS06455	COG0395	ABC-type sugar transport system, permease component
DK877_RS06495	COG0647	UMP catabolic process
DK877_RS06500	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DK877_RS06505	COG2207	Transcriptional regulator
DK877_RS06505	COG3708	Transcriptional regulator
DK877_RS06515	COG2382	esterase
DK877_RS06550	COG1136	(ABC) transporter
DK877_RS06570	COG0745	RESPONSE REGULATOR receiver
DK877_RS06585	COG4974	Belongs to the 'phage' integrase family
DK877_RS06590	COG1660	Displays ATPase and GTPase activities
DK877_RS06605	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DK877_RS06610	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DK877_RS06615	COG2188	Transcriptional regulator
DK877_RS06625	COG4268	DNA restriction-modification system
DK877_RS06630	COG1401	restriction endodeoxyribonuclease activity
DK877_RS06655	COG4221	oxidoreductase activity
DK877_RS06660	COG0741	lytic transglycosylase activity
DK877_RS06670	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DK877_RS06680	COG0009	L-threonylcarbamoyladenylate synthase
DK877_RS06685	COG2890	protein-(glutamine-N5) methyltransferase activity
DK877_RS06690	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DK877_RS06715	COG0481	GTPase activity
DK877_RS06730	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DK877_RS06735	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DK877_RS06740	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DK877_RS06755	COG1940	carbohydrate kinase activity
DK877_RS06765	COG0488	(ABC) transporter
DK877_RS06770	COG0617	tRNA 3'-terminal CCA addition
DK877_RS06775	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DK877_RS06780	COG1307	EDD domain protein, DegV family
DK877_RS06790	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK877_RS06790	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK877_RS06790	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DK877_RS06795	COG1105	Belongs to the carbohydrate kinase PfkB family
DK877_RS06800	COG1349	DNA-binding transcription factor activity
DK877_RS06805	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DK877_RS06810	COG0336	Belongs to the RNA methyltransferase TrmD family
DK877_RS06815	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DK877_RS06820	COG0534	Mate efflux family protein
DK877_RS06830	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DK877_RS06835	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DK877_RS06850	COG0038	chloride channel
DK877_RS06860	COG1177	transmembrane transport
DK877_RS06865	COG1176	ABC-type spermidine putrescine transport system, permease component I
DK877_RS06870	COG3842	ATPase activity
DK877_RS06875	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DK877_RS06885	COG0083	homoserine kinase activity
DK877_RS06895	COG0726	polysaccharide deacetylase
DK877_RS06900	COG1132	(ABC) transporter
DK877_RS06915	COG0228	four-way junction DNA binding
DK877_RS06925	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DK877_RS06930	COG2136	Putative SAM-dependent methyltransferase
DK877_RS06930	COG2521	methyltransferase
DK877_RS06940	COG0505	Belongs to the CarA family
DK877_RS06945	COG0540	Belongs to the ATCase OTCase family
DK877_RS06950	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DK877_RS06960	COG2824	Alkylphosphonate utilization operon protein PhnA
DK877_RS06965	COG0564	pseudouridine synthase activity
DK877_RS06985	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DK877_RS06990	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DK877_RS06995	COG1114	Component of the transport system for branched-chain amino acids
DK877_RS07000	COG0301	tRNA thio-modification
DK877_RS07005	COG1104	cysteine desulfurase activity
DK877_RS07030	COG0539	negative regulation of cytoplasmic translation
DK877_RS07055	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DK877_RS07065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DK877_RS07080	COG2184	nucleotidyltransferase activity
DK877_RS07085	COG0187	DNA topoisomerase II activity
DK877_RS07095	COG1074	ATP-dependent DNA helicase activity
DK877_RS07100	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DK877_RS07130	COG1131	(ABC) transporter
DK877_RS07160	COG1011	Hydrolase
DK877_RS07170	COG0210	DNA helicase
DK877_RS07185	COG1164	Oligoendopeptidase f
DK877_RS07305	COG3679	Belongs to the UPF0342 family
DK877_RS07310	COG0287	Prephenate dehydrogenase
DK877_RS07315	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DK877_RS07320	COG0710	3-dehydroquinate dehydratase activity
DK877_RS07325	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DK877_RS07330	COG1368	sulfuric ester hydrolase activity
DK877_RS07345	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DK877_RS07355	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DK877_RS07400	COG1442	glycosyl transferase family 8
DK877_RS07400	COG1216	Glycosyl transferase, family 2
DK877_RS07405	COG1442	glycosyl transferase family 8
DK877_RS07435	COG1442	glycosyl transferase family 8
DK877_RS07435	COG1216	Glycosyl transferase, family 2
DK877_RS07465	COG1091	dTDP-4-dehydrorhamnose reductase activity
DK877_RS07470	COG1088	dTDP-glucose 4,6-dehydratase activity
DK877_RS07485	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DK877_RS07495	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DK877_RS07500	COG2384	SAM-dependent methyltransferase
DK877_RS07520	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DK877_RS07530	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DK877_RS07530	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DK877_RS07535	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DK877_RS07545	COG0300	oxidoreductase activity
DK877_RS07550	COG1234	tRNA 3'-trailer cleavage
DK877_RS07560	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DK877_RS07565	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DK877_RS07575	COG2807	transmembrane transport
DK877_RS07580	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DK877_RS07585	COG1702	phosphate starvation-inducible protein PhoH
DK877_RS07605	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DK877_RS07610	COG0716	FMN binding
DK877_RS07620	COG1605	Chorismate mutase
DK877_RS07620	COG0287	Prephenate dehydrogenase
DK877_RS07625	COG0038	chloride channel
DK877_RS07635	COG0737	Belongs to the 5'-nucleotidase family
DK877_RS07640	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DK877_RS07645	COG1466	dna polymerase III delta subunit
DK877_RS07680	COG0683	leucine binding
DK877_RS07695	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DK877_RS07700	COG0366	Alpha amylase catalytic
DK877_RS07715	COG0395	ABC-type sugar transport system, permease component
DK877_RS07720	COG1175	transmembrane transport
DK877_RS07725	COG1653	transport
DK877_RS07740	COG2207	Transcriptional regulator
DK877_RS07745	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DK877_RS07750	COG0626	cystathionine gamma-synthase activity
DK877_RS07770	COG3547	Transposase (IS116 IS110 IS902 family)
DK877_RS07775	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DK877_RS07780	COG2827	Endonuclease containing a URI domain
DK877_RS07800	COG0640	Transcriptional regulator
DK877_RS07805	COG0513	Belongs to the DEAD box helicase family
DK877_RS07810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DK877_RS07855	COG0494	nUDIX hydrolase
DK877_RS07860	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DK877_RS07870	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DK877_RS07875	COG1028	Short-chain dehydrogenase reductase Sdr
DK877_RS07900	COG0577	efflux transmembrane transporter activity
DK877_RS07905	COG1136	(ABC) transporter
DK877_RS07910	COG2205	protein histidine kinase activity
DK877_RS07925	COG0436	Aminotransferase
DK877_RS07935	COG1174	glycine betaine transport
DK877_RS07940	COG1125	glycine betaine transport
DK877_RS07940	COG0517	IMP dehydrogenase activity
DK877_RS07960	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DK877_RS07965	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DK877_RS07970	COG1482	cell wall glycoprotein biosynthetic process
DK877_RS07985	COG3091	SprT-like family
DK877_RS07990	COG2183	response to ionizing radiation
DK877_RS08010	COG0656	L-ascorbic acid biosynthetic process
DK877_RS08015	COG4708	membrane
DK877_RS08020	COG2246	polysaccharide biosynthetic process
DK877_RS08030	COG0024	Methionine aminopeptidase
DK877_RS08040	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DK877_RS08045	COG2249	NAD(P)H dehydrogenase (quinone) activity
DK877_RS08050	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DK877_RS08055	COG2131	deaminase
DK877_RS08075	COG1363	Peptidase, m42
DK877_RS08090	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DK877_RS08095	COG1956	GAF domain-containing protein
DK877_RS08115	COG0673	inositol 2-dehydrogenase activity
DK877_RS08120	COG0513	Belongs to the DEAD box helicase family
DK877_RS08125	COG0726	polysaccharide deacetylase
DK877_RS08140	COG0183	Belongs to the thiolase family
DK877_RS08145	COG3425	synthase
DK877_RS08170	COG0776	regulation of translation
DK877_RS08180	COG2755	lipolytic protein G-D-S-L family
DK877_RS08185	COG1307	EDD domain protein, DegV family
DK877_RS08190	COG0497	DNA recombination
DK877_RS08195	COG1438	arginine binding
DK877_RS08200	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DK877_RS08210	COG1722	exodeoxyribonuclease VII activity
DK877_RS08215	COG1570	exodeoxyribonuclease VII activity
DK877_RS08220	COG2321	neutral zinc metallopeptidase
DK877_RS08225	COG1755	Isoprenylcysteine carboxyl methyltransferase
DK877_RS08230	COG5002	protein histidine kinase activity
DK877_RS08235	COG0745	RESPONSE REGULATOR receiver
DK877_RS08255	COG1227	inorganic diphosphatase activity
DK877_RS08265	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DK877_RS08270	COG1253	flavin adenine dinucleotide binding
DK877_RS08275	COG1119	ATPase activity
DK877_RS08280	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DK877_RS08290	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DK877_RS08295	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
DK877_RS08310	COG4470	Protein conserved in bacteria
DK877_RS08315	COG3480	Lon protease (S16) C-terminal proteolytic domain
DK877_RS08320	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DK877_RS08325	COG0742	ribosomal rna small subunit methyltransferase
DK877_RS08335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DK877_RS08340	COG4483	Protein conserved in bacteria
DK877_RS08345	COG2197	response regulator
DK877_RS08350	COG2203	Gaf domain
DK877_RS08350	COG4585	Histidine kinase
DK877_RS08355	COG0842	Transport permease protein
DK877_RS08360	COG1131	(ABC) transporter
DK877_RS08375	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DK877_RS08385	COG2755	lipolytic protein G-D-S-L family
DK877_RS08385	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DK877_RS08390	COG0671	phosphoesterase, PA-phosphatase related
DK877_RS08395	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DK877_RS08410	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DK877_RS08415	COG1187	pseudouridine synthase activity
DK877_RS08420	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DK877_RS08425	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DK877_RS08430	COG0582	viral genome integration into host DNA
DK877_RS08450	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
DK877_RS08455	COG3763	UPF0154 protein
DK877_RS08465	COG3579	cysteine-type endopeptidase activity
DK877_RS08480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DK877_RS08485	COG1254	Belongs to the acylphosphatase family
DK877_RS08495	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DK877_RS08500	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DK877_RS08510	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DK877_RS08520	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DK877_RS08530	COG1160	GTP binding
DK877_RS08540	COG1484	DNA-dependent DNA replication
DK877_RS08550	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DK877_RS08555	COG0628	permease
DK877_RS08560	COG0745	RESPONSE REGULATOR receiver
DK877_RS08565	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DK877_RS08575	COG0492	ferredoxin-NADP+ reductase activity
DK877_RS08585	COG0513	Belongs to the DEAD box helicase family
DK877_RS08605	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DK877_RS08610	COG0768	penicillin binding
DK877_RS08620	COG0275	rRNA processing
DK877_RS08675	COG4939	FMN-binding domain protein
DK877_RS08680	COG0142	geranyltranstransferase activity
DK877_RS08685	COG1252	NADH dehydrogenase
DK877_RS08695	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DK877_RS08700	COG0569	domain protein
DK877_RS08705	COG0534	Mate efflux family protein
DK877_RS08715	COG4224	UPF0291 protein
DK877_RS08720	COG0751	glycine-tRNA ligase activity
DK877_RS08745	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DK877_RS08750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DK877_RS08755	COG1464	Belongs to the NlpA lipoprotein family
DK877_RS08760	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DK877_RS08765	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DK877_RS08770	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DK877_RS08780	COG0561	phosphatase activity
DK877_RS08790	COG3715	PTS system
DK877_RS08795	COG3716	PTS system mannose fructose sorbose family IID component
DK877_RS08820	COG3177	Filamentation induced by cAMP protein fic
DK877_RS08865	COG0825	malonyl-CoA metabolic process
DK877_RS08875	COG0439	Biotin carboxylase
DK877_RS08895	COG1028	Short-chain dehydrogenase reductase Sdr
DK877_RS08900	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DK877_RS08905	COG2070	2-Nitropropane dioxygenase
DK877_RS08915	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DK877_RS08925	COG1024	Enoyl-CoA hydratase
DK877_RS08930	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DK877_RS08935	COG0527	aspartate kinase activity
DK877_RS08940	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DK877_RS08945	COG0736	holo-[acyl-carrier-protein] synthase activity
DK877_RS08950	COG0653	protein targeting
DK877_RS08960	COG1940	carbohydrate kinase activity
DK877_RS08965	COG2190	(PTS) system
DK877_RS08965	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS08965	COG1263	PTS System
DK877_RS08970	COG1621	beta-fructofuranosidase activity
DK877_RS08975	COG1609	Transcriptional regulator
DK877_RS08980	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DK877_RS08995	COG0006	proline dipeptidase activity
DK877_RS09000	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DK877_RS09015	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DK877_RS09020	COG0629	single-stranded DNA binding
DK877_RS09030	COG0095	Lipoate-protein ligase
DK877_RS09035	COG2723	6-phospho-beta-galactosidase activity
DK877_RS09050	COG2723	6-phospho-beta-galactosidase activity
DK877_RS09055	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS09065	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK877_RS09070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK877_RS09070	COG3711	transcriptional antiterminator
DK877_RS09085	COG4095	Psort location CytoplasmicMembrane, score
DK877_RS09090	COG2723	6-phospho-beta-galactosidase activity
DK877_RS09095	COG0346	lactoylglutathione lyase activity
DK877_RS09100	COG2723	6-phospho-beta-galactosidase activity
DK877_RS09105	COG1917	Cupin 2, conserved barrel domain protein
DK877_RS09105	COG2207	Transcriptional regulator
DK877_RS09115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DK877_RS09115	COG2190	(PTS) system
DK877_RS09115	COG1263	PTS System
DK877_RS09120	COG3711	transcriptional antiterminator
DK877_RS09135	COG0508	dehydrogenase complex catalyzes the overall conversion of
DK877_RS09140	COG0508	dehydrogenase complex catalyzes the overall conversion of
DK877_RS09140	COG0022	dehydrogenase e1 component
DK877_RS09145	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DK877_RS09150	COG2860	membrane
DK877_RS09165	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DK877_RS09170	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DK877_RS09180	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DK877_RS09185	COG0195	Participates in both transcription termination and antitermination
DK877_RS09195	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DK877_RS09205	COG4473	ABC transporter
DK877_RS09210	COG1131	(ABC) transporter
DK877_RS09215	COG0537	adenosine 5'-monophosphoramidase activity
DK877_RS09225	COG1316	TRANSCRIPTIONal
DK877_RS09235	COG0802	atpase or kinase
DK877_RS09255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DK877_RS09260	COG0601	transmembrane transport
DK877_RS09265	COG4608	Belongs to the ABC transporter superfamily
DK877_RS09275	COG0747	negative chemotaxis
DK877_RS09280	COG1686	Belongs to the peptidase S11 family
DK877_RS09295	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DK877_RS09300	COG0719	Fe-S assembly protein
DK877_RS09310	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DK877_RS09315	COG4862	establishment of competence for transformation
DK877_RS09320	COG1968	undecaprenyl-diphosphatase activity
DK877_RS09325	COG0765	amino acid transport
DK877_RS09330	COG1126	abc transporter atp-binding protein
DK877_RS09345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DK877_RS09350	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DK877_RS09355	COG0440	acetolactate synthase activity
DK877_RS09360	COG0028	Belongs to the TPP enzyme family
DK877_RS09375	COG0129	dihydroxy-acid dehydratase activity
DK877_RS09385	COG2151	metal-sulfur cluster biosynthetic enzyme
DK877_RS09450	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DK877_RS09470	COG0488	(ABC) transporter
DK877_RS09490	COG0789	Transcriptional regulator
DK877_RS09490	COG4978	Transcriptional regulator
DK877_RS09530	COG0582	viral genome integration into host DNA
DK877_RS09540	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DK877_RS09555	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DK877_RS09570	COG3842	ATPase activity
DK877_RS09580	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DK877_RS09600	COG1045	serine acetyltransferase
DK877_RS09605	COG1185	polyribonucleotide nucleotidyltransferase activity
DK877_RS09610	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DK877_RS09615	COG1131	(ABC) transporter
DK877_RS09650	COG1187	pseudouridine synthase activity
DK877_RS09670	COG0242	peptide deformylase activity
DK877_RS09680	COG0066	3-isopropylmalate dehydratase activity
DK877_RS09700	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS09710	COG2188	Transcriptional regulator
DK877_RS09715	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK877_RS09730	COG2309	aminopeptidase activity
DK877_RS09745	COG2176	DNA-directed DNA polymerase activity
DK877_RS09750	COG2376	Dihydroxyacetone kinase
DK877_RS09760	COG2376	Dihydroxyacetone kinase
DK877_RS09765	COG1461	Dihydroxyacetone kinase
DK877_RS09770	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DK877_RS09775	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DK877_RS09780	COG0442	prolyl-tRNA aminoacylation
DK877_RS09790	COG4589	Belongs to the CDS family
DK877_RS09795	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DK877_RS09800	COG1862	Preprotein translocase
DK877_RS09810	COG1181	Belongs to the D-alanine--D-alanine ligase family
DK877_RS09810	COG2918	glutathione biosynthetic process
DK877_RS09820	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DK877_RS09825	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DK877_RS09830	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DK877_RS09835	COG0542	response to heat
DK877_RS09840	COG4463	regulation of RNA biosynthetic process
DK877_RS09850	COG4932	domain protein
DK877_RS09850	COG1388	LysM domain
DK877_RS09860	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DK877_RS09895	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DK877_RS09900	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DK877_RS09905	COG0492	ferredoxin-NADP+ reductase activity
DK877_RS09910	COG0564	pseudouridine synthase activity
DK877_RS10050	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DK877_RS10070	COG1564	THIamine pyrophosphokinase
DK877_RS10080	COG1162	GTPase activity
DK877_RS10090	COG1132	(ABC) transporter
DK877_RS10115	COG4115	mRNA cleavage
DK877_RS10140	COG0084	hydrolase, TatD family'
DK877_RS10150	COG1847	R3H domain protein
DK877_RS10160	COG0594	ribonuclease P activity
DK877_RS10165	COG0165	Argininosuccinate lyase
DK877_RS10170	COG0137	argininosuccinate synthase activity
DK877_RS10180	COG1827	regulation of RNA biosynthetic process
DK877_RS10235	COG0756	dUTP diphosphatase activity
DK877_RS10240	COG0582	viral genome integration into host DNA
DK877_RS10305	COG1132	(ABC) transporter
DK877_RS10310	COG1132	(ABC) transporter
DK877_RS10320	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DK877_RS10325	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DK877_RS10330	COG0705	Rhomboid family
DK877_RS10335	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DK877_RS10340	COG1473	amidohydrolase
DK877_RS10345	COG2171	N-acyltransferase activity
DK877_RS10355	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DK877_RS10380	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DK877_RS10405	COG3623	hexulose-6-phosphate isomerase
DK877_RS10430	COG1523	belongs to the glycosyl hydrolase 13 family
DK877_RS10435	COG1609	Transcriptional regulator
DK877_RS10440	COG1126	abc transporter atp-binding protein
DK877_RS10445	COG0765	amino acid transport
DK877_RS10450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS10455	COG3942	CHAP domain
DK877_RS10460	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DK877_RS10470	COG1447	Phosphotransferase system cellobiose-specific component IIA
DK877_RS10480	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DK877_RS10480	COG3711	transcriptional antiterminator
DK877_RS10490	COG2723	6-phospho-beta-galactosidase activity
DK877_RS10495	COG1486	melibiose metabolic process
DK877_RS10505	COG3590	peptidase
DK877_RS10510	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DK877_RS10515	COG1321	iron dependent repressor
DK877_RS10515	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DK877_RS10520	COG1121	(ABC) transporter
DK877_RS10530	COG0803	Belongs to the bacterial solute-binding protein 9 family
DK877_RS10545	COG1490	D-aminoacyl-tRNA deacylase activity
DK877_RS10555	COG0737	Belongs to the 5'-nucleotidase family
DK877_RS10575	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DK877_RS10595	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DK877_RS10620	COG0737	Belongs to the 5'-nucleotidase family
DK877_RS10625	COG1328	CTP reductase activity
DK877_RS10630	COG1126	abc transporter atp-binding protein
DK877_RS10640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DK877_RS10645	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DK877_RS10660	COG1438	arginine binding
DK877_RS10665	COG0018	arginyl-trna synthetase
DK877_RS10685	COG1640	4-alpha-glucanotransferase
DK877_RS10690	COG2182	Extracellular solute-binding protein
DK877_RS10695	COG1175	transmembrane transport
DK877_RS10700	COG3833	ABC-type maltose transport systems, permease component
DK877_RS10705	COG5521	maltodextrose utilization protein MalA
DK877_RS10710	COG1609	Transcriptional regulator
DK877_RS10715	COG1523	belongs to the glycosyl hydrolase 13 family
DK877_RS10720	COG1780	Probably involved in ribonucleotide reductase function
DK877_RS10725	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DK877_RS10730	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DK877_RS10735	COG2153	protein acetylation
DK877_RS10740	COG4989	oxidoreductase activity
DK877_RS10745	COG1216	Glycosyl transferase, family 2
DK877_RS10765	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DK877_RS10775	COG0305	Participates in initiation and elongation during chromosome replication
DK877_RS10780	COG0359	binds to the 23S rRNA
DK877_RS10790	COG0445	tRNA wobble uridine modification
DK877_RS10795	COG0494	nUDIX hydrolase
DK877_RS10800	COG1733	regulation of RNA biosynthetic process
DK877_RS10810	COG0482	sulfurtransferase activity
DK877_RS10815	COG1760	l-serine dehydratase
DK877_RS10820	COG1760	l-serine dehydratase
DK877_RS10830	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DK877_RS10835	COG1122	ATPase activity
DK877_RS10840	COG1122	ATPase activity
DK877_RS10845	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DK877_RS10850	COG1426	Protein conserved in bacteria
DK877_RS10855	COG0612	Peptidase, M16
DK877_RS10860	COG0612	Peptidase, M16
DK877_RS10950	COG0582	viral genome integration into host DNA
DK877_RS10960	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DK877_RS10970	COG0517	IMP dehydrogenase activity
DK877_RS10970	COG0516	GMP reductase activity
DK877_RS10980	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DK877_RS10985	COG0488	(ABC) transporter
DK877_RS11015	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DK877_RS11020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DK877_RS11025	COG1475	DNA binding