APQ97_RS00010 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain APQ97_RS00015 SM00480 DNA polymerase III beta subunit APQ97_RS00030 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS00045 SM00487 DEAD-like helicases superfamily APQ97_RS00045 SM00490 helicase superfamily c-terminal domain APQ97_RS00045 SM00982 APQ97_RS00045 APQ97_RS00045 SM01058 CarD-like/TRCF domain APQ97_RS00050 SM00363 S4 RNA-binding domain APQ97_RS00070 SM00977 TilS substrate C-terminal domain APQ97_RS00080 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00175 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS00175 SM00866 APQ97_RS00175 APQ97_RS00180 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS00180 SM00866 APQ97_RS00180 APQ97_RS00255 SM00487 DEAD-like helicases superfamily APQ97_RS00255 SM00490 helicase superfamily c-terminal domain APQ97_RS00275 SM00838 Elongation factor G C-terminus APQ97_RS00305 SM00853 MutL C terminal dimerisation domain APQ97_RS00305 SM01340 APQ97_RS00305 APQ97_RS00310 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APQ97_RS00320 SM00852 Probable molybdopterin binding domain APQ97_RS00325 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00340 SM00732 Likely ribonuclease with RNase H fold. APQ97_RS00360 SM01403 APQ97_RS00360 APQ97_RS00380 SM01382 APQ97_RS00380 APQ97_RS00380 SM01383 APQ97_RS00380 APQ97_RS00395 SM00322 K homology RNA-binding domain APQ97_RS00415 SM01374 APQ97_RS00415 APQ97_RS00420 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APQ97_RS00485 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS00505 SM00662 RNA polymerases D APQ97_RS00650 SM01400 APQ97_RS00650 APQ97_RS00680 SM01211 APQ97_RS00680 APQ97_RS00700 SM00798 AICARFT/IMPCHase bienzyme APQ97_RS00700 SM00851 MGS-like domain APQ97_RS00725 SM01209 APQ97_RS00725 APQ97_RS00725 SM01210 APQ97_RS00725 APQ97_RS00730 SM01001 AIR carboxylase APQ97_RS00745 SM00998 Adenylosuccinate lyase C-terminus APQ97_RS00750 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00775 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00785 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00790 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00805 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS00820 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00865 SM00382 ATPases associated with a variety of cellular activities APQ97_RS00875 SM01022 APQ97_RS00875 APQ97_RS00915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APQ97_RS00915 SM00954 Region found in RelA / SpoT proteins APQ97_RS00935 SM00529 Helix-turn-helix diphteria tox regulatory element APQ97_RS00935 SM00899 APQ97_RS00935 APQ97_RS00950 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01020 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS01030 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01035 SM00354 helix_turn _helix lactose operon repressor APQ97_RS01040 SM00642 Alpha-amylase domain APQ97_RS01060 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APQ97_RS01070 SM01007 Class II Aldolase and Adducin N-terminal domain APQ97_RS01090 SM00861 Transketolase, pyrimidine binding domain APQ97_RS01155 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS01160 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01165 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01175 SM00855 Phosphoglycerate mutase family APQ97_RS01180 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01185 SM00947 Carbonic anhydrase APQ97_RS01195 SM00850 LytTr DNA-binding domain APQ97_RS01255 SM00393 Putative single-stranded nucleic acids-binding domain APQ97_RS01255 SM01245 APQ97_RS01255 APQ97_RS01270 SM00493 APQ97_RS01270 APQ97_RS01300 SM00650 Ribosomal RNA adenine dimethylases APQ97_RS01315 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS01325 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01330 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01355 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain APQ97_RS01380 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS01385 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01440 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APQ97_RS01440 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APQ97_RS01490 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01490 SM01086 C-terminal, D2-small domain, of ClpB protein APQ97_RS01535 SM00788 Adenylosuccinate synthetase APQ97_RS01540 SM01323 APQ97_RS01540 APQ97_RS01575 SM01120 APQ97_RS01575 APQ97_RS01595 SM00479 APQ97_RS01595 APQ97_RS01595 SM00481 DNA polymerase alpha chain like domain APQ97_RS01620 SM00917 LeuA allosteric (dimerisation) domain APQ97_RS01660 SM00363 S4 RNA-binding domain APQ97_RS01715 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01720 SM01387 APQ97_RS01720 APQ97_RS01725 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS01725 SM00322 K homology RNA-binding domain APQ97_RS01745 SM00840 APQ97_RS01745 APQ97_RS01760 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01775 SM00967 RNA 2'-O ribose methyltransferase substrate binding APQ97_RS01825 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS01905 SM00244 prohibitin homologues APQ97_RS01915 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01920 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS01945 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01970 SM00936 Penicillin-binding protein 5, C-terminal domain APQ97_RS01980 SM00382 ATPases associated with a variety of cellular activities APQ97_RS01985 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02010 SM01120 APQ97_RS02010 APQ97_RS02010 SM01121 APQ97_RS02010 APQ97_RS02040 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02065 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS02065 SM00322 K homology RNA-binding domain APQ97_RS02110 SM00861 Transketolase, pyrimidine binding domain APQ97_RS02130 SM01061 CAT RNA binding domain APQ97_RS02150 SM00342 helix_turn_helix, arabinose operon control protein APQ97_RS02210 SM00855 Phosphoglycerate mutase family APQ97_RS02215 SM00855 Phosphoglycerate mutase family APQ97_RS02255 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02265 SM00841 Elongation factor P, C-terminal APQ97_RS02265 SM01185 APQ97_RS02265 APQ97_RS02280 SM00354 helix_turn _helix lactose operon repressor APQ97_RS02285 SM00640 Glycosyl hydrolases family 32 APQ97_RS02305 SM00957 SecA DEAD-like domain APQ97_RS02305 SM00958 SecA preprotein cross-linking domain APQ97_RS02315 SM01005 Alanine racemase, C-terminal domain APQ97_RS02345 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS02365 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APQ97_RS02370 SM00822 APQ97_RS02370 APQ97_RS02375 SM00825 Beta-ketoacyl synthase APQ97_RS02390 SM00878 Biotin carboxylase C-terminal domain APQ97_RS02445 SM00487 DEAD-like helicases superfamily APQ97_RS02535 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02535 SM00930 APQ97_RS02535 APQ97_RS02545 SM00873 B3/4 domain APQ97_RS02605 SM00900 APQ97_RS02605 APQ97_RS02645 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS02660 SM00740 APQ97_RS02660 APQ97_RS02675 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02680 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APQ97_RS02725 SM01232 APQ97_RS02725 APQ97_RS02750 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS02750 SM00955 APQ97_RS02750 APQ97_RS02760 SM00829 Enoylreductase APQ97_RS02790 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02810 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APQ97_RS02810 SM00474 3'-5' exonuclease APQ97_RS02810 SM00475 5'-3' exonuclease APQ97_RS02810 SM00482 DNA polymerase A domain APQ97_RS02820 SM00881 CoA binding domain APQ97_RS02840 SM00354 helix_turn _helix lactose operon repressor APQ97_RS02870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APQ97_RS02885 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS02890 SM00382 ATPases associated with a variety of cellular activities APQ97_RS02895 SM00448 cheY-homologous receiver domain APQ97_RS02895 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS02900 SM00091 PAS domain APQ97_RS02900 SM00387 Histidine kinase-like ATPases APQ97_RS02900 SM00388 His Kinase A (phosphoacceptor) domain APQ97_RS02905 SM00849 Metallo-beta-lactamase superfamily APQ97_RS02930 SM00493 APQ97_RS02930 APQ97_RS02950 SM00382 ATPases associated with a variety of cellular activities APQ97_RS03000 SM00354 helix_turn _helix lactose operon repressor APQ97_RS03020 SM00640 Glycosyl hydrolases family 32 APQ97_RS03025 SM00382 ATPases associated with a variety of cellular activities APQ97_RS03025 SM00843 APQ97_RS03025 APQ97_RS03040 SM00649 Ribosomal protein L11/L12 APQ97_RS03145 SM00631 APQ97_RS03145 APQ97_RS03150 SM00155 Phospholipase D. Active site motifs. APQ97_RS03225 SM00646 APQ97_RS03225 APQ97_RS03230 SM00047 Lysozyme subfamily 2 APQ97_RS03255 SM00382 ATPases associated with a variety of cellular activities APQ97_RS03405 SM01103 APQ97_RS03405 APQ97_RS03415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APQ97_RS03505 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS03570 SM00100 Cyclic nucleotide-monophosphate binding domain APQ97_RS03570 SM00419 helix_turn_helix, cAMP Regulatory protein APQ97_RS03705 SM00363 S4 RNA-binding domain APQ97_RS03730 SM00382 ATPases associated with a variety of cellular activities APQ97_RS03740 SM00563 Phosphate acyltransferases APQ97_RS03745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APQ97_RS03750 SM00849 Metallo-beta-lactamase superfamily APQ97_RS03760 SM00116 Domain in cystathionine beta-synthase and other proteins. APQ97_RS03880 SM00974 APQ97_RS03880 APQ97_RS03960 SM00420 helix_turn_helix, Deoxyribose operon repressor APQ97_RS03960 SM01134 APQ97_RS03960 APQ97_RS04005 SM00859 Semialdehyde dehydrogenase, NAD binding domain APQ97_RS04010 SM01130 APQ97_RS04010 APQ97_RS04085 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04090 SM00465 GIY-YIG type nucleases (URI domain) APQ97_RS04125 SM01207 APQ97_RS04125 APQ97_RS04130 SM00387 Histidine kinase-like ATPases APQ97_RS04130 SM00433 TopoisomeraseII APQ97_RS04150 SM00434 DNA Topoisomerase IV APQ97_RS04180 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS04210 SM00981 APQ97_RS04210 APQ97_RS04250 SM00363 S4 RNA-binding domain APQ97_RS04275 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APQ97_RS04280 SM00851 MGS-like domain APQ97_RS04280 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APQ97_RS04280 SM01209 APQ97_RS04280 APQ97_RS04310 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04315 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04345 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04385 SM00478 endonuclease III APQ97_RS04390 SM01240 APQ97_RS04390 APQ97_RS04415 SM00420 helix_turn_helix, Deoxyribose operon repressor APQ97_RS04415 SM01134 APQ97_RS04415 APQ97_RS04450 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04490 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04490 SM00994 ClpX C4-type zinc finger APQ97_RS04490 SM01086 C-terminal, D2-small domain, of ClpB protein APQ97_RS04500 SM00562 APQ97_RS04500 APQ97_RS04505 SM00838 Elongation factor G C-terminus APQ97_RS04515 SM00894 Excalibur calcium-binding domain APQ97_RS04535 SM00937 APQ97_RS04535 APQ97_RS04580 SM00910 APQ97_RS04580 APQ97_RS04595 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04610 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS04610 SM00866 APQ97_RS04610 APQ97_RS04620 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04620 SM00962 SRP54-type protein, GTPase domain APQ97_RS04620 SM00963 SRP54-type protein, helical bundle domain APQ97_RS04650 SM00387 Histidine kinase-like ATPases APQ97_RS04655 SM00448 cheY-homologous receiver domain APQ97_RS04655 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS04675 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04715 SM00342 helix_turn_helix, arabinose operon control protein APQ97_RS04715 SM00871 Bacterial transcription activator, effector binding domain APQ97_RS04740 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS04755 SM00382 ATPases associated with a variety of cellular activities APQ97_RS04775 SM00448 cheY-homologous receiver domain APQ97_RS04775 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS04780 SM00387 Histidine kinase-like ATPases APQ97_RS04780 SM00388 His Kinase A (phosphoacceptor) domain APQ97_RS04810 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS04830 SM00400 zinc finger APQ97_RS04835 SM00857 Resolvase, N terminal domain APQ97_RS04850 SM00470 ParB-like nuclease domain APQ97_RS04880 SM00889 Elongation factor G, domain IV APQ97_RS04915 SM00487 DEAD-like helicases superfamily APQ97_RS05025 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APQ97_RS05025 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APQ97_RS05025 SM00493 APQ97_RS05025 APQ97_RS05045 SM00450 Rhodanese Homology Domain APQ97_RS05050 SM00450 Rhodanese Homology Domain APQ97_RS05100 SM00986 Uracil DNA glycosylase superfamily APQ97_RS05100 SM00987 UreE urease accessory protein, C-terminal domain APQ97_RS05120 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APQ97_RS05155 SM00642 Alpha-amylase domain APQ97_RS05160 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS05160 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APQ97_RS05185 SM00487 DEAD-like helicases superfamily APQ97_RS05185 SM00490 helicase superfamily c-terminal domain APQ97_RS05195 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS05195 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APQ97_RS05200 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05210 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05235 SM00857 Resolvase, N terminal domain APQ97_RS05340 SM01007 Class II Aldolase and Adducin N-terminal domain APQ97_RS05350 SM00420 helix_turn_helix, Deoxyribose operon repressor APQ97_RS05350 SM01134 APQ97_RS05350 APQ97_RS05400 SM01061 CAT RNA binding domain APQ97_RS05405 SM01133 APQ97_RS05405 APQ97_RS05425 SM00420 helix_turn_helix, Deoxyribose operon repressor APQ97_RS05425 SM01134 APQ97_RS05425 APQ97_RS05455 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS05460 SM00478 endonuclease III APQ97_RS05470 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05475 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05495 SM00954 Region found in RelA / SpoT proteins APQ97_RS05500 SM01118 APQ97_RS05500 APQ97_RS05505 SM01400 APQ97_RS05505 APQ97_RS05525 SM00881 CoA binding domain APQ97_RS05545 SM00434 DNA Topoisomerase IV APQ97_RS05580 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05595 SM01133 APQ97_RS05595 APQ97_RS05600 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain APQ97_RS05620 SM00460 Transglutaminase/protease-like homologues APQ97_RS05625 SM00387 Histidine kinase-like ATPases APQ97_RS05625 SM00388 His Kinase A (phosphoacceptor) domain APQ97_RS05630 SM00448 cheY-homologous receiver domain APQ97_RS05630 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS05650 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05655 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05700 SM00904 Riboflavin kinase APQ97_RS05795 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS05825 SM00905 Dihydroneopterin aldolase APQ97_RS05865 SM00873 B3/4 domain APQ97_RS05865 SM00874 tRNA synthetase B5 domain APQ97_RS05865 SM00896 Ferredoxin-fold anticodon binding domain APQ97_RS05915 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS05915 SM00895 APQ97_RS05915 APQ97_RS05935 SM00892 DNA/RNA non-specific endonuclease APQ97_RS05960 SM00382 ATPases associated with a variety of cellular activities APQ97_RS05995 SM00046 Diacylglycerol kinase catalytic domain (presumed) APQ97_RS06000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APQ97_RS06000 SM00292 breast cancer carboxy-terminal domain APQ97_RS06000 SM00532 Ligase N family APQ97_RS06030 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06030 SM00962 SRP54-type protein, GTPase domain APQ97_RS06030 SM00963 SRP54-type protein, helical bundle domain APQ97_RS06045 SM00968 SMC proteins Flexible Hinge Domain APQ97_RS06050 SM00358 Double-stranded RNA binding motif APQ97_RS06050 SM00535 Ribonuclease III family APQ97_RS06060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APQ97_RS06085 SM01329 APQ97_RS06085 APQ97_RS06115 SM00354 helix_turn _helix lactose operon repressor APQ97_RS06145 SM01323 APQ97_RS06145 APQ97_RS06225 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS06245 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APQ97_RS06315 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06340 SM01133 APQ97_RS06340 APQ97_RS06350 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS06355 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06405 SM00650 Ribosomal RNA adenine dimethylases APQ97_RS06415 SM00857 Resolvase, N terminal domain APQ97_RS06455 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APQ97_RS06455 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APQ97_RS06455 SM00493 APQ97_RS06455 APQ97_RS06595 SM00481 DNA polymerase alpha chain like domain APQ97_RS06600 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS06605 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06655 SM00400 zinc finger APQ97_RS06655 SM00493 APQ97_RS06655 APQ97_RS06695 SM00729 Elongator protein 3, MiaB family, Radical SAM APQ97_RS06780 SM00244 prohibitin homologues APQ97_RS06795 SM00986 Uracil DNA glycosylase superfamily APQ97_RS06795 SM00987 UreE urease accessory protein, C-terminal domain APQ97_RS06820 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06860 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06870 SM00235 Zinc-dependent metalloprotease APQ97_RS06880 SM00849 Metallo-beta-lactamase superfamily APQ97_RS06910 SM00382 ATPases associated with a variety of cellular activities APQ97_RS06935 SM01061 CAT RNA binding domain APQ97_RS06950 SM00028 Tetratricopeptide repeats APQ97_RS06975 SM01192 APQ97_RS06975 APQ97_RS06975 SM01193 APQ97_RS06975 APQ97_RS07010 SM00387 Histidine kinase-like ATPases APQ97_RS07010 SM00433 TopoisomeraseII APQ97_RS07055 SM00830 Chorismate mutase type II APQ97_RS07070 SM01040 BRO family, N-terminal domain APQ97_RS07085 SM00287 Bacterial SH3 domain homologues APQ97_RS07200 SM00507 HNH nucleases APQ97_RS07320 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07325 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07335 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07355 SM01040 BRO family, N-terminal domain APQ97_RS07370 SM00287 Bacterial SH3 domain homologues APQ97_RS07485 SM00507 HNH nucleases APQ97_RS07605 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07610 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07620 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS07665 SM00382 ATPases associated with a variety of cellular activities APQ97_RS07670 SM00382 ATPases associated with a variety of cellular activities APQ97_RS07705 SM00642 Alpha-amylase domain APQ97_RS07710 SM00642 Alpha-amylase domain APQ97_RS07735 SM00342 helix_turn_helix, arabinose operon control protein APQ97_RS07800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APQ97_RS07805 SM00487 DEAD-like helicases superfamily APQ97_RS07805 SM00490 helicase superfamily c-terminal domain APQ97_RS07850 SM00899 APQ97_RS07850 APQ97_RS07865 SM00382 ATPases associated with a variety of cellular activities APQ97_RS07870 SM00937 APQ97_RS07870 APQ97_RS07895 SM00831 Cation transporter/ATPase, N-terminus APQ97_RS07910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APQ97_RS07985 SM00855 Phosphoglycerate mutase family APQ97_RS08000 SM00465 GIY-YIG type nucleases (URI domain) APQ97_RS08030 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08090 SM00422 helix_turn_helix, mercury resistance APQ97_RS08130 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08145 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08145 SM01086 C-terminal, D2-small domain, of ClpB protein APQ97_RS08180 SM00363 S4 RNA-binding domain APQ97_RS08200 SM00864 Tubulin/FtsZ family, GTPase domain APQ97_RS08200 SM00865 Tubulin/FtsZ family, C-terminal domain APQ97_RS08205 SM00842 Cell division protein FtsA APQ97_RS08235 SM00327 von Willebrand factor (vWF) type A domain APQ97_RS08245 SM01131 APQ97_RS08245 APQ97_RS08260 SM01091 Transporter associated domain APQ97_RS08265 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08325 SM00450 Rhodanese Homology Domain APQ97_RS08335 SM00421 helix_turn_helix, Lux Regulon APQ97_RS08335 SM00448 cheY-homologous receiver domain APQ97_RS08350 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08370 SM00226 Low molecular weight phosphatase family APQ97_RS08375 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. APQ97_RS08385 SM00014 Acid phosphatase homologues APQ97_RS08405 SM01234 APQ97_RS08405 APQ97_RS08410 SM00363 S4 RNA-binding domain APQ97_RS08475 SM00967 RNA 2'-O ribose methyltransferase substrate binding APQ97_RS08520 SM00487 DEAD-like helicases superfamily APQ97_RS08520 SM00490 helicase superfamily c-terminal domain APQ97_RS08565 SM00448 cheY-homologous receiver domain APQ97_RS08565 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS08570 SM01350 APQ97_RS08570 APQ97_RS08590 SM00487 DEAD-like helicases superfamily APQ97_RS08590 SM00490 helicase superfamily c-terminal domain APQ97_RS08635 SM01022 APQ97_RS08635 APQ97_RS08675 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08680 SM00387 Histidine kinase-like ATPases APQ97_RS08685 SM00448 cheY-homologous receiver domain APQ97_RS08685 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS08710 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08715 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS08755 SM00731 SprT homologues. APQ97_RS08760 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS08760 SM00732 Likely ribonuclease with RNase H fold. APQ97_RS08775 SM00327 von Willebrand factor (vWF) type A domain APQ97_RS08855 SM00382 ATPases associated with a variety of cellular activities APQ97_RS08885 SM00487 DEAD-like helicases superfamily APQ97_RS08885 SM00490 helicase superfamily c-terminal domain APQ97_RS08900 SM00855 Phosphoglycerate mutase family APQ97_RS08945 SM00411 bacterial (prokaryotic) histone like domain APQ97_RS08975 SM00363 S4 RNA-binding domain APQ97_RS09015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APQ97_RS09015 SM00387 Histidine kinase-like ATPases APQ97_RS09015 SM00388 His Kinase A (phosphoacceptor) domain APQ97_RS09020 SM00448 cheY-homologous receiver domain APQ97_RS09020 SM00862 Transcriptional regulatory protein, C terminal APQ97_RS09115 SM00858 APQ97_RS09115 APQ97_RS09205 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS09230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APQ97_RS09235 SM00479 APQ97_RS09235 APQ97_RS09235 SM00487 DEAD-like helicases superfamily APQ97_RS09235 SM00491 APQ97_RS09235 APQ97_RS09240 SM00849 Metallo-beta-lactamase superfamily APQ97_RS09265 SM00354 helix_turn _helix lactose operon repressor APQ97_RS09280 SM00845 GatB domain APQ97_RS09340 SM00870 APQ97_RS09340 APQ97_RS09350 SM00487 DEAD-like helicases superfamily APQ97_RS09350 SM00490 helicase superfamily c-terminal domain APQ97_RS09485 SM00829 Enoylreductase APQ97_RS09535 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS09555 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS09570 SM00271 DnaJ molecular chaperone homology domain APQ97_RS09590 SM00855 Phosphoglycerate mutase family APQ97_RS09605 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09610 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09640 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09655 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09680 SM00829 Enoylreductase APQ97_RS09770 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09790 SM00854 Bacterial capsule synthesis protein PGA_cap APQ97_RS09800 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APQ97_RS09830 SM00382 ATPases associated with a variety of cellular activities APQ97_RS09950 SM00463 Small MutS-related domain APQ97_RS09950 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APQ97_RS09950 SM00534 ATPase domain of DNA mismatch repair MUTS family APQ97_RS09965 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS09965 SM00866 APQ97_RS09965 APQ97_RS09975 SM00642 Alpha-amylase domain APQ97_RS09980 SM00257 Lysin motif APQ97_RS10025 SM00062 Bacterial periplasmic substrate-binding proteins APQ97_RS10030 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10045 SM00710 Parallel beta-helix repeats APQ97_RS10070 SM00478 endonuclease III APQ97_RS10110 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APQ97_RS10110 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal APQ97_RS10120 SM01208 APQ97_RS10120 APQ97_RS10140 SM00861 Transketolase, pyrimidine binding domain APQ97_RS10185 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10240 SM00342 helix_turn_helix, arabinose operon control protein APQ97_RS10265 SM00849 Metallo-beta-lactamase superfamily APQ97_RS10270 SM01230 APQ97_RS10270 APQ97_RS10275 SM00422 helix_turn_helix, mercury resistance APQ97_RS10290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APQ97_RS10300 SM00838 Elongation factor G C-terminus APQ97_RS10300 SM00889 Elongation factor G, domain IV APQ97_RS10320 SM00883 Chaperonin 10 Kd subunit APQ97_RS10415 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10430 SM00663 RNA polymerase I subunit A N-terminus APQ97_RS10445 SM00363 S4 RNA-binding domain APQ97_RS10475 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10480 SM00347 helix_turn_helix multiple antibiotic resistance protein APQ97_RS10580 SM00487 DEAD-like helicases superfamily APQ97_RS10580 SM00490 helicase superfamily c-terminal domain APQ97_RS10600 SM00220 Serine/Threonine protein kinases, catalytic domain APQ97_RS10600 SM00740 APQ97_RS10600 APQ97_RS10605 SM00331 Sigma factor PP2C-like phosphatases APQ97_RS10605 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APQ97_RS10620 SM00487 DEAD-like helicases superfamily APQ97_RS10620 SM00490 helicase superfamily c-terminal domain APQ97_RS10625 SM01409 APQ97_RS10625 APQ97_RS10630 SM00072 Guanylate kinase homologues. APQ97_RS10635 SM00322 K homology RNA-binding domain APQ97_RS10635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APQ97_RS10650 SM00981 APQ97_RS10650 APQ97_RS10685 SM00357 Cold shock protein domain APQ97_RS10695 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10705 SM00450 Rhodanese Homology Domain APQ97_RS10750 SM00345 helix_turn_helix gluconate operon transcriptional repressor APQ97_RS10750 SM00866 APQ97_RS10750 APQ97_RS10765 SM00382 ATPases associated with a variety of cellular activities APQ97_RS10765 SM01086 C-terminal, D2-small domain, of ClpB protein APQ97_RS10810 SM00287 Bacterial SH3 domain homologues APQ97_RS10885 SM00495 Chitin-binding domain type 3 APQ97_RS10985 SM00990 APQ97_RS10985 APQ97_RS10990 SM00885 D5 N terminal like APQ97_RS10995 SM00942 Primase C terminal 1 (PriCT-1) APQ97_RS10995 SM00943 Bifunctional DNA primase/polymerase, N-terminal APQ97_RS11005 SM00487 DEAD-like helicases superfamily APQ97_RS11005 SM00490 helicase superfamily c-terminal domain APQ97_RS11040 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11050 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11055 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11075 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11095 SM00316 Ribosomal protein S1-like RNA-binding domain APQ97_RS11105 SM00421 helix_turn_helix, Lux Regulon APQ97_RS11105 SM00448 cheY-homologous receiver domain APQ97_RS11110 SM00387 Histidine kinase-like ATPases APQ97_RS11130 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APQ97_RS11130 SM00534 ATPase domain of DNA mismatch repair MUTS family APQ97_RS11140 SM00836 DALR anticodon binding domain APQ97_RS11140 SM01016 Arginyl tRNA synthetase N terminal dom APQ97_RS11145 SM00287 Bacterial SH3 domain homologues APQ97_RS11185 SM00354 helix_turn _helix lactose operon repressor APQ97_RS11190 SM00642 Alpha-amylase domain APQ97_RS11240 SM00363 S4 RNA-binding domain APQ97_RS11240 SM01390 APQ97_RS11240 APQ97_RS11265 SM01228 APQ97_RS11265 APQ97_RS11300 SM00257 Lysin motif APQ97_RS11310 SM00382 ATPases associated with a variety of cellular activities APQ97_RS11315 SM00382 ATPases associated with a variety of cellular activities APQ97_RS11390 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11400 SM00530 Helix-turn-helix XRE-family like proteins APQ97_RS11430 SM00116 Domain in cystathionine beta-synthase and other proteins. APQ97_RS11430 SM01240 APQ97_RS11430 APQ97_RS11445 SM00382 ATPases associated with a variety of cellular activities APQ97_RS11480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2.