locus-tag	class	description
SSUSC84_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
SSUSC84_RS00010	COG0592	DNA-directed DNA polymerase activity
SSUSC84_RS00030	COG0012	GTP binding
SSUSC84_RS00035	COG0193	aminoacyl-tRNA hydrolase activity
SSUSC84_RS00040	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SSUSC84_RS00045	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SSUSC84_RS00065	COG0037	tRNA processing
SSUSC84_RS00075	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SSUSC84_RS00185	COG1792	Involved in formation and maintenance of cell shape
SSUSC84_RS00200	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SSUSC84_RS00205	COG0436	Aminotransferase
SSUSC84_RS00210	COG1381	Involved in DNA repair and RecF pathway recombination
SSUSC84_RS00215	COG0416	fatty acid biosynthetic process
SSUSC84_RS00220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SSUSC84_RS00230	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SSUSC84_RS00245	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SSUSC84_RS00250	COG0138	bifunctional purine biosynthesis protein purh
SSUSC84_RS00255	COG0151	Belongs to the GarS family
SSUSC84_RS00260	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SSUSC84_RS00280	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SSUSC84_RS00300	COG1131	(ABC) transporter
SSUSC84_RS00310	COG1132	(ABC) transporter
SSUSC84_RS00315	COG2255	four-way junction helicase activity
SSUSC84_RS00325	COG0546	phosphoglycolate phosphatase activity
SSUSC84_RS00350	COG0285	dihydrofolate synthase activity
SSUSC84_RS00365	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
SSUSC84_RS00370	COG0632	four-way junction helicase activity
SSUSC84_RS00380	COG0519	Catalyzes the synthesis of GMP from XMP
SSUSC84_RS00395	COG1393	Belongs to the ArsC family
SSUSC84_RS00400	COG4472	Bacterial protein of unknown function (DUF965)
SSUSC84_RS00405	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
SSUSC84_RS00410	COG3906	Belongs to the UPF0473 family
SSUSC84_RS00435	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SSUSC84_RS00440	COG0088	Forms part of the polypeptide exit tunnel
SSUSC84_RS00445	COG0089	rRNA binding
SSUSC84_RS00450	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SSUSC84_RS00455	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
SSUSC84_RS00460	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
SSUSC84_RS00465	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SSUSC84_RS00470	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
SSUSC84_RS00475	COG0255	Belongs to the universal ribosomal protein uL29 family
SSUSC84_RS00480	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
SSUSC84_RS00485	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SSUSC84_RS00490	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
SSUSC84_RS00495	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SSUSC84_RS00500	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
SSUSC84_RS00510	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SSUSC84_RS00520	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SSUSC84_RS00525	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
SSUSC84_RS00530	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
SSUSC84_RS00535	COG1841	ribosomal large subunit assembly
SSUSC84_RS00545	COG0201	protein transport
SSUSC84_RS00550	COG0563	adenylate kinase activity
SSUSC84_RS00555	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
SSUSC84_RS00560	COG0257	Belongs to the bacterial ribosomal protein bL36 family
SSUSC84_RS00565	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SSUSC84_RS00575	COG0202	RNA polymerase activity
SSUSC84_RS00665	COG0582	viral genome integration into host DNA
SSUSC84_RS00675	COG2946	Replication initiation factor
SSUSC84_RS00715	COG1121	(ABC) transporter
SSUSC84_RS00720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUSC84_RS00725	COG0803	Belongs to the bacterial solute-binding protein 9 family
SSUSC84_RS00725	COG3443	Belongs to the bacterial solute-binding protein 9 family
SSUSC84_RS00755	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUSC84_RS00760	COG0085	RNA polymerase activity
SSUSC84_RS00765	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SSUSC84_RS00780	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SSUSC84_RS00785	COG1459	type II secretion system
SSUSC84_RS00790	COG4537	Required for transformation and DNA binding
SSUSC84_RS00820	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SSUSC84_RS00830	COG0285	dihydrofolate synthase activity
SSUSC84_RS00835	COG1363	Peptidase, m42
SSUSC84_RS00845	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SSUSC84_RS00855	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUSC84_RS00880	COG0459	protein refolding
SSUSC84_RS00890	COG0049	tRNA binding
SSUSC84_RS00895	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SSUSC84_RS00900	COG3590	peptidase
SSUSC84_RS00910	COG0126	phosphoglycerate kinase activity
SSUSC84_RS00920	COG0789	Transcriptional regulator
SSUSC84_RS00925	COG0174	glutamine synthetase
SSUSC84_RS00940	COG1214	PFAM Peptidase M22, glycoprotease
SSUSC84_RS00950	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
SSUSC84_RS00955	COG2207	Transcriptional regulator
SSUSC84_RS00965	COG1175	transmembrane transport
SSUSC84_RS00970	COG0395	ABC-type sugar transport system, permease component
SSUSC84_RS00990	COG2855	membrane
SSUSC84_RS01015	COG1131	(ABC) transporter
SSUSC84_RS01020	COG2081	HI0933 family
SSUSC84_RS01025	COG2723	6-phospho-beta-galactosidase activity
SSUSC84_RS01035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUSC84_RS01050	COG3959	Transketolase, thiamine diphosphate binding domain
SSUSC84_RS01055	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
SSUSC84_RS01060	COG0584	glycerophosphoryl diester phosphodiesterase
SSUSC84_RS01065	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
SSUSC84_RS01070	COG2222	sugar isomerase
SSUSC84_RS01090	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SSUSC84_RS01095	COG1882	Formate acetyltransferase
SSUSC84_RS01110	COG2910	NAD(P)H-binding
SSUSC84_RS01135	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS01170	COG0363	glucosamine-6-phosphate deaminase activity
SSUSC84_RS01180	COG2217	Heavy metal translocating P-type atpase
SSUSC84_RS01185	COG2217	Heavy metal translocating P-type atpase
SSUSC84_RS01190	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SSUSC84_RS01195	COG0681	Belongs to the peptidase S26 family
SSUSC84_RS01215	COG0366	Alpha amylase catalytic
SSUSC84_RS01220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS01220	COG1263	PTS System
SSUSC84_RS01225	COG2188	Transcriptional regulator
SSUSC84_RS01240	COG1193	negative regulation of DNA recombination
SSUSC84_RS01250	COG3118	belongs to the thioredoxin family
SSUSC84_RS01255	COG0318	PFAM AMP-dependent synthetase and ligase
SSUSC84_RS01260	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SSUSC84_RS01260	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SSUSC84_RS01280	COG1136	(ABC) transporter
SSUSC84_RS01285	COG1115	amino acid carrier protein
SSUSC84_RS01290	COG0668	transmembrane transport
SSUSC84_RS01305	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SSUSC84_RS01310	COG0167	dihydroorotate dehydrogenase activity
SSUSC84_RS01315	COG2843	Capsule synthesis protein
SSUSC84_RS01320	COG0561	phosphatase activity
SSUSC84_RS01335	COG1131	(ABC) transporter
SSUSC84_RS01340	COG1309	transcriptional regulator
SSUSC84_RS01345	COG1511	domain protein
SSUSC84_RS01370	COG1346	cytolysis
SSUSC84_RS01375	COG2116	formate transmembrane transporter activity
SSUSC84_RS01380	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SSUSC84_RS01385	COG0433	COG0433 Predicted ATPase
SSUSC84_RS01390	COG0494	nUDIX hydrolase
SSUSC84_RS01415	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUSC84_RS01420	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SSUSC84_RS01425	COG0124	histidyl-tRNA synthetase
SSUSC84_RS01430	COG1064	alcohol dehydrogenase
SSUSC84_RS01435	COG1012	belongs to the aldehyde dehydrogenase family
SSUSC84_RS01435	COG1454	alcohol dehydrogenase
SSUSC84_RS01445	COG4988	ABC transporter
SSUSC84_RS01450	COG1132	(ABC) transporter
SSUSC84_RS01465	COG1129	ABC transporter
SSUSC84_RS01470	COG0534	Mate efflux family protein
SSUSC84_RS01475	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SSUSC84_RS01490	COG1304	FMN binding
SSUSC84_RS01495	COG1132	(ABC) transporter
SSUSC84_RS01500	COG1132	(ABC) transporter
SSUSC84_RS01505	COG3830	Belongs to the UPF0237 family
SSUSC84_RS01510	COG2848	UPF0210 protein
SSUSC84_RS01515	COG0588	phosphoglycerate mutase activity
SSUSC84_RS01520	COG1420	regulation of RNA biosynthetic process
SSUSC84_RS01525	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
SSUSC84_RS01530	COG0443	Heat shock 70 kDa protein
SSUSC84_RS01535	COG0484	heat shock protein binding
SSUSC84_RS01540	COG0095	Lipoate-protein ligase
SSUSC84_RS01550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS01555	COG0765	amino acid transport
SSUSC84_RS01560	COG3655	Transcriptional regulator
SSUSC84_RS01570	COG2217	Heavy metal translocating P-type atpase
SSUSC84_RS01595	COG4475	Protein of unknown function (DUF436)
SSUSC84_RS01625	COG4221	oxidoreductase activity
SSUSC84_RS01630	COG0446	pyridine nucleotide-disulphide oxidoreductase
SSUSC84_RS01630	COG1902	pentaerythritol trinitrate reductase activity
SSUSC84_RS01635	COG1959	2 iron, 2 sulfur cluster binding
SSUSC84_RS01655	COG0544	peptidyl-prolyl cis-trans isomerase activity
SSUSC84_RS01675	COG3343	RNA polymerase activity
SSUSC84_RS01680	COG0504	CTP synthase activity
SSUSC84_RS01690	COG0191	fructose-bisphosphate aldolase activity
SSUSC84_RS01695	COG0227	Belongs to the bacterial ribosomal protein bL28 family
SSUSC84_RS01730	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SSUSC84_RS01735	COG0252	asparaginase activity
SSUSC84_RS01750	COG0589	response to stress
SSUSC84_RS01755	COG0436	Aminotransferase
SSUSC84_RS01760	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
SSUSC84_RS01765	COG1335	isochorismatase
SSUSC84_RS01770	COG0335	large ribosomal subunit rRNA binding
SSUSC84_RS01780	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SSUSC84_RS01785	COG0154	amidase activity
SSUSC84_RS01790	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SSUSC84_RS01795	COG0232	Belongs to the dGTPase family. Type 2 subfamily
SSUSC84_RS01800	COG1609	Transcriptional regulator
SSUSC84_RS01805	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SSUSC84_RS01810	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
SSUSC84_RS01820	COG3142	Participates in the control of copper homeostasis
SSUSC84_RS01835	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SSUSC84_RS01840	COG1534	Rna-binding protein
SSUSC84_RS01845	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
SSUSC84_RS01850	COG1713	HD superfamily hydrolase involved in NAD metabolism
SSUSC84_RS01860	COG1335	isochorismatase
SSUSC84_RS01865	COG0799	negative regulation of ribosome biogenesis
SSUSC84_RS01870	COG2226	methyltransferase
SSUSC84_RS01875	COG5290	Psort location Cytoplasmic, score
SSUSC84_RS01885	COG0789	Transcriptional regulator
SSUSC84_RS01890	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SSUSC84_RS01910	COG0242	peptide deformylase activity
SSUSC84_RS01920	COG1640	4-alpha-glucanotransferase
SSUSC84_RS01925	COG0058	SHG alpha-glucan phosphorylase activity
SSUSC84_RS01940	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS01940	COG1263	PTS System
SSUSC84_RS01940	COG2190	(PTS) system
SSUSC84_RS01955	COG0217	transcriptional regulatory protein
SSUSC84_RS01965	COG4720	Psort location CytoplasmicMembrane, score
SSUSC84_RS01975	COG1054	Belongs to the UPF0176 family
SSUSC84_RS01985	COG1122	ATPase activity
SSUSC84_RS02000	COG0357	Ribosomal RNA small subunit methyltransferase G
SSUSC84_RS02005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUSC84_RS02010	COG3331	DNA recombination
SSUSC84_RS02015	COG4474	Belongs to the UPF0398 family
SSUSC84_RS02020	COG3599	regulation of cell shape
SSUSC84_RS02025	COG0116	Belongs to the methyltransferase superfamily
SSUSC84_RS02035	COG1854	S-ribosylhomocysteine lyase activity
SSUSC84_RS02040	COG1418	mRNA catabolic process
SSUSC84_RS02050	COG1758	RNA polymerase activity
SSUSC84_RS02055	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SSUSC84_RS02060	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SSUSC84_RS02065	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SSUSC84_RS02065	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SSUSC84_RS02070	COG0631	protein serine/threonine phosphatase activity
SSUSC84_RS02075	COG2815	serine threonine protein kinase
SSUSC84_RS02075	COG0515	serine threonine protein kinase
SSUSC84_RS02100	COG1098	S1 RNA binding domain
SSUSC84_RS02110	COG1739	Uncharacterized protein family UPF0029
SSUSC84_RS02115	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SSUSC84_RS02195	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SSUSC84_RS02200	COG2137	regulation of response to DNA damage stimulus
SSUSC84_RS02205	COG3557	Belongs to the UPF0374 family
SSUSC84_RS02215	COG2188	Transcriptional regulator
SSUSC84_RS02220	COG2188	Transcriptional regulator
SSUSC84_RS02230	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS02240	COG3716	PTS system mannose fructose sorbose family IID component
SSUSC84_RS02250	COG2017	converts alpha-aldose to the beta-anomer
SSUSC84_RS02265	COG0346	lactoylglutathione lyase activity
SSUSC84_RS02315	COG1217	gtp-binding protein TYPA
SSUSC84_RS02330	COG0681	Belongs to the peptidase S26 family
SSUSC84_RS02360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SSUSC84_RS02375	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SSUSC84_RS02380	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SSUSC84_RS02385	COG1799	cell septum assembly
SSUSC84_RS02400	COG3599	regulation of cell shape
SSUSC84_RS02420	COG0406	alpha-ribazole phosphatase activity
SSUSC84_RS02420	COG0494	nUDIX hydrolase
SSUSC84_RS02425	COG0542	response to heat
SSUSC84_RS02430	COG4703	Protein of unknown function (DUF1797)
SSUSC84_RS02435	COG0765	amino acid transport
SSUSC84_RS02445	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
SSUSC84_RS02475	COG0789	Transcriptional regulator
SSUSC84_RS02490	COG0826	peptidase U32
SSUSC84_RS02505	COG4443	Transcriptional Coactivator p15 (PC4)
SSUSC84_RS02510	COG1268	BioY protein
SSUSC84_RS02515	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
SSUSC84_RS02520	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SSUSC84_RS02525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SSUSC84_RS02530	COG1136	(ABC) transporter
SSUSC84_RS02535	COG0577	efflux transmembrane transporter activity
SSUSC84_RS02550	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SSUSC84_RS02560	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SSUSC84_RS02570	COG3859	Proton-coupled thiamine transporter YuaJ
SSUSC84_RS02590	COG0772	Belongs to the SEDS family
SSUSC84_RS02595	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
SSUSC84_RS02600	COG1595	DNA-templated transcription, initiation
SSUSC84_RS02610	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SSUSC84_RS02615	COG0149	triose-phosphate isomerase activity
SSUSC84_RS02625	COG1078	dGTPase activity
SSUSC84_RS02640	COG2826	transposase and inactivated derivatives, IS30 family
SSUSC84_RS02645	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
SSUSC84_RS02655	COG1131	(ABC) transporter
SSUSC84_RS02660	COG2188	Transcriptional regulator
SSUSC84_RS02670	COG0205	6-phosphofructokinase activity
SSUSC84_RS02675	COG0469	pyruvate kinase activity
SSUSC84_RS02685	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SSUSC84_RS02690	COG2755	lipolytic protein G-D-S-L family
SSUSC84_RS02690	COG0657	acetylesterase activity
SSUSC84_RS02700	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SSUSC84_RS02705	COG0765	amino acid transport
SSUSC84_RS02710	COG1126	abc transporter atp-binding protein
SSUSC84_RS02715	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS02730	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
SSUSC84_RS02735	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
SSUSC84_RS02740	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SSUSC84_RS02755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SSUSC84_RS02760	COG3022	response to hydroperoxide
SSUSC84_RS02770	COG3944	biosynthesis protein
SSUSC84_RS02780	COG4464	protein tyrosine phosphatase activity
SSUSC84_RS02795	COG0438	transferase activity, transferring glycosyl groups
SSUSC84_RS02810	COG1216	Glycosyl transferase, family 2
SSUSC84_RS02810	COG1442	glycosyl transferase family 8
SSUSC84_RS02815	COG1442	glycosyl transferase family 8
SSUSC84_RS02815	COG1216	Glycosyl transferase, family 2
SSUSC84_RS02840	COG2089	acid synthase
SSUSC84_RS02855	COG1083	cytidylyl-transferase
SSUSC84_RS02855	COG2755	lipolytic protein G-D-S-L family
SSUSC84_RS02930	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
SSUSC84_RS02935	COG0077	Prephenate dehydratase
SSUSC84_RS02945	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SSUSC84_RS02950	COG0562	UDP-galactopyranose mutase
SSUSC84_RS02955	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
SSUSC84_RS02980	COG0436	Aminotransferase
SSUSC84_RS03000	COG0534	Mate efflux family protein
SSUSC84_RS03005	COG0251	oxidation-reduction process
SSUSC84_RS03010	COG1660	Displays ATPase and GTPase activities
SSUSC84_RS03015	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SSUSC84_RS03020	COG1481	regulation of sporulation
SSUSC84_RS03035	COG0454	-acetyltransferase
SSUSC84_RS03040	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SSUSC84_RS03045	COG0549	Belongs to the carbamate kinase family
SSUSC84_RS03050	COG1288	antiporter activity
SSUSC84_RS03055	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SSUSC84_RS03060	COG3064	Membrane
SSUSC84_RS03060	COG3583	domain protein
SSUSC84_RS03060	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SSUSC84_RS03065	COG1438	arginine binding
SSUSC84_RS03070	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
SSUSC84_RS03075	COG0363	glucosamine-6-phosphate deaminase activity
SSUSC84_RS03105	COG1696	Membrane protein involved in D-alanine export
SSUSC84_RS03110	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SSUSC84_RS03115	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SSUSC84_RS03125	COG0435	Glutathione S-transferase
SSUSC84_RS03130	COG1187	pseudouridine synthase activity
SSUSC84_RS03135	COG0386	Belongs to the glutathione peroxidase family
SSUSC84_RS03140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SSUSC84_RS03145	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SSUSC84_RS03150	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SSUSC84_RS03155	COG1120	ATPase activity
SSUSC84_RS03160	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SSUSC84_RS03165	COG0204	Acyl-transferase
SSUSC84_RS03170	COG1596	polysaccharide export
SSUSC84_RS03170	COG1555	photosystem II stabilization
SSUSC84_RS03175	COG0658	competence protein
SSUSC84_RS03175	COG2333	competence protein COMEC
SSUSC84_RS03185	COG0517	IMP dehydrogenase activity
SSUSC84_RS03200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUSC84_RS03205	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SSUSC84_RS03210	COG0470	DNA polymerase III
SSUSC84_RS03215	COG4467	Involved in initiation control of chromosome replication
SSUSC84_RS03225	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
SSUSC84_RS03235	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SSUSC84_RS03240	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SSUSC84_RS03245	COG1393	Belongs to the ArsC family
SSUSC84_RS03255	COG0708	Exodeoxyribonuclease III
SSUSC84_RS03265	COG0531	amino acid
SSUSC84_RS03315	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SSUSC84_RS03320	COG4684	Psort location CytoplasmicMembrane, score
SSUSC84_RS03325	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SSUSC84_RS03335	COG2759	Belongs to the formate--tetrahydrofolate ligase family
SSUSC84_RS03345	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SSUSC84_RS03350	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
SSUSC84_RS03365	COG0732	type I restriction modification DNA specificity domain
SSUSC84_RS03400	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SSUSC84_RS03405	COG1349	DNA-binding transcription factor activity
SSUSC84_RS03415	COG1447	Phosphotransferase system cellobiose-specific component IIA
SSUSC84_RS03420	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS03425	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS03430	COG1882	Formate acetyltransferase
SSUSC84_RS03450	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SSUSC84_RS03455	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SSUSC84_RS03460	COG0446	pyridine nucleotide-disulphide oxidoreductase
SSUSC84_RS03470	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
SSUSC84_RS03475	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SSUSC84_RS03480	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SSUSC84_RS03485	COG0346	lactoylglutathione lyase activity
SSUSC84_RS03495	COG1164	Oligoendopeptidase f
SSUSC84_RS03510	COG0210	DNA helicase
SSUSC84_RS03525	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
SSUSC84_RS03540	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SSUSC84_RS03555	COG1122	ATPase activity
SSUSC84_RS03560	COG1122	ATPase activity
SSUSC84_RS03565	COG1011	Hydrolase
SSUSC84_RS03595	COG1131	(ABC) transporter
SSUSC84_RS03625	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
SSUSC84_RS03630	COG1074	ATP-dependent DNA helicase activity
SSUSC84_RS03640	COG0187	DNA topoisomerase II activity
SSUSC84_RS03665	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SSUSC84_RS03675	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SSUSC84_RS03695	COG0539	negative regulation of cytoplasmic translation
SSUSC84_RS03720	COG1104	cysteine desulfurase activity
SSUSC84_RS03725	COG0301	tRNA thio-modification
SSUSC84_RS03730	COG1114	Component of the transport system for branched-chain amino acids
SSUSC84_RS03735	COG0261	This protein binds to 23S rRNA in the presence of protein L20
SSUSC84_RS03740	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SSUSC84_RS03760	COG0564	pseudouridine synthase activity
SSUSC84_RS03765	COG2824	Alkylphosphonate utilization operon protein PhnA
SSUSC84_RS03775	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
SSUSC84_RS03780	COG0540	Belongs to the ATCase OTCase family
SSUSC84_RS03785	COG0505	Belongs to the CarA family
SSUSC84_RS03795	COG2136	Putative SAM-dependent methyltransferase
SSUSC84_RS03795	COG2521	methyltransferase
SSUSC84_RS03800	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
SSUSC84_RS03810	COG0228	four-way junction DNA binding
SSUSC84_RS03825	COG1132	(ABC) transporter
SSUSC84_RS03830	COG0726	polysaccharide deacetylase
SSUSC84_RS03835	COG0460	homoserine dehydrogenase
SSUSC84_RS03840	COG0083	homoserine kinase activity
SSUSC84_RS03845	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SSUSC84_RS03850	COG3842	ATPase activity
SSUSC84_RS03855	COG1176	ABC-type spermidine putrescine transport system, permease component I
SSUSC84_RS03860	COG1177	transmembrane transport
SSUSC84_RS03870	COG0038	chloride channel
SSUSC84_RS03890	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SSUSC84_RS03895	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SSUSC84_RS03910	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SSUSC84_RS03915	COG0336	Belongs to the RNA methyltransferase TrmD family
SSUSC84_RS03920	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SSUSC84_RS03925	COG1349	DNA-binding transcription factor activity
SSUSC84_RS03930	COG1105	Belongs to the carbohydrate kinase PfkB family
SSUSC84_RS03935	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUSC84_RS03935	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SSUSC84_RS03935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SSUSC84_RS03945	COG1307	EDD domain protein, DegV family
SSUSC84_RS03950	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
SSUSC84_RS03955	COG0617	tRNA 3'-terminal CCA addition
SSUSC84_RS03960	COG0488	(ABC) transporter
SSUSC84_RS03970	COG1940	carbohydrate kinase activity
SSUSC84_RS03985	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
SSUSC84_RS03990	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SSUSC84_RS04000	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
SSUSC84_RS04020	COG0481	GTPase activity
SSUSC84_RS04045	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
SSUSC84_RS04050	COG2890	protein-(glutamine-N5) methyltransferase activity
SSUSC84_RS04055	COG0009	L-threonylcarbamoyladenylate synthase
SSUSC84_RS04065	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SSUSC84_RS04075	COG0741	lytic transglycosylase activity
SSUSC84_RS04080	COG4221	oxidoreductase activity
SSUSC84_RS04105	COG1401	restriction endodeoxyribonuclease activity
SSUSC84_RS04110	COG4268	DNA restriction-modification system
SSUSC84_RS04180	COG2188	Transcriptional regulator
SSUSC84_RS04185	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
SSUSC84_RS04190	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SSUSC84_RS04205	COG1660	Displays ATPase and GTPase activities
SSUSC84_RS04215	COG4974	Belongs to the 'phage' integrase family
SSUSC84_RS04230	COG0745	RESPONSE REGULATOR receiver
SSUSC84_RS04250	COG1136	(ABC) transporter
SSUSC84_RS04290	COG2382	esterase
SSUSC84_RS04300	COG2207	Transcriptional regulator
SSUSC84_RS04300	COG3708	Transcriptional regulator
SSUSC84_RS04305	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
SSUSC84_RS04310	COG0647	UMP catabolic process
SSUSC84_RS04315	COG4974	Belongs to the 'phage' integrase family
SSUSC84_RS04325	COG1396	sequence-specific DNA binding
SSUSC84_RS04350	COG1131	(ABC) transporter
SSUSC84_RS04355	COG1132	(ABC) transporter
SSUSC84_RS04370	COG3843	relaxase mobilization nuclease domain protein
SSUSC84_RS04430	COG0791	NLP P60 protein
SSUSC84_RS04430	COG0741	lytic transglycosylase activity
SSUSC84_RS04460	COG2946	Replication initiation factor
SSUSC84_RS04465	COG1674	ftsk spoiiie
SSUSC84_RS04490	COG0542	response to heat
SSUSC84_RS04495	COG1396	sequence-specific DNA binding
SSUSC84_RS04525	COG2197	response regulator
SSUSC84_RS04550	COG1132	(ABC) transporter
SSUSC84_RS04585	COG2226	methyltransferase
SSUSC84_RS04595	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SSUSC84_RS04710	COG0270	DNA (cytosine-5-)-methyltransferase activity
SSUSC84_RS04725	COG0222	ribosome binding
SSUSC84_RS04730	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
SSUSC84_RS04735	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SSUSC84_RS04740	COG0758	DNA mediated transformation
SSUSC84_RS04745	COG0110	maltose O-acetyltransferase activity
SSUSC84_RS04750	COG1937	Protein conserved in bacteria
SSUSC84_RS04760	COG0446	pyridine nucleotide-disulphide oxidoreductase
SSUSC84_RS04770	COG1272	protein, Hemolysin III
SSUSC84_RS04780	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SSUSC84_RS04785	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SSUSC84_RS04800	COG0737	Belongs to the 5'-nucleotidase family
SSUSC84_RS04810	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
SSUSC84_RS04815	COG0463	Glycosyl transferase, family 2
SSUSC84_RS04825	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
SSUSC84_RS04830	COG0284	orotidine-5'-phosphate decarboxylase activity
SSUSC84_RS04835	COG0167	dihydroorotate dehydrogenase activity
SSUSC84_RS04860	COG0297	glycogen (starch) synthase activity
SSUSC84_RS04870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS04875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS04890	COG3583	domain protein
SSUSC84_RS04915	COG1126	abc transporter atp-binding protein
SSUSC84_RS04925	COG0488	(ABC) transporter
SSUSC84_RS04930	COG2873	o-acetylhomoserine
SSUSC84_RS04955	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS04955	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS04965	COG3711	transcriptional antiterminator
SSUSC84_RS04970	COG3684	Belongs to the aldolase LacD family
SSUSC84_RS04975	COG1105	Belongs to the carbohydrate kinase PfkB family
SSUSC84_RS04980	COG1105	Belongs to the carbohydrate kinase PfkB family
SSUSC84_RS04985	COG0698	ribose 5-phosphate isomerase
SSUSC84_RS04990	COG0698	ribose 5-phosphate isomerase
SSUSC84_RS05000	COG1349	DNA-binding transcription factor activity
SSUSC84_RS05030	COG1396	sequence-specific DNA binding
SSUSC84_RS05035	COG1194	a g-specific adenine glycosylase
SSUSC84_RS05045	COG1132	(ABC) transporter
SSUSC84_RS05050	COG1132	(ABC) transporter
SSUSC84_RS05055	COG0280	phosphate acetyltransferase
SSUSC84_RS05060	COG0564	pseudouridine synthase activity
SSUSC84_RS05065	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SSUSC84_RS05070	COG2357	RelA SpoT domain protein
SSUSC84_RS05075	COG4116	CYTH
SSUSC84_RS05085	COG1104	cysteine desulfurase activity
SSUSC84_RS05100	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
SSUSC84_RS05105	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SSUSC84_RS05115	COG3764	Sortase (surface protein transpeptidase)
SSUSC84_RS05120	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SSUSC84_RS05125	COG0039	L-malate dehydrogenase activity
SSUSC84_RS05130	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SSUSC84_RS05135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SSUSC84_RS05140	COG1079	Belongs to the binding-protein-dependent transport system permease family
SSUSC84_RS05145	COG4603	Belongs to the binding-protein-dependent transport system permease family
SSUSC84_RS05150	COG3845	ABC transporter
SSUSC84_RS05155	COG1744	ABC transporter substrate-binding protein PnrA-like
SSUSC84_RS05170	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
SSUSC84_RS05175	COG2813	Specifically methylates the guanine in position
SSUSC84_RS05180	COG1072	(Pantothenic acid kinase))
SSUSC84_RS05200	COG5002	protein histidine kinase activity
SSUSC84_RS05205	COG0745	RESPONSE REGULATOR receiver
SSUSC84_RS05220	COG0704	Plays a role in the regulation of phosphate uptake
SSUSC84_RS05225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SSUSC84_RS05230	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SSUSC84_RS05235	COG0581	inorganic phosphate transmembrane transporter activity
SSUSC84_RS05240	COG0573	inorganic phosphate transmembrane transporter activity
SSUSC84_RS05250	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
SSUSC84_RS05250	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SSUSC84_RS05255	COG0483	inositol monophosphate 1-phosphatase activity
SSUSC84_RS05260	COG4476	Belongs to the UPF0223 family
SSUSC84_RS05265	COG1393	Belongs to the ArsC family
SSUSC84_RS05270	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SSUSC84_RS05275	COG0196	riboflavin kinase activity
SSUSC84_RS05280	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SSUSC84_RS05340	COG0561	phosphatase activity
SSUSC84_RS05345	COG2195	Cleaves the N-terminal amino acid of tripeptides
SSUSC84_RS05380	COG3759	membrane
SSUSC84_RS05385	COG1846	Transcriptional regulator
SSUSC84_RS05400	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SSUSC84_RS05405	COG2610	gluconate transmembrane transporter activity
SSUSC84_RS05425	COG0302	gtp cyclohydrolase
SSUSC84_RS05430	COG1051	belongs to the nudix hydrolase family
SSUSC84_RS05455	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUSC84_RS05455	COG0072	phenylalanine-tRNA ligase activity
SSUSC84_RS05485	COG1028	Short-chain dehydrogenase reductase Sdr
SSUSC84_RS05490	COG1312	Catalyzes the dehydration of D-mannonate
SSUSC84_RS05500	COG0800	Aldolase
SSUSC84_RS05510	COG3250	beta-galactosidase activity
SSUSC84_RS05520	COG2211	Major facilitator Superfamily
SSUSC84_RS05535	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SSUSC84_RS05545	COG0355	proton-transporting ATP synthase activity, rotational mechanism
SSUSC84_RS05550	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
SSUSC84_RS05555	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
SSUSC84_RS05560	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
SSUSC84_RS05565	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SSUSC84_RS05570	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SSUSC84_RS05575	COG0356	it plays a direct role in the translocation of protons across the membrane
SSUSC84_RS05585	COG1597	lipid kinase activity
SSUSC84_RS05595	COG0701	Predicted permease
SSUSC84_RS05600	COG3689	TIGRFAM TIGR03943 family protein
SSUSC84_RS05605	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SSUSC84_RS05620	COG0552	protein localization to endoplasmic reticulum
SSUSC84_RS05625	COG0561	phosphatase activity
SSUSC84_RS05630	COG0561	phosphatase activity
SSUSC84_RS05635	COG1196	nuclear chromosome segregation
SSUSC84_RS05660	COG2826	transposase and inactivated derivatives, IS30 family
SSUSC84_RS05675	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUSC84_RS05680	COG0538	isocitrate dehydrogenase activity
SSUSC84_RS05685	COG0372	Belongs to the citrate synthase family
SSUSC84_RS05690	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SSUSC84_RS05695	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SSUSC84_RS05700	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SSUSC84_RS05710	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SSUSC84_RS05715	COG1609	Transcriptional regulator
SSUSC84_RS05730	COG5492	domain, Protein
SSUSC84_RS05735	COG5492	domain, Protein
SSUSC84_RS05740	COG5492	domain, Protein
SSUSC84_RS05750	COG3716	PTS system mannose fructose sorbose family IID component
SSUSC84_RS05760	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS05765	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
SSUSC84_RS05790	COG1028	Short-chain dehydrogenase reductase Sdr
SSUSC84_RS05825	COG1476	TRANSCRIPTIONal
SSUSC84_RS05850	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SSUSC84_RS05860	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SSUSC84_RS05865	COG4122	O-methyltransferase activity
SSUSC84_RS05890	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUSC84_RS05890	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SSUSC84_RS05900	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SSUSC84_RS05905	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SSUSC84_RS05910	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SSUSC84_RS05915	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SSUSC84_RS05920	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SSUSC84_RS05920	COG1116	anion transmembrane transporter activity
SSUSC84_RS05925	COG4120	Belongs to the binding-protein-dependent transport system permease family
SSUSC84_RS05945	COG3684	Belongs to the aldolase LacD family
SSUSC84_RS05955	COG3679	Belongs to the UPF0342 family
SSUSC84_RS05960	COG0287	Prephenate dehydrogenase
SSUSC84_RS05965	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
SSUSC84_RS05970	COG0710	3-dehydroquinate dehydratase activity
SSUSC84_RS05975	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SSUSC84_RS05980	COG1368	sulfuric ester hydrolase activity
SSUSC84_RS05995	COG0291	Belongs to the bacterial ribosomal protein bL35 family
SSUSC84_RS06005	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SSUSC84_RS06035	COG1216	Glycosyl transferase, family 2
SSUSC84_RS06050	COG1216	Glycosyl transferase, family 2
SSUSC84_RS06050	COG1442	glycosyl transferase family 8
SSUSC84_RS06055	COG1442	glycosyl transferase family 8
SSUSC84_RS06085	COG0463	Glycosyl transferase, family 2
SSUSC84_RS06115	COG1091	dTDP-4-dehydrorhamnose reductase activity
SSUSC84_RS06120	COG1088	dTDP-glucose 4,6-dehydratase activity
SSUSC84_RS06135	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SSUSC84_RS06145	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SSUSC84_RS06150	COG2384	SAM-dependent methyltransferase
SSUSC84_RS06165	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SSUSC84_RS06180	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SSUSC84_RS06180	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SSUSC84_RS06185	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SSUSC84_RS06195	COG0300	oxidoreductase activity
SSUSC84_RS06200	COG1234	tRNA 3'-trailer cleavage
SSUSC84_RS06210	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SSUSC84_RS06215	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
SSUSC84_RS06225	COG2807	transmembrane transport
SSUSC84_RS06230	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SSUSC84_RS06235	COG1702	phosphate starvation-inducible protein PhoH
SSUSC84_RS06240	COG4479	Belongs to the UPF0346 family
SSUSC84_RS06255	COG2996	Protein conserved in bacteria
SSUSC84_RS06260	COG0233	cytoplasmic translational termination
SSUSC84_RS06265	COG0528	UMP kinase activity
SSUSC84_RS06270	COG2244	polysaccharide biosynthetic process
SSUSC84_RS06275	COG0625	glutathione transferase activity
SSUSC84_RS06300	COG0346	lactoylglutathione lyase activity
SSUSC84_RS06305	COG1674	ftsk spoiiie
SSUSC84_RS06305	COG0697	spore germination
SSUSC84_RS06310	COG1621	beta-fructofuranosidase activity
SSUSC84_RS06320	COG0395	ABC-type sugar transport system, permease component
SSUSC84_RS06325	COG4209	transmembrane transport
SSUSC84_RS06330	COG1609	Transcriptional regulator
SSUSC84_RS06350	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SSUSC84_RS06365	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SSUSC84_RS06375	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SSUSC84_RS06385	COG1181	Belongs to the D-alanine--D-alanine ligase family
SSUSC84_RS06390	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
SSUSC84_RS06395	COG0768	penicillin binding
SSUSC84_RS06405	COG0488	(ABC) transporter
SSUSC84_RS06410	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SSUSC84_RS06420	COG0745	RESPONSE REGULATOR receiver
SSUSC84_RS06425	COG1126	abc transporter atp-binding protein
SSUSC84_RS06430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS06435	COG0765	amino acid transport
SSUSC84_RS06440	COG0765	amino acid transport
SSUSC84_RS06445	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SSUSC84_RS06460	COG0438	transferase activity, transferring glycosyl groups
SSUSC84_RS06475	COG1609	Transcriptional regulator
SSUSC84_RS06485	COG0343	queuine tRNA-ribosyltransferase activity
SSUSC84_RS06495	COG1832	CoA-binding protein
SSUSC84_RS06505	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SSUSC84_RS06505	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SSUSC84_RS06520	COG1136	(ABC) transporter
SSUSC84_RS06530	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SSUSC84_RS06535	COG2217	Heavy metal translocating P-type atpase
SSUSC84_RS06550	COG1063	alcohol dehydrogenase
SSUSC84_RS06555	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
SSUSC84_RS06560	COG0557	exoribonuclease II activity
SSUSC84_RS06570	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUSC84_RS06575	COG2814	Major facilitator Superfamily
SSUSC84_RS06585	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
SSUSC84_RS06590	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
SSUSC84_RS06595	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SSUSC84_RS06605	COG1737	Transcriptional regulator
SSUSC84_RS06615	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
SSUSC84_RS06625	COG1011	Hydrolase
SSUSC84_RS06630	COG1132	(ABC) transporter
SSUSC84_RS06635	COG1132	(ABC) transporter
SSUSC84_RS06660	COG2177	Part of the ABC transporter FtsEX involved in
SSUSC84_RS06665	COG2884	Cell division ATP-binding protein ftsE
SSUSC84_RS06670	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SSUSC84_RS06675	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SSUSC84_RS06700	COG2826	transposase and inactivated derivatives, IS30 family
SSUSC84_RS06730	COG2151	metal-sulfur cluster biosynthetic enzyme
SSUSC84_RS06735	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SSUSC84_RS06740	COG0358	DNA primase activity
SSUSC84_RS06745	COG1970	mechanosensitive ion channel activity
SSUSC84_RS06750	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SSUSC84_RS06755	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SSUSC84_RS06765	COG0647	UMP catabolic process
SSUSC84_RS06770	COG1051	belongs to the nudix hydrolase family
SSUSC84_RS06780	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SSUSC84_RS06790	COG0813	purine-nucleoside phosphorylase activity
SSUSC84_RS06795	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
SSUSC84_RS06805	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
SSUSC84_RS06810	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SSUSC84_RS06815	COG0732	type I restriction modification DNA specificity domain
SSUSC84_RS06835	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SSUSC84_RS06850	COG2268	Band 7 protein
SSUSC84_RS06855	COG1704	LemA family
SSUSC84_RS06865	COG1573	uracil-dna glycosylase
SSUSC84_RS06900	COG2226	methyltransferase
SSUSC84_RS06905	COG0488	(ABC) transporter
SSUSC84_RS06910	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SSUSC84_RS06925	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SSUSC84_RS06930	COG3442	glutamine amidotransferase
SSUSC84_RS06935	COG2226	methyltransferase
SSUSC84_RS06950	COG0488	(ABC) transporter
SSUSC84_RS06985	COG3842	ATPase activity
SSUSC84_RS07005	COG2190	(PTS) system
SSUSC84_RS07005	COG1263	PTS System
SSUSC84_RS07005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS07010	COG3711	transcriptional antiterminator
SSUSC84_RS07015	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SSUSC84_RS07020	COG3527	Alpha-acetolactate decarboxylase
SSUSC84_RS07030	COG0628	permease
SSUSC84_RS07035	COG2706	6-phosphogluconolactonase activity
SSUSC84_RS07045	COG1011	Hydrolase
SSUSC84_RS07085	COG0560	Phosphoserine phosphatase
SSUSC84_RS07090	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
SSUSC84_RS07095	COG0187	DNA topoisomerase II activity
SSUSC84_RS07100	COG0693	protein deglycase activity
SSUSC84_RS07105	COG0772	Belongs to the SEDS family
SSUSC84_RS07110	COG0582	viral genome integration into host DNA
SSUSC84_RS07195	COG0582	viral genome integration into host DNA
SSUSC84_RS07210	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SSUSC84_RS07215	COG0716	FMN binding
SSUSC84_RS07225	COG1605	Chorismate mutase
SSUSC84_RS07225	COG0287	Prephenate dehydrogenase
SSUSC84_RS07230	COG0038	chloride channel
SSUSC84_RS07240	COG0737	Belongs to the 5'-nucleotidase family
SSUSC84_RS07245	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SSUSC84_RS07250	COG1466	dna polymerase III delta subunit
SSUSC84_RS07285	COG0683	leucine binding
SSUSC84_RS07300	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SSUSC84_RS07305	COG0366	Alpha amylase catalytic
SSUSC84_RS07315	COG0395	ABC-type sugar transport system, permease component
SSUSC84_RS07320	COG1175	transmembrane transport
SSUSC84_RS07325	COG1653	transport
SSUSC84_RS07335	COG2207	Transcriptional regulator
SSUSC84_RS07340	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SSUSC84_RS07345	COG0626	cystathionine gamma-synthase activity
SSUSC84_RS07365	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SSUSC84_RS07370	COG2827	Endonuclease containing a URI domain
SSUSC84_RS07395	COG0640	Transcriptional regulator
SSUSC84_RS07400	COG0513	Belongs to the DEAD box helicase family
SSUSC84_RS07405	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUSC84_RS07445	COG0494	nUDIX hydrolase
SSUSC84_RS07450	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SSUSC84_RS07465	COG1028	Short-chain dehydrogenase reductase Sdr
SSUSC84_RS07495	COG0577	efflux transmembrane transporter activity
SSUSC84_RS07500	COG1136	(ABC) transporter
SSUSC84_RS07505	COG2205	protein histidine kinase activity
SSUSC84_RS07520	COG0436	Aminotransferase
SSUSC84_RS07530	COG1174	glycine betaine transport
SSUSC84_RS07535	COG0517	IMP dehydrogenase activity
SSUSC84_RS07535	COG1125	glycine betaine transport
SSUSC84_RS07555	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
SSUSC84_RS07560	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
SSUSC84_RS07565	COG1482	cell wall glycoprotein biosynthetic process
SSUSC84_RS07590	COG3091	SprT-like family
SSUSC84_RS07600	COG0656	L-ascorbic acid biosynthetic process
SSUSC84_RS07605	COG4708	membrane
SSUSC84_RS07610	COG2246	polysaccharide biosynthetic process
SSUSC84_RS07620	COG0024	Methionine aminopeptidase
SSUSC84_RS07630	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SSUSC84_RS07635	COG2249	NAD(P)H dehydrogenase (quinone) activity
SSUSC84_RS07640	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
SSUSC84_RS07645	COG2131	deaminase
SSUSC84_RS07655	COG1363	Peptidase, m42
SSUSC84_RS07670	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SSUSC84_RS07675	COG1956	GAF domain-containing protein
SSUSC84_RS07685	COG1695	Transcriptional regulator
SSUSC84_RS07700	COG0513	Belongs to the DEAD box helicase family
SSUSC84_RS07705	COG0726	polysaccharide deacetylase
SSUSC84_RS07725	COG0183	Belongs to the thiolase family
SSUSC84_RS07730	COG3425	synthase
SSUSC84_RS07755	COG0776	regulation of translation
SSUSC84_RS07765	COG2755	lipolytic protein G-D-S-L family
SSUSC84_RS07770	COG1307	EDD domain protein, DegV family
SSUSC84_RS07775	COG0497	DNA recombination
SSUSC84_RS07780	COG1438	arginine binding
SSUSC84_RS07785	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SSUSC84_RS07795	COG1722	exodeoxyribonuclease VII activity
SSUSC84_RS07800	COG1570	exodeoxyribonuclease VII activity
SSUSC84_RS07805	COG2321	neutral zinc metallopeptidase
SSUSC84_RS07810	COG1755	Isoprenylcysteine carboxyl methyltransferase
SSUSC84_RS07815	COG5002	protein histidine kinase activity
SSUSC84_RS07820	COG0745	RESPONSE REGULATOR receiver
SSUSC84_RS07845	COG1227	inorganic diphosphatase activity
SSUSC84_RS07855	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SSUSC84_RS07860	COG1253	flavin adenine dinucleotide binding
SSUSC84_RS07865	COG1119	ATPase activity
SSUSC84_RS07870	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SSUSC84_RS07880	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SSUSC84_RS07885	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SSUSC84_RS07900	COG4470	Protein conserved in bacteria
SSUSC84_RS07905	COG3480	Lon protease (S16) C-terminal proteolytic domain
SSUSC84_RS07910	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SSUSC84_RS07915	COG0742	ribosomal rna small subunit methyltransferase
SSUSC84_RS07925	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SSUSC84_RS07930	COG4483	Protein conserved in bacteria
SSUSC84_RS07935	COG2197	response regulator
SSUSC84_RS07940	COG2203	Gaf domain
SSUSC84_RS07940	COG4585	Histidine kinase
SSUSC84_RS07945	COG0842	Transport permease protein
SSUSC84_RS07950	COG1131	(ABC) transporter
SSUSC84_RS07965	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SSUSC84_RS07980	COG0671	phosphoesterase, PA-phosphatase related
SSUSC84_RS07985	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SSUSC84_RS08000	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
SSUSC84_RS08005	COG1187	pseudouridine synthase activity
SSUSC84_RS08010	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
SSUSC84_RS08015	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
SSUSC84_RS08020	COG0582	viral genome integration into host DNA
SSUSC84_RS08040	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SSUSC84_RS08045	COG3763	UPF0154 protein
SSUSC84_RS08055	COG3579	cysteine-type endopeptidase activity
SSUSC84_RS08070	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SSUSC84_RS08075	COG1254	Belongs to the acylphosphatase family
SSUSC84_RS08085	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SSUSC84_RS08090	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SSUSC84_RS08100	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SSUSC84_RS08110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SSUSC84_RS08125	COG1160	GTP binding
SSUSC84_RS08135	COG1484	DNA-dependent DNA replication
SSUSC84_RS08145	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SSUSC84_RS08150	COG0628	permease
SSUSC84_RS08155	COG0745	RESPONSE REGULATOR receiver
SSUSC84_RS08160	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SSUSC84_RS08170	COG0492	ferredoxin-NADP+ reductase activity
SSUSC84_RS08180	COG0513	Belongs to the DEAD box helicase family
SSUSC84_RS08190	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SSUSC84_RS08195	COG0768	penicillin binding
SSUSC84_RS08205	COG0275	rRNA processing
SSUSC84_RS08255	COG4939	FMN-binding domain protein
SSUSC84_RS08260	COG0142	geranyltranstransferase activity
SSUSC84_RS08265	COG1252	NADH dehydrogenase
SSUSC84_RS08275	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SSUSC84_RS08280	COG0569	domain protein
SSUSC84_RS08285	COG0534	Mate efflux family protein
SSUSC84_RS08295	COG4224	UPF0291 protein
SSUSC84_RS08300	COG0751	glycine-tRNA ligase activity
SSUSC84_RS08325	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SSUSC84_RS08330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SSUSC84_RS08335	COG1464	Belongs to the NlpA lipoprotein family
SSUSC84_RS08340	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SSUSC84_RS08345	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SSUSC84_RS08350	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SSUSC84_RS08355	COG2252	PERMEase
SSUSC84_RS08360	COG0561	phosphatase activity
SSUSC84_RS08370	COG3715	PTS system
SSUSC84_RS08375	COG3716	PTS system mannose fructose sorbose family IID component
SSUSC84_RS08400	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
SSUSC84_RS08445	COG0439	Biotin carboxylase
SSUSC84_RS08465	COG1028	Short-chain dehydrogenase reductase Sdr
SSUSC84_RS08470	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SSUSC84_RS08475	COG2070	2-Nitropropane dioxygenase
SSUSC84_RS08485	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SSUSC84_RS08495	COG1024	Enoyl-CoA hydratase
SSUSC84_RS08500	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SSUSC84_RS08505	COG0527	aspartate kinase activity
SSUSC84_RS08515	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SSUSC84_RS08520	COG0736	holo-[acyl-carrier-protein] synthase activity
SSUSC84_RS08525	COG0653	protein targeting
SSUSC84_RS08535	COG1940	carbohydrate kinase activity
SSUSC84_RS08540	COG1263	PTS System
SSUSC84_RS08540	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS08540	COG2190	(PTS) system
SSUSC84_RS08545	COG1621	beta-fructofuranosidase activity
SSUSC84_RS08550	COG1609	Transcriptional regulator
SSUSC84_RS08555	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SSUSC84_RS08570	COG0006	proline dipeptidase activity
SSUSC84_RS08575	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SSUSC84_RS08595	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SSUSC84_RS08600	COG0629	single-stranded DNA binding
SSUSC84_RS08610	COG2826	transposase and inactivated derivatives, IS30 family
SSUSC84_RS08615	COG0095	Lipoate-protein ligase
SSUSC84_RS08630	COG0508	dehydrogenase complex catalyzes the overall conversion of
SSUSC84_RS08635	COG0508	dehydrogenase complex catalyzes the overall conversion of
SSUSC84_RS08635	COG0022	dehydrogenase e1 component
SSUSC84_RS08640	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SSUSC84_RS08645	COG2860	membrane
SSUSC84_RS08660	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SSUSC84_RS08665	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
SSUSC84_RS08675	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SSUSC84_RS08680	COG0195	Participates in both transcription termination and antitermination
SSUSC84_RS08690	COG0220	tRNA (guanine-N7-)-methyltransferase activity
SSUSC84_RS08700	COG4473	ABC transporter
SSUSC84_RS08705	COG1131	(ABC) transporter
SSUSC84_RS08710	COG0537	adenosine 5'-monophosphoramidase activity
SSUSC84_RS08720	COG1316	TRANSCRIPTIONal
SSUSC84_RS08730	COG0802	atpase or kinase
SSUSC84_RS08735	COG1461	Dihydroxyacetone kinase
SSUSC84_RS08750	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SSUSC84_RS08755	COG0601	transmembrane transport
SSUSC84_RS08760	COG4608	Belongs to the ABC transporter superfamily
SSUSC84_RS08775	COG1686	Belongs to the peptidase S11 family
SSUSC84_RS08790	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SSUSC84_RS08795	COG0719	Fe-S assembly protein
SSUSC84_RS08805	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SSUSC84_RS08810	COG4862	establishment of competence for transformation
SSUSC84_RS08815	COG1968	undecaprenyl-diphosphatase activity
SSUSC84_RS08820	COG0765	amino acid transport
SSUSC84_RS08840	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SSUSC84_RS08845	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
SSUSC84_RS08850	COG0440	acetolactate synthase activity
SSUSC84_RS08855	COG0028	Belongs to the TPP enzyme family
SSUSC84_RS08875	COG0129	dihydroxy-acid dehydratase activity
SSUSC84_RS08885	COG2151	metal-sulfur cluster biosynthetic enzyme
SSUSC84_RS08905	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SSUSC84_RS08920	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SSUSC84_RS08945	COG3842	ATPase activity
SSUSC84_RS08955	COG4753	response regulator
SSUSC84_RS08955	COG2207	Transcriptional regulator
SSUSC84_RS08960	COG2972	Histidine kinase
SSUSC84_RS08975	COG1653	transport
SSUSC84_RS08980	COG0395	ABC-type sugar transport system, permease component
SSUSC84_RS08985	COG1175	transmembrane transport
SSUSC84_RS09000	COG0383	alpha-mannosidase activity
SSUSC84_RS09020	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SSUSC84_RS09040	COG1045	serine acetyltransferase
SSUSC84_RS09045	COG1185	polyribonucleotide nucleotidyltransferase activity
SSUSC84_RS09060	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SSUSC84_RS09060	COG1263	PTS System
SSUSC84_RS09070	COG1737	Transcriptional regulator
SSUSC84_RS09075	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
SSUSC84_RS09095	COG1187	pseudouridine synthase activity
SSUSC84_RS09115	COG0242	peptide deformylase activity
SSUSC84_RS09125	COG0066	3-isopropylmalate dehydratase activity
SSUSC84_RS09150	COG2309	aminopeptidase activity
SSUSC84_RS09165	COG2176	DNA-directed DNA polymerase activity
SSUSC84_RS09170	COG2376	Dihydroxyacetone kinase
SSUSC84_RS09180	COG2376	Dihydroxyacetone kinase
SSUSC84_RS09185	COG1461	Dihydroxyacetone kinase
SSUSC84_RS09190	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SSUSC84_RS09195	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SSUSC84_RS09200	COG0442	prolyl-tRNA aminoacylation
SSUSC84_RS09210	COG4589	Belongs to the CDS family
SSUSC84_RS09215	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SSUSC84_RS09220	COG1862	Preprotein translocase
SSUSC84_RS09230	COG1181	Belongs to the D-alanine--D-alanine ligase family
SSUSC84_RS09230	COG2918	glutathione biosynthetic process
SSUSC84_RS09240	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
SSUSC84_RS09245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SSUSC84_RS09260	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SSUSC84_RS09270	COG4463	regulation of RNA biosynthetic process
SSUSC84_RS09285	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
SSUSC84_RS09320	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SSUSC84_RS09325	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SSUSC84_RS09330	COG0492	ferredoxin-NADP+ reductase activity
SSUSC84_RS09335	COG0564	pseudouridine synthase activity
SSUSC84_RS09340	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SSUSC84_RS09360	COG1564	THIamine pyrophosphokinase
SSUSC84_RS09370	COG1162	GTPase activity
SSUSC84_RS09420	COG4115	mRNA cleavage
SSUSC84_RS09455	COG0084	hydrolase, TatD family'
SSUSC84_RS09465	COG1847	R3H domain protein
SSUSC84_RS09475	COG0594	ribonuclease P activity
SSUSC84_RS09480	COG0165	Argininosuccinate lyase
SSUSC84_RS09485	COG0137	argininosuccinate synthase activity
SSUSC84_RS09495	COG1827	regulation of RNA biosynthetic process
SSUSC84_RS09510	COG2040	homocysteine
SSUSC84_RS09515	COG0833	amino acid
SSUSC84_RS09560	COG0756	dUTP diphosphatase activity
SSUSC84_RS09565	COG1132	(ABC) transporter
SSUSC84_RS09570	COG1132	(ABC) transporter
SSUSC84_RS09580	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
SSUSC84_RS09585	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SSUSC84_RS09590	COG0705	Rhomboid family
SSUSC84_RS09595	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SSUSC84_RS09600	COG1473	amidohydrolase
SSUSC84_RS09605	COG2171	N-acyltransferase activity
SSUSC84_RS09620	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SSUSC84_RS09640	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SSUSC84_RS09665	COG3623	hexulose-6-phosphate isomerase
SSUSC84_RS09690	COG1523	belongs to the glycosyl hydrolase 13 family
SSUSC84_RS09695	COG1609	Transcriptional regulator
SSUSC84_RS09700	COG1126	abc transporter atp-binding protein
SSUSC84_RS09705	COG0765	amino acid transport
SSUSC84_RS09710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SSUSC84_RS09715	COG3942	CHAP domain
SSUSC84_RS09720	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SSUSC84_RS09730	COG1447	Phosphotransferase system cellobiose-specific component IIA
SSUSC84_RS09740	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SSUSC84_RS09740	COG3711	transcriptional antiterminator
SSUSC84_RS09750	COG2723	6-phospho-beta-galactosidase activity
SSUSC84_RS09755	COG1486	melibiose metabolic process
SSUSC84_RS09765	COG3590	peptidase
SSUSC84_RS09770	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUSC84_RS09775	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SSUSC84_RS09775	COG1321	iron dependent repressor
SSUSC84_RS09780	COG1121	(ABC) transporter
SSUSC84_RS09790	COG0803	Belongs to the bacterial solute-binding protein 9 family
SSUSC84_RS09825	COG1490	D-aminoacyl-tRNA deacylase activity
SSUSC84_RS09835	COG0737	Belongs to the 5'-nucleotidase family
SSUSC84_RS09890	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SSUSC84_RS09915	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SSUSC84_RS09940	COG0737	Belongs to the 5'-nucleotidase family
SSUSC84_RS09950	COG1328	CTP reductase activity
SSUSC84_RS09980	COG1438	arginine binding
SSUSC84_RS09985	COG0018	arginyl-trna synthetase
SSUSC84_RS10005	COG1640	4-alpha-glucanotransferase
SSUSC84_RS10010	COG2182	Extracellular solute-binding protein
SSUSC84_RS10015	COG1175	transmembrane transport
SSUSC84_RS10020	COG3833	ABC-type maltose transport systems, permease component
SSUSC84_RS10025	COG5521	maltodextrose utilization protein MalA
SSUSC84_RS10030	COG1609	Transcriptional regulator
SSUSC84_RS10035	COG1523	belongs to the glycosyl hydrolase 13 family
SSUSC84_RS10040	COG1780	Probably involved in ribonucleotide reductase function
SSUSC84_RS10045	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUSC84_RS10050	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SSUSC84_RS10055	COG2153	protein acetylation
SSUSC84_RS10060	COG4989	oxidoreductase activity
SSUSC84_RS10065	COG1216	Glycosyl transferase, family 2
SSUSC84_RS10070	COG1472	Belongs to the glycosyl hydrolase 3 family
SSUSC84_RS10110	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
SSUSC84_RS10125	COG0305	Participates in initiation and elongation during chromosome replication
SSUSC84_RS10130	COG0359	binds to the 23S rRNA
SSUSC84_RS10140	COG0445	tRNA wobble uridine modification
SSUSC84_RS10155	COG1051	belongs to the nudix hydrolase family
SSUSC84_RS10160	COG1733	regulation of RNA biosynthetic process
SSUSC84_RS10170	COG0482	sulfurtransferase activity
SSUSC84_RS10175	COG1760	l-serine dehydratase
SSUSC84_RS10180	COG1760	l-serine dehydratase
SSUSC84_RS10190	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SSUSC84_RS10195	COG1122	ATPase activity
SSUSC84_RS10200	COG1122	ATPase activity
SSUSC84_RS10205	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SSUSC84_RS10210	COG1426	Protein conserved in bacteria
SSUSC84_RS10215	COG0612	Peptidase, M16
SSUSC84_RS10220	COG0612	Peptidase, M16
SSUSC84_RS10230	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
SSUSC84_RS10235	COG0517	IMP dehydrogenase activity
SSUSC84_RS10235	COG0516	GMP reductase activity
SSUSC84_RS10245	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SSUSC84_RS10250	COG0488	(ABC) transporter
SSUSC84_RS10280	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
SSUSC84_RS10285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SSUSC84_RS10290	COG1475	DNA binding