SSU_RS00005 SM00382 ATPases associated with a variety of cellular activities SSU_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SSU_RS00010 SM00480 DNA polymerase III beta subunit SSU_RS00025 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS00040 SM00487 DEAD-like helicases superfamily SSU_RS00040 SM00490 helicase superfamily c-terminal domain SSU_RS00040 SM00982 SSU_RS00040 SSU_RS00040 SM01058 CarD-like/TRCF domain SSU_RS00045 SM00363 S4 RNA-binding domain SSU_RS00065 SM00977 TilS substrate C-terminal domain SSU_RS00075 SM00382 ATPases associated with a variety of cellular activities SSU_RS00200 SM01400 SSU_RS00200 SSU_RS00230 SM01211 SSU_RS00230 SSU_RS00250 SM00798 AICARFT/IMPCHase bienzyme SSU_RS00250 SM00851 MGS-like domain SSU_RS00255 SM01209 SSU_RS00255 SSU_RS00255 SM01210 SSU_RS00255 SSU_RS00260 SM01001 AIR carboxylase SSU_RS00280 SM00998 Adenylosuccinate lyase C-terminus SSU_RS00300 SM00382 ATPases associated with a variety of cellular activities SSU_RS00310 SM00382 ATPases associated with a variety of cellular activities SSU_RS00315 SM00382 ATPases associated with a variety of cellular activities SSU_RS00330 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS00365 SM00853 MutL C terminal dimerisation domain SSU_RS00365 SM01340 SSU_RS00365 SSU_RS00370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SSU_RS00385 SM00852 Probable molybdopterin binding domain SSU_RS00390 SM00382 ATPases associated with a variety of cellular activities SSU_RS00405 SM00732 Likely ribonuclease with RNase H fold. SSU_RS00425 SM01403 SSU_RS00425 SSU_RS00445 SM01382 SSU_RS00445 SSU_RS00445 SM01383 SSU_RS00445 SSU_RS00460 SM00322 K homology RNA-binding domain SSU_RS00480 SM01374 SSU_RS00480 SSU_RS00485 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SSU_RS00550 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS00570 SM00662 RNA polymerases D SSU_RS00710 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS00715 SM00382 ATPases associated with a variety of cellular activities SSU_RS00750 SM00363 S4 RNA-binding domain SSU_RS00765 SM00663 RNA polymerase I subunit A N-terminus SSU_RS00780 SM00382 ATPases associated with a variety of cellular activities SSU_RS00875 SM00883 Chaperonin 10 Kd subunit SSU_RS00895 SM00838 Elongation factor G C-terminus SSU_RS00895 SM00889 Elongation factor G, domain IV SSU_RS00905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSU_RS00920 SM00422 helix_turn_helix, mercury resistance SSU_RS00925 SM01230 SSU_RS00925 SSU_RS00930 SM00849 Metallo-beta-lactamase superfamily SSU_RS00955 SM00342 helix_turn_helix, arabinose operon control protein SSU_RS01015 SM00382 ATPases associated with a variety of cellular activities SSU_RS01055 SM00861 Transketolase, pyrimidine binding domain SSU_RS01075 SM01208 SSU_RS01075 SSU_RS01080 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSU_RS01080 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSU_RS01120 SM00478 endonuclease III SSU_RS01145 SM00710 Parallel beta-helix repeats SSU_RS01160 SM00382 ATPases associated with a variety of cellular activities SSU_RS01165 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS01210 SM00257 Lysin motif SSU_RS01215 SM00642 Alpha-amylase domain SSU_RS01225 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS01225 SM00866 SSU_RS01225 SSU_RS01240 SM00463 Small MutS-related domain SSU_RS01240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SSU_RS01240 SM00534 ATPase domain of DNA mismatch repair MUTS family SSU_RS01265 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS01280 SM00382 ATPases associated with a variety of cellular activities SSU_RS01305 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSU_RS01315 SM00854 Bacterial capsule synthesis protein PGA_cap SSU_RS01335 SM00382 ATPases associated with a variety of cellular activities SSU_RS01430 SM00829 Enoylreductase SSU_RS01445 SM00382 ATPases associated with a variety of cellular activities SSU_RS01450 SM00382 ATPases associated with a variety of cellular activities SSU_RS01465 SM00382 ATPases associated with a variety of cellular activities SSU_RS01495 SM00382 ATPases associated with a variety of cellular activities SSU_RS01500 SM00382 ATPases associated with a variety of cellular activities SSU_RS01515 SM00855 Phosphoglycerate mutase family SSU_RS01535 SM00271 DnaJ molecular chaperone homology domain SSU_RS01550 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS01560 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS01615 SM00829 Enoylreductase SSU_RS01730 SM00487 DEAD-like helicases superfamily SSU_RS01730 SM00490 helicase superfamily c-terminal domain SSU_RS01735 SM00870 SSU_RS01735 SSU_RS01790 SM00845 GatB domain SSU_RS01795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSU_RS01800 SM00354 helix_turn _helix lactose operon repressor SSU_RS01840 SM01103 SSU_RS01840 SSU_RS01850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSU_RS01885 SM00422 helix_turn_helix, mercury resistance SSU_RS01905 SM00860 SMI1 / KNR4 family SSU_RS01915 SM00382 ATPases associated with a variety of cellular activities SSU_RS01915 SM01086 C-terminal, D2-small domain, of ClpB protein SSU_RS01930 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS01930 SM00866 SSU_RS01930 SSU_RS01975 SM00450 Rhodanese Homology Domain SSU_RS01985 SM00382 ATPases associated with a variety of cellular activities SSU_RS01995 SM00357 Cold shock protein domain SSU_RS02025 SM00981 SSU_RS02025 SSU_RS02040 SM00322 K homology RNA-binding domain SSU_RS02040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSU_RS02045 SM00072 Guanylate kinase homologues. SSU_RS02050 SM01409 SSU_RS02050 SSU_RS02055 SM00487 DEAD-like helicases superfamily SSU_RS02055 SM00490 helicase superfamily c-terminal domain SSU_RS02070 SM00331 Sigma factor PP2C-like phosphatases SSU_RS02070 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SSU_RS02075 SM00220 Serine/Threonine protein kinases, catalytic domain SSU_RS02075 SM00740 SSU_RS02075 SSU_RS02085 SM00387 Histidine kinase-like ATPases SSU_RS02090 SM00421 helix_turn_helix, Lux Regulon SSU_RS02090 SM00448 cheY-homologous receiver domain SSU_RS02100 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS02115 SM00487 DEAD-like helicases superfamily SSU_RS02115 SM00490 helicase superfamily c-terminal domain SSU_RS02215 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS02215 SM00866 SSU_RS02215 SSU_RS02220 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS02220 SM00866 SSU_RS02220 SSU_RS02290 SM00487 DEAD-like helicases superfamily SSU_RS02300 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS02315 SM00838 Elongation factor G C-terminus SSU_RS02370 SM00842 Cell division protein FtsA SSU_RS02375 SM00864 Tubulin/FtsZ family, GTPase domain SSU_RS02375 SM00865 Tubulin/FtsZ family, C-terminal domain SSU_RS02395 SM00363 S4 RNA-binding domain SSU_RS02425 SM00382 ATPases associated with a variety of cellular activities SSU_RS02425 SM01086 C-terminal, D2-small domain, of ClpB protein SSU_RS02440 SM00382 ATPases associated with a variety of cellular activities SSU_RS02475 SM00422 helix_turn_helix, mercury resistance SSU_RS02530 SM00382 ATPases associated with a variety of cellular activities SSU_RS02555 SM00855 Phosphoglycerate mutase family SSU_RS02625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSU_RS02655 SM00382 ATPases associated with a variety of cellular activities SSU_RS02660 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS02665 SM00481 DNA polymerase alpha chain like domain SSU_RS02710 SM00382 ATPases associated with a variety of cellular activities SSU_RS02715 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS02720 SM00849 Metallo-beta-lactamase superfamily SSU_RS02725 SM00479 SSU_RS02725 SSU_RS02725 SM00487 DEAD-like helicases superfamily SSU_RS02725 SM00491 SSU_RS02725 SSU_RS02730 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SSU_RS02755 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS02845 SM00858 SSU_RS02845 SSU_RS02975 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS03040 SM00100 Cyclic nucleotide-monophosphate binding domain SSU_RS03040 SM00419 helix_turn_helix, cAMP Regulatory protein SSU_RS03145 SM00363 S4 RNA-binding domain SSU_RS03170 SM00382 ATPases associated with a variety of cellular activities SSU_RS03180 SM00563 Phosphate acyltransferases SSU_RS03185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SSU_RS03190 SM00849 Metallo-beta-lactamase superfamily SSU_RS03200 SM00116 Domain in cystathionine beta-synthase and other proteins. SSU_RS03325 SM01321 SSU_RS03325 SSU_RS03365 SM00487 DEAD-like helicases superfamily SSU_RS03420 SM00420 helix_turn_helix, Deoxyribose operon repressor SSU_RS03420 SM01134 SSU_RS03420 SSU_RS03465 SM00859 Semialdehyde dehydrogenase, NAD binding domain SSU_RS03470 SM01130 SSU_RS03470 SSU_RS03550 SM00100 Cyclic nucleotide-monophosphate binding domain SSU_RS03570 SM00382 ATPases associated with a variety of cellular activities SSU_RS03575 SM00382 ATPases associated with a variety of cellular activities SSU_RS03610 SM00382 ATPases associated with a variety of cellular activities SSU_RS03615 SM00465 GIY-YIG type nucleases (URI domain) SSU_RS03650 SM01207 SSU_RS03650 SSU_RS03655 SM00387 Histidine kinase-like ATPases SSU_RS03655 SM00433 TopoisomeraseII SSU_RS03680 SM00434 DNA Topoisomerase IV SSU_RS03710 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS03740 SM00981 SSU_RS03740 SSU_RS03775 SM00363 S4 RNA-binding domain SSU_RS03800 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SSU_RS03805 SM00851 MGS-like domain SSU_RS03805 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSU_RS03805 SM01209 SSU_RS03805 SSU_RS03835 SM00382 ATPases associated with a variety of cellular activities SSU_RS03840 SM00382 ATPases associated with a variety of cellular activities SSU_RS03865 SM00382 ATPases associated with a variety of cellular activities SSU_RS03905 SM00478 endonuclease III SSU_RS03910 SM01240 SSU_RS03910 SSU_RS03935 SM00420 helix_turn_helix, Deoxyribose operon repressor SSU_RS03935 SM01134 SSU_RS03935 SSU_RS03970 SM00382 ATPases associated with a variety of cellular activities SSU_RS04010 SM00382 ATPases associated with a variety of cellular activities SSU_RS04010 SM00994 ClpX C4-type zinc finger SSU_RS04010 SM01086 C-terminal, D2-small domain, of ClpB protein SSU_RS04020 SM00562 SSU_RS04020 SSU_RS04025 SM00910 SSU_RS04025 SSU_RS04030 SM00838 Elongation factor G C-terminus SSU_RS04040 SM00894 Excalibur calcium-binding domain SSU_RS04055 SM00937 SSU_RS04055 SSU_RS04100 SM00910 SSU_RS04100 SSU_RS04115 SM00382 ATPases associated with a variety of cellular activities SSU_RS04190 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS04190 SM00866 SSU_RS04190 SSU_RS04200 SM00382 ATPases associated with a variety of cellular activities SSU_RS04200 SM00962 SRP54-type protein, GTPase domain SSU_RS04200 SM00963 SRP54-type protein, helical bundle domain SSU_RS04235 SM00387 Histidine kinase-like ATPases SSU_RS04240 SM00448 cheY-homologous receiver domain SSU_RS04240 SM00862 Transcriptional regulatory protein, C terminal SSU_RS04260 SM00382 ATPases associated with a variety of cellular activities SSU_RS04275 SM00382 ATPases associated with a variety of cellular activities SSU_RS04310 SM00342 helix_turn_helix, arabinose operon control protein SSU_RS04310 SM00871 Bacterial transcription activator, effector binding domain SSU_RS04335 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SSU_RS04335 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SSU_RS04335 SM00493 SSU_RS04335 SSU_RS04345 SM01266 SSU_RS04345 SSU_RS04355 SM00450 Rhodanese Homology Domain SSU_RS04360 SM00450 Rhodanese Homology Domain SSU_RS04410 SM00986 Uracil DNA glycosylase superfamily SSU_RS04410 SM00987 UreE urease accessory protein, C-terminal domain SSU_RS04430 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU_RS04465 SM00642 Alpha-amylase domain SSU_RS04470 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS04470 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SSU_RS04475 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS04475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SSU_RS04490 SM01208 SSU_RS04490 SSU_RS04505 SM00487 DEAD-like helicases superfamily SSU_RS04505 SM00490 helicase superfamily c-terminal domain SSU_RS04510 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS04510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SSU_RS04515 SM00382 ATPases associated with a variety of cellular activities SSU_RS04525 SM00382 ATPases associated with a variety of cellular activities SSU_RS04565 SM01061 CAT RNA binding domain SSU_RS04570 SM01133 SSU_RS04570 SSU_RS04600 SM00420 helix_turn_helix, Deoxyribose operon repressor SSU_RS04600 SM01134 SSU_RS04600 SSU_RS04630 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS04635 SM00478 endonuclease III SSU_RS04645 SM00382 ATPases associated with a variety of cellular activities SSU_RS04650 SM00382 ATPases associated with a variety of cellular activities SSU_RS04670 SM00954 Region found in RelA / SpoT proteins SSU_RS04675 SM01118 SSU_RS04675 SSU_RS04680 SM01400 SSU_RS04680 SSU_RS04700 SM00881 CoA binding domain SSU_RS04720 SM00434 DNA Topoisomerase IV SSU_RS04750 SM00382 ATPases associated with a variety of cellular activities SSU_RS04765 SM01133 SSU_RS04765 SSU_RS04770 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SSU_RS04790 SM01321 SSU_RS04790 SSU_RS04800 SM00460 Transglutaminase/protease-like homologues SSU_RS04810 SM00387 Histidine kinase-like ATPases SSU_RS04810 SM00388 His Kinase A (phosphoacceptor) domain SSU_RS04815 SM00448 cheY-homologous receiver domain SSU_RS04815 SM00862 Transcriptional regulatory protein, C terminal SSU_RS04835 SM00382 ATPases associated with a variety of cellular activities SSU_RS04840 SM00382 ATPases associated with a variety of cellular activities SSU_RS04885 SM00904 Riboflavin kinase SSU_RS04995 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS05025 SM00905 Dihydroneopterin aldolase SSU_RS05065 SM00873 B3/4 domain SSU_RS05065 SM00874 tRNA synthetase B5 domain SSU_RS05065 SM00896 Ferredoxin-fold anticodon binding domain SSU_RS05115 SM00345 helix_turn_helix gluconate operon transcriptional repressor SSU_RS05115 SM00895 SSU_RS05115 SSU_RS05135 SM00892 DNA/RNA non-specific endonuclease SSU_RS05160 SM00382 ATPases associated with a variety of cellular activities SSU_RS05195 SM00046 Diacylglycerol kinase catalytic domain (presumed) SSU_RS05200 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SSU_RS05200 SM00292 breast cancer carboxy-terminal domain SSU_RS05200 SM00532 Ligase N family SSU_RS05230 SM00382 ATPases associated with a variety of cellular activities SSU_RS05230 SM00962 SRP54-type protein, GTPase domain SSU_RS05230 SM00963 SRP54-type protein, helical bundle domain SSU_RS05245 SM00968 SMC proteins Flexible Hinge Domain SSU_RS05250 SM00358 Double-stranded RNA binding motif SSU_RS05250 SM00535 Ribonuclease III family SSU_RS05260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSU_RS05290 SM01329 SSU_RS05290 SSU_RS05325 SM00354 helix_turn _helix lactose operon repressor SSU_RS05355 SM01323 SSU_RS05355 SSU_RS05435 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS05460 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SSU_RS05530 SM00382 ATPases associated with a variety of cellular activities SSU_RS05555 SM01133 SSU_RS05555 SSU_RS05685 SM00382 ATPases associated with a variety of cellular activities SSU_RS05710 SM00047 Lysozyme subfamily 2 SSU_RS05715 SM00646 SSU_RS05715 SSU_RS05795 SM00155 Phospholipase D. Active site motifs. SSU_RS05800 SM00631 SSU_RS05800 SSU_RS05900 SM00649 Ribosomal protein L11/L12 SSU_RS05915 SM00382 ATPases associated with a variety of cellular activities SSU_RS05915 SM00843 SSU_RS05915 SSU_RS05920 SM00640 Glycosyl hydrolases family 32 SSU_RS05940 SM00354 helix_turn _helix lactose operon repressor SSU_RS06000 SM00493 SSU_RS06000 SSU_RS06010 SM00382 ATPases associated with a variety of cellular activities SSU_RS06020 SM00849 Metallo-beta-lactamase superfamily SSU_RS06025 SM00091 PAS domain SSU_RS06025 SM00387 Histidine kinase-like ATPases SSU_RS06025 SM00388 His Kinase A (phosphoacceptor) domain SSU_RS06030 SM00448 cheY-homologous receiver domain SSU_RS06030 SM00862 Transcriptional regulatory protein, C terminal SSU_RS06035 SM00382 ATPases associated with a variety of cellular activities SSU_RS06040 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS06055 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SSU_RS06085 SM00354 helix_turn _helix lactose operon repressor SSU_RS06105 SM00881 CoA binding domain SSU_RS06115 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SSU_RS06115 SM00474 3'-5' exonuclease SSU_RS06115 SM00475 5'-3' exonuclease SSU_RS06115 SM00482 DNA polymerase A domain SSU_RS06130 SM00382 ATPases associated with a variety of cellular activities SSU_RS06160 SM00829 Enoylreductase SSU_RS06170 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS06170 SM00955 SSU_RS06170 SSU_RS06195 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SSU_RS06195 SM01232 SSU_RS06195 SSU_RS06240 SM00382 ATPases associated with a variety of cellular activities SSU_RS06245 SM00382 ATPases associated with a variety of cellular activities SSU_RS06260 SM00899 SSU_RS06260 SSU_RS06275 SM00382 ATPases associated with a variety of cellular activities SSU_RS06280 SM00937 SSU_RS06280 SSU_RS06305 SM00831 Cation transporter/ATPase, N-terminus SSU_RS06350 SM00400 zinc finger SSU_RS06350 SM00493 SSU_RS06350 SSU_RS06390 SM00729 Elongator protein 3, MiaB family, Radical SAM SSU_RS06440 SM00487 DEAD-like helicases superfamily SSU_RS06460 SM00244 prohibitin homologues SSU_RS06475 SM00986 Uracil DNA glycosylase superfamily SSU_RS06475 SM00987 UreE urease accessory protein, C-terminal domain SSU_RS06515 SM00382 ATPases associated with a variety of cellular activities SSU_RS06550 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS06560 SM00382 ATPases associated with a variety of cellular activities SSU_RS06570 SM00235 Zinc-dependent metalloprotease SSU_RS06580 SM00849 Metallo-beta-lactamase superfamily SSU_RS06595 SM00382 ATPases associated with a variety of cellular activities SSU_RS06620 SM01061 CAT RNA binding domain SSU_RS06635 SM00028 Tetratricopeptide repeats SSU_RS06670 SM01192 SSU_RS06670 SSU_RS06670 SM01193 SSU_RS06670 SSU_RS06705 SM00387 Histidine kinase-like ATPases SSU_RS06705 SM00433 TopoisomeraseII SSU_RS06730 SM00885 D5 N terminal like SSU_RS06795 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS06835 SM00830 Chorismate mutase type II SSU_RS06875 SM00382 ATPases associated with a variety of cellular activities SSU_RS06880 SM00382 ATPases associated with a variety of cellular activities SSU_RS06915 SM00642 Alpha-amylase domain SSU_RS06920 SM00642 Alpha-amylase domain SSU_RS06945 SM00342 helix_turn_helix, arabinose operon control protein SSU_RS07005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SSU_RS07010 SM00487 DEAD-like helicases superfamily SSU_RS07010 SM00490 helicase superfamily c-terminal domain SSU_RS07025 SM00365 Leucine-rich repeat, SDS22-like subfamily SSU_RS07065 SM01022 SSU_RS07065 SSU_RS07100 SM01321 SSU_RS07100 SSU_RS07110 SM00382 ATPases associated with a variety of cellular activities SSU_RS07115 SM00387 Histidine kinase-like ATPases SSU_RS07120 SM00448 cheY-homologous receiver domain SSU_RS07120 SM00862 Transcriptional regulatory protein, C terminal SSU_RS07145 SM00382 ATPases associated with a variety of cellular activities SSU_RS07150 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS07200 SM00731 SprT homologues. SSU_RS07280 SM00382 ATPases associated with a variety of cellular activities SSU_RS07310 SM00487 DEAD-like helicases superfamily SSU_RS07310 SM00490 helicase superfamily c-terminal domain SSU_RS07325 SM01321 SSU_RS07325 SSU_RS07330 SM00855 Phosphoglycerate mutase family SSU_RS07370 SM00411 bacterial (prokaryotic) histone like domain SSU_RS07400 SM00363 S4 RNA-binding domain SSU_RS07430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SSU_RS07430 SM00387 Histidine kinase-like ATPases SSU_RS07430 SM00388 His Kinase A (phosphoacceptor) domain SSU_RS07435 SM00448 cheY-homologous receiver domain SSU_RS07435 SM00862 Transcriptional regulatory protein, C terminal SSU_RS07445 SM00327 von Willebrand factor (vWF) type A domain SSU_RS07460 SM01131 SSU_RS07460 SSU_RS07475 SM01091 Transporter associated domain SSU_RS07480 SM00382 ATPases associated with a variety of cellular activities SSU_RS07540 SM00450 Rhodanese Homology Domain SSU_RS07550 SM00421 helix_turn_helix, Lux Regulon SSU_RS07550 SM00448 cheY-homologous receiver domain SSU_RS07565 SM00382 ATPases associated with a variety of cellular activities SSU_RS07580 SM00226 Low molecular weight phosphatase family SSU_RS07585 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SSU_RS07595 SM00014 Acid phosphatase homologues SSU_RS07615 SM01234 SSU_RS07615 SSU_RS07620 SM00363 S4 RNA-binding domain SSU_RS07685 SM00967 RNA 2'-O ribose methyltransferase substrate binding SSU_RS07725 SM00487 DEAD-like helicases superfamily SSU_RS07725 SM00490 helicase superfamily c-terminal domain SSU_RS07770 SM00448 cheY-homologous receiver domain SSU_RS07770 SM00862 Transcriptional regulatory protein, C terminal SSU_RS07775 SM01350 SSU_RS07775 SSU_RS07795 SM00487 DEAD-like helicases superfamily SSU_RS07795 SM00490 helicase superfamily c-terminal domain SSU_RS07810 SM00740 SSU_RS07810 SSU_RS07825 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS07870 SM00900 SSU_RS07870 SSU_RS07935 SM00873 B3/4 domain SSU_RS07945 SM00382 ATPases associated with a variety of cellular activities SSU_RS07945 SM00930 SSU_RS07945 SSU_RS08020 SM00487 DEAD-like helicases superfamily SSU_RS08065 SM00878 Biotin carboxylase C-terminal domain SSU_RS08080 SM00825 Beta-ketoacyl synthase SSU_RS08085 SM00822 SSU_RS08085 SSU_RS08090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SSU_RS08110 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS08135 SM01005 Alanine racemase, C-terminal domain SSU_RS08145 SM00957 SecA DEAD-like domain SSU_RS08145 SM00958 SecA preprotein cross-linking domain SSU_RS08165 SM00640 Glycosyl hydrolases family 32 SSU_RS08170 SM00354 helix_turn _helix lactose operon repressor SSU_RS08185 SM00841 Elongation factor P, C-terminal SSU_RS08185 SM01185 SSU_RS08185 SSU_RS08195 SM00382 ATPases associated with a variety of cellular activities SSU_RS08255 SM00861 Transketolase, pyrimidine binding domain SSU_RS08300 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS08300 SM00322 K homology RNA-binding domain SSU_RS08325 SM00382 ATPases associated with a variety of cellular activities SSU_RS08355 SM01120 SSU_RS08355 SSU_RS08355 SM01121 SSU_RS08355 SSU_RS08380 SM00382 ATPases associated with a variety of cellular activities SSU_RS08385 SM00382 ATPases associated with a variety of cellular activities SSU_RS08395 SM00936 Penicillin-binding protein 5, C-terminal domain SSU_RS08420 SM00382 ATPases associated with a variety of cellular activities SSU_RS08440 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS08445 SM00382 ATPases associated with a variety of cellular activities SSU_RS08455 SM00244 prohibitin homologues SSU_RS08540 SM00967 RNA 2'-O ribose methyltransferase substrate binding SSU_RS08545 SM00740 SSU_RS08545 SSU_RS08565 SM00382 ATPases associated with a variety of cellular activities SSU_RS08575 SM00342 helix_turn_helix, arabinose operon control protein SSU_RS08575 SM00448 cheY-homologous receiver domain SSU_RS08620 SM00872 Alpha mannosidase, middle domain SSU_RS08625 SM01149 SSU_RS08625 SSU_RS08635 SM01208 SSU_RS08635 SSU_RS08645 SM00840 SSU_RS08645 SSU_RS08665 SM00316 Ribosomal protein S1-like RNA-binding domain SSU_RS08665 SM00322 K homology RNA-binding domain SSU_RS08700 SM01387 SSU_RS08700 SSU_RS08720 SM00363 S4 RNA-binding domain SSU_RS08760 SM01329 SSU_RS08760 SSU_RS08765 SM00917 LeuA allosteric (dimerisation) domain SSU_RS08790 SM00479 SSU_RS08790 SSU_RS08790 SM00481 DNA polymerase alpha chain like domain SSU_RS08810 SM01120 SSU_RS08810 SSU_RS08845 SM01323 SSU_RS08845 SSU_RS08850 SM00788 Adenylosuccinate synthetase SSU_RS08890 SM00382 ATPases associated with a variety of cellular activities SSU_RS08890 SM01086 C-terminal, D2-small domain, of ClpB protein SSU_RS08935 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SSU_RS08935 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SSU_RS08985 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SSU_RS09005 SM00382 ATPases associated with a variety of cellular activities SSU_RS09015 SM00530 Helix-turn-helix XRE-family like proteins SSU_RS09035 SM00650 Ribosomal RNA adenine dimethylases SSU_RS09075 SM00493 SSU_RS09075 SSU_RS09090 SM00393 Putative single-stranded nucleic acids-binding domain SSU_RS09090 SM01245 SSU_RS09090 SSU_RS09160 SM00850 LytTr DNA-binding domain SSU_RS09170 SM00947 Carbonic anhydrase SSU_RS09175 SM00382 ATPases associated with a variety of cellular activities SSU_RS09180 SM00855 Phosphoglycerate mutase family SSU_RS09190 SM00382 ATPases associated with a variety of cellular activities SSU_RS09195 SM00382 ATPases associated with a variety of cellular activities SSU_RS09200 SM00347 helix_turn_helix multiple antibiotic resistance protein SSU_RS09265 SM00861 Transketolase, pyrimidine binding domain SSU_RS09285 SM01007 Class II Aldolase and Adducin N-terminal domain SSU_RS09295 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU_RS09315 SM00642 Alpha-amylase domain SSU_RS09320 SM00354 helix_turn _helix lactose operon repressor SSU_RS09325 SM00382 ATPases associated with a variety of cellular activities SSU_RS09335 SM00062 Bacterial periplasmic substrate-binding proteins SSU_RS09405 SM00382 ATPases associated with a variety of cellular activities SSU_RS09420 SM00529 Helix-turn-helix diphteria tox regulatory element SSU_RS09420 SM00899 SSU_RS09420 SSU_RS09455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SSU_RS09455 SM00954 Region found in RelA / SpoT proteins SSU_RS09525 SM01022 SSU_RS09525 SSU_RS09540 SM00382 ATPases associated with a variety of cellular activities SSU_RS09595 SM00850 LytTr DNA-binding domain SSU_RS09600 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SSU_RS09600 SM00534 ATPase domain of DNA mismatch repair MUTS family SSU_RS09610 SM00836 DALR anticodon binding domain SSU_RS09610 SM01016 Arginyl tRNA synthetase N terminal dom SSU_RS09615 SM00287 Bacterial SH3 domain homologues SSU_RS09655 SM00354 helix_turn _helix lactose operon repressor SSU_RS09660 SM00642 Alpha-amylase domain SSU_RS09695 SM01217 SSU_RS09695 SSU_RS09705 SM01217 SSU_RS09705 SSU_RS09710 SM00448 cheY-homologous receiver domain SSU_RS09710 SM00850 LytTr DNA-binding domain SSU_RS09735 SM00363 S4 RNA-binding domain SSU_RS09735 SM01390 SSU_RS09735 SSU_RS09765 SM01228 SSU_RS09765 SSU_RS09810 SM00257 Lysin motif SSU_RS09820 SM00382 ATPases associated with a variety of cellular activities SSU_RS09825 SM00382 ATPases associated with a variety of cellular activities SSU_RS09860 SM00116 Domain in cystathionine beta-synthase and other proteins. SSU_RS09860 SM01240 SSU_RS09860 SSU_RS09875 SM00382 ATPases associated with a variety of cellular activities SSU_RS09910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SSU_RS09915 SM00470 ParB-like nuclease domain