YYK_RS00005 SM00382 ATPases associated with a variety of cellular activities YYK_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain YYK_RS00010 SM00480 DNA polymerase III beta subunit YYK_RS00025 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS00040 SM00487 DEAD-like helicases superfamily YYK_RS00040 SM00490 helicase superfamily c-terminal domain YYK_RS00040 SM00982 YYK_RS00040 YYK_RS00040 SM01058 CarD-like/TRCF domain YYK_RS00045 SM00363 S4 RNA-binding domain YYK_RS00065 SM00977 TilS substrate C-terminal domain YYK_RS00075 SM00382 ATPases associated with a variety of cellular activities YYK_RS00200 SM01400 YYK_RS00200 YYK_RS00230 SM01211 YYK_RS00230 YYK_RS00250 SM00798 AICARFT/IMPCHase bienzyme YYK_RS00250 SM00851 MGS-like domain YYK_RS00255 SM01209 YYK_RS00255 YYK_RS00255 SM01210 YYK_RS00255 YYK_RS00260 SM01001 AIR carboxylase YYK_RS00280 SM00998 Adenylosuccinate lyase C-terminus YYK_RS00300 SM00382 ATPases associated with a variety of cellular activities YYK_RS00310 SM00382 ATPases associated with a variety of cellular activities YYK_RS00315 SM00382 ATPases associated with a variety of cellular activities YYK_RS00330 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS00365 SM00853 MutL C terminal dimerisation domain YYK_RS00365 SM01340 YYK_RS00365 YYK_RS00370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YYK_RS00385 SM00852 Probable molybdopterin binding domain YYK_RS00390 SM00382 ATPases associated with a variety of cellular activities YYK_RS00405 SM00732 Likely ribonuclease with RNase H fold. YYK_RS00425 SM01403 YYK_RS00425 YYK_RS00445 SM01382 YYK_RS00445 YYK_RS00445 SM01383 YYK_RS00445 YYK_RS00460 SM00322 K homology RNA-binding domain YYK_RS00480 SM01374 YYK_RS00480 YYK_RS00485 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YYK_RS00550 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS00570 SM00662 RNA polymerases D YYK_RS00670 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS00675 SM00382 ATPases associated with a variety of cellular activities YYK_RS00710 SM00363 S4 RNA-binding domain YYK_RS00725 SM00663 RNA polymerase I subunit A N-terminus YYK_RS00740 SM00382 ATPases associated with a variety of cellular activities YYK_RS00835 SM00883 Chaperonin 10 Kd subunit YYK_RS00855 SM00838 Elongation factor G C-terminus YYK_RS00855 SM00889 Elongation factor G, domain IV YYK_RS00865 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YYK_RS00880 SM00422 helix_turn_helix, mercury resistance YYK_RS00885 SM01230 YYK_RS00885 YYK_RS00890 SM00849 Metallo-beta-lactamase superfamily YYK_RS00915 SM00342 helix_turn_helix, arabinose operon control protein YYK_RS00975 SM00382 ATPases associated with a variety of cellular activities YYK_RS01015 SM00861 Transketolase, pyrimidine binding domain YYK_RS01035 SM01208 YYK_RS01035 YYK_RS01040 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YYK_RS01040 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal YYK_RS01080 SM00478 endonuclease III YYK_RS01105 SM00710 Parallel beta-helix repeats YYK_RS01120 SM00382 ATPases associated with a variety of cellular activities YYK_RS01125 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS01170 SM00257 Lysin motif YYK_RS01175 SM00642 Alpha-amylase domain YYK_RS01195 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS01195 SM00866 YYK_RS01195 YYK_RS01210 SM00463 Small MutS-related domain YYK_RS01210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YYK_RS01210 SM00534 ATPase domain of DNA mismatch repair MUTS family YYK_RS01235 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS01250 SM00382 ATPases associated with a variety of cellular activities YYK_RS01275 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YYK_RS01285 SM00854 Bacterial capsule synthesis protein PGA_cap YYK_RS01305 SM00382 ATPases associated with a variety of cellular activities YYK_RS01400 SM00829 Enoylreductase YYK_RS01415 SM00382 ATPases associated with a variety of cellular activities YYK_RS01420 SM00382 ATPases associated with a variety of cellular activities YYK_RS01435 SM00382 ATPases associated with a variety of cellular activities YYK_RS01465 SM00382 ATPases associated with a variety of cellular activities YYK_RS01470 SM00382 ATPases associated with a variety of cellular activities YYK_RS01485 SM00855 Phosphoglycerate mutase family YYK_RS01505 SM00271 DnaJ molecular chaperone homology domain YYK_RS01520 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS01530 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS01585 SM00829 Enoylreductase YYK_RS01700 SM00487 DEAD-like helicases superfamily YYK_RS01700 SM00490 helicase superfamily c-terminal domain YYK_RS01705 SM00870 YYK_RS01705 YYK_RS01760 SM00845 GatB domain YYK_RS01765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YYK_RS01770 SM00354 helix_turn _helix lactose operon repressor YYK_RS01810 SM01103 YYK_RS01810 YYK_RS01820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YYK_RS01855 SM00422 helix_turn_helix, mercury resistance YYK_RS01875 SM00860 SMI1 / KNR4 family YYK_RS01885 SM00382 ATPases associated with a variety of cellular activities YYK_RS01885 SM01086 C-terminal, D2-small domain, of ClpB protein YYK_RS01900 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS01900 SM00866 YYK_RS01900 YYK_RS01950 SM00450 Rhodanese Homology Domain YYK_RS01960 SM00382 ATPases associated with a variety of cellular activities YYK_RS01970 SM00357 Cold shock protein domain YYK_RS02000 SM00981 YYK_RS02000 YYK_RS02015 SM00322 K homology RNA-binding domain YYK_RS02015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YYK_RS02020 SM00072 Guanylate kinase homologues. YYK_RS02025 SM01409 YYK_RS02025 YYK_RS02030 SM00487 DEAD-like helicases superfamily YYK_RS02030 SM00490 helicase superfamily c-terminal domain YYK_RS02045 SM00331 Sigma factor PP2C-like phosphatases YYK_RS02045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain YYK_RS02050 SM00220 Serine/Threonine protein kinases, catalytic domain YYK_RS02050 SM00740 YYK_RS02050 YYK_RS02060 SM00387 Histidine kinase-like ATPases YYK_RS02065 SM00421 helix_turn_helix, Lux Regulon YYK_RS02065 SM00448 cheY-homologous receiver domain YYK_RS02075 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS02090 SM00487 DEAD-like helicases superfamily YYK_RS02090 SM00490 helicase superfamily c-terminal domain YYK_RS02190 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS02190 SM00866 YYK_RS02190 YYK_RS02195 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS02195 SM00866 YYK_RS02195 YYK_RS02265 SM00487 DEAD-like helicases superfamily YYK_RS02275 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS02290 SM00838 Elongation factor G C-terminus YYK_RS02345 SM00842 Cell division protein FtsA YYK_RS02350 SM00864 Tubulin/FtsZ family, GTPase domain YYK_RS02350 SM00865 Tubulin/FtsZ family, C-terminal domain YYK_RS02370 SM00363 S4 RNA-binding domain YYK_RS02405 SM00382 ATPases associated with a variety of cellular activities YYK_RS02440 SM00422 helix_turn_helix, mercury resistance YYK_RS02495 SM00382 ATPases associated with a variety of cellular activities YYK_RS02520 SM00855 Phosphoglycerate mutase family YYK_RS02590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YYK_RS02620 SM00382 ATPases associated with a variety of cellular activities YYK_RS02625 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS02630 SM00481 DNA polymerase alpha chain like domain YYK_RS02675 SM00382 ATPases associated with a variety of cellular activities YYK_RS02680 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS02685 SM00849 Metallo-beta-lactamase superfamily YYK_RS02690 SM00479 YYK_RS02690 YYK_RS02690 SM00487 DEAD-like helicases superfamily YYK_RS02690 SM00491 YYK_RS02690 YYK_RS02695 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YYK_RS02720 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS02805 SM00858 YYK_RS02805 YYK_RS02935 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS03000 SM00100 Cyclic nucleotide-monophosphate binding domain YYK_RS03000 SM00419 helix_turn_helix, cAMP Regulatory protein YYK_RS03110 SM00363 S4 RNA-binding domain YYK_RS03135 SM00382 ATPases associated with a variety of cellular activities YYK_RS03145 SM00563 Phosphate acyltransferases YYK_RS03150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YYK_RS03155 SM00849 Metallo-beta-lactamase superfamily YYK_RS03165 SM00116 Domain in cystathionine beta-synthase and other proteins. YYK_RS03290 SM01321 YYK_RS03290 YYK_RS03330 SM00487 DEAD-like helicases superfamily YYK_RS03385 SM00420 helix_turn_helix, Deoxyribose operon repressor YYK_RS03385 SM01134 YYK_RS03385 YYK_RS03430 SM00859 Semialdehyde dehydrogenase, NAD binding domain YYK_RS03435 SM01130 YYK_RS03435 YYK_RS03515 SM00100 Cyclic nucleotide-monophosphate binding domain YYK_RS03535 SM00382 ATPases associated with a variety of cellular activities YYK_RS03540 SM00382 ATPases associated with a variety of cellular activities YYK_RS03575 SM00382 ATPases associated with a variety of cellular activities YYK_RS03580 SM00465 GIY-YIG type nucleases (URI domain) YYK_RS03615 SM01207 YYK_RS03615 YYK_RS03620 SM00387 Histidine kinase-like ATPases YYK_RS03620 SM00433 TopoisomeraseII YYK_RS03645 SM00434 DNA Topoisomerase IV YYK_RS03675 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS03705 SM00981 YYK_RS03705 YYK_RS03740 SM00363 S4 RNA-binding domain YYK_RS03765 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YYK_RS03770 SM00851 MGS-like domain YYK_RS03770 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YYK_RS03770 SM01209 YYK_RS03770 YYK_RS03800 SM00382 ATPases associated with a variety of cellular activities YYK_RS03805 SM00382 ATPases associated with a variety of cellular activities YYK_RS03830 SM00382 ATPases associated with a variety of cellular activities YYK_RS03870 SM00478 endonuclease III YYK_RS03875 SM01240 YYK_RS03875 YYK_RS03900 SM00420 helix_turn_helix, Deoxyribose operon repressor YYK_RS03900 SM01134 YYK_RS03900 YYK_RS03935 SM00382 ATPases associated with a variety of cellular activities YYK_RS03975 SM00382 ATPases associated with a variety of cellular activities YYK_RS03975 SM00994 ClpX C4-type zinc finger YYK_RS03975 SM01086 C-terminal, D2-small domain, of ClpB protein YYK_RS03985 SM00562 YYK_RS03985 YYK_RS03990 SM00910 YYK_RS03990 YYK_RS03995 SM00838 Elongation factor G C-terminus YYK_RS04005 SM00894 Excalibur calcium-binding domain YYK_RS04020 SM00937 YYK_RS04020 YYK_RS04065 SM00910 YYK_RS04065 YYK_RS04080 SM00382 ATPases associated with a variety of cellular activities YYK_RS04095 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS04095 SM00866 YYK_RS04095 YYK_RS04105 SM00382 ATPases associated with a variety of cellular activities YYK_RS04105 SM00962 SRP54-type protein, GTPase domain YYK_RS04105 SM00963 SRP54-type protein, helical bundle domain YYK_RS04145 SM00387 Histidine kinase-like ATPases YYK_RS04150 SM00448 cheY-homologous receiver domain YYK_RS04150 SM00862 Transcriptional regulatory protein, C terminal YYK_RS04170 SM00382 ATPases associated with a variety of cellular activities YYK_RS04185 SM00382 ATPases associated with a variety of cellular activities YYK_RS04220 SM00342 helix_turn_helix, arabinose operon control protein YYK_RS04220 SM00871 Bacterial transcription activator, effector binding domain YYK_RS04245 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YYK_RS04245 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YYK_RS04245 SM00493 YYK_RS04245 YYK_RS04255 SM01266 YYK_RS04255 YYK_RS04265 SM00450 Rhodanese Homology Domain YYK_RS04270 SM00450 Rhodanese Homology Domain YYK_RS04320 SM00986 Uracil DNA glycosylase superfamily YYK_RS04320 SM00987 UreE urease accessory protein, C-terminal domain YYK_RS04340 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YYK_RS04375 SM00642 Alpha-amylase domain YYK_RS04380 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS04380 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YYK_RS04385 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS04385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YYK_RS04400 SM01208 YYK_RS04400 YYK_RS04415 SM00487 DEAD-like helicases superfamily YYK_RS04415 SM00490 helicase superfamily c-terminal domain YYK_RS04420 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS04420 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YYK_RS04425 SM00382 ATPases associated with a variety of cellular activities YYK_RS04435 SM00382 ATPases associated with a variety of cellular activities YYK_RS04475 SM01061 CAT RNA binding domain YYK_RS04480 SM01133 YYK_RS04480 YYK_RS04510 SM00420 helix_turn_helix, Deoxyribose operon repressor YYK_RS04510 SM01134 YYK_RS04510 YYK_RS04540 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS04545 SM00478 endonuclease III YYK_RS04555 SM00382 ATPases associated with a variety of cellular activities YYK_RS04560 SM00382 ATPases associated with a variety of cellular activities YYK_RS04580 SM00954 Region found in RelA / SpoT proteins YYK_RS04585 SM01118 YYK_RS04585 YYK_RS04590 SM01400 YYK_RS04590 YYK_RS04610 SM00881 CoA binding domain YYK_RS04630 SM00434 DNA Topoisomerase IV YYK_RS04655 SM00382 ATPases associated with a variety of cellular activities YYK_RS04670 SM01133 YYK_RS04670 YYK_RS04675 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain YYK_RS04695 SM00460 Transglutaminase/protease-like homologues YYK_RS04705 SM00387 Histidine kinase-like ATPases YYK_RS04705 SM00388 His Kinase A (phosphoacceptor) domain YYK_RS04710 SM00448 cheY-homologous receiver domain YYK_RS04710 SM00862 Transcriptional regulatory protein, C terminal YYK_RS04730 SM00382 ATPases associated with a variety of cellular activities YYK_RS04735 SM00382 ATPases associated with a variety of cellular activities YYK_RS04780 SM00904 Riboflavin kinase YYK_RS04890 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS04920 SM00905 Dihydroneopterin aldolase YYK_RS04960 SM00873 B3/4 domain YYK_RS04960 SM00874 tRNA synthetase B5 domain YYK_RS04960 SM00896 Ferredoxin-fold anticodon binding domain YYK_RS05010 SM00345 helix_turn_helix gluconate operon transcriptional repressor YYK_RS05010 SM00895 YYK_RS05010 YYK_RS05030 SM00892 DNA/RNA non-specific endonuclease YYK_RS05055 SM00382 ATPases associated with a variety of cellular activities YYK_RS05090 SM00046 Diacylglycerol kinase catalytic domain (presumed) YYK_RS05095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YYK_RS05095 SM00292 breast cancer carboxy-terminal domain YYK_RS05095 SM00532 Ligase N family YYK_RS05125 SM00382 ATPases associated with a variety of cellular activities YYK_RS05125 SM00962 SRP54-type protein, GTPase domain YYK_RS05125 SM00963 SRP54-type protein, helical bundle domain YYK_RS05140 SM00968 SMC proteins Flexible Hinge Domain YYK_RS05145 SM00358 Double-stranded RNA binding motif YYK_RS05145 SM00535 Ribonuclease III family YYK_RS05155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YYK_RS05185 SM01329 YYK_RS05185 YYK_RS05220 SM00354 helix_turn _helix lactose operon repressor YYK_RS05240 SM01323 YYK_RS05240 YYK_RS05320 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS05345 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YYK_RS05415 SM00382 ATPases associated with a variety of cellular activities YYK_RS05440 SM01133 YYK_RS05440 YYK_RS05570 SM00382 ATPases associated with a variety of cellular activities YYK_RS05595 SM00047 Lysozyme subfamily 2 YYK_RS05600 SM00646 YYK_RS05600 YYK_RS05680 SM00155 Phospholipase D. Active site motifs. YYK_RS05685 SM00631 YYK_RS05685 YYK_RS05785 SM00649 Ribosomal protein L11/L12 YYK_RS05800 SM00382 ATPases associated with a variety of cellular activities YYK_RS05800 SM00843 YYK_RS05800 YYK_RS05805 SM00640 Glycosyl hydrolases family 32 YYK_RS05825 SM00354 helix_turn _helix lactose operon repressor YYK_RS05885 SM00493 YYK_RS05885 YYK_RS05895 SM00382 ATPases associated with a variety of cellular activities YYK_RS05910 SM00849 Metallo-beta-lactamase superfamily YYK_RS05915 SM00091 PAS domain YYK_RS05915 SM00387 Histidine kinase-like ATPases YYK_RS05915 SM00388 His Kinase A (phosphoacceptor) domain YYK_RS05920 SM00448 cheY-homologous receiver domain YYK_RS05920 SM00862 Transcriptional regulatory protein, C terminal YYK_RS05925 SM00382 ATPases associated with a variety of cellular activities YYK_RS05930 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS05945 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YYK_RS05975 SM00354 helix_turn _helix lactose operon repressor YYK_RS05995 SM00881 CoA binding domain YYK_RS06005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YYK_RS06005 SM00474 3'-5' exonuclease YYK_RS06005 SM00475 5'-3' exonuclease YYK_RS06005 SM00482 DNA polymerase A domain YYK_RS06020 SM00382 ATPases associated with a variety of cellular activities YYK_RS06050 SM00829 Enoylreductase YYK_RS06060 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS06060 SM00955 YYK_RS06060 YYK_RS06085 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YYK_RS06085 SM01232 YYK_RS06085 YYK_RS06130 SM00382 ATPases associated with a variety of cellular activities YYK_RS06135 SM00382 ATPases associated with a variety of cellular activities YYK_RS06150 SM00899 YYK_RS06150 YYK_RS06165 SM00382 ATPases associated with a variety of cellular activities YYK_RS06170 SM00937 YYK_RS06170 YYK_RS06195 SM00831 Cation transporter/ATPase, N-terminus YYK_RS06240 SM00400 zinc finger YYK_RS06240 SM00493 YYK_RS06240 YYK_RS06280 SM00729 Elongator protein 3, MiaB family, Radical SAM YYK_RS06330 SM00487 DEAD-like helicases superfamily YYK_RS06350 SM00244 prohibitin homologues YYK_RS06365 SM00986 Uracil DNA glycosylase superfamily YYK_RS06365 SM00987 UreE urease accessory protein, C-terminal domain YYK_RS06405 SM00382 ATPases associated with a variety of cellular activities YYK_RS06450 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS06460 SM00382 ATPases associated with a variety of cellular activities YYK_RS06470 SM00235 Zinc-dependent metalloprotease YYK_RS06480 SM00849 Metallo-beta-lactamase superfamily YYK_RS06495 SM00382 ATPases associated with a variety of cellular activities YYK_RS06520 SM01061 CAT RNA binding domain YYK_RS06535 SM00028 Tetratricopeptide repeats YYK_RS06570 SM01192 YYK_RS06570 YYK_RS06570 SM01193 YYK_RS06570 YYK_RS06610 SM00387 Histidine kinase-like ATPases YYK_RS06610 SM00433 TopoisomeraseII YYK_RS06650 SM00830 Chorismate mutase type II YYK_RS06690 SM00382 ATPases associated with a variety of cellular activities YYK_RS06695 SM00382 ATPases associated with a variety of cellular activities YYK_RS06730 SM00642 Alpha-amylase domain YYK_RS06735 SM00642 Alpha-amylase domain YYK_RS06760 SM00342 helix_turn_helix, arabinose operon control protein YYK_RS06820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YYK_RS06825 SM00487 DEAD-like helicases superfamily YYK_RS06825 SM00490 helicase superfamily c-terminal domain YYK_RS06840 SM00365 Leucine-rich repeat, SDS22-like subfamily YYK_RS06880 SM01022 YYK_RS06880 YYK_RS06915 SM01321 YYK_RS06915 YYK_RS06925 SM00382 ATPases associated with a variety of cellular activities YYK_RS06930 SM00387 Histidine kinase-like ATPases YYK_RS06935 SM00448 cheY-homologous receiver domain YYK_RS06935 SM00862 Transcriptional regulatory protein, C terminal YYK_RS06960 SM00382 ATPases associated with a variety of cellular activities YYK_RS06965 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS07015 SM00731 SprT homologues. YYK_RS07095 SM00382 ATPases associated with a variety of cellular activities YYK_RS07125 SM00487 DEAD-like helicases superfamily YYK_RS07125 SM00490 helicase superfamily c-terminal domain YYK_RS07140 SM01321 YYK_RS07140 YYK_RS07145 SM00855 Phosphoglycerate mutase family YYK_RS07185 SM00411 bacterial (prokaryotic) histone like domain YYK_RS07215 SM00363 S4 RNA-binding domain YYK_RS07245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YYK_RS07245 SM00387 Histidine kinase-like ATPases YYK_RS07245 SM00388 His Kinase A (phosphoacceptor) domain YYK_RS07250 SM00448 cheY-homologous receiver domain YYK_RS07250 SM00862 Transcriptional regulatory protein, C terminal YYK_RS07260 SM00327 von Willebrand factor (vWF) type A domain YYK_RS07275 SM01131 YYK_RS07275 YYK_RS07290 SM01091 Transporter associated domain YYK_RS07295 SM00382 ATPases associated with a variety of cellular activities YYK_RS07355 SM00450 Rhodanese Homology Domain YYK_RS07365 SM00421 helix_turn_helix, Lux Regulon YYK_RS07365 SM00448 cheY-homologous receiver domain YYK_RS07380 SM00382 ATPases associated with a variety of cellular activities YYK_RS07395 SM00226 Low molecular weight phosphatase family YYK_RS07400 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. YYK_RS07410 SM00014 Acid phosphatase homologues YYK_RS07430 SM01234 YYK_RS07430 YYK_RS07435 SM00363 S4 RNA-binding domain YYK_RS07500 SM00967 RNA 2'-O ribose methyltransferase substrate binding YYK_RS07540 SM00487 DEAD-like helicases superfamily YYK_RS07540 SM00490 helicase superfamily c-terminal domain YYK_RS07585 SM00448 cheY-homologous receiver domain YYK_RS07585 SM00862 Transcriptional regulatory protein, C terminal YYK_RS07590 SM01350 YYK_RS07590 YYK_RS07610 SM00487 DEAD-like helicases superfamily YYK_RS07610 SM00490 helicase superfamily c-terminal domain YYK_RS07625 SM00740 YYK_RS07625 YYK_RS07640 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS07685 SM00900 YYK_RS07685 YYK_RS07750 SM00873 B3/4 domain YYK_RS07760 SM00382 ATPases associated with a variety of cellular activities YYK_RS07760 SM00930 YYK_RS07760 YYK_RS07835 SM00487 DEAD-like helicases superfamily YYK_RS07880 SM00878 Biotin carboxylase C-terminal domain YYK_RS07895 SM00825 Beta-ketoacyl synthase YYK_RS07900 SM00822 YYK_RS07900 YYK_RS07905 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YYK_RS07925 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS07950 SM01005 Alanine racemase, C-terminal domain YYK_RS07960 SM00957 SecA DEAD-like domain YYK_RS07960 SM00958 SecA preprotein cross-linking domain YYK_RS07980 SM00640 Glycosyl hydrolases family 32 YYK_RS07985 SM00354 helix_turn _helix lactose operon repressor YYK_RS08000 SM00841 Elongation factor P, C-terminal YYK_RS08000 SM01185 YYK_RS08000 YYK_RS08010 SM00382 ATPases associated with a variety of cellular activities YYK_RS08070 SM00861 Transketolase, pyrimidine binding domain YYK_RS08115 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS08115 SM00322 K homology RNA-binding domain YYK_RS08140 SM00382 ATPases associated with a variety of cellular activities YYK_RS08170 SM01120 YYK_RS08170 YYK_RS08170 SM01121 YYK_RS08170 YYK_RS08195 SM00382 ATPases associated with a variety of cellular activities YYK_RS08200 SM00382 ATPases associated with a variety of cellular activities YYK_RS08210 SM00936 Penicillin-binding protein 5, C-terminal domain YYK_RS08235 SM00382 ATPases associated with a variety of cellular activities YYK_RS08255 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS08260 SM00382 ATPases associated with a variety of cellular activities YYK_RS08270 SM00244 prohibitin homologues YYK_RS08355 SM00967 RNA 2'-O ribose methyltransferase substrate binding YYK_RS08380 SM00382 ATPases associated with a variety of cellular activities YYK_RS08390 SM00342 helix_turn_helix, arabinose operon control protein YYK_RS08390 SM00448 cheY-homologous receiver domain YYK_RS08435 SM00872 Alpha mannosidase, middle domain YYK_RS08440 SM01149 YYK_RS08440 YYK_RS08450 SM01208 YYK_RS08450 YYK_RS08460 SM00840 YYK_RS08460 YYK_RS08480 SM00316 Ribosomal protein S1-like RNA-binding domain YYK_RS08480 SM00322 K homology RNA-binding domain YYK_RS08515 SM01387 YYK_RS08515 YYK_RS08535 SM00363 S4 RNA-binding domain YYK_RS08575 SM01329 YYK_RS08575 YYK_RS08580 SM00917 LeuA allosteric (dimerisation) domain YYK_RS08605 SM00479 YYK_RS08605 YYK_RS08605 SM00481 DNA polymerase alpha chain like domain YYK_RS08625 SM01120 YYK_RS08625 YYK_RS08660 SM01323 YYK_RS08660 YYK_RS08665 SM00788 Adenylosuccinate synthetase YYK_RS08705 SM00382 ATPases associated with a variety of cellular activities YYK_RS08705 SM01086 C-terminal, D2-small domain, of ClpB protein YYK_RS08750 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YYK_RS08750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YYK_RS08800 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain YYK_RS08820 SM00382 ATPases associated with a variety of cellular activities YYK_RS08830 SM00530 Helix-turn-helix XRE-family like proteins YYK_RS08850 SM00650 Ribosomal RNA adenine dimethylases YYK_RS08890 SM00493 YYK_RS08890 YYK_RS08905 SM00393 Putative single-stranded nucleic acids-binding domain YYK_RS08905 SM01245 YYK_RS08905 YYK_RS08975 SM00850 LytTr DNA-binding domain YYK_RS08985 SM00947 Carbonic anhydrase YYK_RS08990 SM00382 ATPases associated with a variety of cellular activities YYK_RS08995 SM00855 Phosphoglycerate mutase family YYK_RS09005 SM00382 ATPases associated with a variety of cellular activities YYK_RS09010 SM00382 ATPases associated with a variety of cellular activities YYK_RS09015 SM00347 helix_turn_helix multiple antibiotic resistance protein YYK_RS09080 SM00861 Transketolase, pyrimidine binding domain YYK_RS09100 SM01007 Class II Aldolase and Adducin N-terminal domain YYK_RS09110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YYK_RS09130 SM00642 Alpha-amylase domain YYK_RS09135 SM00354 helix_turn _helix lactose operon repressor YYK_RS09140 SM00382 ATPases associated with a variety of cellular activities YYK_RS09150 SM00062 Bacterial periplasmic substrate-binding proteins YYK_RS09220 SM00382 ATPases associated with a variety of cellular activities YYK_RS09235 SM00529 Helix-turn-helix diphteria tox regulatory element YYK_RS09235 SM00899 YYK_RS09235 YYK_RS09270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YYK_RS09270 SM00954 Region found in RelA / SpoT proteins YYK_RS09340 SM01022 YYK_RS09340 YYK_RS09355 SM00382 ATPases associated with a variety of cellular activities YYK_RS09410 SM00850 LytTr DNA-binding domain YYK_RS09415 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YYK_RS09415 SM00534 ATPase domain of DNA mismatch repair MUTS family YYK_RS09425 SM00836 DALR anticodon binding domain YYK_RS09425 SM01016 Arginyl tRNA synthetase N terminal dom YYK_RS09430 SM00287 Bacterial SH3 domain homologues YYK_RS09470 SM00354 helix_turn _helix lactose operon repressor YYK_RS09475 SM00642 Alpha-amylase domain YYK_RS09510 SM01217 YYK_RS09510 YYK_RS09520 SM01217 YYK_RS09520 YYK_RS09525 SM00448 cheY-homologous receiver domain YYK_RS09525 SM00850 LytTr DNA-binding domain YYK_RS09550 SM00363 S4 RNA-binding domain YYK_RS09550 SM01390 YYK_RS09550 YYK_RS09580 SM01228 YYK_RS09580 YYK_RS09625 SM00257 Lysin motif YYK_RS09635 SM00382 ATPases associated with a variety of cellular activities YYK_RS09640 SM00382 ATPases associated with a variety of cellular activities YYK_RS09675 SM00116 Domain in cystathionine beta-synthase and other proteins. YYK_RS09675 SM01240 YYK_RS09675 YYK_RS09690 SM00382 ATPases associated with a variety of cellular activities YYK_RS09725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YYK_RS09730 SM00470 ParB-like nuclease domain