A9494_RS00005	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9494_RS00010	SM00480	DNA polymerase III beta subunit
A9494_RS00025	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS00040	SM00487	DEAD-like helicases superfamily
A9494_RS00040	SM00490	helicase superfamily c-terminal domain
A9494_RS00040	SM00982	A9494_RS00040
A9494_RS00040	SM01058	CarD-like/TRCF domain
A9494_RS00045	SM00363	S4 RNA-binding domain
A9494_RS00065	SM00977	TilS substrate C-terminal domain
A9494_RS00075	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00205	SM01400	A9494_RS00205
A9494_RS00235	SM01211	A9494_RS00235
A9494_RS00255	SM00798	AICARFT/IMPCHase bienzyme
A9494_RS00255	SM00851	MGS-like domain
A9494_RS00260	SM01209	A9494_RS00260
A9494_RS00260	SM01210	A9494_RS00260
A9494_RS00265	SM01001	AIR carboxylase
A9494_RS00285	SM00998	Adenylosuccinate lyase C-terminus
A9494_RS00310	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00320	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00325	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00340	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS00375	SM00853	MutL C terminal dimerisation domain
A9494_RS00375	SM01340	A9494_RS00375
A9494_RS00380	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9494_RS00395	SM00852	Probable molybdopterin binding domain
A9494_RS00400	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00415	SM00732	Likely ribonuclease with RNase H fold.
A9494_RS00440	SM01403	A9494_RS00440
A9494_RS00460	SM01382	A9494_RS00460
A9494_RS00460	SM01383	A9494_RS00460
A9494_RS00475	SM00322	K homology RNA-binding domain
A9494_RS00495	SM01374	A9494_RS00495
A9494_RS00500	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9494_RS00565	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS00585	SM00662	RNA polymerases D
A9494_RS00730	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS00735	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00770	SM00363	S4 RNA-binding domain
A9494_RS00790	SM00663	RNA polymerase I subunit A N-terminus
A9494_RS00805	SM00382	ATPases associated with a variety of cellular activities
A9494_RS00900	SM00883	Chaperonin 10 Kd subunit
A9494_RS00920	SM00838	Elongation factor G C-terminus
A9494_RS00920	SM00889	Elongation factor G, domain IV
A9494_RS00930	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9494_RS00945	SM00422	helix_turn_helix, mercury resistance
A9494_RS00950	SM01230	A9494_RS00950
A9494_RS00955	SM00849	Metallo-beta-lactamase superfamily
A9494_RS00980	SM00342	helix_turn_helix, arabinose operon control protein
A9494_RS01040	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01080	SM00861	Transketolase, pyrimidine binding domain
A9494_RS01100	SM01208	A9494_RS01100
A9494_RS01110	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A9494_RS01110	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
A9494_RS01150	SM00478	endonuclease III
A9494_RS01175	SM00710	Parallel beta-helix repeats
A9494_RS01190	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01195	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS01240	SM00257	Lysin motif
A9494_RS01245	SM00642	Alpha-amylase domain
A9494_RS01255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS01255	SM00866	A9494_RS01255
A9494_RS01270	SM00463	Small MutS-related domain
A9494_RS01270	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9494_RS01270	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9494_RS01295	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS01310	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01335	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A9494_RS01345	SM00854	Bacterial capsule synthesis protein PGA_cap
A9494_RS01365	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01460	SM00829	Enoylreductase
A9494_RS01475	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01480	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01495	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01525	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01530	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01545	SM00855	Phosphoglycerate mutase family
A9494_RS01565	SM00271	DnaJ molecular chaperone homology domain
A9494_RS01585	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS01595	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS01650	SM00829	Enoylreductase
A9494_RS01765	SM00487	DEAD-like helicases superfamily
A9494_RS01765	SM00490	helicase superfamily c-terminal domain
A9494_RS01770	SM00870	A9494_RS01770
A9494_RS01825	SM00845	GatB domain
A9494_RS01830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9494_RS01835	SM00354	helix_turn _helix lactose operon repressor
A9494_RS01880	SM01103	A9494_RS01880
A9494_RS01890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9494_RS01935	SM00422	helix_turn_helix, mercury resistance
A9494_RS01955	SM00860	SMI1 / KNR4 family
A9494_RS01965	SM00382	ATPases associated with a variety of cellular activities
A9494_RS01965	SM01086	C-terminal, D2-small domain, of ClpB protein
A9494_RS01980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS01980	SM00866	A9494_RS01980
A9494_RS02025	SM00450	Rhodanese Homology Domain
A9494_RS02035	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02045	SM00357	Cold shock protein domain
A9494_RS02080	SM00981	A9494_RS02080
A9494_RS02095	SM00322	K homology RNA-binding domain
A9494_RS02095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9494_RS02100	SM00072	Guanylate kinase homologues.
A9494_RS02105	SM01409	A9494_RS02105
A9494_RS02110	SM00487	DEAD-like helicases superfamily
A9494_RS02110	SM00490	helicase superfamily c-terminal domain
A9494_RS02125	SM00331	Sigma factor PP2C-like phosphatases
A9494_RS02125	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9494_RS02130	SM00220	Serine/Threonine protein kinases, catalytic domain
A9494_RS02130	SM00740	A9494_RS02130
A9494_RS02140	SM00387	Histidine kinase-like ATPases
A9494_RS02145	SM00421	helix_turn_helix, Lux Regulon
A9494_RS02145	SM00448	cheY-homologous receiver domain
A9494_RS02155	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS02170	SM00487	DEAD-like helicases superfamily
A9494_RS02170	SM00490	helicase superfamily c-terminal domain
A9494_RS02270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS02270	SM00866	A9494_RS02270
A9494_RS02275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS02275	SM00866	A9494_RS02275
A9494_RS02345	SM00487	DEAD-like helicases superfamily
A9494_RS02355	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS02370	SM00838	Elongation factor G C-terminus
A9494_RS02430	SM00842	Cell division protein FtsA
A9494_RS02435	SM00864	Tubulin/FtsZ family, GTPase domain
A9494_RS02435	SM00865	Tubulin/FtsZ family, C-terminal domain
A9494_RS02455	SM00363	S4 RNA-binding domain
A9494_RS02485	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02485	SM01086	C-terminal, D2-small domain, of ClpB protein
A9494_RS02500	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02545	SM00422	helix_turn_helix, mercury resistance
A9494_RS02600	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02625	SM00855	Phosphoglycerate mutase family
A9494_RS02695	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9494_RS02725	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS02735	SM00481	DNA polymerase alpha chain like domain
A9494_RS02780	SM00382	ATPases associated with a variety of cellular activities
A9494_RS02785	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS02795	SM00849	Metallo-beta-lactamase superfamily
A9494_RS02800	SM00479	A9494_RS02800
A9494_RS02800	SM00487	DEAD-like helicases superfamily
A9494_RS02800	SM00491	A9494_RS02800
A9494_RS02805	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A9494_RS02830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS02925	SM00858	A9494_RS02925
A9494_RS03050	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS03120	SM00100	Cyclic nucleotide-monophosphate binding domain
A9494_RS03120	SM00419	helix_turn_helix, cAMP Regulatory protein
A9494_RS03230	SM00363	S4 RNA-binding domain
A9494_RS03255	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03265	SM00563	Phosphate acyltransferases
A9494_RS03270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9494_RS03275	SM00849	Metallo-beta-lactamase superfamily
A9494_RS03280	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9494_RS03460	SM00487	DEAD-like helicases superfamily
A9494_RS03510	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9494_RS03510	SM01134	A9494_RS03510
A9494_RS03555	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A9494_RS03560	SM01130	A9494_RS03560
A9494_RS03640	SM00100	Cyclic nucleotide-monophosphate binding domain
A9494_RS03660	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03665	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03700	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03705	SM00465	GIY-YIG type nucleases (URI domain)
A9494_RS03740	SM01207	A9494_RS03740
A9494_RS03745	SM00387	Histidine kinase-like ATPases
A9494_RS03745	SM00433	TopoisomeraseII
A9494_RS03770	SM00434	DNA Topoisomerase IV
A9494_RS03800	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS03830	SM00981	A9494_RS03830
A9494_RS03865	SM00363	S4 RNA-binding domain
A9494_RS03890	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9494_RS03895	SM00851	MGS-like domain
A9494_RS03895	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9494_RS03895	SM01209	A9494_RS03895
A9494_RS03925	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03930	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03955	SM00382	ATPases associated with a variety of cellular activities
A9494_RS03995	SM00478	endonuclease III
A9494_RS04000	SM01240	A9494_RS04000
A9494_RS04025	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9494_RS04025	SM01134	A9494_RS04025
A9494_RS04060	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04100	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04100	SM00994	ClpX C4-type zinc finger
A9494_RS04100	SM01086	C-terminal, D2-small domain, of ClpB protein
A9494_RS04110	SM00562	A9494_RS04110
A9494_RS04115	SM00910	A9494_RS04115
A9494_RS04120	SM00838	Elongation factor G C-terminus
A9494_RS04130	SM00894	Excalibur calcium-binding domain
A9494_RS04145	SM00937	A9494_RS04145
A9494_RS04190	SM00910	A9494_RS04190
A9494_RS04205	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS04220	SM00866	A9494_RS04220
A9494_RS04230	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04230	SM00962	SRP54-type protein, GTPase domain
A9494_RS04230	SM00963	SRP54-type protein, helical bundle domain
A9494_RS04270	SM00387	Histidine kinase-like ATPases
A9494_RS04275	SM00448	cheY-homologous receiver domain
A9494_RS04275	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS04295	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04310	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04345	SM00342	helix_turn_helix, arabinose operon control protein
A9494_RS04345	SM00871	Bacterial transcription activator, effector binding domain
A9494_RS04370	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS04375	SM00387	Histidine kinase-like ATPases
A9494_RS04375	SM00388	His Kinase A (phosphoacceptor) domain
A9494_RS04380	SM00448	cheY-homologous receiver domain
A9494_RS04380	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS04395	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04400	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04450	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS04460	SM00889	Elongation factor G, domain IV
A9494_RS04505	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS04555	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS04575	SM00400	zinc finger
A9494_RS04585	SM00421	helix_turn_helix, Lux Regulon
A9494_RS04585	SM00448	cheY-homologous receiver domain
A9494_RS04605	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04610	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04625	SM00487	DEAD-like helicases superfamily
A9494_RS04625	SM00490	helicase superfamily c-terminal domain
A9494_RS04740	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9494_RS04740	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9494_RS04740	SM00493	A9494_RS04740
A9494_RS04750	SM01266	A9494_RS04750
A9494_RS04760	SM00450	Rhodanese Homology Domain
A9494_RS04765	SM00450	Rhodanese Homology Domain
A9494_RS04815	SM00986	Uracil DNA glycosylase superfamily
A9494_RS04815	SM00987	UreE urease accessory protein, C-terminal domain 
A9494_RS04835	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9494_RS04870	SM00642	Alpha-amylase domain
A9494_RS04875	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS04875	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9494_RS04880	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS04880	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9494_RS04895	SM01208	A9494_RS04895
A9494_RS04910	SM00487	DEAD-like helicases superfamily
A9494_RS04910	SM00490	helicase superfamily c-terminal domain
A9494_RS04915	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS04915	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9494_RS04920	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04930	SM00382	ATPases associated with a variety of cellular activities
A9494_RS04970	SM01061	CAT RNA binding domain
A9494_RS04975	SM01133	A9494_RS04975
A9494_RS05000	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9494_RS05000	SM01134	A9494_RS05000
A9494_RS05035	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS05040	SM00478	endonuclease III
A9494_RS05050	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05055	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05075	SM00954	Region found in RelA / SpoT proteins
A9494_RS05080	SM01118	A9494_RS05080
A9494_RS05085	SM01400	A9494_RS05085
A9494_RS05105	SM00881	CoA binding domain
A9494_RS05125	SM00434	DNA Topoisomerase IV
A9494_RS05150	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05165	SM01133	A9494_RS05165
A9494_RS05170	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A9494_RS05190	SM01321	A9494_RS05190
A9494_RS05195	SM00460	Transglutaminase/protease-like homologues
A9494_RS05205	SM00387	Histidine kinase-like ATPases
A9494_RS05205	SM00388	His Kinase A (phosphoacceptor) domain
A9494_RS05210	SM00448	cheY-homologous receiver domain
A9494_RS05210	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS05230	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05235	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05280	SM00904	Riboflavin kinase
A9494_RS05390	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS05420	SM00905	Dihydroneopterin aldolase
A9494_RS05460	SM00873	B3/4 domain
A9494_RS05460	SM00874	tRNA synthetase B5 domain
A9494_RS05460	SM00896	Ferredoxin-fold anticodon binding domain
A9494_RS05510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9494_RS05510	SM00895	A9494_RS05510
A9494_RS05530	SM00892	DNA/RNA non-specific endonuclease
A9494_RS05555	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05590	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9494_RS05595	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9494_RS05595	SM00292	breast cancer carboxy-terminal domain
A9494_RS05595	SM00532	Ligase N family
A9494_RS05625	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05625	SM00962	SRP54-type protein, GTPase domain
A9494_RS05625	SM00963	SRP54-type protein, helical bundle domain
A9494_RS05640	SM00968	SMC proteins Flexible Hinge Domain
A9494_RS05645	SM00358	Double-stranded RNA binding motif
A9494_RS05645	SM00535	Ribonuclease III family
A9494_RS05655	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9494_RS05685	SM01329	A9494_RS05685
A9494_RS05720	SM00354	helix_turn _helix lactose operon repressor
A9494_RS05750	SM01323	A9494_RS05750
A9494_RS05835	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS05860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9494_RS05935	SM00382	ATPases associated with a variety of cellular activities
A9494_RS05960	SM01133	A9494_RS05960
A9494_RS06095	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06120	SM00047	Lysozyme subfamily 2
A9494_RS06125	SM00646	A9494_RS06125
A9494_RS06205	SM00155	Phospholipase D. Active site motifs.
A9494_RS06210	SM00631	A9494_RS06210
A9494_RS06310	SM00649	Ribosomal protein L11/L12
A9494_RS06325	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06325	SM00843	A9494_RS06325
A9494_RS06330	SM00640	Glycosyl hydrolases family 32
A9494_RS06350	SM00354	helix_turn _helix lactose operon repressor
A9494_RS06410	SM00493	A9494_RS06410
A9494_RS06420	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06430	SM00849	Metallo-beta-lactamase superfamily
A9494_RS06435	SM00091	PAS domain
A9494_RS06435	SM00387	Histidine kinase-like ATPases
A9494_RS06435	SM00388	His Kinase A (phosphoacceptor) domain
A9494_RS06440	SM00448	cheY-homologous receiver domain
A9494_RS06440	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS06445	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06450	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS06465	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9494_RS06495	SM00354	helix_turn _helix lactose operon repressor
A9494_RS06515	SM00881	CoA binding domain
A9494_RS06525	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9494_RS06525	SM00474	3'-5' exonuclease
A9494_RS06525	SM00475	5'-3' exonuclease
A9494_RS06525	SM00482	DNA polymerase A domain
A9494_RS06540	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06570	SM00829	Enoylreductase
A9494_RS06580	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS06580	SM00955	A9494_RS06580
A9494_RS06610	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9494_RS06610	SM01232	A9494_RS06610
A9494_RS06655	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06660	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06675	SM00899	A9494_RS06675
A9494_RS06695	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06700	SM00937	A9494_RS06700
A9494_RS06735	SM00831	Cation transporter/ATPase, N-terminus
A9494_RS06760	SM01321	A9494_RS06760
A9494_RS06785	SM00400	zinc finger
A9494_RS06785	SM00493	A9494_RS06785
A9494_RS06825	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9494_RS06880	SM00487	DEAD-like helicases superfamily
A9494_RS06900	SM00244	prohibitin homologues
A9494_RS06915	SM00986	Uracil DNA glycosylase superfamily
A9494_RS06915	SM00987	UreE urease accessory protein, C-terminal domain 
A9494_RS06955	SM00382	ATPases associated with a variety of cellular activities
A9494_RS06995	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS07010	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07030	SM00849	Metallo-beta-lactamase superfamily
A9494_RS07045	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07070	SM01061	CAT RNA binding domain
A9494_RS07085	SM00028	Tetratricopeptide repeats
A9494_RS07120	SM01192	A9494_RS07120
A9494_RS07120	SM01193	A9494_RS07120
A9494_RS07160	SM00387	Histidine kinase-like ATPases
A9494_RS07160	SM00433	TopoisomeraseII
A9494_RS07185	SM00885	D5 N terminal like
A9494_RS07250	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS07290	SM00830	Chorismate mutase type II
A9494_RS07330	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07335	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07370	SM00642	Alpha-amylase domain
A9494_RS07375	SM00642	Alpha-amylase domain
A9494_RS07400	SM00342	helix_turn_helix, arabinose operon control protein
A9494_RS07460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9494_RS07465	SM00487	DEAD-like helicases superfamily
A9494_RS07465	SM00490	helicase superfamily c-terminal domain
A9494_RS07485	SM00365	Leucine-rich repeat, SDS22-like subfamily
A9494_RS07525	SM01022	A9494_RS07525
A9494_RS07560	SM01321	A9494_RS07560
A9494_RS07570	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07575	SM00387	Histidine kinase-like ATPases
A9494_RS07580	SM00448	cheY-homologous receiver domain
A9494_RS07580	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS07605	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07610	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS07660	SM00731	SprT homologues.
A9494_RS07665	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS07740	SM00382	ATPases associated with a variety of cellular activities
A9494_RS07770	SM00487	DEAD-like helicases superfamily
A9494_RS07770	SM00490	helicase superfamily c-terminal domain
A9494_RS07790	SM00855	Phosphoglycerate mutase family
A9494_RS07830	SM00411	bacterial (prokaryotic) histone like domain
A9494_RS07860	SM00363	S4 RNA-binding domain
A9494_RS07890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9494_RS07890	SM00387	Histidine kinase-like ATPases
A9494_RS07890	SM00388	His Kinase A (phosphoacceptor) domain
A9494_RS07895	SM00448	cheY-homologous receiver domain
A9494_RS07895	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS07905	SM00327	von Willebrand factor (vWF) type A domain
A9494_RS07920	SM01131	A9494_RS07920
A9494_RS07935	SM01091	Transporter associated domain
A9494_RS07940	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08000	SM00450	Rhodanese Homology Domain
A9494_RS08010	SM00421	helix_turn_helix, Lux Regulon
A9494_RS08010	SM00448	cheY-homologous receiver domain
A9494_RS08025	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08040	SM00226	Low molecular weight phosphatase family
A9494_RS08045	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
A9494_RS08055	SM00014	Acid phosphatase homologues
A9494_RS08075	SM01234	A9494_RS08075
A9494_RS08080	SM00363	S4 RNA-binding domain
A9494_RS08145	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9494_RS08185	SM00487	DEAD-like helicases superfamily
A9494_RS08185	SM00490	helicase superfamily c-terminal domain
A9494_RS08235	SM00448	cheY-homologous receiver domain
A9494_RS08235	SM00862	Transcriptional regulatory protein, C terminal
A9494_RS08240	SM01350	A9494_RS08240
A9494_RS08260	SM00487	DEAD-like helicases superfamily
A9494_RS08260	SM00490	helicase superfamily c-terminal domain
A9494_RS08275	SM00740	A9494_RS08275
A9494_RS08290	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS08335	SM00900	A9494_RS08335
A9494_RS08400	SM00873	B3/4 domain
A9494_RS08410	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08410	SM00930	A9494_RS08410
A9494_RS08485	SM00487	DEAD-like helicases superfamily
A9494_RS08530	SM00878	Biotin carboxylase C-terminal domain
A9494_RS08545	SM00825	Beta-ketoacyl synthase
A9494_RS08550	SM00822	A9494_RS08550
A9494_RS08555	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9494_RS08575	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS08600	SM01005	Alanine racemase, C-terminal domain
A9494_RS08610	SM00957	SecA DEAD-like domain
A9494_RS08610	SM00958	SecA preprotein cross-linking domain
A9494_RS08630	SM00640	Glycosyl hydrolases family 32
A9494_RS08635	SM00354	helix_turn _helix lactose operon repressor
A9494_RS08650	SM00841	Elongation factor P, C-terminal
A9494_RS08650	SM01185	A9494_RS08650
A9494_RS08660	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08720	SM00861	Transketolase, pyrimidine binding domain
A9494_RS08765	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS08765	SM00322	K homology RNA-binding domain
A9494_RS08795	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08825	SM01120	A9494_RS08825
A9494_RS08825	SM01121	A9494_RS08825
A9494_RS08850	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08855	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08865	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9494_RS08890	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08910	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS08915	SM00382	ATPases associated with a variety of cellular activities
A9494_RS08925	SM00244	prohibitin homologues
A9494_RS09005	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9494_RS09010	SM00740	A9494_RS09010
A9494_RS09030	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09040	SM00342	helix_turn_helix, arabinose operon control protein
A9494_RS09040	SM00448	cheY-homologous receiver domain
A9494_RS09090	SM00872	Alpha mannosidase, middle domain
A9494_RS09095	SM01149	A9494_RS09095
A9494_RS09105	SM01208	A9494_RS09105
A9494_RS09115	SM00840	A9494_RS09115
A9494_RS09135	SM00316	Ribosomal protein S1-like RNA-binding domain
A9494_RS09135	SM00322	K homology RNA-binding domain
A9494_RS09175	SM01387	A9494_RS09175
A9494_RS09195	SM00363	S4 RNA-binding domain
A9494_RS09235	SM01329	A9494_RS09235
A9494_RS09240	SM00917	LeuA allosteric (dimerisation) domain
A9494_RS09265	SM00479	A9494_RS09265
A9494_RS09265	SM00481	DNA polymerase alpha chain like domain
A9494_RS09285	SM01120	A9494_RS09285
A9494_RS09320	SM01323	A9494_RS09320
A9494_RS09325	SM00788	Adenylosuccinate synthetase
A9494_RS09365	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09365	SM01086	C-terminal, D2-small domain, of ClpB protein
A9494_RS09410	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9494_RS09410	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9494_RS09460	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A9494_RS09480	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09490	SM00530	Helix-turn-helix XRE-family like proteins 
A9494_RS09510	SM00650	Ribosomal RNA adenine dimethylases
A9494_RS09550	SM00493	A9494_RS09550
A9494_RS09565	SM00393	Putative single-stranded nucleic acids-binding domain
A9494_RS09565	SM01245	A9494_RS09565
A9494_RS09635	SM00850	LytTr DNA-binding domain
A9494_RS09645	SM00947	Carbonic anhydrase
A9494_RS09650	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09655	SM00855	Phosphoglycerate mutase family
A9494_RS09665	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09670	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09675	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9494_RS09745	SM00861	Transketolase, pyrimidine binding domain
A9494_RS09765	SM01007	Class II Aldolase and Adducin N-terminal domain
A9494_RS09775	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9494_RS09795	SM00642	Alpha-amylase domain
A9494_RS09795	SM01208	A9494_RS09795
A9494_RS09800	SM00354	helix_turn _helix lactose operon repressor
A9494_RS09805	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09815	SM00062	Bacterial periplasmic substrate-binding proteins
A9494_RS09885	SM00382	ATPases associated with a variety of cellular activities
A9494_RS09905	SM00529	Helix-turn-helix diphteria tox regulatory element
A9494_RS09905	SM00899	A9494_RS09905
A9494_RS09940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9494_RS09940	SM00954	Region found in RelA / SpoT proteins
A9494_RS10015	SM01022	A9494_RS10015
A9494_RS10030	SM00382	ATPases associated with a variety of cellular activities
A9494_RS10090	SM00850	LytTr DNA-binding domain
A9494_RS10095	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9494_RS10095	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9494_RS10105	SM00836	DALR anticodon binding domain
A9494_RS10105	SM01016	Arginyl tRNA synthetase N terminal dom
A9494_RS10110	SM00287	Bacterial SH3 domain homologues
A9494_RS10150	SM00354	helix_turn _helix lactose operon repressor
A9494_RS10155	SM00642	Alpha-amylase domain
A9494_RS10190	SM01217	A9494_RS10190
A9494_RS10205	SM00448	cheY-homologous receiver domain
A9494_RS10205	SM00850	LytTr DNA-binding domain
A9494_RS10230	SM00363	S4 RNA-binding domain
A9494_RS10230	SM01390	A9494_RS10230
A9494_RS10260	SM01228	A9494_RS10260
A9494_RS10305	SM00257	Lysin motif
A9494_RS10315	SM00382	ATPases associated with a variety of cellular activities
A9494_RS10320	SM00382	ATPases associated with a variety of cellular activities
A9494_RS10355	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9494_RS10355	SM01240	A9494_RS10355
A9494_RS10370	SM00382	ATPases associated with a variety of cellular activities
A9494_RS10410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9494_RS10415	SM00470	ParB-like nuclease domain
