SSU12_RS00005 PF00308 Bacterial dnaA protein SSU12_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SSU12_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SSU12_RS00010 PF02767 DNA polymerase III beta subunit, central domain SSU12_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SSU12_RS00015 PF00609 SSU12_RS00015 SSU12_RS00015 PF00781 Diacylglycerol kinase catalytic domain SSU12_RS00020 PF06107 SSU12_RS00020 SSU12_RS00025 PF01381 Helix-turn-helix SSU12_RS00030 PF01926 50S ribosome-binding GTPase SSU12_RS00030 PF06071 Protein of unknown function (DUF933) SSU12_RS00035 PF01195 Peptidyl-tRNA hydrolase SSU12_RS00040 PF00270 DEAD/DEAH box helicase SSU12_RS00040 PF00271 Helicase conserved C-terminal domain SSU12_RS00040 PF02559 CarD-like/TRCF domain SSU12_RS00040 PF03461 TRCF domain SSU12_RS00045 PF01479 S4 domain SSU12_RS00050 PF04977 Septum formation initiator SSU12_RS00060 PF13354 Beta-lactamase enzyme family SSU12_RS00065 PF01171 PP-loop family SSU12_RS00070 PF00156 Phosphoribosyl transferase domain SSU12_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) SSU12_RS00075 PF01434 Peptidase family M41 SSU12_RS00075 PF06480 FtsH Extracellular SSU12_RS00185 PF04085 rod shape-determining protein MreC SSU12_RS00190 PF04093 SSU12_RS00190 SSU12_RS00195 PF05257 CHAP domain SSU12_RS00200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSU12_RS00200 PF14572 Phosphoribosyl synthetase-associated domain SSU12_RS00205 PF00155 Aminotransferase class I and II SSU12_RS00210 PF02565 Recombination protein O C terminal SSU12_RS00210 PF11967 Recombination protein O N terminal SSU12_RS00215 PF02504 Fatty acid synthesis protein SSU12_RS00220 PF00550 Phosphopantetheine attachment site SSU12_RS00225 PF01259 SAICAR synthetase SSU12_RS00230 PF02769 AIR synthase related protein, C-terminal domain SSU12_RS00230 PF13507 CobB/CobQ-like glutamine amidotransferase domain SSU12_RS00235 PF00156 Phosphoribosyl transferase domain SSU12_RS00235 PF13537 Glutamine amidotransferase domain SSU12_RS00240 PF00586 AIR synthase related protein, N-terminal domain SSU12_RS00240 PF02769 AIR synthase related protein, C-terminal domain SSU12_RS00245 PF00551 Formyl transferase SSU12_RS00250 PF01808 AICARFT/IMPCHase bienzyme SSU12_RS00250 PF02142 MGS-like domain SSU12_RS00255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSU12_RS00255 PF02843 Phosphoribosylglycinamide synthetase, C domain SSU12_RS00255 PF02844 Phosphoribosylglycinamide synthetase, N domain SSU12_RS00260 PF00731 AIR carboxylase SSU12_RS00265 PF02222 ATP-grasp domain SSU12_RS00280 PF00206 Lyase SSU12_RS00280 PF10397 Adenylosuccinate lyase C-terminus SSU12_RS00290 PF02517 CAAX protease self-immunity SSU12_RS00300 PF00005 ABC transporter SSU12_RS00310 PF00005 ABC transporter SSU12_RS00310 PF00664 ABC transporter transmembrane region SSU12_RS00315 PF05491 Holliday junction DNA helicase ruvB C-terminus SSU12_RS00315 PF05496 Holliday junction DNA helicase ruvB N-terminus SSU12_RS00320 PF12746 GNAT acetyltransferase SSU12_RS00325 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS00330 PF13560 Helix-turn-helix domain SSU12_RS00335 PF01548 SSU12_RS00335 SSU12_RS00335 PF02371 SSU12_RS00335 SSU12_RS00345 PF01609 Transposase DDE domain SSU12_RS00350 PF08245 Mur ligase middle domain SSU12_RS00365 PF01119 DNA mismatch repair protein, C-terminal domain SSU12_RS00365 PF08676 MutL C terminal dimerisation domain SSU12_RS00365 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS00370 PF01330 RuvA N terminal domain SSU12_RS00370 PF07499 RuvA, C-terminal domain SSU12_RS00370 PF14520 Helix-hairpin-helix domain SSU12_RS00380 PF03352 Methyladenine glycosylase SSU12_RS00385 PF00994 Probable molybdopterin binding domain SSU12_RS00385 PF02464 Competence-damaged protein SSU12_RS00390 PF00154 recA bacterial DNA recombination protein SSU12_RS00395 PF03960 ArsC family SSU12_RS00400 PF06135 SSU12_RS00400 SSU12_RS00405 PF03652 Uncharacterised protein family (UPF0081) SSU12_RS00410 PF06949 SSU12_RS00410 SSU12_RS00415 PF06042 Bacterial protein of unknown function (DUF925) SSU12_RS00425 PF00338 Ribosomal protein S10p/S20e SSU12_RS00430 PF00297 Ribosomal protein L3 SSU12_RS00435 PF00573 Ribosomal protein L4/L1 family SSU12_RS00440 PF00276 Ribosomal protein L23 SSU12_RS00445 PF00181 Ribosomal Proteins L2, RNA binding domain SSU12_RS00445 PF03947 Ribosomal Proteins L2, C-terminal domain SSU12_RS00450 PF00203 Ribosomal protein S19 SSU12_RS00455 PF00237 Ribosomal protein L22p/L17e SSU12_RS00460 PF00189 Ribosomal protein S3, C-terminal domain SSU12_RS00460 PF07650 KH domain SSU12_RS00465 PF00252 Ribosomal protein L16p/L10e SSU12_RS00470 PF00831 Ribosomal L29 protein SSU12_RS00475 PF00366 Ribosomal protein S17 SSU12_RS00480 PF00238 Ribosomal protein L14p/L23e SSU12_RS00485 PF00467 KOW motif SSU12_RS00485 PF17136 SSU12_RS00485 SSU12_RS00490 PF00281 Ribosomal protein L5 SSU12_RS00490 PF00673 ribosomal L5P family C-terminus SSU12_RS00495 PF00253 Ribosomal protein S14p/S29e SSU12_RS00505 PF00410 Ribosomal protein S8 SSU12_RS00515 PF00347 Ribosomal protein L6 SSU12_RS00520 PF00861 Ribosomal L18p/L5e family SSU12_RS00525 PF00333 Ribosomal protein S5, N-terminal domain SSU12_RS00525 PF03719 Ribosomal protein S5, C-terminal domain SSU12_RS00530 PF00327 Ribosomal protein L30p/L7e SSU12_RS00535 PF00828 Ribosomal protein L18e/L15 SSU12_RS00540 PF00344 SecY translocase SSU12_RS00545 PF00406 Adenylate kinase SSU12_RS00550 PF01176 Translation initiation factor 1A / IF-1 SSU12_RS00555 PF00444 Ribosomal protein L36 SSU12_RS00560 PF00416 Ribosomal protein S13/S18 SSU12_RS00565 PF00411 Ribosomal protein S11 SSU12_RS00570 PF01000 RNA polymerase Rpb3/RpoA insert domain SSU12_RS00570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SSU12_RS00570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SSU12_RS00575 PF01196 Ribosomal protein L17 SSU12_RS00660 PF00589 Phage integrase family SSU12_RS00660 PF14657 SSU12_RS00660 SSU12_RS00660 PF14659 Phage integrase, N-terminal SAM-like domain SSU12_RS00665 PF11372 SSU12_RS00665 SSU12_RS00670 PF02486 SSU12_RS00670 SSU12_RS00680 PF01580 FtsK/SpoIIIE family SSU12_RS00700 PF11185 SSU12_RS00700 SSU12_RS00710 PF13463 Winged helix DNA-binding domain SSU12_RS00715 PF00005 ABC transporter SSU12_RS00720 PF00950 SSU12_RS00720 SSU12_RS00725 PF01297 Periplasmic solute binding protein family SSU12_RS00725 PF09223 YodA lipocalin-like domain SSU12_RS00730 PF03965 Penicillinase repressor SSU12_RS00740 PF00403 Heavy-metal-associated domain SSU12_RS00745 PF01230 HIT domain SSU12_RS00750 PF00579 tRNA synthetases class I (W and Y) SSU12_RS00750 PF01479 S4 domain SSU12_RS00755 PF00905 Penicillin binding protein transpeptidase domain SSU12_RS00755 PF00912 Transglycosylase SSU12_RS00760 PF00562 RNA polymerase Rpb2, domain 6 SSU12_RS00760 PF04560 RNA polymerase Rpb2, domain 7 SSU12_RS00760 PF04561 RNA polymerase Rpb2, domain 2 SSU12_RS00760 PF04563 RNA polymerase beta subunit SSU12_RS00760 PF04565 RNA polymerase Rpb2, domain 3 SSU12_RS00760 PF10385 RNA polymerase beta subunit external 1 domain SSU12_RS00765 PF00623 RNA polymerase Rpb1, domain 2 SSU12_RS00765 PF04983 RNA polymerase Rpb1, domain 3 SSU12_RS00765 PF04997 RNA polymerase Rpb1, domain 1 SSU12_RS00765 PF04998 RNA polymerase Rpb1, domain 5 SSU12_RS00765 PF05000 RNA polymerase Rpb1, domain 4 SSU12_RS00770 PF06279 SSU12_RS00770 SSU12_RS00780 PF00437 Type II/IV secretion system protein SSU12_RS00785 PF00482 Type II secretion system (T2SS), protein F SSU12_RS00790 PF13544 SSU12_RS00790 SSU12_RS00800 PF11773 SSU12_RS00800 SSU12_RS00805 PF15980 SSU12_RS00805 SSU12_RS00815 PF02384 N-6 DNA Methylase SSU12_RS00820 PF00871 Acetokinase family SSU12_RS00825 PF07155 ECF-type riboflavin transporter, S component SSU12_RS00830 PF08245 Mur ligase middle domain SSU12_RS00835 PF05343 M42 glutamyl aminopeptidase SSU12_RS00840 PF15513 Domain of unknown function (DUF4651) SSU12_RS00845 PF00085 Thioredoxin SSU12_RS00850 PF06207 SSU12_RS00850 SSU12_RS00855 PF01588 Putative tRNA binding domain SSU12_RS00855 PF14794 Domain of unknown function (DUF4479) SSU12_RS00860 PF10978 SSU12_RS00860 SSU12_RS00865 PF00436 Single-strand binding protein family SSU12_RS00875 PF00166 Chaperonin 10 Kd subunit SSU12_RS00880 PF00118 TCP-1/cpn60 chaperonin family SSU12_RS00885 PF00164 Ribosomal protein S12/S23 SSU12_RS00890 PF00177 Ribosomal protein S7p/S5e SSU12_RS00895 PF00009 Elongation factor Tu GTP binding domain SSU12_RS00895 PF00679 Elongation factor G C-terminus SSU12_RS00895 PF03144 Elongation factor Tu domain 2 SSU12_RS00895 PF03764 Elongation factor G, domain IV SSU12_RS00895 PF14492 Elongation Factor G, domain II SSU12_RS00900 PF01431 Peptidase family M13 SSU12_RS00900 PF05649 Peptidase family M13 SSU12_RS00905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SSU12_RS00905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SSU12_RS00910 PF00162 Phosphoglycerate kinase SSU12_RS00915 PF06081 SSU12_RS00915 SSU12_RS00920 PF13411 MerR HTH family regulatory protein SSU12_RS00925 PF00120 Glutamine synthetase, catalytic domain SSU12_RS00925 PF03951 Glutamine synthetase, beta-Grasp domain SSU12_RS00930 PF00753 Metallo-beta-lactamase superfamily SSU12_RS00930 PF07521 RNA-metabolising metallo-beta-lactamase SSU12_RS00935 PF07288 Protein of unknown function (DUF1447) SSU12_RS00940 PF00814 Glycoprotease family SSU12_RS00945 PF13673 Acetyltransferase (GNAT) domain SSU12_RS00950 PF00814 Glycoprotease family SSU12_RS00955 PF02311 AraC-like ligand binding domain SSU12_RS00955 PF12833 Helix-turn-helix domain SSU12_RS00960 PF01547 Bacterial extracellular solute-binding protein SSU12_RS00965 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS00975 PF02065 Melibiase SSU12_RS00975 PF16874 SSU12_RS00975 SSU12_RS00975 PF16875 SSU12_RS00975 SSU12_RS00980 PF03591 SSU12_RS00980 SSU12_RS00985 PF05437 SSU12_RS00985 SSU12_RS00990 PF03601 SSU12_RS00990 SSU12_RS00995 PF04650 SSU12_RS00995 SSU12_RS01000 PF07564 SSU12_RS01000 SSU12_RS01005 PF00746 SSU12_RS01005 SSU12_RS01015 PF00005 ABC transporter SSU12_RS01020 PF03486 HI0933-like protein SSU12_RS01025 PF00232 Glycosyl hydrolase family 1 SSU12_RS01030 PF04394 SSU12_RS01030 SSU12_RS01035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU12_RS01035 PF00874 PRD domain SSU12_RS01040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS01045 PF03611 SSU12_RS01045 SSU12_RS01050 PF00456 Transketolase, thiamine diphosphate binding domain SSU12_RS01055 PF02779 Transketolase, pyrimidine binding domain SSU12_RS01055 PF02780 Transketolase, C-terminal domain SSU12_RS01060 PF03009 Glycerophosphoryl diester phosphodiesterase family SSU12_RS01060 PF10110 SSU12_RS01060 SSU12_RS01065 PF02575 YbaB/EbfC DNA-binding family SSU12_RS01070 PF01380 SIS domain SSU12_RS01075 PF00746 SSU12_RS01075 SSU12_RS01075 PF04650 SSU12_RS01075 SSU12_RS01075 PF07501 G5 domain SSU12_RS01075 PF16828 SSU12_RS01075 SSU12_RS01080 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SSU12_RS01080 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SSU12_RS01080 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SSU12_RS01085 PF14506 CppA N-terminal SSU12_RS01085 PF14507 CppA C-terminal SSU12_RS01090 PF00144 Beta-lactamase SSU12_RS01095 PF01228 Glycine radical SSU12_RS01095 PF02901 Pyruvate formate lyase SSU12_RS01100 PF00817 impB/mucB/samB family SSU12_RS01100 PF11798 IMS family HHH motif SSU12_RS01100 PF11799 impB/mucB/samB family C-terminal domain SSU12_RS01105 PF02082 Transcriptional regulator SSU12_RS01110 PF13460 NADH(P)-binding SSU12_RS01115 PF00294 pfkB family carbohydrate kinase SSU12_RS01120 PF00730 HhH-GPD superfamily base excision DNA repair protein SSU12_RS01130 PF00480 ROK family SSU12_RS01135 PF02378 Phosphotransferase system, EIIC SSU12_RS01140 PF16126 SSU12_RS01140 SSU12_RS01145 PF13229 Right handed beta helix region SSU12_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS01160 PF00005 ABC transporter SSU12_RS01165 PF09084 NMT1/THI5 like SSU12_RS01175 PF00403 Heavy-metal-associated domain SSU12_RS01180 PF00122 E1-E2 ATPase SSU12_RS01185 PF00122 E1-E2 ATPase SSU12_RS01185 PF00702 haloacid dehalogenase-like hydrolase SSU12_RS01190 PF13538 UvrD-like helicase C-terminal domain SSU12_RS01190 PF13604 AAA domain SSU12_RS01190 PF14490 Helix-hairpin-helix containing domain SSU12_RS01195 PF00717 Peptidase S24-like SSU12_RS01200 PF01351 Ribonuclease HII SSU12_RS01200 PF11858 Domain of unknown function (DUF3378) SSU12_RS01205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SSU12_RS01210 PF01476 LysM domain SSU12_RS01215 PF00128 Alpha amylase, catalytic domain SSU12_RS01215 PF16657 SSU12_RS01215 SSU12_RS01220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU12_RS01220 PF00367 phosphotransferase system, EIIB SSU12_RS01220 PF02378 Phosphotransferase system, EIIC SSU12_RS01225 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS01225 PF07702 UTRA domain SSU12_RS01235 PF02674 SSU12_RS01235 SSU12_RS01240 PF00488 MutS domain V SSU12_RS01240 PF01713 Smr domain SSU12_RS01245 PF00583 Acetyltransferase (GNAT) family SSU12_RS01250 PF00085 Thioredoxin SSU12_RS01255 PF00501 AMP-binding enzyme SSU12_RS01260 PF01625 Peptide methionine sulfoxide reductase SSU12_RS01260 PF01641 SelR domain SSU12_RS01265 PF01381 Helix-turn-helix SSU12_RS01270 PF07242 SSU12_RS01270 SSU12_RS01275 PF07242 SSU12_RS01275 SSU12_RS01280 PF00005 ABC transporter SSU12_RS01285 PF01235 SSU12_RS01285 SSU12_RS01290 PF00924 Mechanosensitive ion channel SSU12_RS01295 PF11611 Domain of unknown function (DUF4352) SSU12_RS01305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SSU12_RS01305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SSU12_RS01310 PF01180 Dihydroorotate dehydrogenase SSU12_RS01315 PF09587 Bacterial capsule synthesis protein PGA_cap SSU12_RS01320 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS01325 PF06182 SSU12_RS01325 SSU12_RS01330 PF06182 SSU12_RS01330 SSU12_RS01335 PF00005 ABC transporter SSU12_RS01340 PF00440 Bacterial regulatory proteins, tetR family SSU12_RS01340 PF14278 SSU12_RS01340 SSU12_RS01345 PF12051 SSU12_RS01345 SSU12_RS01350 PF13349 SSU12_RS01350 SSU12_RS01355 PF08006 SSU12_RS01355 SSU12_RS01360 PF03551 Transcriptional regulator PadR-like family SSU12_RS01365 PF03788 SSU12_RS01365 SSU12_RS01370 PF04172 SSU12_RS01370 SSU12_RS01375 PF01226 Formate/nitrite transporter SSU12_RS01380 PF00230 Major intrinsic protein SSU12_RS01385 PF05872 SSU12_RS01385 SSU12_RS01390 PF00293 NUDIX domain SSU12_RS01400 PF00746 SSU12_RS01400 SSU12_RS01410 PF00746 SSU12_RS01410 SSU12_RS01415 PF00746 SSU12_RS01415 SSU12_RS01420 PF00471 Ribosomal protein L33 SSU12_RS01425 PF01783 Ribosomal L32p protein family SSU12_RS01430 PF03129 Anticodon binding domain SSU12_RS01430 PF13393 Histidyl-tRNA synthetase SSU12_RS01435 PF00107 Zinc-binding dehydrogenase SSU12_RS01435 PF08240 Alcohol dehydrogenase GroES-like domain SSU12_RS01440 PF00171 Aldehyde dehydrogenase family SSU12_RS01440 PF00465 Iron-containing alcohol dehydrogenase SSU12_RS01445 PF14821 Threonine synthase N terminus SSU12_RS01450 PF00005 ABC transporter SSU12_RS01450 PF00664 ABC transporter transmembrane region SSU12_RS01455 PF00005 ABC transporter SSU12_RS01455 PF00664 ABC transporter transmembrane region SSU12_RS01460 PF09605 SSU12_RS01460 SSU12_RS01465 PF02361 Cobalt transport protein SSU12_RS01470 PF00005 ABC transporter SSU12_RS01475 PF01554 MatE SSU12_RS01480 PF00288 GHMP kinases N terminal domain SSU12_RS01480 PF08544 GHMP kinases C terminal SSU12_RS01485 PF00288 GHMP kinases N terminal domain SSU12_RS01490 PF00288 GHMP kinases N terminal domain SSU12_RS01490 PF08544 GHMP kinases C terminal SSU12_RS01495 PF01070 FMN-dependent dehydrogenase SSU12_RS01500 PF00005 ABC transporter SSU12_RS01500 PF00664 ABC transporter transmembrane region SSU12_RS01505 PF00005 ABC transporter SSU12_RS01505 PF00664 ABC transporter transmembrane region SSU12_RS01510 PF13740 ACT domain SSU12_RS01515 PF05167 Uncharacterised ACR (DUF711) SSU12_RS01520 PF00300 Histidine phosphatase superfamily (branch 1) SSU12_RS01525 PF01628 HrcA protein C terminal domain SSU12_RS01525 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SSU12_RS01530 PF01025 GrpE SSU12_RS01535 PF00012 Hsp70 protein SSU12_RS01540 PF00226 DnaJ domain SSU12_RS01540 PF00684 DnaJ central domain SSU12_RS01540 PF01556 DnaJ C terminal domain SSU12_RS01545 PF03099 Biotin/lipoate A/B protein ligase family SSU12_RS01550 PF01425 Amidase SSU12_RS01555 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS01565 PF13443 Cro/C1-type HTH DNA-binding domain SSU12_RS01575 PF00122 E1-E2 ATPase SSU12_RS01575 PF00702 haloacid dehalogenase-like hydrolase SSU12_RS01580 PF01475 Ferric uptake regulator family SSU12_RS01585 PF01416 tRNA pseudouridine synthase SSU12_RS01590 PF08543 Phosphomethylpyrimidine kinase SSU12_RS01595 PF07155 ECF-type riboflavin transporter, S component SSU12_RS01600 PF04260 Protein of unknown function (DUF436) SSU12_RS01605 PF07081 Protein of unknown function (DUF1349) SSU12_RS01620 PF02082 Transcriptional regulator SSU12_RS01625 PF08240 Alcohol dehydrogenase GroES-like domain SSU12_RS01625 PF13602 Zinc-binding dehydrogenase SSU12_RS01630 PF00561 alpha/beta hydrolase fold SSU12_RS01635 PF00106 short chain dehydrogenase SSU12_RS01640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SSU12_RS01645 PF02082 Transcriptional regulator SSU12_RS01650 PF00440 Bacterial regulatory proteins, tetR family SSU12_RS01655 PF12740 Chlorophyllase enzyme SSU12_RS01660 PF07859 alpha/beta hydrolase fold SSU12_RS01665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SSU12_RS01665 PF05697 Bacterial trigger factor protein (TF) SSU12_RS01665 PF05698 Bacterial trigger factor protein (TF) C-terminus SSU12_RS01670 PF13632 Glycosyl transferase family group 2 SSU12_RS01675 PF01297 Periplasmic solute binding protein family SSU12_RS01680 PF04270 Streptococcal histidine triad protein SSU12_RS01685 PF05066 HB1, ASXL, restriction endonuclease HTH domain SSU12_RS01690 PF00117 Glutamine amidotransferase class-I SSU12_RS01690 PF06418 CTP synthase N-terminus SSU12_RS01700 PF01116 Fructose-bisphosphate aldolase class-II SSU12_RS01705 PF00830 Ribosomal L28 family SSU12_RS01740 PF00270 DEAD/DEAH box helicase SSU12_RS01740 PF00271 Helicase conserved C-terminal domain SSU12_RS01740 PF17191 SSU12_RS01740 SSU12_RS01745 PF00710 Asparaginase SSU12_RS01750 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS01755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SSU12_RS01760 PF00582 Universal stress protein family SSU12_RS01765 PF00155 Aminotransferase class I and II SSU12_RS01770 PF06018 CodY GAF-like domain SSU12_RS01770 PF08222 CodY helix-turn-helix domain SSU12_RS01775 PF00857 Isochorismatase family SSU12_RS01780 PF01245 Ribosomal protein L19 SSU12_RS01790 PF02686 Glu-tRNAGln amidotransferase C subunit SSU12_RS01795 PF01425 Amidase SSU12_RS01800 PF02637 GatB domain SSU12_RS01800 PF02934 GatB/GatE catalytic domain SSU12_RS01805 PF01966 HD domain SSU12_RS01805 PF13286 Phosphohydrolase-associated domain SSU12_RS01810 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS01810 PF13377 Periplasmic binding protein-like domain SSU12_RS01815 PF00288 GHMP kinases N terminal domain SSU12_RS01815 PF08544 GHMP kinases C terminal SSU12_RS01815 PF10509 Galactokinase galactose-binding signature SSU12_RS01820 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SSU12_RS01820 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SSU12_RS01825 PF00892 EamA-like transporter family SSU12_RS01830 PF03932 CutC family SSU12_RS01840 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS01845 PF01926 50S ribosome-binding GTPase SSU12_RS01850 PF01985 CRS1 / YhbY (CRM) domain SSU12_RS01855 PF01467 Cytidylyltransferase SSU12_RS01860 PF01966 HD domain SSU12_RS01870 PF00857 Isochorismatase family SSU12_RS01875 PF02410 Oligomerisation domain SSU12_RS01880 PF13649 Methyltransferase domain SSU12_RS01890 PF05636 HIGH Nucleotidyl Transferase SSU12_RS01895 PF07739 TipAS antibiotic-recognition domain SSU12_RS01895 PF13411 MerR HTH family regulatory protein SSU12_RS01900 PF00350 Dynamin family SSU12_RS01905 PF01935 Domain of unknown function DUF87 SSU12_RS01910 PF14411 SSU12_RS01910 SSU12_RS01915 PF14567 SMI1-KNR4 cell-wall SSU12_RS01920 PF01327 Polypeptide deformylase SSU12_RS01925 PF00004 ATPase family associated with various cellular activities (AAA) SSU12_RS01925 PF07724 AAA domain (Cdc48 subfamily) SSU12_RS01925 PF10431 C-terminal, D2-small domain, of ClpB protein SSU12_RS01930 PF02446 4-alpha-glucanotransferase SSU12_RS01935 PF00343 Carbohydrate phosphorylase SSU12_RS01940 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS01940 PF07702 UTRA domain SSU12_RS01945 PF03372 Endonuclease/Exonuclease/phosphatase family SSU12_RS01950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU12_RS01950 PF00367 phosphotransferase system, EIIB SSU12_RS01950 PF02378 Phosphotransferase system, EIIC SSU12_RS01955 PF11193 SSU12_RS01955 SSU12_RS01960 PF03551 Transcriptional regulator PadR-like family SSU12_RS01965 PF01709 Transcriptional regulator SSU12_RS01970 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase SSU12_RS01975 PF07155 ECF-type riboflavin transporter, S component SSU12_RS01985 PF00581 Rhodanese-like domain SSU12_RS01985 PF12368 SSU12_RS01985 SSU12_RS01995 PF00005 ABC transporter SSU12_RS01995 PF12558 SSU12_RS01995 SSU12_RS02000 PF02361 Cobalt transport protein SSU12_RS02005 PF00313 'Cold-shock' DNA-binding domain SSU12_RS02010 PF02527 rRNA small subunit methyltransferase G SSU12_RS02015 PF00905 Penicillin binding protein transpeptidase domain SSU12_RS02015 PF00912 Transglycosylase SSU12_RS02020 PF03838 Recombination protein U SSU12_RS02025 PF06908 Protein of unknown function (DUF1273) SSU12_RS02030 PF05103 DivIVA protein SSU12_RS02035 PF01170 Putative RNA methylase family UPF0020 SSU12_RS02035 PF02926 THUMP domain SSU12_RS02045 PF02664 S-Ribosylhomocysteinase (LuxS) SSU12_RS02050 PF00013 KH domain SSU12_RS02050 PF01966 HD domain SSU12_RS02050 PF12072 SSU12_RS02050 SSU12_RS02055 PF00625 Guanylate kinase SSU12_RS02060 PF01192 RNA polymerase Rpb6 SSU12_RS02065 PF00271 Helicase conserved C-terminal domain SSU12_RS02065 PF04851 Type III restriction enzyme, res subunit SSU12_RS02070 PF00551 Formyl transferase SSU12_RS02070 PF02911 Formyl transferase, C-terminal domain SSU12_RS02075 PF01029 NusB family SSU12_RS02075 PF01189 NOL1/NOP2/sun family SSU12_RS02080 PF13672 Protein phosphatase 2C SSU12_RS02085 PF00069 Protein kinase domain SSU12_RS02085 PF03793 PASTA domain SSU12_RS02090 PF09922 Cell wall-active antibiotics response protein (DUF2154) SSU12_RS02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS02095 PF07730 Histidine kinase SSU12_RS02100 PF00072 Response regulator receiver domain SSU12_RS02100 PF00196 Bacterial regulatory proteins, luxR family SSU12_RS02105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSU12_RS02105 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS02110 PF00575 S1 RNA binding domain SSU12_RS02115 PF00291 Pyridoxal-phosphate dependent enzyme SSU12_RS02120 PF01205 Uncharacterized protein family UPF0029 SSU12_RS02120 PF09186 Domain of unknown function (DUF1949) SSU12_RS02125 PF00271 Helicase conserved C-terminal domain SSU12_RS02125 PF04851 Type III restriction enzyme, res subunit SSU12_RS02135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SSU12_RS02135 PF16321 SSU12_RS02135 SSU12_RS02205 PF01938 TRAM domain SSU12_RS02205 PF05958 tRNA (Uracil-5-)-methyltransferase SSU12_RS02210 PF02631 RecX family SSU12_RS02215 PF04167 Protein of unknown function (DUF402) SSU12_RS02220 PF06124 Staphylococcal protein of unknown function (DUF960) SSU12_RS02225 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS02225 PF07702 UTRA domain SSU12_RS02230 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS02230 PF07702 UTRA domain SSU12_RS02235 PF01301 Glycosyl hydrolases family 35 SSU12_RS02240 PF03830 PTS system sorbose subfamily IIB component SSU12_RS02245 PF03609 SSU12_RS02245 SSU12_RS02250 PF03613 SSU12_RS02250 SSU12_RS02255 PF03610 PTS system fructose IIA component SSU12_RS02260 PF01263 Aldose 1-epimerase SSU12_RS02265 PF08930 Domain of unknown function (DUF1912) SSU12_RS02270 PF14520 Helix-hairpin-helix domain SSU12_RS02275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU12_RS02285 PF00133 tRNA synthetases class I (I, L, M and V) SSU12_RS02285 PF08264 Anticodon-binding domain of tRNA SSU12_RS02285 PF10458 Valyl tRNA synthetase tRNA binding arm SSU12_RS02295 PF02661 Fic/DOC family SSU12_RS02300 PF00271 Helicase conserved C-terminal domain SSU12_RS02300 PF04851 Type III restriction enzyme, res subunit SSU12_RS02310 PF01381 Helix-turn-helix SSU12_RS02310 PF06114 Domain of unknown function (DUF955) SSU12_RS02315 PF04237 YjbR SSU12_RS02320 PF03590 Aspartate-ammonia ligase SSU12_RS02325 PF00009 Elongation factor Tu GTP binding domain SSU12_RS02325 PF00679 Elongation factor G C-terminus SSU12_RS02325 PF03144 Elongation factor Tu domain 2 SSU12_RS02330 PF11364 SSU12_RS02330 SSU12_RS02340 PF00717 Peptidase S24-like SSU12_RS02350 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) SSU12_RS02355 PF00746 SSU12_RS02355 SSU12_RS02355 PF05738 Cna protein B-type domain SSU12_RS02360 PF04203 Sortase family SSU12_RS02365 PF02875 Mur ligase family, glutamate ligase domain SSU12_RS02365 PF08245 Mur ligase middle domain SSU12_RS02370 PF03033 Glycosyltransferase family 28 N-terminal domain SSU12_RS02370 PF04101 Glycosyltransferase family 28 C-terminal domain SSU12_RS02375 PF08478 POTRA domain, FtsQ-type SSU12_RS02380 PF02491 SHS2 domain inserted in FTSA SSU12_RS02380 PF11983 SSU12_RS02380 SSU12_RS02380 PF14450 Cell division protein FtsA SSU12_RS02385 PF00091 Tubulin/FtsZ family, GTPase domain SSU12_RS02385 PF12327 FtsZ family, C-terminal domain SSU12_RS02390 PF01168 Alanine racemase, N-terminal domain SSU12_RS02395 PF04472 Protein of unknown function (DUF552) SSU12_RS02400 PF02325 SSU12_RS02400 SSU12_RS02405 PF01479 S4 domain SSU12_RS02410 PF05103 DivIVA protein SSU12_RS02415 PF00583 Acetyltransferase (GNAT) family SSU12_RS02420 PF00133 tRNA synthetases class I (I, L, M and V) SSU12_RS02420 PF06827 Zinc finger found in FPG and IleRS SSU12_RS02420 PF08264 Anticodon-binding domain of tRNA SSU12_RS02425 PF08860 Domain of unknown function (DUF1827) SSU12_RS02430 PF00293 NUDIX domain SSU12_RS02435 PF00004 ATPase family associated with various cellular activities (AAA) SSU12_RS02435 PF02151 UvrB/uvrC motif SSU12_RS02435 PF07724 AAA domain (Cdc48 subfamily) SSU12_RS02435 PF10431 C-terminal, D2-small domain, of ClpB protein SSU12_RS02440 PF08796 Protein of unknown function (DUF1797) SSU12_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS02450 PF00005 ABC transporter SSU12_RS02455 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SSU12_RS02455 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SSU12_RS02465 PF00717 Peptidase S24-like SSU12_RS02475 PF01609 Transposase DDE domain SSU12_RS02480 PF04203 Sortase family SSU12_RS02485 PF13411 MerR HTH family regulatory protein SSU12_RS02490 PF11674 SSU12_RS02490 SSU12_RS02495 PF01136 SSU12_RS02495 SSU12_RS02500 PF01136 SSU12_RS02500 SSU12_RS02500 PF16325 SSU12_RS02500 SSU12_RS02515 PF02229 Transcriptional Coactivator p15 (PC4) SSU12_RS02520 PF02632 BioY family SSU12_RS02525 PF04199 Putative cyclase SSU12_RS02530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU12_RS02530 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS02535 PF16576 SSU12_RS02535 SSU12_RS02540 PF00005 ABC transporter SSU12_RS02545 PF02687 SSU12_RS02545 SSU12_RS02545 PF12704 MacB-like periplasmic core domain SSU12_RS02550 PF00296 Luciferase-like monooxygenase SSU12_RS02560 PF00152 tRNA synthetases class II (D, K and N) SSU12_RS02560 PF01336 OB-fold nucleic acid binding domain SSU12_RS02565 PF00300 Histidine phosphatase superfamily (branch 1) SSU12_RS02570 PF04073 Aminoacyl-tRNA editing domain SSU12_RS02575 PF04018 SSU12_RS02575 SSU12_RS02580 PF09515 Thiamine transporter protein (Thia_YuaJ) SSU12_RS02585 PF01183 Glycosyl hydrolases family 25 SSU12_RS02595 PF14478 Domain of unknown function (DUF4430) SSU12_RS02600 PF01098 SSU12_RS02600 SSU12_RS02605 PF00311 Phosphoenolpyruvate carboxylase SSU12_RS02610 PF04542 Sigma-70 region 2 SSU12_RS02610 PF08281 Sigma-70, region 4 SSU12_RS02615 PF13791 SSU12_RS02615 SSU12_RS02620 PF00009 Elongation factor Tu GTP binding domain SSU12_RS02620 PF03143 Elongation factor Tu C-terminal domain SSU12_RS02620 PF03144 Elongation factor Tu domain 2 SSU12_RS02625 PF00121 Triosephosphate isomerase SSU12_RS02630 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS02635 PF01966 HD domain SSU12_RS02640 PF01925 SSU12_RS02640 SSU12_RS02645 PF09148 Domain of unknown function (DUF1934) SSU12_RS02650 PF13936 Helix-turn-helix domain SSU12_RS02655 PF00962 Adenosine/AMP deaminase SSU12_RS02665 PF00005 ABC transporter SSU12_RS02670 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS02675 PF01336 OB-fold nucleic acid binding domain SSU12_RS02675 PF02811 PHP domain SSU12_RS02675 PF07733 Bacterial DNA polymerase III alpha subunit SSU12_RS02675 PF14579 Helix-hairpin-helix motif SSU12_RS02680 PF00365 Phosphofructokinase SSU12_RS02685 PF00224 Pyruvate kinase, barrel domain SSU12_RS02685 PF02887 Pyruvate kinase, alpha/beta domain SSU12_RS02690 PF09028 Mac 1 SSU12_RS02695 PF01266 FAD dependent oxidoreductase SSU12_RS02700 PF13472 GDSL-like Lipase/Acylhydrolase family SSU12_RS02705 PF10502 Signal peptidase, peptidase S26 SSU12_RS02710 PF01380 SIS domain SSU12_RS02710 PF13522 Glutamine amidotransferase domain SSU12_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS02720 PF00005 ABC transporter SSU12_RS02725 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS02730 PF00753 Metallo-beta-lactamase superfamily SSU12_RS02735 PF00270 DEAD/DEAH box helicase SSU12_RS02735 PF00929 Exonuclease SSU12_RS02735 PF13307 Helicase C-terminal domain SSU12_RS02740 PF00696 Amino acid kinase family SSU12_RS02740 PF01472 PUA domain SSU12_RS02745 PF00171 Aldehyde dehydrogenase family SSU12_RS02750 PF03807 NADP oxidoreductase coenzyme F420-dependent SSU12_RS02750 PF14748 Pyrroline-5-carboxylate reductase dimerisation SSU12_RS02755 PF00440 Bacterial regulatory proteins, tetR family SSU12_RS02760 PF02645 Uncharacterised protein, DegV family COG1307 SSU12_RS02765 PF00155 Aminotransferase class I and II SSU12_RS02765 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS02770 PF03883 SSU12_RS02770 SSU12_RS02775 PF02916 DNA polymerase processivity factor SSU12_RS02775 PF03816 Cell envelope-related transcriptional attenuator domain SSU12_RS02780 PF02706 Chain length determinant protein SSU12_RS02785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SSU12_RS02795 PF02397 SSU12_RS02795 SSU12_RS02800 PF09314 SSU12_RS02800 SSU12_RS02805 PF00534 Glycosyl transferases group 1 SSU12_RS02805 PF13439 Glycosyltransferase Family 4 SSU12_RS02810 PF13704 SSU12_RS02810 SSU12_RS02820 PF00535 Glycosyl transferase family 2 SSU12_RS02825 PF00535 Glycosyl transferase family 2 SSU12_RS02840 PF07922 Glycosyltransferase family 52 SSU12_RS02845 PF01943 SSU12_RS02845 SSU12_RS02845 PF14667 Polysaccharide biosynthesis C-terminal domain SSU12_RS02850 PF03102 NeuB family SSU12_RS02850 PF08666 SAF domain SSU12_RS02855 PF02350 UDP-N-acetylglucosamine 2-epimerase SSU12_RS02860 PF00132 Bacterial transferase hexapeptide (six repeats) SSU12_RS02865 PF02348 Cytidylyltransferase SSU12_RS02865 PF13472 GDSL-like Lipase/Acylhydrolase family SSU12_RS02870 PF05598 SSU12_RS02870 SSU12_RS02875 PF01609 Transposase DDE domain SSU12_RS02880 PF01710 Transposase SSU12_RS02885 PF13358 DDE superfamily endonuclease SSU12_RS02895 PF05717 SSU12_RS02895 SSU12_RS02900 PF13007 SSU12_RS02900 SSU12_RS02920 PF00589 Phage integrase family SSU12_RS02925 PF00589 Phage integrase family SSU12_RS02945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU12_RS02950 PF01202 Shikimate kinase SSU12_RS02955 PF00800 Prephenate dehydratase SSU12_RS02960 PF03816 Cell envelope-related transcriptional attenuator domain SSU12_RS02965 PF05958 tRNA (Uracil-5-)-methyltransferase SSU12_RS02970 PF03275 UDP-galactopyranose mutase SSU12_RS02970 PF13450 NAD(P)-binding Rossmann-like domain SSU12_RS02975 PF03358 NADPH-dependent FMN reductase SSU12_RS02980 PF01047 MarR family SSU12_RS02985 PF01710 Transposase SSU12_RS02990 PF13358 DDE superfamily endonuclease SSU12_RS03000 PF00155 Aminotransferase class I and II SSU12_RS03005 PF00152 tRNA synthetases class II (D, K and N) SSU12_RS03005 PF01336 OB-fold nucleic acid binding domain SSU12_RS03015 PF05016 Plasmid stabilisation system protein SSU12_RS03020 PF01554 MatE SSU12_RS03025 PF01042 Endoribonuclease L-PSP SSU12_RS03030 PF03668 SSU12_RS03030 SSU12_RS03035 PF01933 Uncharacterised protein family UPF0052 SSU12_RS03040 PF02650 WhiA C-terminal HTH domain SSU12_RS03040 PF10298 WhiA N-terminal LAGLIDADG-like domain SSU12_RS03040 PF14527 WhiA LAGLIDADG-like domain SSU12_RS03045 PF00027 Cyclic nucleotide-binding domain SSU12_RS03045 PF13545 Crp-like helix-turn-helix domain SSU12_RS03050 PF02274 Amidinotransferase SSU12_RS03055 PF13673 Acetyltransferase (GNAT) domain SSU12_RS03060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSU12_RS03060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSU12_RS03065 PF00696 Amino acid kinase family SSU12_RS03070 PF03606 SSU12_RS03070 SSU12_RS03075 PF01546 Peptidase family M20/M25/M40 SSU12_RS03080 PF00722 Glycosyl hydrolases family 16 SSU12_RS03080 PF00728 Glycosyl hydrolase family 20, catalytic domain SSU12_RS03080 PF00754 F5/8 type C domain SSU12_RS03085 PF01316 Arginine repressor, DNA binding domain SSU12_RS03085 PF02863 Arginine repressor, C-terminal domain SSU12_RS03090 PF02547 Queuosine biosynthesis protein SSU12_RS03095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SSU12_RS03120 PF00501 AMP-binding enzyme SSU12_RS03120 PF13193 AMP-binding enzyme C-terminal domain SSU12_RS03125 PF03062 SSU12_RS03125 SSU12_RS03130 PF00550 Phosphopantetheine attachment site SSU12_RS03135 PF04914 DltD C-terminal region SSU12_RS03135 PF04915 DltD N-terminal region SSU12_RS03135 PF04918 DltD central region SSU12_RS03140 PF06772 SSU12_RS03140 SSU12_RS03145 PF13409 Glutathione S-transferase, N-terminal domain SSU12_RS03145 PF13410 Glutathione S-transferase, C-terminal domain SSU12_RS03150 PF00849 RNA pseudouridylate synthase SSU12_RS03150 PF01479 S4 domain SSU12_RS03155 PF00255 Glutathione peroxidase SSU12_RS03160 PF01032 FecCD transport family SSU12_RS03165 PF01032 FecCD transport family SSU12_RS03170 PF01497 Periplasmic binding protein SSU12_RS03175 PF00005 ABC transporter SSU12_RS03180 PF02875 Mur ligase family, glutamate ligase domain SSU12_RS03180 PF08245 Mur ligase middle domain SSU12_RS03185 PF01553 Acyltransferase SSU12_RS03190 PF10531 SLBB domain SSU12_RS03190 PF12836 Helix-hairpin-helix motif SSU12_RS03195 PF00753 Metallo-beta-lactamase superfamily SSU12_RS03195 PF03772 SSU12_RS03195 SSU12_RS03195 PF13567 SSU12_RS03195 SSU12_RS03205 PF00571 CBS domain SSU12_RS03215 PF05816 SSU12_RS03215 SSU12_RS03220 PF02588 SSU12_RS03220 SSU12_RS03220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU12_RS03225 PF02223 Thymidylate kinase SSU12_RS03230 PF13177 DNA polymerase III, delta subunit SSU12_RS03235 PF06156 SSU12_RS03235 SSU12_RS03240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SSU12_RS03245 PF00266 Aminotransferase class-V SSU12_RS03255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SSU12_RS03255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SSU12_RS03260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SSU12_RS03265 PF03960 ArsC family SSU12_RS03270 PF01545 Cation efflux family SSU12_RS03275 PF03372 Endonuclease/Exonuclease/phosphatase family SSU12_RS03285 PF13520 Amino acid permease SSU12_RS03290 PF06161 SSU12_RS03290 SSU12_RS03295 PF06161 SSU12_RS03295 SSU12_RS03300 PF02517 CAAX protease self-immunity SSU12_RS03305 PF13021 SSU12_RS03305 SSU12_RS03310 PF01555 DNA methylase SSU12_RS03315 PF01555 DNA methylase SSU12_RS03320 PF04851 Type III restriction enzyme, res subunit SSU12_RS03325 PF01797 Transposase IS200 like SSU12_RS03330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSU12_RS03330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU12_RS03330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU12_RS03330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU12_RS03335 PF12822 Protein of unknown function (DUF3816) SSU12_RS03340 PF02441 Flavoprotein SSU12_RS03345 PF04127 DNA / pantothenate metabolism flavoprotein SSU12_RS03350 PF01268 Formate--tetrahydrofolate ligase SSU12_RS03355 PF13367 SSU12_RS03355 SSU12_RS03360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU12_RS03360 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS03365 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSU12_RS03365 PF04851 Type III restriction enzyme, res subunit SSU12_RS03370 PF02384 N-6 DNA Methylase SSU12_RS03375 PF01420 Type I restriction modification DNA specificity domain SSU12_RS03390 PF16475 SSU12_RS03390 SSU12_RS03395 PF13420 Acetyltransferase (GNAT) domain SSU12_RS03405 PF08922 Domain of unknown function (DUF1905) SSU12_RS03410 PF04055 Radical SAM superfamily SSU12_RS03410 PF13353 4Fe-4S single cluster domain SSU12_RS03415 PF00455 SSU12_RS03415 SSU12_RS03415 PF08220 DeoR-like helix-turn-helix domain SSU12_RS03420 PF04198 Putative sugar-binding domain SSU12_RS03425 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU12_RS03430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS03435 PF02378 Phosphotransferase system, EIIC SSU12_RS03440 PF01228 Glycine radical SSU12_RS03440 PF02901 Pyruvate formate lyase SSU12_RS03445 PF00923 Transaldolase SSU12_RS03450 PF00465 Iron-containing alcohol dehydrogenase SSU12_RS03455 PF00465 Iron-containing alcohol dehydrogenase SSU12_RS03460 PF01118 Semialdehyde dehydrogenase, NAD binding domain SSU12_RS03460 PF02774 Semialdehyde dehydrogenase, dimerisation domain SSU12_RS03465 PF00701 Dihydrodipicolinate synthetase family SSU12_RS03470 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS03475 PF05043 Mga helix-turn-helix domain SSU12_RS03480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SSU12_RS03480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SSU12_RS03485 PF01266 FAD dependent oxidoreductase SSU12_RS03485 PF16901 SSU12_RS03485 SSU12_RS03490 PF00230 Major intrinsic protein SSU12_RS03495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU12_RS03505 PF01432 Peptidase family M3 SSU12_RS03505 PF08439 Oligopeptidase F SSU12_RS03510 PF03477 ATP cone domain SSU12_RS03515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU12_RS03515 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS03520 PF00580 UvrD/REP helicase N-terminal domain SSU12_RS03520 PF13361 UvrD-like helicase C-terminal domain SSU12_RS03525 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS03530 PF08543 Phosphomethylpyrimidine kinase SSU12_RS03535 PF02110 Hydroxyethylthiazole kinase family SSU12_RS03540 PF02581 Thiamine monophosphate synthase/TENI SSU12_RS03545 PF00027 Cyclic nucleotide-binding domain SSU12_RS03545 PF13545 Crp-like helix-turn-helix domain SSU12_RS03550 PF01048 Phosphorylase superfamily SSU12_RS03560 PF02361 Cobalt transport protein SSU12_RS03565 PF00005 ABC transporter SSU12_RS03570 PF00005 ABC transporter SSU12_RS03575 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS03580 PF02517 CAAX protease self-immunity SSU12_RS03585 PF04531 SSU12_RS03585 SSU12_RS03590 PF02557 D-alanyl-D-alanine carboxypeptidase SSU12_RS03595 PF06983 3-demethylubiquinone-9 3-methyltransferase SSU12_RS03605 PF00005 ABC transporter SSU12_RS03610 PF01541 GIY-YIG catalytic domain SSU12_RS03610 PF02151 UvrB/uvrC motif SSU12_RS03610 PF08459 UvrC Helix-hairpin-helix N-terminal SSU12_RS03615 PF13253 SSU12_RS03615 SSU12_RS03620 PF01018 GTP1/OBG SSU12_RS03620 PF01926 50S ribosome-binding GTPase SSU12_RS03620 PF09269 Domain of unknown function (DUF1967) SSU12_RS03630 PF00746 SSU12_RS03630 SSU12_RS03630 PF04650 SSU12_RS03630 SSU12_RS03630 PF06458 MucBP domain SSU12_RS03635 PF12705 PD-(D/E)XK nuclease superfamily SSU12_RS03640 PF00580 UvrD/REP helicase N-terminal domain SSU12_RS03640 PF12705 PD-(D/E)XK nuclease superfamily SSU12_RS03640 PF13361 UvrD-like helicase C-terminal domain SSU12_RS03645 PF02660 SSU12_RS03645 SSU12_RS03650 PF00204 DNA gyrase B SSU12_RS03650 PF00986 DNA gyrase B subunit, carboxyl terminus SSU12_RS03650 PF01751 Toprim domain SSU12_RS03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS03665 PF06803 SSU12_RS03665 SSU12_RS03675 PF00521 DNA gyrase/topoisomerase IV, subunit A SSU12_RS03675 PF03989 DNA gyrase C-terminal domain, beta-propeller SSU12_RS03680 PF14014 SSU12_RS03680 SSU12_RS03685 PF01063 Aminotransferase class IV SSU12_RS03690 PF11184 SSU12_RS03690 SSU12_RS03710 PF00575 S1 RNA binding domain SSU12_RS03720 PF01212 Beta-eliminating lyase SSU12_RS03735 PF00266 Aminotransferase class-V SSU12_RS03740 PF02568 Thiamine biosynthesis protein (ThiI) SSU12_RS03740 PF02926 THUMP domain SSU12_RS03745 PF05525 SSU12_RS03745 SSU12_RS03750 PF00829 Ribosomal prokaryotic L21 protein SSU12_RS03755 PF01016 Ribosomal L27 protein SSU12_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSU12_RS03765 PF03466 LysR substrate binding domain SSU12_RS03770 PF01252 SSU12_RS03770 SSU12_RS03775 PF00849 RNA pseudouridylate synthase SSU12_RS03775 PF01479 S4 domain SSU12_RS03780 PF03831 PhnA protein SSU12_RS03780 PF08274 PhnA Zinc-Ribbon SSU12_RS03790 PF00156 Phosphoribosyl transferase domain SSU12_RS03795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SSU12_RS03795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SSU12_RS03800 PF00117 Glutamine amidotransferase class-I SSU12_RS03800 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SSU12_RS03805 PF02142 MGS-like domain SSU12_RS03805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSU12_RS03805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SSU12_RS03810 PF04445 Putative SAM-dependent methyltransferase SSU12_RS03815 PF01470 Pyroglutamyl peptidase SSU12_RS03820 PF14131 Domain of unknown function (DUF4298) SSU12_RS03825 PF00886 Ribosomal protein S16 SSU12_RS03830 PF13083 KH domain SSU12_RS03835 PF00005 ABC transporter SSU12_RS03835 PF00664 ABC transporter transmembrane region SSU12_RS03840 PF00005 ABC transporter SSU12_RS03840 PF00664 ABC transporter transmembrane region SSU12_RS03845 PF01522 Polysaccharide deacetylase SSU12_RS03850 PF00742 Homoserine dehydrogenase SSU12_RS03850 PF03447 Homoserine dehydrogenase, NAD binding domain SSU12_RS03855 PF00288 GHMP kinases N terminal domain SSU12_RS03855 PF08544 GHMP kinases C terminal SSU12_RS03860 PF01565 FAD binding domain SSU12_RS03860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SSU12_RS03865 PF00005 ABC transporter SSU12_RS03865 PF08402 TOBE domain SSU12_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS03880 PF13416 Bacterial extracellular solute-binding protein SSU12_RS03885 PF00654 Voltage gated chloride channel SSU12_RS03885 PF02080 TrkA-C domain SSU12_RS03890 PF01548 SSU12_RS03890 SSU12_RS03895 PF00082 Subtilase family SSU12_RS03895 PF00746 SSU12_RS03895 SSU12_RS03895 PF02225 PA domain SSU12_RS03895 PF04650 SSU12_RS03895 SSU12_RS03895 PF06280 Fn3-like domain (DUF1034) SSU12_RS03895 PF07554 Uncharacterised Sugar-binding Domain SSU12_RS03900 PF01256 Carbohydrate kinase SSU12_RS03905 PF00633 Helix-hairpin-helix motif SSU12_RS03905 PF00730 HhH-GPD superfamily base excision DNA repair protein SSU12_RS03910 PF00478 IMP dehydrogenase / GMP reductase domain SSU12_RS03920 PF01782 RimM N-terminal domain SSU12_RS03920 PF05239 PRC-barrel domain SSU12_RS03925 PF01746 tRNA (Guanine-1)-methyltransferase SSU12_RS03930 PF00155 Aminotransferase class I and II SSU12_RS03935 PF00455 SSU12_RS03935 SSU12_RS03935 PF08220 DeoR-like helix-turn-helix domain SSU12_RS03940 PF00294 pfkB family carbohydrate kinase SSU12_RS03945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU12_RS03945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS03945 PF02378 Phosphotransferase system, EIIC SSU12_RS03950 PF06619 Protein of unknown function (DUF1149) SSU12_RS03955 PF02645 Uncharacterised protein, DegV family COG1307 SSU12_RS03960 PF01113 Dihydrodipicolinate reductase, N-terminus SSU12_RS03960 PF05173 Dihydrodipicolinate reductase, C-terminus SSU12_RS03965 PF01743 Poly A polymerase head domain SSU12_RS03965 PF12627 Probable RNA and SrmB- binding site of polymerase A SSU12_RS03965 PF13735 tRNA nucleotidyltransferase domain 2 putative SSU12_RS03970 PF00005 ABC transporter SSU12_RS03970 PF12848 ABC transporter SSU12_RS03970 PF16326 SSU12_RS03970 SSU12_RS03980 PF00480 ROK family SSU12_RS03995 PF00303 Thymidylate synthase SSU12_RS04000 PF00186 Dihydrofolate reductase SSU12_RS04010 PF06689 ClpX C4-type zinc finger SSU12_RS04010 PF07724 AAA domain (Cdc48 subfamily) SSU12_RS04010 PF10431 C-terminal, D2-small domain, of ClpB protein SSU12_RS04015 PF01926 50S ribosome-binding GTPase SSU12_RS04020 PF00334 Nucleoside diphosphate kinase SSU12_RS04025 PF08797 HIRAN domain SSU12_RS04030 PF00009 Elongation factor Tu GTP binding domain SSU12_RS04030 PF00679 Elongation factor G C-terminus SSU12_RS04030 PF03144 Elongation factor Tu domain 2 SSU12_RS04030 PF06421 GTP-binding protein LepA C-terminus SSU12_RS04030 PF14492 Elongation Factor G, domain II SSU12_RS04035 PF01361 Tautomerase enzyme SSU12_RS04040 PF05901 SSU12_RS04040 SSU12_RS04050 PF00265 Thymidine kinase SSU12_RS04055 PF00472 RF-1 domain SSU12_RS04055 PF03462 PCRF domain SSU12_RS04060 PF05175 Methyltransferase small domain SSU12_RS04065 PF01300 Telomere recombination SSU12_RS04070 PF00583 Acetyltransferase (GNAT) family SSU12_RS04075 PF00464 Serine hydroxymethyltransferase SSU12_RS04080 PF04245 SSU12_RS04080 SSU12_RS04085 PF13702 Lysozyme-like SSU12_RS04090 PF00106 short chain dehydrogenase SSU12_RS04100 PF08797 HIRAN domain SSU12_RS04115 PF07728 AAA domain (dynein-related subfamily) SSU12_RS04120 PF10117 SSU12_RS04120 SSU12_RS04125 PF00589 Phage integrase family SSU12_RS04130 PF11372 SSU12_RS04130 SSU12_RS04135 PF00910 RNA helicase SSU12_RS04135 PF01719 Plasmid replication protein SSU12_RS04155 PF13443 Cro/C1-type HTH DNA-binding domain SSU12_RS04185 PF00117 Glutamine amidotransferase class-I SSU12_RS04185 PF00958 GMP synthase C terminal domain SSU12_RS04185 PF02540 NAD synthase SSU12_RS04190 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS04190 PF07702 UTRA domain SSU12_RS04195 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SSU12_RS04200 PF00448 SRP54-type protein, GTPase domain SSU12_RS04200 PF02881 SRP54-type protein, helical bundle domain SSU12_RS04200 PF02978 Signal peptide binding domain SSU12_RS04205 PF16264 SSU12_RS04205 SSU12_RS04210 PF11750 SSU12_RS04210 SSU12_RS04215 PF13238 AAA domain SSU12_RS04225 PF00589 Phage integrase family SSU12_RS04225 PF13495 Phage integrase, N-terminal SAM-like domain SSU12_RS04230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU12_RS04230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU12_RS04230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU12_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS04240 PF00072 Response regulator receiver domain SSU12_RS04240 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS04245 PF05016 Plasmid stabilisation system protein SSU12_RS04255 PF02687 SSU12_RS04255 SSU12_RS04260 PF00005 ABC transporter SSU12_RS04265 PF12730 SSU12_RS04265 SSU12_RS04270 PF12730 SSU12_RS04270 SSU12_RS04275 PF00005 ABC transporter SSU12_RS04290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSU12_RS04295 PF00756 Putative esterase SSU12_RS04300 PF00756 Putative esterase SSU12_RS04305 PF06224 SSU12_RS04305 SSU12_RS04310 PF06445 GyrI-like small molecule binding domain SSU12_RS04310 PF12833 Helix-turn-helix domain SSU12_RS04315 PF01134 Glucose inhibited division protein A SSU12_RS04320 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS04325 PF00589 Phage integrase family SSU12_RS04325 PF14659 Phage integrase, N-terminal SAM-like domain SSU12_RS04330 PF11372 SSU12_RS04330 SSU12_RS04335 PF01381 Helix-turn-helix SSU12_RS04345 PF06134 L-rhamnose isomerase (RhaA) SSU12_RS04360 PF01139 tRNA-splicing ligase RtcB SSU12_RS04365 PF00535 Glycosyl transferase family 2 SSU12_RS04370 PF00391 PEP-utilising enzyme, mobile domain SSU12_RS04370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SSU12_RS04380 PF01061 SSU12_RS04380 SSU12_RS04390 PF00005 ABC transporter SSU12_RS04395 PF01381 Helix-turn-helix SSU12_RS04400 PF03432 SSU12_RS04400 SSU12_RS04400 PF11083 SSU12_RS04400 SSU12_RS04405 PF05713 SSU12_RS04405 SSU12_RS04415 PF02463 RecF/RecN/SMC N terminal domain SSU12_RS04420 PF06414 Zeta toxin SSU12_RS04425 PF01381 Helix-turn-helix SSU12_RS04445 PF13154 SSU12_RS04445 SSU12_RS04445 PF13155 Toprim-like SSU12_RS04470 PF00239 Resolvase, N terminal domain SSU12_RS04470 PF07508 Recombinase SSU12_RS04470 PF13408 Recombinase zinc beta ribbon domain SSU12_RS04470 PF14287 SSU12_RS04470 SSU12_RS04475 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SSU12_RS04480 PF07764 Omega Transcriptional Repressor SSU12_RS04485 PF08998 Bacterial epsilon antitoxin SSU12_RS04490 PF00398 Ribosomal RNA adenine dimethylase SSU12_RS04500 PF02229 Transcriptional Coactivator p15 (PC4) SSU12_RS04505 PF02195 ParB-like nuclease domain SSU12_RS04510 PF01076 Plasmid recombination enzyme SSU12_RS04515 PF13481 AAA domain SSU12_RS04525 PF04545 Sigma-70, region 4 SSU12_RS04530 PF00009 Elongation factor Tu GTP binding domain SSU12_RS04530 PF00679 Elongation factor G C-terminus SSU12_RS04530 PF03764 Elongation factor G, domain IV SSU12_RS04530 PF14492 Elongation Factor G, domain II SSU12_RS04535 PF14198 SSU12_RS04535 SSU12_RS04540 PF00176 SNF2 family N-terminal domain SSU12_RS04540 PF02384 N-6 DNA Methylase SSU12_RS04555 PF08363 Glucan-binding protein C SSU12_RS04555 PF16364 SSU12_RS04555 SSU12_RS04560 PF07751 SSU12_RS04560 SSU12_RS04565 PF05257 CHAP domain SSU12_RS04575 PF12666 SSU12_RS04575 SSU12_RS04590 PF02534 Type IV secretory system Conjugative DNA transfer SSU12_RS04600 PF02517 CAAX protease self-immunity SSU12_RS04620 PF00145 C-5 cytosine-specific DNA methylase SSU12_RS04625 PF06970 Replication initiator protein A (RepA) N-terminus SSU12_RS04635 PF00542 Ribosomal protein L7/L12 C-terminal domain SSU12_RS04635 PF16320 SSU12_RS04635 SSU12_RS04640 PF00466 Ribosomal protein L10 SSU12_RS04645 PF01131 DNA topoisomerase SSU12_RS04645 PF01396 SSU12_RS04645 SSU12_RS04645 PF01751 Toprim domain SSU12_RS04650 PF02481 DNA recombination-mediator protein A SSU12_RS04655 PF00132 Bacterial transferase hexapeptide (six repeats) SSU12_RS04655 PF12464 Maltose acetyltransferase SSU12_RS04655 PF14602 Hexapeptide repeat of succinyl-transferase SSU12_RS04660 PF02583 Metal-sensitive transcriptional repressor SSU12_RS04665 PF00581 Rhodanese-like domain SSU12_RS04670 PF00581 Rhodanese-like domain SSU12_RS04670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU12_RS04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS04675 PF08876 SSU12_RS04675 SSU12_RS04680 PF03006 SSU12_RS04680 SSU12_RS04685 PF02698 DUF218 domain SSU12_RS04690 PF01351 Ribonuclease HII SSU12_RS04695 PF01926 50S ribosome-binding GTPase SSU12_RS04700 PF03692 SSU12_RS04700 SSU12_RS04705 PF02545 Maf-like protein SSU12_RS04710 PF00746 SSU12_RS04710 SSU12_RS04710 PF02872 5'-nucleotidase, C-terminal domain SSU12_RS04715 PF01979 Amidohydrolase family SSU12_RS04720 PF03167 Uracil DNA glycosylase superfamily SSU12_RS04725 PF00535 Glycosyl transferase family 2 SSU12_RS04730 PF00156 Phosphoribosyl transferase domain SSU12_RS04735 PF00719 Inorganic pyrophosphatase SSU12_RS04740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU12_RS04745 PF01180 Dihydroorotate dehydrogenase SSU12_RS04750 PF00175 Oxidoreductase NAD-binding domain SSU12_RS04750 PF00970 Oxidoreductase FAD-binding domain SSU12_RS04750 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SSU12_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SSU12_RS04755 PF03466 LysR substrate binding domain SSU12_RS04760 PF00483 Nucleotidyl transferase SSU12_RS04765 PF00483 Nucleotidyl transferase SSU12_RS04770 PF00534 Glycosyl transferases group 1 SSU12_RS04770 PF08323 Starch synthase catalytic domain SSU12_RS04775 PF00128 Alpha amylase, catalytic domain SSU12_RS04775 PF02806 Alpha amylase, C-terminal all-beta domain SSU12_RS04775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU12_RS04780 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS04785 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS04790 PF00293 NUDIX domain SSU12_RS04795 PF00583 Acetyltransferase (GNAT) family SSU12_RS04800 PF04650 SSU12_RS04800 SSU12_RS04800 PF05342 SSU12_RS04800 SSU12_RS04800 PF07501 G5 domain SSU12_RS04800 PF07580 SSU12_RS04800 SSU12_RS04805 PF02151 UvrB/uvrC motif SSU12_RS04810 PF11185 SSU12_RS04810 SSU12_RS04815 PF00271 Helicase conserved C-terminal domain SSU12_RS04815 PF02151 UvrB/uvrC motif SSU12_RS04815 PF04851 Type III restriction enzyme, res subunit SSU12_RS04815 PF12344 Ultra-violet resistance protein B SSU12_RS04820 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS04820 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS04825 PF00005 ABC transporter SSU12_RS04830 PF13302 Acetyltransferase (GNAT) domain SSU12_RS04835 PF00005 ABC transporter SSU12_RS04840 PF01053 Cys/Met metabolism PLP-dependent enzyme SSU12_RS04855 PF01263 Aldose 1-epimerase SSU12_RS04860 PF00232 Glycosyl hydrolase family 1 SSU12_RS04865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS04865 PF02378 Phosphotransferase system, EIIC SSU12_RS04870 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU12_RS04875 PF00874 PRD domain SSU12_RS04875 PF03123 CAT RNA binding domain SSU12_RS04880 PF01791 DeoC/LacD family aldolase SSU12_RS04885 PF00294 pfkB family carbohydrate kinase SSU12_RS04895 PF02502 Ribose/Galactose Isomerase SSU12_RS04900 PF02502 Ribose/Galactose Isomerase SSU12_RS04910 PF00455 SSU12_RS04910 SSU12_RS04910 PF08220 DeoR-like helix-turn-helix domain SSU12_RS04940 PF00717 Peptidase S24-like SSU12_RS04940 PF01381 Helix-turn-helix SSU12_RS04945 PF00633 Helix-hairpin-helix motif SSU12_RS04945 PF00730 HhH-GPD superfamily base excision DNA repair protein SSU12_RS04945 PF14815 NUDIX domain SSU12_RS04950 PF03061 Thioesterase superfamily SSU12_RS04955 PF00005 ABC transporter SSU12_RS04955 PF00664 ABC transporter transmembrane region SSU12_RS04960 PF00005 ABC transporter SSU12_RS04960 PF00664 ABC transporter transmembrane region SSU12_RS04965 PF01515 Phosphate acetyl/butaryl transferase SSU12_RS04970 PF00849 RNA pseudouridylate synthase SSU12_RS04975 PF01513 ATP-NAD kinase SSU12_RS04980 PF04607 Region found in RelA / SpoT proteins SSU12_RS04985 PF01928 CYTH domain SSU12_RS04990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SSU12_RS04990 PF14572 Phosphoribosyl synthetase-associated domain SSU12_RS04995 PF00266 Aminotransferase class-V SSU12_RS05000 PF08866 Putative amino acid metabolism SSU12_RS05005 PF15507 Domain of unknown function (DUF4649) SSU12_RS05010 PF02629 CoA binding domain SSU12_RS05010 PF06971 Putative DNA-binding protein N-terminus SSU12_RS05015 PF07722 Peptidase C26 SSU12_RS05020 PF04002 RadC-like JAB domain SSU12_RS05025 PF04203 Sortase family SSU12_RS05030 PF00521 DNA gyrase/topoisomerase IV, subunit A SSU12_RS05030 PF03989 DNA gyrase C-terminal domain, beta-propeller SSU12_RS05035 PF00056 lactate/malate dehydrogenase, NAD binding domain SSU12_RS05035 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SSU12_RS05040 PF01872 RibD C-terminal domain SSU12_RS05045 PF01872 RibD C-terminal domain SSU12_RS05050 PF02653 SSU12_RS05050 SSU12_RS05055 PF02653 SSU12_RS05055 SSU12_RS05060 PF00005 ABC transporter SSU12_RS05065 PF02608 Basic membrane protein SSU12_RS05070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSU12_RS05075 PF01791 DeoC/LacD family aldolase SSU12_RS05080 PF00591 Glycosyl transferase family, a/b domain SSU12_RS05080 PF02885 Glycosyl transferase family, helical bundle domain SSU12_RS05080 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SSU12_RS05085 PF05175 Methyltransferase small domain SSU12_RS05090 PF00485 Phosphoribulokinase / Uridine kinase family SSU12_RS05095 PF01649 Ribosomal protein S20 SSU12_RS05100 PF01797 Transposase IS200 like SSU12_RS05105 PF01841 Transglutaminase-like superfamily SSU12_RS05115 PF00512 His Kinase A (phospho-acceptor) domain SSU12_RS05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS05120 PF00072 Response regulator receiver domain SSU12_RS05120 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS05135 PF01895 PhoU domain SSU12_RS05140 PF00005 ABC transporter SSU12_RS05145 PF00005 ABC transporter SSU12_RS05150 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS05160 PF12849 PBP superfamily domain SSU12_RS05165 PF01189 NOL1/NOP2/sun family SSU12_RS05165 PF13636 pre-rRNA processing and ribosome biogenesis SSU12_RS05165 PF17125 SSU12_RS05165 SSU12_RS05165 PF17126 SSU12_RS05165 SSU12_RS05170 PF00459 Inositol monophosphatase family SSU12_RS05175 PF05256 Uncharacterised protein family (UPF0223) SSU12_RS05180 PF03960 ArsC family SSU12_RS05185 PF07885 Ion channel SSU12_RS05190 PF01687 Riboflavin kinase SSU12_RS05190 PF06574 FAD synthetase SSU12_RS05195 PF01509 TruB family pseudouridylate synthase (N terminal domain) SSU12_RS05195 PF16198 SSU12_RS05195 SSU12_RS05210 PF01814 Hemerythrin HHE cation binding domain SSU12_RS05210 PF04282 SSU12_RS05210 SSU12_RS05210 PF13596 PAS domain SSU12_RS05215 PF08984 Domain of unknown function (DUF1858) SSU12_RS05225 PF01710 Transposase SSU12_RS05230 PF13358 DDE superfamily endonuclease SSU12_RS05240 PF09903 SSU12_RS05240 SSU12_RS05255 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS05260 PF01546 Peptidase family M20/M25/M40 SSU12_RS05260 PF07687 Peptidase dimerisation domain SSU12_RS05275 PF03551 Transcriptional regulator PadR-like family SSU12_RS05280 PF13349 SSU12_RS05280 SSU12_RS05285 PF08006 SSU12_RS05285 SSU12_RS05290 PF13349 SSU12_RS05290 SSU12_RS05295 PF06993 SSU12_RS05295 SSU12_RS05300 PF01047 MarR family SSU12_RS05305 PF06738 SSU12_RS05305 SSU12_RS05310 PF12821 SSU12_RS05310 SSU12_RS05315 PF01545 Cation efflux family SSU12_RS05315 PF16916 SSU12_RS05315 SSU12_RS05320 PF02447 SSU12_RS05320 SSU12_RS05325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SSU12_RS05330 PF02152 Dihydroneopterin aldolase SSU12_RS05335 PF00809 Pterin binding enzyme SSU12_RS05340 PF01227 GTP cyclohydrolase I SSU12_RS05345 PF00293 NUDIX domain SSU12_RS05350 PF16316 SSU12_RS05350 SSU12_RS05355 PF09359 VTC domain SSU12_RS05365 PF09860 SSU12_RS05365 SSU12_RS05370 PF01588 Putative tRNA binding domain SSU12_RS05370 PF03147 Ferredoxin-fold anticodon binding domain SSU12_RS05370 PF03483 B3/4 domain SSU12_RS05370 PF03484 tRNA synthetase B5 domain SSU12_RS05375 PF00583 Acetyltransferase (GNAT) family SSU12_RS05380 PF01409 tRNA synthetases class II core domain (F) SSU12_RS05380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SSU12_RS05385 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU12_RS05390 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU12_RS05395 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS05400 PF00106 short chain dehydrogenase SSU12_RS05405 PF03786 D-mannonate dehydratase (UxuA) SSU12_RS05410 PF02614 Glucuronate isomerase SSU12_RS05415 PF01081 KDPG and KHG aldolase SSU12_RS05420 PF00392 Bacterial regulatory proteins, gntR family SSU12_RS05420 PF07729 FCD domain SSU12_RS05425 PF00703 Glycosyl hydrolases family 2 SSU12_RS05425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SSU12_RS05425 PF02837 Glycosyl hydrolases family 2, sugar binding domain SSU12_RS05430 PF00294 pfkB family carbohydrate kinase SSU12_RS05435 PF13347 MFS/sugar transport protein SSU12_RS05440 PF01223 DNA/RNA non-specific endonuclease SSU12_RS05445 PF11772 SSU12_RS05445 SSU12_RS05450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU12_RS05455 PF06612 SSU12_RS05455 SSU12_RS05460 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SSU12_RS05460 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SSU12_RS05465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSU12_RS05465 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSU12_RS05470 PF00231 ATP synthase SSU12_RS05475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SSU12_RS05475 PF00306 ATP synthase alpha/beta chain, C terminal domain SSU12_RS05475 PF02874 ATP synthase alpha/beta family, beta-barrel domain SSU12_RS05480 PF00213 ATP synthase delta (OSCP) subunit SSU12_RS05485 PF00430 ATP synthase B/B' CF(0) SSU12_RS05490 PF00119 ATP synthase A chain SSU12_RS05495 PF00137 ATP synthase subunit C SSU12_RS05500 PF00781 Diacylglycerol kinase catalytic domain SSU12_RS05505 PF00533 BRCA1 C Terminus (BRCT) domain SSU12_RS05505 PF01653 NAD-dependent DNA ligase adenylation domain SSU12_RS05505 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SSU12_RS05505 PF03120 NAD-dependent DNA ligase OB-fold domain SSU12_RS05505 PF12826 Helix-hairpin-helix motif SSU12_RS05505 PF14520 Helix-hairpin-helix domain SSU12_RS05510 PF03773 SSU12_RS05510 SSU12_RS05515 PF09323 SSU12_RS05515 SSU12_RS05520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SSU12_RS05520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SSU12_RS05525 PF08713 DNA alkylation repair enzyme SSU12_RS05530 PF13302 Acetyltransferase (GNAT) domain SSU12_RS05535 PF00448 SRP54-type protein, GTPase domain SSU12_RS05535 PF02881 SRP54-type protein, helical bundle domain SSU12_RS05540 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS05545 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS05550 PF02463 RecF/RecN/SMC N terminal domain SSU12_RS05550 PF06470 SMC proteins Flexible Hinge Domain SSU12_RS05555 PF00035 Double-stranded RNA binding motif SSU12_RS05555 PF14622 Ribonuclease-III-like SSU12_RS05570 PF07690 Major Facilitator Superfamily SSU12_RS05575 PF13936 Helix-turn-helix domain SSU12_RS05580 PF08903 Domain of unknown function (DUF1846) SSU12_RS05585 PF00391 PEP-utilising enzyme, mobile domain SSU12_RS05585 PF02896 PEP-utilising enzyme, TIM barrel domain SSU12_RS05585 PF05524 PEP-utilising enzyme, N-terminal SSU12_RS05590 PF00381 PTS HPr component phosphorylation site SSU12_RS05595 PF00180 Isocitrate/isopropylmalate dehydrogenase SSU12_RS05600 PF00285 Citrate synthase SSU12_RS05605 PF00330 Aconitase family (aconitate hydratase) SSU12_RS05605 PF00694 Aconitase C-terminal domain SSU12_RS05610 PF00462 Glutaredoxin SSU12_RS05615 PF00317 Ribonucleotide reductase, all-alpha domain SSU12_RS05615 PF02867 Ribonucleotide reductase, barrel domain SSU12_RS05615 PF08343 Ribonucleotide reductase N-terminal SSU12_RS05625 PF00268 Ribonucleotide reductase, small chain SSU12_RS05630 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS05630 PF13407 Periplasmic binding protein domain SSU12_RS05635 PF07940 Heparinase II/III-like protein SSU12_RS05635 PF16889 SSU12_RS05635 SSU12_RS05640 PF00746 SSU12_RS05640 SSU12_RS05640 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SSU12_RS05645 PF02278 Polysaccharide lyase family 8, super-sandwich domain SSU12_RS05650 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SSU12_RS05655 PF04650 SSU12_RS05655 SSU12_RS05655 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SSU12_RS05660 PF02699 Preprotein translocase subunit SSU12_RS05665 PF03613 SSU12_RS05665 SSU12_RS05670 PF03609 SSU12_RS05670 SSU12_RS05675 PF03830 PTS system sorbose subfamily IIB component SSU12_RS05680 PF07470 Glycosyl Hydrolase Family 88 SSU12_RS05685 PF03610 PTS system fructose IIA component SSU12_RS05690 PF01081 KDPG and KHG aldolase SSU12_RS05695 PF00294 pfkB family carbohydrate kinase SSU12_RS05700 PF02502 Ribose/Galactose Isomerase SSU12_RS05700 PF12408 Ribose-5-phosphate isomerase SSU12_RS05705 PF13561 Enoyl-(Acyl carrier protein) reductase SSU12_RS05710 PF01548 SSU12_RS05710 SSU12_RS05710 PF02371 SSU12_RS05710 SSU12_RS05715 PF02517 CAAX protease self-immunity SSU12_RS05725 PF02517 CAAX protease self-immunity SSU12_RS05735 PF11368 SSU12_RS05735 SSU12_RS05740 PF01381 Helix-turn-helix SSU12_RS05745 PF11667 SSU12_RS05745 SSU12_RS05765 PF01411 tRNA synthetases class II (A) SSU12_RS05765 PF02272 DHHA1 domain SSU12_RS05765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSU12_RS05770 PF04525 Tubby C 2 SSU12_RS05775 PF13145 PPIC-type PPIASE domain SSU12_RS05780 PF01596 O-methyltransferase SSU12_RS05795 PF01432 Peptidase family M3 SSU12_RS05795 PF08439 Oligopeptidase F SSU12_RS05800 PF06054 SSU12_RS05800 SSU12_RS05805 PF01588 Putative tRNA binding domain SSU12_RS05805 PF09334 tRNA synthetases class I (M) SSU12_RS05810 PF07099 SSU12_RS05810 SSU12_RS05815 PF00793 DAHP synthetase I family SSU12_RS05820 PF00793 DAHP synthetase I family SSU12_RS05825 PF08501 Shikimate dehydrogenase substrate binding domain SSU12_RS05830 PF01761 3-dehydroquinate synthase SSU12_RS05835 PF00005 ABC transporter SSU12_RS05840 PF02653 SSU12_RS05840 SSU12_RS05845 PF04392 ABC transporter substrate binding protein SSU12_RS05850 PF04392 ABC transporter substrate binding protein SSU12_RS05860 PF01791 DeoC/LacD family aldolase SSU12_RS05865 PF01979 Amidohydrolase family SSU12_RS05870 PF06133 Protein of unknown function (DUF964) SSU12_RS05875 PF02153 Prephenate dehydrogenase SSU12_RS05880 PF01264 Chorismate synthase SSU12_RS05885 PF01487 Type I 3-dehydroquinase SSU12_RS05890 PF10672 S-adenosylmethionine-dependent methyltransferase SSU12_RS05895 PF00884 Sulfatase SSU12_RS05900 PF04270 Streptococcal histidine triad protein SSU12_RS05905 PF00453 Ribosomal protein L20 SSU12_RS05910 PF01632 Ribosomal protein L35 SSU12_RS05915 PF00707 Translation initiation factor IF-3, C-terminal domain SSU12_RS05915 PF05198 Translation initiation factor IF-3, N-terminal domain SSU12_RS05920 PF02224 Cytidylate kinase SSU12_RS05930 PF13370 4Fe-4S single cluster domain SSU12_RS05940 PF00535 Glycosyl transferase family 2 SSU12_RS05945 PF10066 SSU12_RS05945 SSU12_RS05950 PF00535 Glycosyl transferase family 2 SSU12_RS05955 PF00534 Glycosyl transferases group 1 SSU12_RS05955 PF13439 Glycosyltransferase Family 4 SSU12_RS05960 PF05045 SSU12_RS05960 SSU12_RS05960 PF13692 Glycosyl transferases group 1 SSU12_RS05965 PF00535 Glycosyl transferase family 2 SSU12_RS05970 PF01501 Glycosyl transferase family 8 SSU12_RS05975 PF09913 SSU12_RS05975 SSU12_RS05980 PF14667 Polysaccharide biosynthesis C-terminal domain SSU12_RS05985 PF05045 SSU12_RS05985 SSU12_RS05990 PF00005 ABC transporter SSU12_RS05995 PF01061 SSU12_RS05995 SSU12_RS06000 PF00535 Glycosyl transferase family 2 SSU12_RS06005 PF00534 Glycosyl transferases group 1 SSU12_RS06005 PF09314 SSU12_RS06005 SSU12_RS06010 PF00884 Sulfatase SSU12_RS06015 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SSU12_RS06030 PF04321 RmlD substrate binding domain SSU12_RS06035 PF16363 SSU12_RS06035 SSU12_RS06045 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SSU12_RS06050 PF00483 Nucleotidyl transferase SSU12_RS06055 PF02535 SSU12_RS06055 SSU12_RS06060 PF01784 NIF3 (NGG1p interacting factor 3) SSU12_RS06065 PF04816 Family of unknown function (DUF633) SSU12_RS06070 PF07261 Replication initiation and membrane attachment SSU12_RS06075 PF04204 Homoserine O-succinyltransferase SSU12_RS06080 PF00156 Phosphoribosyl transferase domain SSU12_RS06090 PF11311 SSU12_RS06090 SSU12_RS06095 PF01368 DHH family SSU12_RS06095 PF02272 DHHA1 domain SSU12_RS06095 PF10141 SSU12_RS06095 SSU12_RS06100 PF13091 PLD-like domain SSU12_RS06100 PF13396 SSU12_RS06100 SSU12_RS06105 PF00246 Zinc carboxypeptidase SSU12_RS06105 PF00746 SSU12_RS06105 SSU12_RS06110 PF00106 short chain dehydrogenase SSU12_RS06115 PF00753 Metallo-beta-lactamase superfamily SSU12_RS06115 PF12706 Beta-lactamase superfamily domain SSU12_RS06125 PF01926 50S ribosome-binding GTPase SSU12_RS06125 PF13167 SSU12_RS06125 SSU12_RS06125 PF16360 SSU12_RS06125 SSU12_RS06130 PF01715 IPP transferase SSU12_RS06135 PF11240 SSU12_RS06135 SSU12_RS06140 PF07690 Major Facilitator Superfamily SSU12_RS06145 PF01717 Cobalamin-independent synthase, Catalytic domain SSU12_RS06150 PF02562 PhoH-like protein SSU12_RS06155 PF06855 Protein of unknown function (DUF1250) SSU12_RS06160 PF08818 Domain of unknown function (DU1801) SSU12_RS06165 PF02558 Ketopantoate reductase PanE/ApbA SSU12_RS06165 PF08546 Ketopantoate reductase PanE/ApbA C terminal SSU12_RS06170 PF13509 S1 domain SSU12_RS06175 PF01765 Ribosome recycling factor SSU12_RS06180 PF00696 Amino acid kinase family SSU12_RS06185 PF01943 SSU12_RS06185 SSU12_RS06185 PF14667 Polysaccharide biosynthesis C-terminal domain SSU12_RS06190 PF13409 Glutathione S-transferase, N-terminal domain SSU12_RS06190 PF13410 Glutathione S-transferase, C-terminal domain SSU12_RS06200 PF00687 Ribosomal protein L1p/L10e family SSU12_RS06205 PF00298 Ribosomal protein L11, RNA binding domain SSU12_RS06205 PF03946 Ribosomal protein L11, N-terminal domain SSU12_RS06210 PF11877 SSU12_RS06210 SSU12_RS06215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU12_RS06220 PF01580 FtsK/SpoIIIE family SSU12_RS06220 PF09397 Ftsk gamma domain SSU12_RS06225 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSU12_RS06225 PF08244 Glycosyl hydrolases family 32 C terminal SSU12_RS06230 PF01547 Bacterial extracellular solute-binding protein SSU12_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS06245 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS06245 PF13377 Periplasmic binding protein-like domain SSU12_RS06255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU12_RS06260 PF10694 Protein of unknown function (DUF2500) SSU12_RS06265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SSU12_RS06270 PF01610 SSU12_RS06270 SSU12_RS06270 PF13542 SSU12_RS06270 SSU12_RS06270 PF14690 SSU12_RS06270 SSU12_RS06275 PF00009 Elongation factor Tu GTP binding domain SSU12_RS06275 PF03144 Elongation factor Tu domain 2 SSU12_RS06275 PF16658 SSU12_RS06275 SSU12_RS06280 PF00122 E1-E2 ATPase SSU12_RS06280 PF00702 haloacid dehalogenase-like hydrolase SSU12_RS06285 PF09529 SSU12_RS06285 SSU12_RS06290 PF02875 Mur ligase family, glutamate ligase domain SSU12_RS06290 PF08245 Mur ligase middle domain SSU12_RS06295 PF02566 OsmC-like protein SSU12_RS06300 PF01820 D-ala D-ala ligase N-terminus SSU12_RS06300 PF07478 D-ala D-ala ligase C-terminus SSU12_RS06305 PF02132 RecR protein SSU12_RS06305 PF13662 Toprim domain SSU12_RS06310 PF00905 Penicillin binding protein transpeptidase domain SSU12_RS06310 PF03717 Penicillin-binding Protein dimerisation domain SSU12_RS06315 PF00005 ABC transporter SSU12_RS06320 PF00005 ABC transporter SSU12_RS06320 PF12848 ABC transporter SSU12_RS06325 PF00753 Metallo-beta-lactamase superfamily SSU12_RS06330 PF00512 His Kinase A (phospho-acceptor) domain SSU12_RS06330 PF00989 PAS fold SSU12_RS06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS06335 PF00072 Response regulator receiver domain SSU12_RS06335 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS06340 PF00005 ABC transporter SSU12_RS06345 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS06350 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS06355 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS06360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU12_RS06360 PF02824 TGS domain SSU12_RS06360 PF03129 Anticodon binding domain SSU12_RS06360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SSU12_RS06375 PF00534 Glycosyl transferases group 1 SSU12_RS06375 PF13439 Glycosyltransferase Family 4 SSU12_RS06380 PF00534 Glycosyl transferases group 1 SSU12_RS06380 PF13439 Glycosyltransferase Family 4 SSU12_RS06385 PF12892 T surface-antigen of pili SSU12_RS06390 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS06390 PF13377 Periplasmic binding protein-like domain SSU12_RS06395 PF00557 Metallopeptidase family M24 SSU12_RS06395 PF01321 Creatinase/Prolidase N-terminal domain SSU12_RS06400 PF01702 Queuine tRNA-ribosyltransferase SSU12_RS06405 PF06161 SSU12_RS06405 SSU12_RS06410 PF13380 CoA binding domain SSU12_RS06420 PF00476 DNA polymerase family A SSU12_RS06420 PF01367 5'-3' exonuclease, C-terminal SAM fold SSU12_RS06420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SSU12_RS06430 PF02687 SSU12_RS06430 SSU12_RS06430 PF06696 Streptococcal surface antigen repeat SSU12_RS06435 PF00005 ABC transporter SSU12_RS06445 PF08534 Redoxin SSU12_RS06450 PF00122 E1-E2 ATPase SSU12_RS06450 PF00403 Heavy-metal-associated domain SSU12_RS06450 PF00702 haloacid dehalogenase-like hydrolase SSU12_RS06455 PF00746 SSU12_RS06455 SSU12_RS06455 PF03577 SSU12_RS06455 SSU12_RS06460 PF03848 Tellurite resistance protein TehB SSU12_RS06460 PF09313 Domain of unknown function (DUF1971) SSU12_RS06465 PF00107 Zinc-binding dehydrogenase SSU12_RS06465 PF08240 Alcohol dehydrogenase GroES-like domain SSU12_RS06470 PF01668 SmpB protein SSU12_RS06475 PF00575 S1 RNA binding domain SSU12_RS06475 PF00773 RNB domain SSU12_RS06475 PF08206 Ribonuclease B OB domain SSU12_RS06480 PF03840 Preprotein translocase SecG subunit SSU12_RS06485 PF00471 Ribosomal protein L33 SSU12_RS06490 PF07690 Major Facilitator Superfamily SSU12_RS06495 PF01121 Dephospho-CoA kinase SSU12_RS06500 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SSU12_RS06500 PF06827 Zinc finger found in FPG and IleRS SSU12_RS06500 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SSU12_RS06505 PF01926 50S ribosome-binding GTPase SSU12_RS06505 PF07650 KH domain SSU12_RS06510 PF01219 Prokaryotic diacylglycerol kinase SSU12_RS06515 PF02130 Uncharacterized protein family UPF0054 SSU12_RS06520 PF01380 SIS domain SSU12_RS06520 PF01418 Helix-turn-helix domain, rpiR family SSU12_RS06525 PF00367 phosphotransferase system, EIIB SSU12_RS06525 PF02378 Phosphotransferase system, EIIC SSU12_RS06530 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SSU12_RS06535 PF01289 Thiol-activated cytolysin SSU12_RS06540 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS06545 PF00005 ABC transporter SSU12_RS06545 PF00664 ABC transporter transmembrane region SSU12_RS06550 PF00005 ABC transporter SSU12_RS06550 PF00664 ABC transporter transmembrane region SSU12_RS06565 PF04023 FeoA domain SSU12_RS06570 PF02421 Ferrous iron transport protein B SSU12_RS06570 PF07664 SSU12_RS06570 SSU12_RS06570 PF07670 Nucleoside recognition SSU12_RS06575 PF02687 SSU12_RS06575 SSU12_RS06580 PF00005 ABC transporter SSU12_RS06585 PF00472 RF-1 domain SSU12_RS06585 PF03462 PCRF domain SSU12_RS06590 PF08331 SSU12_RS06590 SSU12_RS06590 PF13484 SSU12_RS06590 SSU12_RS06590 PF13646 HEAT repeats SSU12_RS06595 PF04892 SSU12_RS06595 SSU12_RS06600 PF05154 SSU12_RS06600 SSU12_RS06610 PF00122 E1-E2 ATPase SSU12_RS06610 PF00689 Cation transporting ATPase, C-terminus SSU12_RS06610 PF00690 Cation transporter/ATPase, N-terminus SSU12_RS06610 PF00702 haloacid dehalogenase-like hydrolase SSU12_RS06615 PF13936 Helix-turn-helix domain SSU12_RS06625 PF09335 SSU12_RS06625 SSU12_RS06645 PF01883 Domain of unknown function DUF59 SSU12_RS06650 PF00140 Sigma-70 factor, region 1 SSU12_RS06650 PF03979 Sigma-70 factor, region 1 SSU12_RS06650 PF04539 Sigma-70 region 3 SSU12_RS06650 PF04542 Sigma-70 region 2 SSU12_RS06650 PF04545 Sigma-70, region 4 SSU12_RS06655 PF01807 CHC2 zinc finger SSU12_RS06655 PF08275 DNA primase catalytic core, N-terminal domain SSU12_RS06655 PF13155 Toprim-like SSU12_RS06660 PF01741 Large-conductance mechanosensitive channel, MscL SSU12_RS06665 PF16363 SSU12_RS06665 SSU12_RS06670 PF01165 Ribosomal protein S21 SSU12_RS06675 PF07314 SSU12_RS06675 SSU12_RS06680 PF13242 HAD-hyrolase-like SSU12_RS06680 PF13344 Haloacid dehalogenase-like hydrolase SSU12_RS06685 PF00293 NUDIX domain SSU12_RS06685 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal SSU12_RS06690 PF01643 Acyl-ACP thioesterase SSU12_RS06695 PF04055 Radical SAM superfamily SSU12_RS06695 PF06969 HemN C-terminal domain SSU12_RS06705 PF00343 Carbohydrate phosphorylase SSU12_RS06710 PF01048 Phosphorylase superfamily SSU12_RS06715 PF01048 Phosphorylase superfamily SSU12_RS06720 PF03960 ArsC family SSU12_RS06725 PF01676 Metalloenzyme superfamily SSU12_RS06730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SSU12_RS06735 PF01420 Type I restriction modification DNA specificity domain SSU12_RS06740 PF01420 Type I restriction modification DNA specificity domain SSU12_RS06745 PF02384 N-6 DNA Methylase SSU12_RS06745 PF12161 HsdM N-terminal domain SSU12_RS06750 PF00271 Helicase conserved C-terminal domain SSU12_RS06750 PF04851 Type III restriction enzyme, res subunit SSU12_RS06750 PF08463 SSU12_RS06750 SSU12_RS06755 PF01926 50S ribosome-binding GTPase SSU12_RS06755 PF10396 GTP-binding protein TrmE N-terminus SSU12_RS06755 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SSU12_RS06770 PF01145 SPFH domain / Band 7 family SSU12_RS06770 PF15975 SSU12_RS06770 SSU12_RS06775 PF04011 LemA family SSU12_RS06780 PF04536 TLP18 SSU12_RS06785 PF03167 Uracil DNA glycosylase superfamily SSU12_RS06790 PF13673 Acetyltransferase (GNAT) domain SSU12_RS06795 PF01546 Peptidase family M20/M25/M40 SSU12_RS06800 PF00375 Sodium:dicarboxylate symporter family SSU12_RS06820 PF08241 Methyltransferase domain SSU12_RS06825 PF00005 ABC transporter SSU12_RS06825 PF12848 ABC transporter SSU12_RS06830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SSU12_RS06830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SSU12_RS06830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SSU12_RS06830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SSU12_RS06835 PF07949 YbbR-like protein SSU12_RS06840 PF02457 DisA bacterial checkpoint controller nucleotide-binding SSU12_RS06845 PF08245 Mur ligase middle domain SSU12_RS06845 PF08353 SSU12_RS06845 SSU12_RS06850 PF07685 CobB/CobQ-like glutamine amidotransferase domain SSU12_RS06855 PF13649 Methyltransferase domain SSU12_RS06860 PF01381 Helix-turn-helix SSU12_RS06860 PF13127 SSU12_RS06860 SSU12_RS06870 PF00005 ABC transporter SSU12_RS06870 PF12848 ABC transporter SSU12_RS06870 PF16326 SSU12_RS06870 SSU12_RS06880 PF00413 Matrixin SSU12_RS06885 PF00756 Putative esterase SSU12_RS06890 PF00753 Metallo-beta-lactamase superfamily SSU12_RS06890 PF07521 RNA-metabolising metallo-beta-lactamase SSU12_RS06900 PF04073 Aminoacyl-tRNA editing domain SSU12_RS06905 PF00005 ABC transporter SSU12_RS06910 PF02653 SSU12_RS06910 SSU12_RS06915 PF04392 ABC transporter substrate binding protein SSU12_RS06920 PF00232 Glycosyl hydrolase family 1 SSU12_RS06925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU12_RS06925 PF00367 phosphotransferase system, EIIB SSU12_RS06925 PF02378 Phosphotransferase system, EIIC SSU12_RS06930 PF00874 PRD domain SSU12_RS06930 PF03123 CAT RNA binding domain SSU12_RS06935 PF05670 SSU12_RS06935 SSU12_RS06935 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SSU12_RS06940 PF03306 Alpha-acetolactate decarboxylase SSU12_RS06945 PF13181 Tetratricopeptide repeat SSU12_RS06950 PF01594 SSU12_RS06950 SSU12_RS06955 PF10282 Lactonase, 7-bladed beta-propeller SSU12_RS06965 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS06970 PF05016 Plasmid stabilisation system protein SSU12_RS06980 PF00113 Enolase, C-terminal TIM barrel domain SSU12_RS06980 PF03952 Enolase, N-terminal domain SSU12_RS06985 PF07997 Protein of unknown function (DUF1694) SSU12_RS06990 PF02595 Glycerate kinase family SSU12_RS06995 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS07000 PF01548 SSU12_RS07000 SSU12_RS07000 PF02371 SSU12_RS07000 SSU12_RS07005 PF12710 haloacid dehalogenase-like hydrolase SSU12_RS07010 PF06160 SSU12_RS07010 SSU12_RS07015 PF00204 DNA gyrase B SSU12_RS07015 PF00986 DNA gyrase B subunit, carboxyl terminus SSU12_RS07015 PF01751 Toprim domain SSU12_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS07020 PF01965 DJ-1/PfpI family SSU12_RS07025 PF01098 SSU12_RS07025 SSU12_RS07030 PF00589 Phage integrase family SSU12_RS07040 PF03288 Poxvirus D5 protein-like SSU12_RS07040 PF08706 SSU12_RS07040 SSU12_RS07100 PF01381 Helix-turn-helix SSU12_RS07105 PF01381 Helix-turn-helix SSU12_RS07115 PF00589 Phage integrase family SSU12_RS07115 PF14657 SSU12_RS07115 SSU12_RS07115 PF14659 Phage integrase, N-terminal SAM-like domain SSU12_RS07120 PF01197 Ribosomal protein L31 SSU12_RS07125 PF02424 ApbE family SSU12_RS07130 PF01368 DHH family SSU12_RS07130 PF02272 DHHA1 domain SSU12_RS07135 PF00258 Flavodoxin SSU12_RS07140 PF00253 Ribosomal protein S14p/S29e SSU12_RS07145 PF01817 Chorismate mutase type II SSU12_RS07150 PF00654 Voltage gated chloride channel SSU12_RS07160 PF05257 CHAP domain SSU12_RS07160 PF08460 Bacterial SH3 domain SSU12_RS07165 PF09682 SSU12_RS07165 SSU12_RS07185 PF07902 SSU12_RS07185 SSU12_RS07210 PF08813 SSU12_RS07210 SSU12_RS07220 PF04883 SSU12_RS07220 SSU12_RS07225 PF05135 Phage gp6-like head-tail connector protein SSU12_RS07240 PF14265 SSU12_RS07240 SSU12_RS07260 PF04233 SSU12_RS07260 SSU12_RS07265 PF05133 Phage portal protein, SPP1 Gp6-like SSU12_RS07270 PF03237 Terminase-like family SSU12_RS07275 PF14279 SSU12_RS07275 SSU12_RS07285 PF07374 SSU12_RS07285 SSU12_RS07305 PF07116 SSU12_RS07305 SSU12_RS07310 PF07066 Lactococcus phage M3 protein SSU12_RS07330 PF00436 Single-strand binding protein family SSU12_RS07350 PF07083 SSU12_RS07350 SSU12_RS07355 PF03837 SSU12_RS07355 SSU12_RS07385 PF03374 SSU12_RS07385 SSU12_RS07385 PF08346 SSU12_RS07385 SSU12_RS07390 PF13643 SSU12_RS07390 SSU12_RS07400 PF01381 Helix-turn-helix SSU12_RS07405 PF00717 Peptidase S24-like SSU12_RS07405 PF01381 Helix-turn-helix SSU12_RS07410 PF02452 PemK-like protein SSU12_RS07415 PF00589 Phage integrase family SSU12_RS07415 PF14657 SSU12_RS07415 SSU12_RS07415 PF14659 Phage integrase, N-terminal SAM-like domain SSU12_RS07425 PF00149 Calcineurin-like phosphoesterase SSU12_RS07425 PF02872 5'-nucleotidase, C-terminal domain SSU12_RS07430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SSU12_RS07430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SSU12_RS07435 PF06144 DNA polymerase III, delta subunit SSU12_RS07445 PF02677 SSU12_RS07445 SSU12_RS07450 PF00005 ABC transporter SSU12_RS07455 PF00005 ABC transporter SSU12_RS07455 PF12399 Branched-chain amino acid ATP-binding cassette transporter SSU12_RS07460 PF02653 SSU12_RS07460 SSU12_RS07465 PF02653 SSU12_RS07465 SSU12_RS07470 PF13458 Periplasmic binding protein SSU12_RS07475 PF09902 SSU12_RS07475 SSU12_RS07480 PF00574 Clp protease SSU12_RS07485 PF14681 Uracil phosphoribosyltransferase SSU12_RS07490 PF00128 Alpha amylase, catalytic domain SSU12_RS07490 PF11941 Domain of unknown function (DUF3459) SSU12_RS07495 PF00128 Alpha amylase, catalytic domain SSU12_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS07505 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS07510 PF01547 Bacterial extracellular solute-binding protein SSU12_RS07515 PF02065 Melibiase SSU12_RS07515 PF16874 SSU12_RS07515 SSU12_RS07515 PF16875 SSU12_RS07515 SSU12_RS07520 PF02311 AraC-like ligand binding domain SSU12_RS07520 PF12833 Helix-turn-helix domain SSU12_RS07525 PF00155 Aminotransferase class I and II SSU12_RS07530 PF01053 Cys/Met metabolism PLP-dependent enzyme SSU12_RS07550 PF05175 Methyltransferase small domain SSU12_RS07555 PF01541 GIY-YIG catalytic domain SSU12_RS07560 PF07885 Ion channel SSU12_RS07565 PF02525 Flavodoxin-like fold SSU12_RS07570 PF13673 Acetyltransferase (GNAT) domain SSU12_RS07575 PF07853 SSU12_RS07575 SSU12_RS07580 PF01022 Bacterial regulatory protein, arsR family SSU12_RS07585 PF00270 DEAD/DEAH box helicase SSU12_RS07585 PF00271 Helicase conserved C-terminal domain SSU12_RS07590 PF02588 SSU12_RS07590 SSU12_RS07595 PF08000 Bacterial PH domain SSU12_RS07600 PF04270 Streptococcal histidine triad protein SSU12_RS07600 PF12799 Leucine Rich repeats (2 copies) SSU12_RS07610 PF07155 ECF-type riboflavin transporter, S component SSU12_RS07615 PF08543 Phosphomethylpyrimidine kinase SSU12_RS07620 PF01048 Phosphorylase superfamily SSU12_RS07630 PF00293 NUDIX domain SSU12_RS07635 PF00132 Bacterial transferase hexapeptide (six repeats) SSU12_RS07635 PF12804 MobA-like NTP transferase domain SSU12_RS07635 PF14602 Hexapeptide repeat of succinyl-transferase SSU12_RS07640 PF04266 ASCH domain SSU12_RS07650 PF00106 short chain dehydrogenase SSU12_RS07655 PF11195 SSU12_RS07655 SSU12_RS07665 PF03551 Transcriptional regulator PadR-like family SSU12_RS07675 PF01797 Transposase IS200 like SSU12_RS07680 PF02687 SSU12_RS07680 SSU12_RS07685 PF00005 ABC transporter SSU12_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS07695 PF00072 Response regulator receiver domain SSU12_RS07695 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS07700 PF11187 Protein of unknown function (DUF2974) SSU12_RS07705 PF00155 Aminotransferase class I and II SSU12_RS07710 PF12680 SnoaL-like domain SSU12_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS07715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SSU12_RS07720 PF00005 ABC transporter SSU12_RS07725 PF12802 MarR family SSU12_RS07730 PF12732 SSU12_RS07730 SSU12_RS07735 PF06103 SSU12_RS07735 SSU12_RS07740 PF01790 SSU12_RS07740 SSU12_RS07745 PF02603 HPr Serine kinase N terminus SSU12_RS07745 PF07475 HPr Serine kinase C-terminal domain SSU12_RS07750 PF01238 Phosphomannose isomerase type I SSU12_RS07755 PF01710 Transposase SSU12_RS07760 PF13358 DDE superfamily endonuclease SSU12_RS07765 PF04024 SSU12_RS07765 SSU12_RS07775 PF10263 SSU12_RS07775 SSU12_RS07785 PF00248 Aldo/keto reductase family SSU12_RS07790 PF06177 SSU12_RS07790 SSU12_RS07795 PF04138 SSU12_RS07795 SSU12_RS07800 PF03631 SSU12_RS07800 SSU12_RS07805 PF00557 Metallopeptidase family M24 SSU12_RS07810 PF13302 Acetyltransferase (GNAT) domain SSU12_RS07815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SSU12_RS07820 PF02525 Flavodoxin-like fold SSU12_RS07825 PF00438 S-adenosylmethionine synthetase, N-terminal domain SSU12_RS07825 PF02772 S-adenosylmethionine synthetase, central domain SSU12_RS07825 PF02773 S-adenosylmethionine synthetase, C-terminal domain SSU12_RS07830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SSU12_RS07840 PF05343 M42 glutamyl aminopeptidase SSU12_RS07845 PF02237 Biotin protein ligase C terminal domain SSU12_RS07845 PF03099 Biotin/lipoate A/B protein ligase family SSU12_RS07845 PF08279 HTH domain SSU12_RS07850 PF11676 SSU12_RS07850 SSU12_RS07855 PF12169 DNA polymerase III subunits gamma and tau domain III SSU12_RS07855 PF13177 DNA polymerase III, delta subunit SSU12_RS07860 PF13185 GAF domain SSU12_RS07865 PF06961 SSU12_RS07865 SSU12_RS07870 PF03551 Transcriptional regulator PadR-like family SSU12_RS07870 PF10400 Virulence activator alpha C-term SSU12_RS07875 PF00485 Phosphoribulokinase / Uridine kinase family SSU12_RS07885 PF00270 DEAD/DEAH box helicase SSU12_RS07885 PF00271 Helicase conserved C-terminal domain SSU12_RS07890 PF01522 Polysaccharide deacetylase SSU12_RS07895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SSU12_RS07900 PF01797 Transposase IS200 like SSU12_RS07905 PF00300 Histidine phosphatase superfamily (branch 1) SSU12_RS07910 PF00108 Thiolase, N-terminal domain SSU12_RS07910 PF02803 Thiolase, C-terminal domain SSU12_RS07915 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SSU12_RS07915 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SSU12_RS07920 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SSU12_RS07930 PF00583 Acetyltransferase (GNAT) family SSU12_RS07935 PF01548 SSU12_RS07935 SSU12_RS07935 PF02371 SSU12_RS07935 SSU12_RS07940 PF00216 Bacterial DNA-binding protein SSU12_RS07945 PF09911 SSU12_RS07945 SSU12_RS07950 PF13472 GDSL-like Lipase/Acylhydrolase family SSU12_RS07955 PF02645 Uncharacterised protein, DegV family COG1307 SSU12_RS07960 PF02463 RecF/RecN/SMC N terminal domain SSU12_RS07965 PF01316 Arginine repressor, DNA binding domain SSU12_RS07965 PF02863 Arginine repressor, C-terminal domain SSU12_RS07970 PF01479 S4 domain SSU12_RS07970 PF01728 FtsJ-like methyltransferase SSU12_RS07975 PF00348 Polyprenyl synthetase SSU12_RS07980 PF02609 Exonuclease VII small subunit SSU12_RS07985 PF02601 SSU12_RS07985 SSU12_RS07985 PF13742 SSU12_RS07985 SSU12_RS07990 PF04228 SSU12_RS07990 SSU12_RS07995 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SSU12_RS08000 PF00512 His Kinase A (phospho-acceptor) domain SSU12_RS08000 PF00672 HAMP domain SSU12_RS08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSU12_RS08005 PF00072 Response regulator receiver domain SSU12_RS08005 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS08010 PF02517 CAAX protease self-immunity SSU12_RS08015 PF00092 von Willebrand factor type A domain SSU12_RS08030 PF01368 DHH family SSU12_RS08030 PF02833 DHHA2 domain SSU12_RS08035 PF01432 Peptidase family M3 SSU12_RS08040 PF04055 Radical SAM superfamily SSU12_RS08040 PF13353 4Fe-4S single cluster domain SSU12_RS08045 PF00571 CBS domain SSU12_RS08045 PF01595 SSU12_RS08045 SSU12_RS08045 PF03471 Transporter associated domain SSU12_RS08050 PF00005 ABC transporter SSU12_RS08055 PF06962 Putative rRNA methylase SSU12_RS08060 PF06750 SSU12_RS08060 SSU12_RS08065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SSU12_RS08070 PF02540 NAD synthase SSU12_RS08075 PF04892 SSU12_RS08075 SSU12_RS08080 PF04055 Radical SAM superfamily SSU12_RS08080 PF13394 4Fe-4S single cluster domain SSU12_RS08085 PF06265 Protein of unknown function (DUF1027) SSU12_RS08090 PF05362 Lon protease (S16) C-terminal proteolytic domain SSU12_RS08090 PF13180 PDZ domain SSU12_RS08095 PF01467 Cytidylyltransferase SSU12_RS08100 PF03602 Conserved hypothetical protein 95 SSU12_RS08110 PF00581 Rhodanese-like domain SSU12_RS08115 PF06014 Bacterial protein of unknown function (DUF910) SSU12_RS08120 PF00072 Response regulator receiver domain SSU12_RS08120 PF00196 Bacterial regulatory proteins, luxR family SSU12_RS08125 PF07730 Histidine kinase SSU12_RS08130 PF12698 ABC-2 family transporter protein SSU12_RS08135 PF00005 ABC transporter SSU12_RS08140 PF00210 Ferritin-like domain SSU12_RS08145 PF05532 CsbD-like SSU12_RS08150 PF01451 Low molecular weight phosphotyrosine protein phosphatase SSU12_RS08155 PF02493 MORN repeat SSU12_RS08160 PF01757 SSU12_RS08160 SSU12_RS08165 PF01569 PAP2 superfamily SSU12_RS08170 PF12822 Protein of unknown function (DUF3816) SSU12_RS08175 PF00588 SpoU rRNA Methylase family SSU12_RS08185 PF01809 SSU12_RS08185 SSU12_RS08190 PF00849 RNA pseudouridylate synthase SSU12_RS08190 PF01479 S4 domain SSU12_RS08195 PF04079 Putative transcriptional regulators (Ypuh-like) SSU12_RS08200 PF02616 ScpA/B protein SSU12_RS08205 PF00589 Phage integrase family SSU12_RS08210 PF00571 CBS domain SSU12_RS08215 PF12850 Calcineurin-like phosphoesterase superfamily domain SSU12_RS08220 PF01725 Ham1 family SSU12_RS08225 PF01177 Asp/Glu/Hydantoin racemase SSU12_RS08230 PF03672 SSU12_RS08230 SSU12_RS08235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SSU12_RS08235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SSU12_RS08240 PF03051 Peptidase C1-like family SSU12_RS08245 PF01027 Inhibitor of apoptosis-promoting Bax1 SSU12_RS08255 PF00588 SpoU rRNA Methylase family SSU12_RS08255 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSU12_RS08260 PF00708 Acylphosphatase SSU12_RS08265 PF02096 60Kd inner membrane protein SSU12_RS08270 PF01272 Transcription elongation factor, GreA/GreB, C-term SSU12_RS08270 PF03449 Transcription elongation factor, N-terminal SSU12_RS08275 PF02618 YceG-like family SSU12_RS08280 PF00583 Acetyltransferase (GNAT) family SSU12_RS08285 PF01225 Mur ligase family, catalytic domain SSU12_RS08285 PF02875 Mur ligase family, glutamate ligase domain SSU12_RS08285 PF08245 Mur ligase middle domain SSU12_RS08295 PF00176 SNF2 family N-terminal domain SSU12_RS08295 PF00271 Helicase conserved C-terminal domain SSU12_RS08295 PF04434 SSU12_RS08295 SSU12_RS08295 PF08455 SSU12_RS08295 SSU12_RS08310 PF01926 50S ribosome-binding GTPase SSU12_RS08310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SSU12_RS08315 PF00881 Nitroreductase family SSU12_RS08320 PF01695 IstB-like ATP binding protein SSU12_RS08320 PF07319 Primosomal protein DnaI N-terminus SSU12_RS08330 PF03477 ATP cone domain SSU12_RS08335 PF01594 SSU12_RS08335 SSU12_RS08340 PF00072 Response regulator receiver domain SSU12_RS08340 PF00486 Transcriptional regulatory protein, C terminal SSU12_RS08345 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SSU12_RS08345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SSU12_RS08350 PF02620 SSU12_RS08350 SSU12_RS08355 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS08360 PF13268 SSU12_RS08360 SSU12_RS08365 PF00270 DEAD/DEAH box helicase SSU12_RS08365 PF00271 Helicase conserved C-terminal domain SSU12_RS08375 PF00953 Glycosyl transferase family 4 SSU12_RS08375 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SSU12_RS08380 PF00905 Penicillin binding protein transpeptidase domain SSU12_RS08380 PF03717 Penicillin-binding Protein dimerisation domain SSU12_RS08380 PF03793 PASTA domain SSU12_RS08390 PF01795 MraW methylase family SSU12_RS08395 PF01381 Helix-turn-helix SSU12_RS08400 PF11683 SSU12_RS08400 SSU12_RS08410 PF11683 SSU12_RS08410 SSU12_RS08425 PF07009 Protein of unknown function (DUF1312) SSU12_RS08430 PF01040 UbiA prenyltransferase family SSU12_RS08435 PF02424 ApbE family SSU12_RS08440 PF04205 FMN-binding domain SSU12_RS08445 PF00348 Polyprenyl synthetase SSU12_RS08450 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS08455 PF07456 SSU12_RS08455 SSU12_RS08465 PF02386 Cation transport protein SSU12_RS08470 PF02080 TrkA-C domain SSU12_RS08470 PF02254 TrkA-N domain SSU12_RS08475 PF01554 MatE SSU12_RS08485 PF05979 Bacterial protein of unknown function (DUF896) SSU12_RS08490 PF02092 SSU12_RS08490 SSU12_RS08495 PF02091 Glycyl-tRNA synthetase alpha subunit SSU12_RS08500 PF07166 Protein of unknown function (DUF1398) SSU12_RS08505 PF03483 B3/4 domain SSU12_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS08515 PF00005 ABC transporter SSU12_RS08515 PF09383 NIL domain SSU12_RS08520 PF01546 Peptidase family M20/M25/M40 SSU12_RS08520 PF07687 Peptidase dimerisation domain SSU12_RS08525 PF03180 NLPA lipoprotein SSU12_RS08530 PF07722 Peptidase C26 SSU12_RS08535 PF01717 Cobalamin-independent synthase, Catalytic domain SSU12_RS08535 PF08267 Cobalamin-independent synthase, N-terminal domain SSU12_RS08540 PF02219 Methylenetetrahydrofolate reductase SSU12_RS08545 PF00860 Permease family SSU12_RS08550 PF08282 haloacid dehalogenase-like hydrolase SSU12_RS08555 PF03610 PTS system fructose IIA component SSU12_RS08555 PF03830 PTS system sorbose subfamily IIB component SSU12_RS08560 PF03609 SSU12_RS08560 SSU12_RS08565 PF03613 SSU12_RS08565 SSU12_RS08570 PF06115 SSU12_RS08570 SSU12_RS08575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU12_RS08575 PF02403 Seryl-tRNA synthetase N-terminal domain SSU12_RS08580 PF02384 N-6 DNA Methylase SSU12_RS08580 PF12161 HsdM N-terminal domain SSU12_RS08585 PF01420 Type I restriction modification DNA specificity domain SSU12_RS08590 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SSU12_RS08590 PF04851 Type III restriction enzyme, res subunit SSU12_RS08590 PF12008 Type I restriction and modification enzyme - subunit R C terminal SSU12_RS08595 PF01420 Type I restriction modification DNA specificity domain SSU12_RS08600 PF00589 Phage integrase family SSU12_RS08605 PF02517 CAAX protease self-immunity SSU12_RS08620 PF13673 Acetyltransferase (GNAT) domain SSU12_RS08625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SSU12_RS08630 PF01039 Carboxyl transferase domain SSU12_RS08635 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SSU12_RS08635 PF02785 Biotin carboxylase C-terminal domain SSU12_RS08635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SSU12_RS08640 PF07977 FabA-like domain SSU12_RS08645 PF00364 Biotin-requiring enzyme SSU12_RS08650 PF00109 Beta-ketoacyl synthase, N-terminal domain SSU12_RS08650 PF02801 Beta-ketoacyl synthase, C-terminal domain SSU12_RS08655 PF13561 Enoyl-(Acyl carrier protein) reductase SSU12_RS08660 PF00698 Acyl transferase domain SSU12_RS08665 PF03060 Nitronate monooxygenase SSU12_RS08670 PF00550 Phosphopantetheine attachment site SSU12_RS08675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SSU12_RS08675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SSU12_RS08680 PF01047 MarR family SSU12_RS08685 PF00378 Enoyl-CoA hydratase/isomerase family SSU12_RS08690 PF13419 Haloacid dehalogenase-like hydrolase SSU12_RS08695 PF00696 Amino acid kinase family SSU12_RS08695 PF13840 ACT domain SSU12_RS08705 PF00842 Alanine racemase, C-terminal domain SSU12_RS08705 PF01168 Alanine racemase, N-terminal domain SSU12_RS08710 PF01648 4'-phosphopantetheinyl transferase superfamily SSU12_RS08715 PF01043 SecA preprotein cross-linking domain SSU12_RS08715 PF02810 SEC-C motif SSU12_RS08715 PF07516 SecA Wing and Scaffold domain SSU12_RS08715 PF07517 SecA DEAD-like domain SSU12_RS08720 PF01841 Transglutaminase-like superfamily SSU12_RS08725 PF00480 ROK family SSU12_RS08730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SSU12_RS08730 PF00367 phosphotransferase system, EIIB SSU12_RS08730 PF02378 Phosphotransferase system, EIIC SSU12_RS08735 PF00251 Glycosyl hydrolases family 32 N-terminal domain SSU12_RS08735 PF08244 Glycosyl hydrolases family 32 C terminal SSU12_RS08740 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS08740 PF13377 Periplasmic binding protein-like domain SSU12_RS08745 PF01029 NusB family SSU12_RS08750 PF03780 SSU12_RS08750 SSU12_RS08755 PF01132 Elongation factor P (EF-P) OB domain SSU12_RS08755 PF08207 Elongation factor P (EF-P) KOW-like domain SSU12_RS08755 PF09285 Elongation factor P, C-terminal SSU12_RS08760 PF00557 Metallopeptidase family M24 SSU12_RS08760 PF01321 Creatinase/Prolidase N-terminal domain SSU12_RS08765 PF00005 ABC transporter SSU12_RS08770 PF01544 CorA-like Mg2+ transporter protein SSU12_RS08775 PF06570 SSU12_RS08775 SSU12_RS08785 PF01084 Ribosomal protein S18 SSU12_RS08790 PF00436 Single-strand binding protein family SSU12_RS08795 PF01250 Ribosomal protein S6 SSU12_RS08800 PF13936 Helix-turn-helix domain SSU12_RS08805 PF03099 Biotin/lipoate A/B protein ligase family SSU12_RS08805 PF10437 Bacterial lipoate protein ligase C-terminus SSU12_RS08815 PF00364 Biotin-requiring enzyme SSU12_RS08815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SSU12_RS08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS08820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SSU12_RS08820 PF00364 Biotin-requiring enzyme SSU12_RS08820 PF02817 e3 binding domain SSU12_RS08825 PF02779 Transketolase, pyrimidine binding domain SSU12_RS08825 PF02780 Transketolase, C-terminal domain SSU12_RS08830 PF00676 Dehydrogenase E1 component SSU12_RS08835 PF03458 SSU12_RS08835 SSU12_RS08840 PF14262 Domain of unknown function (DUF4353) SSU12_RS08850 PF02033 Ribosome-binding factor A SSU12_RS08855 PF00009 Elongation factor Tu GTP binding domain SSU12_RS08855 PF04760 Translation initiation factor IF-2, N-terminal region SSU12_RS08855 PF11987 Translation-initiation factor 2 SSU12_RS08860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SSU12_RS08865 PF04296 Protein of unknown function (DUF448) SSU12_RS08870 PF00575 S1 RNA binding domain SSU12_RS08870 PF08529 NusA N-terminal domain SSU12_RS08870 PF13184 NusA-like KH domain SSU12_RS08875 PF02576 Uncharacterised BCR, YhbC family COG0779 SSU12_RS08880 PF02390 Putative methyltransferase SSU12_RS08885 PF01636 Phosphotransferase enzyme family SSU12_RS08890 PF05975 SSU12_RS08890 SSU12_RS08895 PF00005 ABC transporter SSU12_RS08900 PF01230 HIT domain SSU12_RS08910 PF03816 Cell envelope-related transcriptional attenuator domain SSU12_RS08915 PF00583 Acetyltransferase (GNAT) family SSU12_RS08920 PF02367 Uncharacterised P-loop hydrolase UPF0079 SSU12_RS08925 PF02734 DAK2 domain SSU12_RS08925 PF13684 Dihydroxyacetone kinase family SSU12_RS08940 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS08950 PF00005 ABC transporter SSU12_RS08950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSU12_RS08955 PF00005 ABC transporter SSU12_RS08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SSU12_RS08960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SSU12_RS08965 PF00768 D-alanyl-D-alanine carboxypeptidase SSU12_RS08965 PF07943 Penicillin-binding protein 5, C-terminal domain SSU12_RS08970 PF01458 Uncharacterized protein family (UPF0051) SSU12_RS08975 PF01592 NifU-like N terminal domain SSU12_RS08980 PF00266 Aminotransferase class-V SSU12_RS08985 PF01458 Uncharacterized protein family (UPF0051) SSU12_RS08990 PF00005 ABC transporter SSU12_RS08995 PF00953 Glycosyl transferase family 4 SSU12_RS09000 PF05389 Negative regulator of genetic competence (MecA) SSU12_RS09005 PF02673 SSU12_RS09005 SSU12_RS09010 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS09010 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS09015 PF00005 ABC transporter SSU12_RS09025 PF01145 SPFH domain / Band 7 family SSU12_RS09030 PF00291 Pyridoxal-phosphate dependent enzyme SSU12_RS09030 PF00585 C-terminal regulatory domain of Threonine dehydratase SSU12_RS09035 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SSU12_RS09035 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain SSU12_RS09040 PF01842 ACT domain SSU12_RS09040 PF10369 Small subunit of acetolactate synthase SSU12_RS09045 PF00205 Thiamine pyrophosphate enzyme, central domain SSU12_RS09045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SSU12_RS09045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SSU12_RS09050 PF00535 Glycosyl transferase family 2 SSU12_RS09050 PF04138 SSU12_RS09050 SSU12_RS09055 PF09992 Predicted periplasmic protein (DUF2233) SSU12_RS09065 PF00920 Dehydratase family SSU12_RS09075 PF01883 Domain of unknown function DUF59 SSU12_RS09085 PF01243 Pyridoxamine 5'-phosphate oxidase SSU12_RS09090 PF00380 Ribosomal protein S9/S16 SSU12_RS09095 PF00572 Ribosomal protein L13 SSU12_RS09100 PF02645 Uncharacterised protein, DegV family COG1307 SSU12_RS09105 PF05991 SSU12_RS09105 SSU12_RS09110 PF00588 SpoU rRNA Methylase family SSU12_RS09110 PF08032 RNA 2'-O ribose methyltransferase substrate binding SSU12_RS09115 PF03793 PASTA domain SSU12_RS09120 PF08570 SSU12_RS09120 SSU12_RS09125 PF06081 SSU12_RS09125 SSU12_RS09125 PF11728 DUF939 C-terminal domain SSU12_RS09135 PF00005 ABC transporter SSU12_RS09135 PF03459 TOBE domain SSU12_RS09140 PF13556 PucR C-terminal helix-turn-helix domain SSU12_RS09145 PF00072 Response regulator receiver domain SSU12_RS09145 PF12833 Helix-turn-helix domain SSU12_RS09150 PF06580 SSU12_RS09150 SSU12_RS09155 PF04854 SSU12_RS09155 SSU12_RS09160 PF01548 SSU12_RS09160 SSU12_RS09160 PF02371 SSU12_RS09160 SSU12_RS09165 PF01547 Bacterial extracellular solute-binding protein SSU12_RS09165 PF12010 SSU12_RS09165 SSU12_RS09170 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS09185 PF00480 ROK family SSU12_RS09195 PF06824 Protein of unknown function (DUF1237) SSU12_RS09200 PF07971 Glycosyl hydrolase family 92 SSU12_RS09205 PF03644 Glycosyl hydrolase family 85 SSU12_RS09205 PF04650 SSU12_RS09205 SSU12_RS09205 PF07501 G5 domain SSU12_RS09205 PF07523 Bacterial Ig-like domain (group 3) SSU12_RS09210 PF00636 Ribonuclease III domain SSU12_RS09215 PF01406 tRNA synthetases class I (C) catalytic domain SSU12_RS09215 PF09190 DALR domain SSU12_RS09225 PF01048 Phosphorylase superfamily SSU12_RS09230 PF00132 Bacterial transferase hexapeptide (six repeats) SSU12_RS09235 PF00013 KH domain SSU12_RS09235 PF00575 S1 RNA binding domain SSU12_RS09235 PF01138 3' exoribonuclease family, domain 1 SSU12_RS09235 PF03725 3' exoribonuclease family, domain 2 SSU12_RS09235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SSU12_RS09245 PF13302 Acetyltransferase (GNAT) domain SSU12_RS09250 PF05913 Bacterial protein of unknown function (DUF871) SSU12_RS09255 PF00367 phosphotransferase system, EIIB SSU12_RS09255 PF02378 Phosphotransferase system, EIIC SSU12_RS09260 PF13580 SIS domain SSU12_RS09265 PF01380 SIS domain SSU12_RS09265 PF01418 Helix-turn-helix domain, rpiR family SSU12_RS09270 PF00312 Ribosomal protein S15 SSU12_RS09275 PF00860 Permease family SSU12_RS09290 PF00849 RNA pseudouridylate synthase SSU12_RS09290 PF01479 S4 domain SSU12_RS09295 PF13673 Acetyltransferase (GNAT) domain SSU12_RS09305 PF07690 Major Facilitator Superfamily SSU12_RS09310 PF01327 Polypeptide deformylase SSU12_RS09315 PF01300 Telomere recombination SSU12_RS09320 PF00694 Aconitase C-terminal domain SSU12_RS09325 PF00330 Aconitase family (aconitate hydratase) SSU12_RS09330 PF00180 Isocitrate/isopropylmalate dehydrogenase SSU12_RS09335 PF00682 HMGL-like SSU12_RS09335 PF08502 LeuA allosteric (dimerisation) domain SSU12_RS09340 PF04226 SSU12_RS09340 SSU12_RS09345 PF02073 Thermophilic metalloprotease (M29) SSU12_RS09350 PF00881 Nitroreductase family SSU12_RS09355 PF04011 LemA family SSU12_RS09360 PF00929 Exonuclease SSU12_RS09360 PF02811 PHP domain SSU12_RS09360 PF07733 Bacterial DNA polymerase III alpha subunit SSU12_RS09360 PF11490 SSU12_RS09360 SSU12_RS09360 PF14480 SSU12_RS09360 SSU12_RS09365 PF02733 Dak1 domain SSU12_RS09370 PF00440 Bacterial regulatory proteins, tetR family SSU12_RS09370 PF14278 SSU12_RS09370 SSU12_RS09375 PF02733 Dak1 domain SSU12_RS09380 PF02734 DAK2 domain SSU12_RS09385 PF03610 PTS system fructose IIA component SSU12_RS09390 PF00230 Major intrinsic protein SSU12_RS09395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SSU12_RS09395 PF03129 Anticodon binding domain SSU12_RS09395 PF04073 Aminoacyl-tRNA editing domain SSU12_RS09400 PF02163 Peptidase family M50 SSU12_RS09405 PF01148 Cytidylyltransferase family SSU12_RS09410 PF01255 Putative undecaprenyl diphosphate synthase SSU12_RS09415 PF02699 Preprotein translocase subunit SSU12_RS09420 PF00709 Adenylosuccinate synthetase SSU12_RS09425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SSU12_RS09425 PF04262 Glutamate-cysteine ligase SSU12_RS09430 PF03372 Endonuclease/Exonuclease/phosphatase family SSU12_RS09435 PF01430 Hsp33 protein SSU12_RS09440 PF01207 Dihydrouridine synthase (Dus) SSU12_RS09445 PF00293 NUDIX domain SSU12_RS09450 PF04973 SSU12_RS09450 SSU12_RS09455 PF01467 Cytidylyltransferase SSU12_RS09455 PF13521 AAA domain SSU12_RS09460 PF00004 ATPase family associated with various cellular activities (AAA) SSU12_RS09460 PF02861 Clp amino terminal domain SSU12_RS09460 PF07724 AAA domain (Cdc48 subfamily) SSU12_RS09460 PF10431 C-terminal, D2-small domain, of ClpB protein SSU12_RS09465 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SSU12_RS09470 PF00085 Thioredoxin SSU12_RS09480 PF00889 Elongation factor TS SSU12_RS09485 PF00318 Ribosomal protein S2 SSU12_RS09500 PF00082 Subtilase family SSU12_RS09500 PF04650 SSU12_RS09500 SSU12_RS09500 PF06280 Fn3-like domain (DUF1034) SSU12_RS09505 PF00467 KOW motif SSU12_RS09505 PF02357 Transcription termination factor nusG SSU12_RS09510 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SSU12_RS09515 PF00471 Ribosomal protein L33 SSU12_RS09520 PF00905 Penicillin binding protein transpeptidase domain SSU12_RS09520 PF00912 Transglycosylase SSU12_RS09525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SSU12_RS09530 PF00849 RNA pseudouridylate synthase SSU12_RS09535 PF00156 Phosphoribosyl transferase domain SSU12_RS09535 PF09182 Bacterial purine repressor, N-terminal SSU12_RS09540 PF01636 Phosphotransferase enzyme family SSU12_RS09545 PF01966 HD domain SSU12_RS09550 PF02646 SSU12_RS09550 SSU12_RS09555 PF04263 Thiamin pyrophosphokinase, catalytic domain SSU12_RS09555 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SSU12_RS09560 PF00834 Ribulose-phosphate 3 epimerase family SSU12_RS09565 PF03193 Protein of unknown function, DUF258 SSU12_RS09565 PF16745 SSU12_RS09565 SSU12_RS09580 PF00005 ABC transporter SSU12_RS09580 PF00664 ABC transporter transmembrane region SSU12_RS09585 PF04055 Radical SAM superfamily SSU12_RS09585 PF13394 4Fe-4S single cluster domain SSU12_RS09590 PF12844 Helix-turn-helix domain SSU12_RS09600 PF00884 Sulfatase SSU12_RS09610 PF00398 Ribosomal RNA adenine dimethylase SSU12_RS09615 PF08002 Protein of unknown function (DUF1697) SSU12_RS09620 PF06769 Plasmid encoded toxin Txe SSU12_RS09625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SSU12_RS09630 PF00293 NUDIX domain SSU12_RS09635 PF05016 Plasmid stabilisation system protein SSU12_RS09650 PF13331 SSU12_RS09650 SSU12_RS09650 PF13662 Toprim domain SSU12_RS09655 PF01026 TatD related DNase SSU12_RS09660 PF00468 Ribosomal protein L34 SSU12_RS09665 PF01424 R3H domain SSU12_RS09665 PF13083 KH domain SSU12_RS09665 PF14804 Jag N-terminus SSU12_RS09670 PF02096 60Kd inner membrane protein SSU12_RS09675 PF00825 Ribonuclease P SSU12_RS09680 PF00206 Lyase SSU12_RS09680 PF14698 Argininosuccinate lyase C-terminal SSU12_RS09685 PF00764 Arginosuccinate synthase SSU12_RS09695 PF02829 3H domain SSU12_RS09695 PF08279 HTH domain SSU12_RS09700 PF06983 3-demethylubiquinone-9 3-methyltransferase SSU12_RS09705 PF00293 NUDIX domain SSU12_RS09710 PF02574 Homocysteine S-methyltransferase SSU12_RS09715 PF00324 Amino acid permease SSU12_RS09720 PF00749 tRNA synthetases class I (E and Q), catalytic domain SSU12_RS09725 PF07690 Major Facilitator Superfamily SSU12_RS09735 PF04397 LytTr DNA-binding domain SSU12_RS09740 PF01987 Mitochondrial biogenesis AIM24 SSU12_RS09745 PF00484 Carbonic anhydrase SSU12_RS09750 PF13481 AAA domain SSU12_RS09750 PF13541 Subunit ChlI of Mg-chelatase SSU12_RS09755 PF00300 Histidine phosphatase superfamily (branch 1) SSU12_RS09760 PF00692 dUTPase SSU12_RS09765 PF00005 ABC transporter SSU12_RS09765 PF00664 ABC transporter transmembrane region SSU12_RS09770 PF00005 ABC transporter SSU12_RS09770 PF00664 ABC transporter transmembrane region SSU12_RS09775 PF12802 MarR family SSU12_RS09780 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SSU12_RS09780 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SSU12_RS09785 PF00483 Nucleotidyl transferase SSU12_RS09790 PF01694 Rhomboid family SSU12_RS09795 PF01812 5-formyltetrahydrofolate cyclo-ligase family SSU12_RS09800 PF01546 Peptidase family M20/M25/M40 SSU12_RS09800 PF07687 Peptidase dimerisation domain SSU12_RS09805 PF00132 Bacterial transferase hexapeptide (six repeats) SSU12_RS09805 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SSU12_RS09805 PF14602 Hexapeptide repeat of succinyl-transferase SSU12_RS09820 PF00149 Calcineurin-like phosphoesterase SSU12_RS09825 PF00342 Phosphoglucose isomerase SSU12_RS09835 PF14437 SSU12_RS09835 SSU12_RS09840 PF00456 Transketolase, thiamine diphosphate binding domain SSU12_RS09840 PF02779 Transketolase, pyrimidine binding domain SSU12_RS09840 PF02780 Transketolase, C-terminal domain SSU12_RS09845 PF13483 Beta-lactamase superfamily domain SSU12_RS09850 PF00874 PRD domain SSU12_RS09850 PF08279 HTH domain SSU12_RS09860 PF00596 Class II Aldolase and Adducin N-terminal domain SSU12_RS09865 PF01261 Xylose isomerase-like TIM barrel SSU12_RS09870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SSU12_RS09875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU12_RS09880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS09885 PF03611 SSU12_RS09885 SSU12_RS09890 PF00128 Alpha amylase, catalytic domain SSU12_RS09890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU12_RS09890 PF03714 Bacterial pullanase-associated domain SSU12_RS09895 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS09895 PF13377 Periplasmic binding protein-like domain SSU12_RS09900 PF00005 ABC transporter SSU12_RS09905 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS09910 PF00497 Bacterial extracellular solute-binding proteins, family 3 SSU12_RS09915 PF05257 CHAP domain SSU12_RS09920 PF02378 Phosphotransferase system, EIIC SSU12_RS09925 PF11687 SSU12_RS09925 SSU12_RS09930 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SSU12_RS09935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS09940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SSU12_RS09940 PF00874 PRD domain SSU12_RS09940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SSU12_RS09940 PF05043 Mga helix-turn-helix domain SSU12_RS09940 PF08279 HTH domain SSU12_RS09945 PF05913 Bacterial protein of unknown function (DUF871) SSU12_RS09950 PF00232 Glycosyl hydrolase family 1 SSU12_RS09955 PF02056 Family 4 glycosyl hydrolase SSU12_RS09955 PF11975 Family 4 glycosyl hydrolase C-terminal domain SSU12_RS09960 PF00133 tRNA synthetases class I (I, L, M and V) SSU12_RS09960 PF08264 Anticodon-binding domain of tRNA SSU12_RS09960 PF09334 tRNA synthetases class I (M) SSU12_RS09960 PF13603 Leucyl-tRNA synthetase, Domain 2 SSU12_RS09965 PF01431 Peptidase family M13 SSU12_RS09965 PF05649 Peptidase family M13 SSU12_RS09970 PF00950 SSU12_RS09970 SSU12_RS09975 PF00950 SSU12_RS09975 SSU12_RS09980 PF00005 ABC transporter SSU12_RS09990 PF01297 Periplasmic solute binding protein family SSU12_RS09995 PF01325 Iron dependent repressor, N-terminal DNA binding domain SSU12_RS09995 PF02742 Iron dependent repressor, metal binding and dimerisation domain SSU12_RS09995 PF04023 FeoA domain SSU12_RS10005 PF02517 CAAX protease self-immunity SSU12_RS10015 PF16935 SSU12_RS10015 SSU12_RS10025 PF02580 D-Tyr-tRNA(Tyr) deacylase SSU12_RS10030 PF02824 TGS domain SSU12_RS10030 PF04607 Region found in RelA / SpoT proteins SSU12_RS10030 PF13291 ACT domain SSU12_RS10030 PF13328 HD domain SSU12_RS10035 PF00149 Calcineurin-like phosphoesterase SSU12_RS10035 PF02872 5'-nucleotidase, C-terminal domain SSU12_RS10045 PF04474 SSU12_RS10045 SSU12_RS10050 PF04452 RNA methyltransferase SSU12_RS10055 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SSU12_RS10060 PF04266 ASCH domain SSU12_RS10065 PF11217 Protein of unknown function (DUF3013) SSU12_RS10070 PF00004 ATPase family associated with various cellular activities (AAA) SSU12_RS10070 PF12002 MgsA AAA+ ATPase C terminal SSU12_RS10070 PF16193 SSU12_RS10070 SSU12_RS10080 PF13353 4Fe-4S single cluster domain SSU12_RS10090 PF13302 Acetyltransferase (GNAT) domain SSU12_RS10095 PF00149 Calcineurin-like phosphoesterase SSU12_RS10095 PF02872 5'-nucleotidase, C-terminal domain SSU12_RS10105 PF03477 ATP cone domain SSU12_RS10105 PF13597 Anaerobic ribonucleoside-triphosphate reductase SSU12_RS10110 PF01609 Transposase DDE domain SSU12_RS10120 PF11457 SSU12_RS10120 SSU12_RS10125 PF04397 LytTr DNA-binding domain SSU12_RS10130 PF00488 MutS domain V SSU12_RS10130 PF01624 MutS domain I SSU12_RS10130 PF05188 MutS domain II SSU12_RS10130 PF05190 MutS family domain IV SSU12_RS10130 PF05192 MutS domain III SSU12_RS10135 PF01316 Arginine repressor, DNA binding domain SSU12_RS10135 PF02863 Arginine repressor, C-terminal domain SSU12_RS10140 PF00750 tRNA synthetases class I (R) SSU12_RS10140 PF03485 Arginyl tRNA synthetase N terminal domain SSU12_RS10140 PF05746 DALR anticodon binding domain SSU12_RS10145 PF05257 CHAP domain SSU12_RS10145 PF08460 Bacterial SH3 domain SSU12_RS10160 PF02446 4-alpha-glucanotransferase SSU12_RS10165 PF13416 Bacterial extracellular solute-binding protein SSU12_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component SSU12_RS10185 PF00356 Bacterial regulatory proteins, lacI family SSU12_RS10185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SSU12_RS10190 PF00128 Alpha amylase, catalytic domain SSU12_RS10190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SSU12_RS10195 PF07972 NrdI Flavodoxin like SSU12_RS10200 PF02588 SSU12_RS10200 SSU12_RS10200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU12_RS10205 PF00152 tRNA synthetases class II (D, K and N) SSU12_RS10205 PF01336 OB-fold nucleic acid binding domain SSU12_RS10205 PF02938 GAD domain SSU12_RS10210 PF13673 Acetyltransferase (GNAT) domain SSU12_RS10215 PF00248 Aldo/keto reductase family SSU12_RS10220 PF00535 Glycosyl transferase family 2 SSU12_RS10225 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU12_RS10225 PF01915 Glycosyl hydrolase family 3 C-terminal domain SSU12_RS10225 PF14310 Fibronectin type III-like domain SSU12_RS10230 PF04138 SSU12_RS10230 SSU12_RS10235 PF00933 Glycosyl hydrolase family 3 N terminal domain SSU12_RS10235 PF01915 Glycosyl hydrolase family 3 C-terminal domain SSU12_RS10235 PF14310 Fibronectin type III-like domain SSU12_RS10240 PF00072 Response regulator receiver domain SSU12_RS10240 PF04397 LytTr DNA-binding domain SSU12_RS10245 PF14501 GHKL domain SSU12_RS10250 PF00149 Calcineurin-like phosphoesterase SSU12_RS10255 PF00890 FAD binding domain SSU12_RS10265 PF00163 Ribosomal protein S4/S9 N-terminal domain SSU12_RS10265 PF01479 S4 domain SSU12_RS10275 PF06257 Protein of unknown function (DUF1021) SSU12_RS10280 PF00772 DnaB-like helicase N terminal domain SSU12_RS10280 PF03796 DnaB-like helicase C terminal domain SSU12_RS10285 PF01281 Ribosomal protein L9, N-terminal domain SSU12_RS10285 PF03948 Ribosomal protein L9, C-terminal domain SSU12_RS10290 PF01368 DHH family SSU12_RS10290 PF02272 DHHA1 domain SSU12_RS10295 PF01134 Glucose inhibited division protein A SSU12_RS10295 PF13932 GidA associated domain 3 SSU12_RS10300 PF00293 NUDIX domain SSU12_RS10305 PF00293 NUDIX domain SSU12_RS10310 PF00293 NUDIX domain SSU12_RS10315 PF01638 HxlR-like helix-turn-helix SSU12_RS10320 PF12680 SnoaL-like domain SSU12_RS10325 PF03054 tRNA methyl transferase SSU12_RS10330 PF01842 ACT domain SSU12_RS10330 PF03315 Serine dehydratase beta chain SSU12_RS10335 PF03313 SSU12_RS10335 SSU12_RS10340 PF01476 LysM domain SSU12_RS10345 PF02361 Cobalt transport protein SSU12_RS10350 PF00005 ABC transporter SSU12_RS10355 PF00005 ABC transporter SSU12_RS10360 PF01066 CDP-alcohol phosphatidyltransferase SSU12_RS10365 PF13413 Helix-turn-helix domain SSU12_RS10370 PF00675 Insulinase (Peptidase family M16) SSU12_RS10370 PF05193 Peptidase M16 inactive domain SSU12_RS10375 PF05193 Peptidase M16 inactive domain SSU12_RS10380 PF13275 S4 domain SSU12_RS10385 PF02463 RecF/RecN/SMC N terminal domain SSU12_RS10390 PF00478 IMP dehydrogenase / GMP reductase domain SSU12_RS10390 PF00571 CBS domain SSU12_RS10395 PF00579 tRNA synthetases class I (W and Y) SSU12_RS10400 PF02588 SSU12_RS10400 SSU12_RS10400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SSU12_RS10405 PF00005 ABC transporter SSU12_RS10405 PF12848 ABC transporter SSU12_RS10410 PF09586 SSU12_RS10410 SSU12_RS10430 PF06912 SSU12_RS10430 SSU12_RS10435 PF02590 Predicted SPOUT methyltransferase SSU12_RS10440 PF13180 PDZ domain SSU12_RS10440 PF13365 Trypsin-like peptidase domain SSU12_RS10445 PF02195 ParB-like nuclease domain SSU12_RS10455 PF00589 Phage integrase family