locus-tag class description LIO33_RS00005 PF00308 Bacterial dnaA protein LIO33_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LIO33_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LIO33_RS00010 PF02767 DNA polymerase III beta subunit, central domain LIO33_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LIO33_RS00025 PF01381 Helix-turn-helix LIO33_RS00030 PF01926 50S ribosome-binding GTPase LIO33_RS00030 PF06071 Protein of unknown function (DUF933) LIO33_RS00035 PF01195 Peptidyl-tRNA hydrolase LIO33_RS00040 PF17757 UvrB interaction domain LIO33_RS00040 PF03461 TRCF domain LIO33_RS00040 PF00271 Helicase conserved C-terminal domain LIO33_RS00040 PF00270 DEAD/DEAH box helicase LIO33_RS00040 PF02559 CarD-like/TRCF domain LIO33_RS00045 PF01479 S4 domain LIO33_RS00060 PF01171 PP-loop family LIO33_RS00065 PF00156 Phosphoribosyl transferase domain LIO33_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) LIO33_RS00070 PF17862 AAA+ lid domain LIO33_RS00070 PF06480 FtsH Extracellular LIO33_RS00070 PF01434 Peptidase family M41 LIO33_RS00180 PF04085 rod shape-determining protein MreC LIO33_RS00195 PF14572 Phosphoribosyl synthetase-associated domain LIO33_RS00195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIO33_RS00200 PF00155 Aminotransferase class I and II LIO33_RS00205 PF02565 Recombination protein O C terminal LIO33_RS00205 PF11967 Recombination protein O N terminal LIO33_RS00210 PF02504 Fatty acid synthesis protein LIO33_RS00215 PF00550 Phosphopantetheine attachment site LIO33_RS00220 PF01259 SAICAR synthetase LIO33_RS00225 PF00586 AIR synthase related protein, N-terminal domain LIO33_RS00225 PF02769 AIR synthase related protein, C-terminal domain LIO33_RS00225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LIO33_RS00230 PF13537 Glutamine amidotransferase domain LIO33_RS00230 PF00156 Phosphoribosyl transferase domain LIO33_RS00235 PF02769 AIR synthase related protein, C-terminal domain LIO33_RS00235 PF00586 AIR synthase related protein, N-terminal domain LIO33_RS00240 PF00551 Formyl transferase LIO33_RS00245 PF01808 AICARFT/IMPCHase bienzyme LIO33_RS00245 PF02142 MGS-like domain LIO33_RS00250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIO33_RS00250 PF02843 Phosphoribosylglycinamide synthetase, C domain LIO33_RS00250 PF02844 Phosphoribosylglycinamide synthetase, N domain LIO33_RS00255 PF00731 AIR carboxylase LIO33_RS00260 PF02222 ATP-grasp domain LIO33_RS00260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LIO33_RS00275 PF00206 Lyase LIO33_RS00275 PF10397 Adenylosuccinate lyase C-terminus LIO33_RS00295 PF00005 ABC transporter LIO33_RS00305 PF00005 ABC transporter LIO33_RS00305 PF00664 ABC transporter transmembrane region LIO33_RS00315 PF17864 RuvB AAA lid domain LIO33_RS00315 PF05491 RuvB C-terminal winged helix domain LIO33_RS00315 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIO33_RS00325 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS00345 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS00345 PF08245 Mur ligase middle domain LIO33_RS00355 PF01119 DNA mismatch repair protein, C-terminal domain LIO33_RS00355 PF08676 MutL C terminal dimerisation domain LIO33_RS00360 PF01330 RuvA N terminal domain LIO33_RS00360 PF07499 RuvA, C-terminal domain LIO33_RS00365 PF13673 Acetyltransferase (GNAT) domain LIO33_RS00365 PF13302 Acetyltransferase (GNAT) domain LIO33_RS00365 PF03352 Methyladenine glycosylase LIO33_RS00365 PF00117 Glutamine amidotransferase class-I LIO33_RS00365 PF00958 GMP synthase C terminal domain LIO33_RS00370 PF00994 Probable molybdopterin binding domain LIO33_RS00370 PF02464 Competence-damaged protein LIO33_RS00370 PF18146 Damage-inducible protein CinA KH domain LIO33_RS00375 PF00154 recA bacterial DNA recombination protein LIO33_RS00380 PF03960 ArsC family LIO33_RS00385 PF06135 IreB regulatory phosphoprotein LIO33_RS00390 PF03652 Holliday junction resolvase LIO33_RS00395 PF06949 Protein of unknown function (DUF1292) LIO33_RS00405 PF00338 Ribosomal protein S10p/S20e LIO33_RS00410 PF00297 Ribosomal protein L3 LIO33_RS00415 PF00573 Ribosomal protein L4/L1 family LIO33_RS00420 PF00276 Ribosomal protein L23 LIO33_RS00425 PF00181 Ribosomal Proteins L2, RNA binding domain LIO33_RS00425 PF03947 Ribosomal Proteins L2, C-terminal domain LIO33_RS00430 PF00203 Ribosomal protein S19 LIO33_RS00435 PF00237 Ribosomal protein L22p/L17e LIO33_RS00440 PF07650 KH domain LIO33_RS00440 PF00189 Ribosomal protein S3, C-terminal domain LIO33_RS00445 PF00252 Ribosomal protein L16p/L10e LIO33_RS00450 PF00831 Ribosomal L29 protein LIO33_RS00455 PF00366 Ribosomal protein S17 LIO33_RS00460 PF00238 Ribosomal protein L14p/L23e LIO33_RS00465 PF00467 KOW motif LIO33_RS00465 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LIO33_RS00470 PF00281 Ribosomal protein L5 LIO33_RS00470 PF00673 ribosomal L5P family C-terminus LIO33_RS00475 PF00253 Ribosomal protein S14p/S29e LIO33_RS00480 PF00410 Ribosomal protein S8 LIO33_RS00485 PF00347 Ribosomal protein L6 LIO33_RS00490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LIO33_RS00495 PF00333 Ribosomal protein S5, N-terminal domain LIO33_RS00495 PF03719 Ribosomal protein S5, C-terminal domain LIO33_RS00500 PF00327 Ribosomal protein L30p/L7e LIO33_RS00505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LIO33_RS00510 PF00344 SecY translocase LIO33_RS00520 PF01176 Translation initiation factor 1A / IF-1 LIO33_RS00525 PF00444 Ribosomal protein L36 LIO33_RS00530 PF00416 Ribosomal protein S13/S18 LIO33_RS00535 PF00411 Ribosomal protein S11 LIO33_RS00540 PF01000 RNA polymerase Rpb3/RpoA insert domain LIO33_RS00540 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LIO33_RS00540 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LIO33_RS00545 PF01196 Ribosomal protein L17 LIO33_RS00630 PF14659 Phage integrase, N-terminal SAM-like domain LIO33_RS00630 PF00589 Phage integrase family LIO33_RS00640 PF18106 Rolling Circle replication initiation protein N-terminal domain LIO33_RS00640 PF02486 Replication initiation factor LIO33_RS00675 PF14659 Phage integrase, N-terminal SAM-like domain LIO33_RS00675 PF00589 Phage integrase family LIO33_RS00685 PF01047 MarR family LIO33_RS00690 PF00005 ABC transporter LIO33_RS00695 PF00950 ABC 3 transport family LIO33_RS00700 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LIO33_RS00700 PF01297 Zinc-uptake complex component A periplasmic LIO33_RS00705 PF03965 Penicillinase repressor LIO33_RS00720 PF01479 S4 domain LIO33_RS00720 PF00579 tRNA synthetases class I (W and Y) LIO33_RS00725 PF00912 Transglycosylase LIO33_RS00725 PF00905 Penicillin binding protein transpeptidase domain LIO33_RS00730 PF04560 RNA polymerase Rpb2, domain 7 LIO33_RS00730 PF00562 RNA polymerase Rpb2, domain 6 LIO33_RS00730 PF10385 RNA polymerase beta subunit external 1 domain LIO33_RS00730 PF04563 RNA polymerase beta subunit LIO33_RS00730 PF04561 RNA polymerase Rpb2, domain 2 LIO33_RS00730 PF04565 RNA polymerase Rpb2, domain 3 LIO33_RS00735 PF04998 RNA polymerase Rpb1, domain 5 LIO33_RS00735 PF04983 RNA polymerase Rpb1, domain 3 LIO33_RS00735 PF05000 RNA polymerase Rpb1, domain 4 LIO33_RS00735 PF04997 RNA polymerase Rpb1, domain 1 LIO33_RS00735 PF00623 RNA polymerase Rpb1, domain 2 LIO33_RS00750 PF00437 Type II/IV secretion system protein LIO33_RS00755 PF00482 Type II secretion system (T2SS), protein F LIO33_RS00760 PF07963 Prokaryotic N-terminal methylation motif LIO33_RS00790 PF00871 Acetokinase family LIO33_RS00795 PF07155 ECF-type riboflavin transporter, S component LIO33_RS00800 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS00800 PF08245 Mur ligase middle domain LIO33_RS00805 PF05343 M42 glutamyl aminopeptidase LIO33_RS00815 PF00085 Thioredoxin LIO33_RS00825 PF14794 Domain of unknown function (DUF4479) LIO33_RS00825 PF01588 Putative tRNA binding domain LIO33_RS00835 PF00436 Single-strand binding protein family LIO33_RS00845 PF00166 Chaperonin 10 Kd subunit LIO33_RS00850 PF00118 TCP-1/cpn60 chaperonin family LIO33_RS00855 PF00164 Ribosomal protein S12/S23 LIO33_RS00860 PF00177 Ribosomal protein S7p/S5e LIO33_RS00865 PF00009 Elongation factor Tu GTP binding domain LIO33_RS00865 PF03144 Elongation factor Tu domain 2 LIO33_RS00865 PF03764 Elongation factor G, domain IV LIO33_RS00865 PF00679 Elongation factor G C-terminus LIO33_RS00865 PF14492 Elongation Factor G, domain II LIO33_RS00870 PF01431 Peptidase family M13 LIO33_RS00870 PF05649 Peptidase family M13 LIO33_RS00875 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LIO33_RS00875 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LIO33_RS00880 PF00162 Phosphoglycerate kinase LIO33_RS00885 PF06081 Aromatic acid exporter family member 1 LIO33_RS00890 PF13411 MerR HTH family regulatory protein LIO33_RS00895 PF03951 Glutamine synthetase, beta-Grasp domain LIO33_RS00895 PF00120 Glutamine synthetase, catalytic domain LIO33_RS00900 PF00753 Metallo-beta-lactamase superfamily LIO33_RS00900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIO33_RS00900 PF17770 Ribonuclease J C-terminal domain LIO33_RS00905 PF07288 Protein of unknown function (DUF1447) LIO33_RS00910 PF00814 Glycoprotease family LIO33_RS00920 PF00814 Glycoprotease family LIO33_RS00925 PF02311 AraC-like ligand binding domain LIO33_RS00925 PF12833 Helix-turn-helix domain LIO33_RS00930 PF01547 Bacterial extracellular solute-binding protein LIO33_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS00945 PF16874 Glycosyl hydrolase family 36 C-terminal domain LIO33_RS00945 PF16875 Glycosyl hydrolase family 36 N-terminal domain LIO33_RS00960 PF03601 Conserved hypothetical protein 698 LIO33_RS00985 PF00005 ABC transporter LIO33_RS00985 PF13732 Domain of unknown function (DUF4162) LIO33_RS00995 PF00232 Glycosyl hydrolase family 1 LIO33_RS01000 PF04394 Protein of unknown function, DUF536 LIO33_RS01000 PF08279 HTH domain LIO33_RS01005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIO33_RS01010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS01015 PF03611 PTS system sugar-specific permease component LIO33_RS01020 PF00456 Transketolase, thiamine diphosphate binding domain LIO33_RS01025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LIO33_RS01025 PF02780 Transketolase, C-terminal domain LIO33_RS01025 PF02779 Transketolase, pyrimidine binding domain LIO33_RS01030 PF03009 Glycerophosphoryl diester phosphodiesterase family LIO33_RS01035 PF02575 YbaB/EbfC DNA-binding family LIO33_RS01040 PF01380 SIS domain LIO33_RS01050 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LIO33_RS01050 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LIO33_RS01050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LIO33_RS01065 PF02901 Pyruvate formate lyase-like LIO33_RS01065 PF01228 Glycine radical LIO33_RS01070 PF11799 impB/mucB/samB family C-terminal domain LIO33_RS01070 PF11798 IMS family HHH motif LIO33_RS01070 PF00817 impB/mucB/samB family LIO33_RS01080 PF13460 NAD(P)H-binding LIO33_RS01085 PF00294 pfkB family carbohydrate kinase LIO33_RS01095 PF00480 ROK family LIO33_RS01100 PF02378 Phosphotransferase system, EIIC LIO33_RS01110 PF00005 ABC transporter LIO33_RS01120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIO33_RS01125 PF00403 Heavy-metal-associated domain LIO33_RS01135 PF00403 Heavy-metal-associated domain LIO33_RS01140 PF13538 UvrD-like helicase C-terminal domain LIO33_RS01140 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LIO33_RS01140 PF14490 Helix-hairpin-helix containing domain LIO33_RS01145 PF10502 Signal peptidase, peptidase S26 LIO33_RS01150 PF01351 Ribonuclease HII LIO33_RS01150 PF11858 Domain of unknown function (DUF3378) LIO33_RS01155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LIO33_RS01155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LIO33_RS01165 PF00128 Alpha amylase, catalytic domain LIO33_RS01165 PF16657 Maltogenic Amylase, C-terminal domain LIO33_RS01170 PF02378 Phosphotransferase system, EIIC LIO33_RS01170 PF00367 phosphotransferase system, EIIB LIO33_RS01175 PF07702 UTRA domain LIO33_RS01175 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS01190 PF01713 Smr domain LIO33_RS01190 PF00488 MutS domain V LIO33_RS01200 PF00085 Thioredoxin LIO33_RS01205 PF13193 AMP-binding enzyme C-terminal domain LIO33_RS01205 PF00501 AMP-binding enzyme LIO33_RS01230 PF12704 MacB-like periplasmic core domain LIO33_RS01230 PF02687 FtsX-like permease family LIO33_RS01230 PF00005 ABC transporter LIO33_RS01235 PF01235 Sodium:alanine symporter family LIO33_RS01240 PF00924 Mechanosensitive ion channel LIO33_RS01250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LIO33_RS01250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LIO33_RS01255 PF01180 Dihydroorotate dehydrogenase LIO33_RS01260 PF09587 Bacterial capsule synthesis protein PGA_cap LIO33_RS01280 PF00005 ABC transporter LIO33_RS01285 PF00440 Bacterial regulatory proteins, tetR family LIO33_RS01310 PF03788 LrgA family LIO33_RS01315 PF04172 LrgB-like family LIO33_RS01320 PF01226 Formate/nitrite transporter LIO33_RS01325 PF00230 Major intrinsic protein LIO33_RS01330 PF05872 Bacterial protein of unknown function (DUF853) LIO33_RS01335 PF00293 NUDIX domain LIO33_RS01345 PF00471 Ribosomal protein L33 LIO33_RS01350 PF01783 Ribosomal L32p protein family LIO33_RS01355 PF03129 Anticodon binding domain LIO33_RS01355 PF13393 Histidyl-tRNA synthetase LIO33_RS01360 PF00107 Zinc-binding dehydrogenase LIO33_RS01360 PF08240 Alcohol dehydrogenase GroES-like domain LIO33_RS01365 PF00171 Aldehyde dehydrogenase family LIO33_RS01365 PF00465 Iron-containing alcohol dehydrogenase LIO33_RS01370 PF14821 Threonine synthase N terminus LIO33_RS01370 PF00291 Pyridoxal-phosphate dependent enzyme LIO33_RS01375 PF00005 ABC transporter LIO33_RS01375 PF00664 ABC transporter transmembrane region LIO33_RS01380 PF00005 ABC transporter LIO33_RS01380 PF00664 ABC transporter transmembrane region LIO33_RS01395 PF00005 ABC transporter LIO33_RS01400 PF01554 MatE LIO33_RS01405 PF08544 GHMP kinases C terminal LIO33_RS01405 PF10509 Galactokinase galactose-binding signature LIO33_RS01405 PF00288 GHMP kinases N terminal domain LIO33_RS01415 PF00288 GHMP kinases N terminal domain LIO33_RS01415 PF08544 GHMP kinases C terminal LIO33_RS01420 PF01070 FMN-dependent dehydrogenase LIO33_RS01425 PF00005 ABC transporter LIO33_RS01425 PF00664 ABC transporter transmembrane region LIO33_RS01430 PF00664 ABC transporter transmembrane region LIO33_RS01430 PF00005 ABC transporter LIO33_RS01440 PF05167 Uncharacterised ACR (DUF711) LIO33_RS01445 PF00300 Histidine phosphatase superfamily (branch 1) LIO33_RS01450 PF01628 HrcA protein C terminal domain LIO33_RS01450 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LIO33_RS01455 PF01025 GrpE LIO33_RS01460 PF00012 Hsp70 protein LIO33_RS01465 PF01556 DnaJ C terminal domain LIO33_RS01465 PF00226 DnaJ domain LIO33_RS01465 PF00684 DnaJ central domain LIO33_RS01470 PF03099 Biotin/lipoate A/B protein ligase family LIO33_RS01475 PF01425 Amidase LIO33_RS01480 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS01485 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS01490 PF13443 Cro/C1-type HTH DNA-binding domain LIO33_RS01505 PF01475 Ferric uptake regulator family LIO33_RS01510 PF01416 tRNA pseudouridine synthase LIO33_RS01525 PF04260 Protein of unknown function (DUF436) LIO33_RS01550 PF12697 Alpha/beta hydrolase family LIO33_RS01555 PF00106 short chain dehydrogenase LIO33_RS01560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS01560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LIO33_RS01565 PF02082 Transcriptional regulator LIO33_RS01585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LIO33_RS01585 PF05698 Bacterial trigger factor protein (TF) C-terminus LIO33_RS01585 PF05697 Bacterial trigger factor protein (TF) LIO33_RS01605 PF05066 HB1, ASXL, restriction endonuclease HTH domain LIO33_RS01610 PF06418 CTP synthase N-terminus LIO33_RS01610 PF00117 Glutamine amidotransferase class-I LIO33_RS01620 PF01116 Fructose-bisphosphate aldolase class-II LIO33_RS01625 PF00830 Ribosomal L28 family LIO33_RS01660 PF00270 DEAD/DEAH box helicase LIO33_RS01660 PF00271 Helicase conserved C-terminal domain LIO33_RS01660 PF17191 RecG wedge domain LIO33_RS01665 PF17763 Glutaminase/Asparaginase C-terminal domain LIO33_RS01665 PF00710 Asparaginase, N-terminal LIO33_RS01675 PF00582 Universal stress protein family LIO33_RS01680 PF00155 Aminotransferase class I and II LIO33_RS01685 PF08222 CodY helix-turn-helix domain LIO33_RS01685 PF06018 CodY GAF-like domain LIO33_RS01690 PF00857 Isochorismatase family LIO33_RS01695 PF01245 Ribosomal protein L19 LIO33_RS01705 PF02686 Glu-tRNAGln amidotransferase C subunit LIO33_RS01710 PF01425 Amidase LIO33_RS01715 PF02637 GatB domain LIO33_RS01715 PF02934 GatB/GatE catalytic domain LIO33_RS01720 PF01966 HD domain LIO33_RS01720 PF13286 Phosphohydrolase-associated domain LIO33_RS01725 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS01730 PF10509 Galactokinase galactose-binding signature LIO33_RS01730 PF08544 GHMP kinases C terminal LIO33_RS01730 PF00288 GHMP kinases N terminal domain LIO33_RS01735 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LIO33_RS01735 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LIO33_RS01740 PF00892 EamA-like transporter family LIO33_RS01745 PF03932 CutC family LIO33_RS01755 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS01760 PF01926 50S ribosome-binding GTPase LIO33_RS01765 PF01985 CRS1 / YhbY (CRM) domain LIO33_RS01770 PF01467 Cytidylyltransferase-like LIO33_RS01775 PF01966 HD domain LIO33_RS01800 PF13649 Methyltransferase domain LIO33_RS01805 PF07693 KAP family P-loop domain LIO33_RS01810 PF07693 KAP family P-loop domain LIO33_RS01815 PF05636 HIGH Nucleotidyl Transferase LIO33_RS01820 PF13411 MerR HTH family regulatory protein LIO33_RS01820 PF07739 TipAS antibiotic-recognition domain LIO33_RS01825 PF00350 Dynamin family LIO33_RS01845 PF01327 Polypeptide deformylase LIO33_RS01850 PF07724 AAA domain (Cdc48 subfamily) LIO33_RS01850 PF17871 AAA lid domain LIO33_RS01850 PF10431 C-terminal, D2-small domain, of ClpB protein LIO33_RS01850 PF00004 ATPase family associated with various cellular activities (AAA) LIO33_RS01855 PF02446 4-alpha-glucanotransferase LIO33_RS01860 PF00343 Carbohydrate phosphorylase LIO33_RS01870 PF03372 Endonuclease/Exonuclease/phosphatase family LIO33_RS01875 PF00367 phosphotransferase system, EIIB LIO33_RS01875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIO33_RS01875 PF02378 Phosphotransferase system, EIIC LIO33_RS01890 PF01709 Transcriptional regulator LIO33_RS01900 PF07155 ECF-type riboflavin transporter, S component LIO33_RS01910 PF17773 UPF0176 acylphosphatase like domain LIO33_RS01910 PF12368 Rhodanase C-terminal LIO33_RS01910 PF00581 Rhodanese-like domain LIO33_RS01920 PF00005 ABC transporter LIO33_RS01920 PF12558 ATP-binding cassette cobalt transporter LIO33_RS01930 PF00313 'Cold-shock' DNA-binding domain LIO33_RS01935 PF02527 rRNA small subunit methyltransferase G LIO33_RS01940 PF00912 Transglycosylase LIO33_RS01940 PF00905 Penicillin binding protein transpeptidase domain LIO33_RS01945 PF03838 Recombination protein U LIO33_RS01950 PF06908 YspA SLOG family LIO33_RS01955 PF05103 DivIVA protein LIO33_RS01965 PF02926 THUMP domain LIO33_RS01965 PF01170 Putative RNA methylase family UPF0020 LIO33_RS01970 PF18708 MapZ extracellular C-terminal domain 2 LIO33_RS01970 PF18041 MapZ extracellular domain 1 LIO33_RS01975 PF02664 S-Ribosylhomocysteinase (LuxS) LIO33_RS01980 PF01966 HD domain LIO33_RS01980 PF00013 KH domain LIO33_RS01980 PF12072 Domain of unknown function (DUF3552) LIO33_RS01985 PF00625 Guanylate kinase LIO33_RS01990 PF01192 RNA polymerase Rpb6 LIO33_RS01995 PF04851 Type III restriction enzyme, res subunit LIO33_RS01995 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LIO33_RS01995 PF18074 Primosomal protein N C-terminal domain LIO33_RS01995 PF17764 3′ DNA-binding domain (3′BD) LIO33_RS01995 PF00271 Helicase conserved C-terminal domain LIO33_RS02000 PF00551 Formyl transferase LIO33_RS02000 PF02911 Formyl transferase, C-terminal domain LIO33_RS02005 PF01029 NusB family LIO33_RS02005 PF01189 16S rRNA methyltransferase RsmB/F LIO33_RS02015 PF00069 Protein kinase domain LIO33_RS02015 PF03793 PASTA domain LIO33_RS02025 PF07730 Histidine kinase LIO33_RS02025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS02030 PF00196 Bacterial regulatory proteins, luxR family LIO33_RS02030 PF00072 Response regulator receiver domain LIO33_RS02035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIO33_RS02040 PF00575 S1 RNA binding domain LIO33_RS02045 PF00291 Pyridoxal-phosphate dependent enzyme LIO33_RS02050 PF09186 Domain of unknown function (DUF1949) LIO33_RS02050 PF01205 Uncharacterized protein family UPF0029 LIO33_RS02055 PF00271 Helicase conserved C-terminal domain LIO33_RS02055 PF04851 Type III restriction enzyme, res subunit LIO33_RS02065 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LIO33_RS02065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LIO33_RS02140 PF01938 TRAM domain LIO33_RS02140 PF05958 tRNA (Uracil-5-)-methyltransferase LIO33_RS02145 PF02631 RecX family LIO33_RS02150 PF04167 Protein of unknown function (DUF402) LIO33_RS02160 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS02160 PF07702 UTRA domain LIO33_RS02165 PF07702 UTRA domain LIO33_RS02165 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS02170 PF01301 Glycosyl hydrolases family 35 LIO33_RS02175 PF03830 PTS system sorbose subfamily IIB component LIO33_RS02185 PF03613 PTS system mannose/fructose/sorbose family IID component LIO33_RS02195 PF01263 Aldose 1-epimerase LIO33_RS02220 PF10458 Valyl tRNA synthetase tRNA binding arm LIO33_RS02220 PF00133 tRNA synthetases class I (I, L, M and V) LIO33_RS02220 PF08264 Anticodon-binding domain of tRNA LIO33_RS02245 PF03590 Aspartate-ammonia ligase LIO33_RS02250 PF14492 Elongation Factor G, domain II LIO33_RS02250 PF00679 Elongation factor G C-terminus LIO33_RS02250 PF03144 Elongation factor Tu domain 2 LIO33_RS02250 PF00009 Elongation factor Tu GTP binding domain LIO33_RS02265 PF10502 Signal peptidase, peptidase S26 LIO33_RS02275 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) LIO33_RS02275 PF07581 The GLUG motif LIO33_RS02295 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS02295 PF08245 Mur ligase middle domain LIO33_RS02300 PF03033 Glycosyltransferase family 28 N-terminal domain LIO33_RS02300 PF04101 Glycosyltransferase family 28 C-terminal domain LIO33_RS02305 PF08478 POTRA domain, FtsQ-type LIO33_RS02310 PF02491 SHS2 domain inserted in FTSA LIO33_RS02310 PF11983 Membrane-attachment and polymerisation-promoting switch LIO33_RS02315 PF00091 Tubulin/FtsZ family, GTPase domain LIO33_RS02315 PF12327 FtsZ family, C-terminal domain LIO33_RS02320 PF01168 Alanine racemase, N-terminal domain LIO33_RS02325 PF04472 Cell division protein SepF LIO33_RS02340 PF05103 DivIVA protein LIO33_RS02350 PF08264 Anticodon-binding domain of tRNA LIO33_RS02350 PF00133 tRNA synthetases class I (I, L, M and V) LIO33_RS02360 PF00300 Histidine phosphatase superfamily (branch 1) LIO33_RS02360 PF00293 NUDIX domain LIO33_RS02365 PF00004 ATPase family associated with various cellular activities (AAA) LIO33_RS02365 PF07724 AAA domain (Cdc48 subfamily) LIO33_RS02365 PF17871 AAA lid domain LIO33_RS02365 PF10431 C-terminal, D2-small domain, of ClpB protein LIO33_RS02370 PF08796 Protein of unknown function (DUF1797) LIO33_RS02375 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS02380 PF00005 ABC transporter LIO33_RS02385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIO33_RS02385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIO33_RS02395 PF10502 Signal peptidase, peptidase S26 LIO33_RS02420 PF13411 MerR HTH family regulatory protein LIO33_RS02435 PF01136 Peptidase family U32 LIO33_RS02435 PF16325 Peptidase family U32 C-terminal domain LIO33_RS02445 PF02229 Transcriptional Coactivator p15 (PC4) LIO33_RS02450 PF02632 BioY family LIO33_RS02455 PF04199 Putative cyclase LIO33_RS02460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS02460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS02465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LIO33_RS02470 PF00005 ABC transporter LIO33_RS02475 PF12704 MacB-like periplasmic core domain LIO33_RS02475 PF02687 FtsX-like permease family LIO33_RS02485 PF01336 OB-fold nucleic acid binding domain LIO33_RS02485 PF00152 tRNA synthetases class II (D, K and N) LIO33_RS02495 PF04073 Aminoacyl-tRNA editing domain LIO33_RS02505 PF09515 Thiamine transporter protein (Thia_YuaJ) LIO33_RS02525 PF01098 Cell cycle protein LIO33_RS02530 PF00311 Phosphoenolpyruvate carboxylase LIO33_RS02535 PF04542 Sigma-70 region 2 LIO33_RS02535 PF08281 Sigma-70, region 4 LIO33_RS02545 PF00009 Elongation factor Tu GTP binding domain LIO33_RS02545 PF03143 Elongation factor Tu C-terminal domain LIO33_RS02545 PF03144 Elongation factor Tu domain 2 LIO33_RS02550 PF00121 Triosephosphate isomerase LIO33_RS02560 PF01966 HD domain LIO33_RS02575 PF00665 Integrase core domain LIO33_RS02575 PF13936 Helix-turn-helix domain LIO33_RS02580 PF00962 Adenosine/AMP deaminase LIO33_RS02590 PF00005 ABC transporter LIO33_RS02595 PF07702 UTRA domain LIO33_RS02595 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS02600 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIO33_RS02600 PF14579 Helix-hairpin-helix motif LIO33_RS02600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIO33_RS02600 PF01336 OB-fold nucleic acid binding domain LIO33_RS02600 PF02811 PHP domain LIO33_RS02605 PF00365 Phosphofructokinase LIO33_RS02610 PF02887 Pyruvate kinase, alpha/beta domain LIO33_RS02610 PF00224 Pyruvate kinase, barrel domain LIO33_RS02615 PF09028 Mac 1 LIO33_RS02620 PF01266 FAD dependent oxidoreductase LIO33_RS02625 PF07859 alpha/beta hydrolase fold LIO33_RS02625 PF13472 GDSL-like Lipase/Acylhydrolase family LIO33_RS02630 PF10502 Signal peptidase, peptidase S26 LIO33_RS02635 PF01380 SIS domain LIO33_RS02640 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS02645 PF00005 ABC transporter LIO33_RS02650 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS02665 PF00753 Metallo-beta-lactamase superfamily LIO33_RS02670 PF13307 Helicase C-terminal domain LIO33_RS02670 PF00929 Exonuclease LIO33_RS02675 PF00696 Amino acid kinase family LIO33_RS02675 PF01472 PUA domain LIO33_RS02680 PF00171 Aldehyde dehydrogenase family LIO33_RS02685 PF03807 NADP oxidoreductase coenzyme F420-dependent LIO33_RS02685 PF14748 Pyrroline-5-carboxylate reductase dimerisation LIO33_RS02695 PF02645 Uncharacterised protein, DegV family COG1307 LIO33_RS02700 PF00155 Aminotransferase class I and II LIO33_RS02700 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS02705 PF03883 Peroxide stress protein YaaA LIO33_RS02715 PF02706 Chain length determinant protein LIO33_RS02720 PF13614 AAA domain LIO33_RS02730 PF02397 Bacterial sugar transferase LIO33_RS02750 PF01501 Glycosyl transferase family 8 LIO33_RS02750 PF00535 Glycosyl transferase family 2 LIO33_RS02755 PF01501 Glycosyl transferase family 8 LIO33_RS02755 PF00535 Glycosyl transferase family 2 LIO33_RS02760 PF00535 Glycosyl transferase family 2 LIO33_RS02760 PF01501 Glycosyl transferase family 8 LIO33_RS02790 PF03102 NeuB family LIO33_RS02790 PF08666 SAF domain LIO33_RS02795 PF02350 UDP-N-acetylglucosamine 2-epimerase LIO33_RS02805 PF02348 Cytidylyltransferase LIO33_RS02805 PF13472 GDSL-like Lipase/Acylhydrolase family LIO33_RS02870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIO33_RS02875 PF01202 Shikimate kinase LIO33_RS02880 PF00800 Prephenate dehydratase LIO33_RS02885 PF03816 Cell envelope-related transcriptional attenuator domain LIO33_RS02890 PF05958 tRNA (Uracil-5-)-methyltransferase LIO33_RS02900 PF03275 UDP-galactopyranose mutase LIO33_RS02905 PF02525 Flavodoxin-like fold LIO33_RS02925 PF00155 Aminotransferase class I and II LIO33_RS02930 PF01336 OB-fold nucleic acid binding domain LIO33_RS02930 PF00152 tRNA synthetases class II (D, K and N) LIO33_RS02945 PF01554 MatE LIO33_RS02950 PF01042 Endoribonuclease L-PSP LIO33_RS02955 PF03668 P-loop ATPase protein family LIO33_RS02960 PF01933 Uncharacterised protein family UPF0052 LIO33_RS02965 PF02650 WhiA C-terminal HTH domain LIO33_RS02965 PF14527 WhiA LAGLIDADG-like domain LIO33_RS02965 PF10298 WhiA N-terminal LAGLIDADG-like domain LIO33_RS02980 PF13673 Acetyltransferase (GNAT) domain LIO33_RS02985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIO33_RS02985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIO33_RS02990 PF00696 Amino acid kinase family LIO33_RS02995 PF03606 C4-dicarboxylate anaerobic carrier LIO33_RS03000 PF01546 Peptidase family M20/M25/M40 LIO33_RS03015 PF01316 Arginine repressor, DNA binding domain LIO33_RS03015 PF02863 Arginine repressor, C-terminal domain LIO33_RS03020 PF02547 Queuosine biosynthesis protein LIO33_RS03025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LIO33_RS03055 PF13193 AMP-binding enzyme C-terminal domain LIO33_RS03055 PF00501 AMP-binding enzyme LIO33_RS03060 PF03062 MBOAT, membrane-bound O-acyltransferase family LIO33_RS03065 PF00550 Phosphopantetheine attachment site LIO33_RS03070 PF04914 DltD protein LIO33_RS03080 PF13409 Glutathione S-transferase, N-terminal domain LIO33_RS03085 PF01479 S4 domain LIO33_RS03085 PF00849 RNA pseudouridylate synthase LIO33_RS03090 PF00255 Glutathione peroxidase LIO33_RS03095 PF01032 FecCD transport family LIO33_RS03100 PF01032 FecCD transport family LIO33_RS03105 PF01497 Periplasmic binding protein LIO33_RS03110 PF00005 ABC transporter LIO33_RS03115 PF08245 Mur ligase middle domain LIO33_RS03115 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS03120 PF01553 Acyltransferase LIO33_RS03125 PF10531 SLBB domain LIO33_RS03130 PF00753 Metallo-beta-lactamase superfamily LIO33_RS03130 PF13567 Domain of unknown function (DUF4131) LIO33_RS03130 PF03772 Competence protein LIO33_RS03140 PF00571 CBS domain LIO33_RS03155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIO33_RS03155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIO33_RS03160 PF02223 Thymidylate kinase LIO33_RS03165 PF09115 DNA polymerase III, delta subunit, C terminal LIO33_RS03170 PF06156 Initiation control protein YabA LIO33_RS03175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LIO33_RS03180 PF00266 Aminotransferase class-V LIO33_RS03190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIO33_RS03190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LIO33_RS03190 PF01842 ACT domain LIO33_RS03195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LIO33_RS03195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LIO33_RS03200 PF03960 ArsC family LIO33_RS03210 PF03372 Endonuclease/Exonuclease/phosphatase family LIO33_RS03220 PF13520 Amino acid permease LIO33_RS03255 PF08774 VRR-NUC domain LIO33_RS03255 PF04851 Type III restriction enzyme, res subunit LIO33_RS03265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIO33_RS03265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIO33_RS03265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIO33_RS03265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIO33_RS03270 PF12822 ECF transporter, substrate-specific component LIO33_RS03275 PF02441 Flavoprotein LIO33_RS03280 PF02441 Flavoprotein LIO33_RS03280 PF04127 DNA / pantothenate metabolism flavoprotein LIO33_RS03285 PF01268 Formate--tetrahydrofolate ligase LIO33_RS03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS03295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS03300 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LIO33_RS03300 PF11867 Domain of unknown function (DUF3387) LIO33_RS03300 PF18766 SWI2/SNF2 ATPase LIO33_RS03310 PF01420 Type I restriction modification DNA specificity domain LIO33_RS03345 PF04055 Radical SAM superfamily LIO33_RS03350 PF00455 DeoR C terminal sensor domain LIO33_RS03350 PF08220 DeoR-like helix-turn-helix domain LIO33_RS03355 PF13936 Helix-turn-helix domain LIO33_RS03355 PF04198 Putative sugar-binding domain LIO33_RS03360 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIO33_RS03365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS03370 PF02378 Phosphotransferase system, EIIC LIO33_RS03375 PF02901 Pyruvate formate lyase-like LIO33_RS03375 PF01228 Glycine radical LIO33_RS03380 PF00923 Transaldolase/Fructose-6-phosphate aldolase LIO33_RS03390 PF00465 Iron-containing alcohol dehydrogenase LIO33_RS03395 PF01118 Semialdehyde dehydrogenase, NAD binding domain LIO33_RS03395 PF02774 Semialdehyde dehydrogenase, dimerisation domain LIO33_RS03400 PF00701 Dihydrodipicolinate synthetase family LIO33_RS03405 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS03405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS03415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LIO33_RS03415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LIO33_RS03420 PF01266 FAD dependent oxidoreductase LIO33_RS03420 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LIO33_RS03425 PF00230 Major intrinsic protein LIO33_RS03430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIO33_RS03440 PF01432 Peptidase family M3 LIO33_RS03440 PF08439 Oligopeptidase F LIO33_RS03450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS03450 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS03455 PF13361 UvrD-like helicase C-terminal domain LIO33_RS03455 PF00580 UvrD/REP helicase N-terminal domain LIO33_RS03465 PF08543 Phosphomethylpyrimidine kinase LIO33_RS03470 PF02110 Hydroxyethylthiazole kinase family LIO33_RS03475 PF02581 Thiamine monophosphate synthase LIO33_RS03485 PF01048 Phosphorylase superfamily LIO33_RS03495 PF02361 Cobalt transport protein LIO33_RS03500 PF00005 ABC transporter LIO33_RS03505 PF00005 ABC transporter LIO33_RS03510 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS03540 PF00005 ABC transporter LIO33_RS03545 PF08459 UvrC Helix-hairpin-helix N-terminal LIO33_RS03545 PF01541 GIY-YIG catalytic domain LIO33_RS03545 PF02151 UvrB/uvrC motif LIO33_RS03555 PF09269 Domain of unknown function (DUF1967) LIO33_RS03555 PF01018 GTP1/OBG LIO33_RS03555 PF01926 50S ribosome-binding GTPase LIO33_RS03565 PF00746 LPXTG cell wall anchor motif LIO33_RS03565 PF06458 MucBP domain LIO33_RS03565 PF04650 YSIRK type signal peptide LIO33_RS03570 PF12705 PD-(D/E)XK nuclease superfamily LIO33_RS03575 PF12705 PD-(D/E)XK nuclease superfamily LIO33_RS03575 PF13361 UvrD-like helicase C-terminal domain LIO33_RS03575 PF00580 UvrD/REP helicase N-terminal domain LIO33_RS03580 PF02660 Glycerol-3-phosphate acyltransferase LIO33_RS03585 PF00204 DNA gyrase B LIO33_RS03585 PF01751 Toprim domain LIO33_RS03585 PF00986 DNA gyrase B subunit, carboxyl terminus LIO33_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS03610 PF03989 DNA gyrase C-terminal domain, beta-propeller LIO33_RS03610 PF00521 DNA gyrase/topoisomerase IV, subunit A LIO33_RS03620 PF01063 Amino-transferase class IV LIO33_RS03640 PF00575 S1 RNA binding domain LIO33_RS03665 PF00266 Aminotransferase class-V LIO33_RS03670 PF02568 Thiamine biosynthesis protein (ThiI) LIO33_RS03670 PF02926 THUMP domain LIO33_RS03675 PF05525 Branched-chain amino acid transport protein LIO33_RS03680 PF00829 Ribosomal prokaryotic L21 protein LIO33_RS03685 PF01016 Ribosomal L27 protein LIO33_RS03695 PF03466 LysR substrate binding domain LIO33_RS03695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIO33_RS03700 PF01252 Signal peptidase (SPase) II LIO33_RS03705 PF01479 S4 domain LIO33_RS03705 PF00849 RNA pseudouridylate synthase LIO33_RS03710 PF08274 PhnA Zinc-Ribbon LIO33_RS03710 PF03831 PhnA domain LIO33_RS03720 PF00156 Phosphoribosyl transferase domain LIO33_RS03725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LIO33_RS03725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LIO33_RS03730 PF00117 Glutamine amidotransferase class-I LIO33_RS03730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LIO33_RS03735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIO33_RS03735 PF02142 MGS-like domain LIO33_RS03735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LIO33_RS03740 PF04445 Putative SAM-dependent methyltransferase LIO33_RS03745 PF01470 Pyroglutamyl peptidase LIO33_RS03755 PF00886 Ribosomal protein S16 LIO33_RS03765 PF00664 ABC transporter transmembrane region LIO33_RS03765 PF00005 ABC transporter LIO33_RS03770 PF00664 ABC transporter transmembrane region LIO33_RS03770 PF00005 ABC transporter LIO33_RS03775 PF01522 Polysaccharide deacetylase LIO33_RS03780 PF00742 Homoserine dehydrogenase LIO33_RS03780 PF03447 Homoserine dehydrogenase, NAD binding domain LIO33_RS03785 PF08544 GHMP kinases C terminal LIO33_RS03785 PF00288 GHMP kinases N terminal domain LIO33_RS03790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LIO33_RS03790 PF01565 FAD binding domain LIO33_RS03795 PF08402 TOBE domain LIO33_RS03795 PF00005 ABC transporter LIO33_RS03800 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS03805 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS03810 PF13416 Bacterial extracellular solute-binding protein LIO33_RS03815 PF00654 Voltage gated chloride channel LIO33_RS03825 PF06280 Fn3-like domain LIO33_RS03825 PF02225 PA domain LIO33_RS03825 PF00082 Subtilase family LIO33_RS03830 PF01256 Carbohydrate kinase LIO33_RS03835 PF00633 Helix-hairpin-helix motif LIO33_RS03835 PF00730 HhH-GPD superfamily base excision DNA repair protein LIO33_RS03835 PF10576 Iron-sulfur binding domain of endonuclease III LIO33_RS03840 PF00478 IMP dehydrogenase / GMP reductase domain LIO33_RS03850 PF01782 RimM N-terminal domain LIO33_RS03850 PF05239 PRC-barrel domain LIO33_RS03855 PF01746 tRNA (Guanine-1)-methyltransferase LIO33_RS03860 PF00155 Aminotransferase class I and II LIO33_RS03865 PF00455 DeoR C terminal sensor domain LIO33_RS03865 PF08220 DeoR-like helix-turn-helix domain LIO33_RS03870 PF00294 pfkB family carbohydrate kinase LIO33_RS03875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIO33_RS03875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS03885 PF02645 Uncharacterised protein, DegV family COG1307 LIO33_RS03890 PF01113 Dihydrodipicolinate reductase, N-terminus LIO33_RS03890 PF05173 Dihydrodipicolinate reductase, C-terminus LIO33_RS03895 PF13735 tRNA nucleotidyltransferase domain 2 putative LIO33_RS03895 PF12627 Probable RNA and SrmB- binding site of polymerase A LIO33_RS03895 PF01743 Poly A polymerase head domain LIO33_RS03900 PF00005 ABC transporter LIO33_RS03900 PF16326 ABC transporter C-terminal domain LIO33_RS03900 PF12848 ABC transporter LIO33_RS03910 PF00480 ROK family LIO33_RS03925 PF00303 Thymidylate synthase LIO33_RS03930 PF00186 Dihydrofolate reductase LIO33_RS03935 PF07724 AAA domain (Cdc48 subfamily) LIO33_RS03935 PF10431 C-terminal, D2-small domain, of ClpB protein LIO33_RS03935 PF06689 ClpX C4-type zinc finger LIO33_RS03940 PF01926 50S ribosome-binding GTPase LIO33_RS03945 PF00334 Nucleoside diphosphate kinase LIO33_RS03955 PF14492 Elongation Factor G, domain II LIO33_RS03955 PF00009 Elongation factor Tu GTP binding domain LIO33_RS03955 PF03144 Elongation factor Tu domain 2 LIO33_RS03955 PF06421 GTP-binding protein LepA C-terminus LIO33_RS03955 PF00679 Elongation factor G C-terminus LIO33_RS03960 PF01361 Tautomerase enzyme LIO33_RS03970 PF00265 Thymidine kinase LIO33_RS03975 PF03462 PCRF domain LIO33_RS03975 PF00472 RF-1 domain LIO33_RS03980 PF05175 Methyltransferase small domain LIO33_RS03985 PF01300 Telomere recombination LIO33_RS03985 PF03481 Putative GTP-binding controlling metal-binding LIO33_RS03995 PF00464 Serine hydroxymethyltransferase LIO33_RS04010 PF00106 short chain dehydrogenase LIO33_RS04040 PF00117 Glutamine amidotransferase class-I LIO33_RS04040 PF00958 GMP synthase C terminal domain LIO33_RS04040 PF02540 NAD synthase LIO33_RS04045 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS04045 PF07702 UTRA domain LIO33_RS04050 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LIO33_RS04055 PF02978 Signal peptide binding domain LIO33_RS04055 PF02881 SRP54-type protein, helical bundle domain LIO33_RS04055 PF00448 SRP54-type protein, GTPase domain LIO33_RS04080 PF00589 Phage integrase family LIO33_RS04080 PF13495 Phage integrase, N-terminal SAM-like domain LIO33_RS04085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIO33_RS04085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIO33_RS04085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIO33_RS04085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIO33_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS04090 PF00512 His Kinase A (phospho-acceptor) domain LIO33_RS04095 PF00072 Response regulator receiver domain LIO33_RS04095 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS04115 PF00005 ABC transporter LIO33_RS04130 PF00005 ABC transporter LIO33_RS04155 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase LIO33_RS04155 PF00756 Putative esterase LIO33_RS04165 PF06445 GyrI-like small molecule binding domain LIO33_RS04165 PF12833 Helix-turn-helix domain LIO33_RS04170 PF01134 Glucose inhibited division protein A LIO33_RS04175 PF13344 Haloacid dehalogenase-like hydrolase LIO33_RS04180 PF00542 Ribosomal protein L7/L12 C-terminal domain LIO33_RS04180 PF16320 Ribosomal protein L7/L12 dimerisation domain LIO33_RS04185 PF00466 Ribosomal protein L10 LIO33_RS04190 PF01751 Toprim domain LIO33_RS04190 PF01131 DNA topoisomerase LIO33_RS04190 PF01396 Topoisomerase DNA binding C4 zinc finger LIO33_RS04195 PF18255 DNA processing protein A sterile alpha motif domain LIO33_RS04195 PF02481 DNA recombination-mediator protein A LIO33_RS04200 PF14602 Hexapeptide repeat of succinyl-transferase LIO33_RS04200 PF12464 Maltose acetyltransferase LIO33_RS04205 PF02583 Metal-sensitive transcriptional repressor LIO33_RS04210 PF00581 Rhodanese-like domain LIO33_RS04215 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS04215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS04225 PF03006 Haemolysin-III related LIO33_RS04235 PF01351 Ribonuclease HII LIO33_RS04240 PF01926 50S ribosome-binding GTPase LIO33_RS04255 PF02872 5'-nucleotidase, C-terminal domain LIO33_RS04255 PF00149 Calcineurin-like phosphoesterase LIO33_RS04260 PF01979 Amidohydrolase family LIO33_RS04265 PF03167 Uracil DNA glycosylase superfamily LIO33_RS04270 PF00535 Glycosyl transferase family 2 LIO33_RS04275 PF00156 Phosphoribosyl transferase domain LIO33_RS04280 PF00719 Inorganic pyrophosphatase LIO33_RS04285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIO33_RS04290 PF01180 Dihydroorotate dehydrogenase LIO33_RS04295 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LIO33_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LIO33_RS04300 PF03466 LysR substrate binding domain LIO33_RS04305 PF00483 Nucleotidyl transferase LIO33_RS04310 PF00132 Bacterial transferase hexapeptide (six repeats) LIO33_RS04310 PF00483 Nucleotidyl transferase LIO33_RS04315 PF08323 Starch synthase catalytic domain LIO33_RS04315 PF00534 Glycosyl transferases group 1 LIO33_RS04320 PF02806 Alpha amylase, C-terminal all-beta domain LIO33_RS04320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIO33_RS04320 PF00128 Alpha amylase, catalytic domain LIO33_RS04325 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS04330 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS04335 PF00293 NUDIX domain LIO33_RS04345 PF07501 G5 domain LIO33_RS04345 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region LIO33_RS04345 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region LIO33_RS04345 PF04650 YSIRK type signal peptide LIO33_RS04350 PF17757 UvrB interaction domain LIO33_RS04350 PF00271 Helicase conserved C-terminal domain LIO33_RS04350 PF04851 Type III restriction enzyme, res subunit LIO33_RS04350 PF02151 UvrB/uvrC motif LIO33_RS04350 PF12344 Ultra-violet resistance protein B LIO33_RS04360 PF04851 Type III restriction enzyme, res subunit LIO33_RS04360 PF02151 UvrB/uvrC motif LIO33_RS04360 PF12344 Ultra-violet resistance protein B LIO33_RS04360 PF17757 UvrB interaction domain LIO33_RS04360 PF00271 Helicase conserved C-terminal domain LIO33_RS04365 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS04370 PF00005 ABC transporter LIO33_RS04380 PF00005 ABC transporter LIO33_RS04380 PF16326 ABC transporter C-terminal domain LIO33_RS04380 PF12848 ABC transporter LIO33_RS04385 PF01053 Cys/Met metabolism PLP-dependent enzyme LIO33_RS04400 PF01263 Aldose 1-epimerase LIO33_RS04405 PF00232 Glycosyl hydrolase family 1 LIO33_RS04410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS04410 PF02378 Phosphotransferase system, EIIC LIO33_RS04415 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIO33_RS04420 PF00874 PRD domain LIO33_RS04420 PF03123 CAT RNA binding domain LIO33_RS04425 PF01791 DeoC/LacD family aldolase LIO33_RS04435 PF02502 Ribose/Galactose Isomerase LIO33_RS04440 PF02502 Ribose/Galactose Isomerase LIO33_RS04445 PF00455 DeoR C terminal sensor domain LIO33_RS04445 PF08220 DeoR-like helix-turn-helix domain LIO33_RS04475 PF01381 Helix-turn-helix LIO33_RS04475 PF08671 Anti-repressor SinI LIO33_RS04480 PF14815 NUDIX domain LIO33_RS04480 PF00730 HhH-GPD superfamily base excision DNA repair protein LIO33_RS04490 PF00005 ABC transporter LIO33_RS04490 PF00664 ABC transporter transmembrane region LIO33_RS04495 PF00664 ABC transporter transmembrane region LIO33_RS04495 PF00005 ABC transporter LIO33_RS04500 PF01515 Phosphate acetyl/butaryl transferase LIO33_RS04505 PF00849 RNA pseudouridylate synthase LIO33_RS04510 PF01513 ATP-NAD kinase LIO33_RS04515 PF04607 Region found in RelA / SpoT proteins LIO33_RS04520 PF01928 CYTH domain LIO33_RS04525 PF14572 Phosphoribosyl synthetase-associated domain LIO33_RS04525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LIO33_RS04530 PF00266 Aminotransferase class-V LIO33_RS04545 PF02629 CoA binding domain LIO33_RS04545 PF06971 Putative DNA-binding protein N-terminus LIO33_RS04550 PF07722 Peptidase C26 LIO33_RS04555 PF04002 RadC-like JAB domain LIO33_RS04560 PF04203 Sortase domain LIO33_RS04565 PF00521 DNA gyrase/topoisomerase IV, subunit A LIO33_RS04565 PF03989 DNA gyrase C-terminal domain, beta-propeller LIO33_RS04570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LIO33_RS04570 PF00056 lactate/malate dehydrogenase, NAD binding domain LIO33_RS04575 PF01872 RibD C-terminal domain LIO33_RS04580 PF01872 RibD C-terminal domain LIO33_RS04585 PF02653 Branched-chain amino acid transport system / permease component LIO33_RS04590 PF02653 Branched-chain amino acid transport system / permease component LIO33_RS04595 PF00005 ABC transporter LIO33_RS04600 PF02608 ABC transporter substrate-binding protein PnrA-like LIO33_RS04605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIO33_RS04610 PF01791 DeoC/LacD family aldolase LIO33_RS04615 PF00591 Glycosyl transferase family, a/b domain LIO33_RS04615 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LIO33_RS04615 PF02885 Glycosyl transferase family, helical bundle domain LIO33_RS04620 PF05175 Methyltransferase small domain LIO33_RS04625 PF00485 Phosphoribulokinase / Uridine kinase family LIO33_RS04630 PF01649 Ribosomal protein S20 LIO33_RS04635 PF01797 Transposase IS200 like LIO33_RS04645 PF00512 His Kinase A (phospho-acceptor) domain LIO33_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS04650 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS04650 PF00072 Response regulator receiver domain LIO33_RS04665 PF01895 PhoU domain LIO33_RS04670 PF00005 ABC transporter LIO33_RS04675 PF00005 ABC transporter LIO33_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS04690 PF12849 PBP superfamily domain LIO33_RS04695 PF17126 RsmF rRNA methyltransferase first C-terminal domain LIO33_RS04695 PF01189 16S rRNA methyltransferase RsmB/F LIO33_RS04695 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LIO33_RS04700 PF00459 Inositol monophosphatase family LIO33_RS04705 PF05256 Uncharacterised protein family (UPF0223) LIO33_RS04710 PF03960 ArsC family LIO33_RS04715 PF07885 Ion channel LIO33_RS04720 PF06574 FAD synthetase LIO33_RS04720 PF01687 Riboflavin kinase LIO33_RS04725 PF16198 tRNA pseudouridylate synthase B C-terminal domain LIO33_RS04725 PF01509 TruB family pseudouridylate synthase (N terminal domain) LIO33_RS04785 PF07687 Peptidase dimerisation domain LIO33_RS04785 PF01546 Peptidase family M20/M25/M40 LIO33_RS04820 PF06993 Protein of unknown function (DUF1304) LIO33_RS04825 PF01047 MarR family LIO33_RS04840 PF01545 Cation efflux family LIO33_RS04840 PF16916 Dimerisation domain of Zinc Transporter LIO33_RS04850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LIO33_RS04855 PF02152 Dihydroneopterin aldolase LIO33_RS04860 PF00809 Pterin binding enzyme LIO33_RS04865 PF01227 GTP cyclohydrolase I LIO33_RS04870 PF00293 NUDIX domain LIO33_RS04895 PF03483 B3/4 domain LIO33_RS04895 PF03484 tRNA synthetase B5 domain LIO33_RS04895 PF03147 Ferredoxin-fold anticodon binding domain LIO33_RS04895 PF01588 Putative tRNA binding domain LIO33_RS04895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LIO33_RS04900 PF13673 Acetyltransferase (GNAT) domain LIO33_RS04905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LIO33_RS04905 PF01409 tRNA synthetases class II core domain (F) LIO33_RS04910 PF00933 Glycosyl hydrolase family 3 N terminal domain LIO33_RS04915 PF00933 Glycosyl hydrolase family 3 N terminal domain LIO33_RS04925 PF00106 short chain dehydrogenase LIO33_RS04930 PF03786 D-mannonate dehydratase (UxuA) LIO33_RS04935 PF02614 Glucuronate isomerase LIO33_RS04940 PF01081 KDPG and KHG aldolase LIO33_RS04945 PF07729 FCD domain LIO33_RS04945 PF00392 Bacterial regulatory proteins, gntR family LIO33_RS04950 PF00703 Glycosyl hydrolases family 2 LIO33_RS04950 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LIO33_RS04950 PF02837 Glycosyl hydrolases family 2, sugar binding domain LIO33_RS04955 PF00294 pfkB family carbohydrate kinase LIO33_RS04965 PF01223 DNA/RNA non-specific endonuclease LIO33_RS04970 PF11772 DNA-directed RNA polymerase subunit beta LIO33_RS04975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIO33_RS04985 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LIO33_RS04985 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LIO33_RS04990 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIO33_RS04990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIO33_RS04995 PF00231 ATP synthase LIO33_RS05000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LIO33_RS05000 PF00306 ATP synthase alpha/beta chain, C terminal domain LIO33_RS05000 PF02874 ATP synthase alpha/beta family, beta-barrel domain LIO33_RS05005 PF00213 ATP synthase delta (OSCP) subunit LIO33_RS05010 PF00430 ATP synthase B/B' CF(0) LIO33_RS05015 PF00119 ATP synthase A chain LIO33_RS05020 PF00137 ATP synthase subunit C LIO33_RS05025 PF00781 Diacylglycerol kinase catalytic domain LIO33_RS05030 PF01653 NAD-dependent DNA ligase adenylation domain LIO33_RS05030 PF03120 NAD-dependent DNA ligase OB-fold domain LIO33_RS05030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LIO33_RS05030 PF12826 Helix-hairpin-helix motif LIO33_RS05030 PF00533 BRCA1 C Terminus (BRCT) domain LIO33_RS05040 PF03773 Predicted permease LIO33_RS05045 PF09323 Domain of unknown function (DUF1980) LIO33_RS05050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LIO33_RS05050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LIO33_RS05065 PF00448 SRP54-type protein, GTPase domain LIO33_RS05065 PF02881 SRP54-type protein, helical bundle domain LIO33_RS05080 PF06470 SMC proteins Flexible Hinge Domain LIO33_RS05080 PF02463 RecF/RecN/SMC N terminal domain LIO33_RS05085 PF00035 Double-stranded RNA binding motif LIO33_RS05085 PF14622 Ribonuclease-III-like LIO33_RS05105 PF13936 Helix-turn-helix domain LIO33_RS05105 PF00665 Integrase core domain LIO33_RS05110 PF08903 Domain of unknown function (DUF1846) LIO33_RS05115 PF02896 PEP-utilising enzyme, TIM barrel domain LIO33_RS05115 PF00391 PEP-utilising enzyme, mobile domain LIO33_RS05115 PF05524 PEP-utilising enzyme, N-terminal LIO33_RS05120 PF00381 PTS HPr component phosphorylation site LIO33_RS05125 PF00180 Isocitrate/isopropylmalate dehydrogenase LIO33_RS05130 PF00285 Citrate synthase, C-terminal domain LIO33_RS05135 PF00330 Aconitase family (aconitate hydratase) LIO33_RS05135 PF00694 Aconitase C-terminal domain LIO33_RS05140 PF00462 Glutaredoxin LIO33_RS05145 PF00317 Ribonucleotide reductase, all-alpha domain LIO33_RS05145 PF08343 Ribonucleotide reductase N-terminal LIO33_RS05145 PF02867 Ribonucleotide reductase, barrel domain LIO33_RS05155 PF00268 Ribonucleotide reductase, small chain LIO33_RS05160 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS05190 PF03613 PTS system mannose/fructose/sorbose family IID component LIO33_RS05200 PF03830 PTS system sorbose subfamily IIB component LIO33_RS05205 PF07470 Glycosyl Hydrolase Family 88 LIO33_RS05265 PF01381 Helix-turn-helix LIO33_RS05285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIO33_RS05285 PF01411 tRNA synthetases class II (A) LIO33_RS05285 PF02272 DHHA1 domain LIO33_RS05295 PF13145 PPIC-type PPIASE domain LIO33_RS05300 PF01596 O-methyltransferase LIO33_RS05315 PF01432 Peptidase family M3 LIO33_RS05315 PF08439 Oligopeptidase F LIO33_RS05325 PF01588 Putative tRNA binding domain LIO33_RS05325 PF09334 tRNA synthetases class I (M) LIO33_RS05335 PF00793 DAHP synthetase I family LIO33_RS05340 PF00793 DAHP synthetase I family LIO33_RS05345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LIO33_RS05345 PF08501 Shikimate dehydrogenase substrate binding domain LIO33_RS05350 PF01761 3-dehydroquinate synthase LIO33_RS05355 PF00005 ABC transporter LIO33_RS05360 PF02653 Branched-chain amino acid transport system / permease component LIO33_RS05375 PF01791 DeoC/LacD family aldolase LIO33_RS05380 PF01979 Amidohydrolase family LIO33_RS05385 PF06133 Control of competence regulator ComK, YlbF/YmcA LIO33_RS05390 PF02153 Prephenate dehydrogenase LIO33_RS05395 PF01264 Chorismate synthase LIO33_RS05400 PF01487 Type I 3-dehydroquinase LIO33_RS05405 PF17785 PUA-like domain LIO33_RS05405 PF10672 S-adenosylmethionine-dependent methyltransferase LIO33_RS05410 PF00884 Sulfatase LIO33_RS05420 PF00453 Ribosomal protein L20 LIO33_RS05425 PF01632 Ribosomal protein L35 LIO33_RS05430 PF05198 Translation initiation factor IF-3, N-terminal domain LIO33_RS05430 PF00707 Translation initiation factor IF-3, C-terminal domain LIO33_RS05435 PF02224 Cytidylate kinase LIO33_RS05465 PF00535 Glycosyl transferase family 2 LIO33_RS05470 PF13439 Glycosyltransferase Family 4 LIO33_RS05470 PF00534 Glycosyl transferases group 1 LIO33_RS05480 PF00535 Glycosyl transferase family 2 LIO33_RS05480 PF01501 Glycosyl transferase family 8 LIO33_RS05485 PF01501 Glycosyl transferase family 8 LIO33_RS05505 PF14524 Wzt C-terminal domain LIO33_RS05505 PF00005 ABC transporter LIO33_RS05515 PF00535 Glycosyl transferase family 2 LIO33_RS05535 PF01520 N-acetylmuramoyl-L-alanine amidase LIO33_RS05535 PF05036 Sporulation related domain LIO33_RS05545 PF04321 RmlD substrate binding domain LIO33_RS05550 PF16363 GDP-mannose 4,6 dehydratase LIO33_RS05560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LIO33_RS05565 PF00483 Nucleotidyl transferase LIO33_RS05570 PF02535 ZIP Zinc transporter LIO33_RS05575 PF01784 NIF3 (NGG1p interacting factor 3) LIO33_RS05580 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LIO33_RS05590 PF04204 Homoserine O-succinyltransferase LIO33_RS05595 PF00156 Phosphoribosyl transferase domain LIO33_RS05605 PF01368 DHH family LIO33_RS05605 PF02272 DHHA1 domain LIO33_RS05605 PF17768 RecJ OB domain LIO33_RS05605 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LIO33_RS05610 PF13091 PLD-like domain LIO33_RS05620 PF00106 short chain dehydrogenase LIO33_RS05625 PF12706 Beta-lactamase superfamily domain LIO33_RS05625 PF00753 Metallo-beta-lactamase superfamily LIO33_RS05635 PF16360 GTP-binding GTPase Middle Region LIO33_RS05635 PF13167 GTP-binding GTPase N-terminal LIO33_RS05635 PF01926 50S ribosome-binding GTPase LIO33_RS05650 PF07690 Major Facilitator Superfamily LIO33_RS05655 PF01717 Cobalamin-independent synthase, Catalytic domain LIO33_RS05665 PF02562 PhoH-like protein LIO33_RS05670 PF06855 YozE SAM-like fold LIO33_RS05680 PF02558 Ketopantoate reductase PanE/ApbA LIO33_RS05680 PF08546 Ketopantoate reductase PanE/ApbA C terminal LIO33_RS05685 PF13509 S1 domain LIO33_RS05685 PF17783 CvfB-like winged helix domain LIO33_RS05690 PF01765 Ribosome recycling factor LIO33_RS05695 PF00696 Amino acid kinase family LIO33_RS05700 PF14667 Polysaccharide biosynthesis C-terminal domain LIO33_RS05700 PF01943 Polysaccharide biosynthesis protein LIO33_RS05705 PF02798 Glutathione S-transferase, N-terminal domain LIO33_RS05715 PF00687 Ribosomal protein L1p/L10e family LIO33_RS05720 PF00298 Ribosomal protein L11, RNA binding domain LIO33_RS05720 PF03946 Ribosomal protein L11, N-terminal domain LIO33_RS05730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LIO33_RS05735 PF17854 FtsK alpha domain LIO33_RS05735 PF09397 Ftsk gamma domain LIO33_RS05735 PF01580 FtsK/SpoIIIE family LIO33_RS05740 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIO33_RS05740 PF08244 Glycosyl hydrolases family 32 C terminal LIO33_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS05760 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS05780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LIO33_RS05785 PF01610 Transposase LIO33_RS05785 PF13683 Integrase core domain LIO33_RS05790 PF00009 Elongation factor Tu GTP binding domain LIO33_RS05790 PF03144 Elongation factor Tu domain 2 LIO33_RS05790 PF16658 Class II release factor RF3, C-terminal domain LIO33_RS05805 PF01225 Mur ligase family, catalytic domain LIO33_RS05805 PF08245 Mur ligase middle domain LIO33_RS05805 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS05815 PF07478 D-ala D-ala ligase C-terminus LIO33_RS05815 PF01820 D-ala D-ala ligase N-terminus LIO33_RS05820 PF13662 Toprim domain LIO33_RS05820 PF02132 RecR protein LIO33_RS05825 PF00905 Penicillin binding protein transpeptidase domain LIO33_RS05825 PF03717 Penicillin-binding Protein dimerisation domain LIO33_RS05830 PF00005 ABC transporter LIO33_RS05835 PF00005 ABC transporter LIO33_RS05835 PF12848 ABC transporter LIO33_RS05840 PF00753 Metallo-beta-lactamase superfamily LIO33_RS05845 PF00672 HAMP domain LIO33_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS05845 PF00512 His Kinase A (phospho-acceptor) domain LIO33_RS05845 PF13426 PAS domain LIO33_RS05850 PF00072 Response regulator receiver domain LIO33_RS05850 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS05855 PF00005 ABC transporter LIO33_RS05860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS05865 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS05875 PF03129 Anticodon binding domain LIO33_RS05875 PF02824 TGS domain LIO33_RS05875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIO33_RS05875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LIO33_RS05890 PF00534 Glycosyl transferases group 1 LIO33_RS05890 PF13439 Glycosyltransferase Family 4 LIO33_RS05895 PF13439 Glycosyltransferase Family 4 LIO33_RS05895 PF00534 Glycosyl transferases group 1 LIO33_RS05900 PF12892 Spy0128-like isopeptide containing domain LIO33_RS05905 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS05910 PF01321 Creatinase/Prolidase N-terminal domain LIO33_RS05910 PF00557 Metallopeptidase family M24 LIO33_RS05915 PF01702 Queuine tRNA-ribosyltransferase LIO33_RS05925 PF13380 CoA binding domain LIO33_RS05935 PF01367 5'-3' exonuclease, C-terminal SAM fold LIO33_RS05935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LIO33_RS05935 PF00476 DNA polymerase family A LIO33_RS05950 PF00005 ABC transporter LIO33_RS05960 PF08534 Redoxin LIO33_RS05965 PF00403 Heavy-metal-associated domain LIO33_RS05970 PF03577 Peptidase family C69 LIO33_RS05975 PF03848 Tellurite resistance protein TehB LIO33_RS05975 PF09313 Domain of unknown function (DUF1971) LIO33_RS05980 PF08240 Alcohol dehydrogenase GroES-like domain LIO33_RS05980 PF00107 Zinc-binding dehydrogenase LIO33_RS05985 PF01668 SmpB protein LIO33_RS05990 PF17876 Cold shock domain LIO33_RS05990 PF08206 Ribonuclease B OB domain LIO33_RS05990 PF00773 RNB domain LIO33_RS05990 PF00575 S1 RNA binding domain LIO33_RS06000 PF00471 Ribosomal protein L33 LIO33_RS06005 PF07690 Major Facilitator Superfamily LIO33_RS06005 PF00083 Sugar (and other) transporter LIO33_RS06010 PF01121 Dephospho-CoA kinase LIO33_RS06015 PF06827 Zinc finger found in FPG and IleRS LIO33_RS06015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LIO33_RS06015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LIO33_RS06020 PF01926 50S ribosome-binding GTPase LIO33_RS06020 PF07650 KH domain LIO33_RS06025 PF01219 Prokaryotic diacylglycerol kinase LIO33_RS06030 PF02130 Uncharacterized protein family UPF0054 LIO33_RS06035 PF01418 Helix-turn-helix domain, rpiR family LIO33_RS06035 PF01380 SIS domain LIO33_RS06040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIO33_RS06040 PF00367 phosphotransferase system, EIIB LIO33_RS06040 PF02378 Phosphotransferase system, EIIC LIO33_RS06045 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LIO33_RS06050 PF17440 Thiol-activated cytolysin beta sandwich domain LIO33_RS06050 PF01289 Thiol-activated cytolysin LIO33_RS06055 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS06060 PF00664 ABC transporter transmembrane region LIO33_RS06060 PF00005 ABC transporter LIO33_RS06065 PF00664 ABC transporter transmembrane region LIO33_RS06065 PF00005 ABC transporter LIO33_RS06080 PF07664 Ferrous iron transport protein B C terminus LIO33_RS06080 PF02421 Ferrous iron transport protein B LIO33_RS06080 PF07670 Nucleoside recognition LIO33_RS06080 PF17910 FeoB cytosolic helical domain LIO33_RS06090 PF18075 FtsX extracellular domain LIO33_RS06090 PF02687 FtsX-like permease family LIO33_RS06095 PF00005 ABC transporter LIO33_RS06105 PF08331 Domain of unknown function (DUF1730) LIO33_RS06110 PF04892 VanZ like family LIO33_RS06130 PF00690 Cation transporter/ATPase, N-terminus LIO33_RS06130 PF00689 Cation transporting ATPase, C-terminus LIO33_RS06135 PF13936 Helix-turn-helix domain LIO33_RS06135 PF00665 Integrase core domain LIO33_RS06170 PF01883 Iron-sulfur cluster assembly protein LIO33_RS06175 PF03979 Sigma-70 factor, region 1.1 LIO33_RS06175 PF04542 Sigma-70 region 2 LIO33_RS06175 PF04539 Sigma-70 region 3 LIO33_RS06175 PF04545 Sigma-70, region 4 LIO33_RS06175 PF00140 Sigma-70 factor, region 1.2 LIO33_RS06180 PF10410 DnaB-helicase binding domain of primase LIO33_RS06180 PF01807 CHC2 zinc finger LIO33_RS06180 PF08275 DNA primase catalytic core, N-terminal domain LIO33_RS06185 PF01741 Large-conductance mechanosensitive channel, MscL LIO33_RS06190 PF16363 GDP-mannose 4,6 dehydratase LIO33_RS06195 PF01165 Ribosomal protein S21 LIO33_RS06205 PF13344 Haloacid dehalogenase-like hydrolase LIO33_RS06210 PF00293 NUDIX domain LIO33_RS06220 PF06969 HemN C-terminal domain LIO33_RS06220 PF04055 Radical SAM superfamily LIO33_RS06230 PF00343 Carbohydrate phosphorylase LIO33_RS06235 PF01048 Phosphorylase superfamily LIO33_RS06240 PF01048 Phosphorylase superfamily LIO33_RS06250 PF01676 Metalloenzyme superfamily LIO33_RS06255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LIO33_RS06260 PF01420 Type I restriction modification DNA specificity domain LIO33_RS06265 PF10396 GTP-binding protein TrmE N-terminus LIO33_RS06265 PF01926 50S ribosome-binding GTPase LIO33_RS06265 PF12631 MnmE helical domain LIO33_RS06280 PF15975 Flotillin LIO33_RS06280 PF01145 SPFH domain / Band 7 family LIO33_RS06285 PF04011 LemA family LIO33_RS06295 PF03167 Uracil DNA glycosylase superfamily LIO33_RS06305 PF01546 Peptidase family M20/M25/M40 LIO33_RS06310 PF00375 Sodium:dicarboxylate symporter family LIO33_RS06330 PF08241 Methyltransferase domain LIO33_RS06335 PF00005 ABC transporter LIO33_RS06335 PF12848 ABC transporter LIO33_RS06340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LIO33_RS06340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LIO33_RS06340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LIO33_RS06340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LIO33_RS06350 PF02457 DisA bacterial checkpoint controller nucleotide-binding LIO33_RS06355 PF08353 Domain of unknown function (DUF1727) LIO33_RS06355 PF08245 Mur ligase middle domain LIO33_RS06360 PF07685 CobB/CobQ-like glutamine amidotransferase domain LIO33_RS06365 PF13847 Methyltransferase domain LIO33_RS06375 PF16326 ABC transporter C-terminal domain LIO33_RS06375 PF00005 ABC transporter LIO33_RS06375 PF12848 ABC transporter LIO33_RS06390 PF00756 Putative esterase LIO33_RS06395 PF00753 Metallo-beta-lactamase superfamily LIO33_RS06395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LIO33_RS06395 PF17770 Ribonuclease J C-terminal domain LIO33_RS06410 PF00005 ABC transporter LIO33_RS06410 PF08402 TOBE domain LIO33_RS06425 PF00232 Glycosyl hydrolase family 1 LIO33_RS06430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIO33_RS06430 PF00367 phosphotransferase system, EIIB LIO33_RS06430 PF02378 Phosphotransferase system, EIIC LIO33_RS06435 PF00874 PRD domain LIO33_RS06435 PF03123 CAT RNA binding domain LIO33_RS06440 PF05670 NFACT protein RNA binding domain LIO33_RS06445 PF03306 Alpha-acetolactate decarboxylase LIO33_RS06455 PF01594 AI-2E family transporter LIO33_RS06460 PF10282 Lactonase, 7-bladed beta-propeller LIO33_RS06470 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS06485 PF00113 Enolase, C-terminal TIM barrel domain LIO33_RS06485 PF03952 Enolase, N-terminal domain LIO33_RS06500 PF02595 Glycerate kinase family LIO33_RS06505 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS06520 PF06160 Septation ring formation regulator, EzrA LIO33_RS06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS06525 PF00204 DNA gyrase B LIO33_RS06525 PF00986 DNA gyrase B subunit, carboxyl terminus LIO33_RS06525 PF01751 Toprim domain LIO33_RS06530 PF01965 DJ-1/PfpI family LIO33_RS06535 PF01098 Cell cycle protein LIO33_RS06550 PF00589 Phage integrase family LIO33_RS06550 PF14659 Phage integrase, N-terminal SAM-like domain LIO33_RS06555 PF01197 Ribosomal protein L31 LIO33_RS06560 PF02424 ApbE family LIO33_RS06565 PF01368 DHH family LIO33_RS06565 PF02272 DHHA1 domain LIO33_RS06570 PF00258 Flavodoxin LIO33_RS06575 PF00253 Ribosomal protein S14p/S29e LIO33_RS06580 PF01817 Chorismate mutase type II LIO33_RS06580 PF02153 Prephenate dehydrogenase LIO33_RS06585 PF00654 Voltage gated chloride channel LIO33_RS06595 PF17936 Bacterial Ig domain LIO33_RS06595 PF02872 5'-nucleotidase, C-terminal domain LIO33_RS06595 PF00149 Calcineurin-like phosphoesterase LIO33_RS06600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LIO33_RS06600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LIO33_RS06605 PF06144 DNA polymerase III, delta subunit LIO33_RS06615 PF02677 Epoxyqueuosine reductase QueH LIO33_RS06620 PF00005 ABC transporter LIO33_RS06625 PF12399 Branched-chain amino acid ATP-binding cassette transporter LIO33_RS06625 PF00005 ABC transporter LIO33_RS06630 PF11862 Domain of unknown function (DUF3382) LIO33_RS06630 PF02653 Branched-chain amino acid transport system / permease component LIO33_RS06635 PF02653 Branched-chain amino acid transport system / permease component LIO33_RS06640 PF13458 Periplasmic binding protein LIO33_RS06645 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LIO33_RS06650 PF00574 Clp protease LIO33_RS06660 PF16657 Maltogenic Amylase, C-terminal domain LIO33_RS06660 PF00128 Alpha amylase, catalytic domain LIO33_RS06665 PF00128 Alpha amylase, catalytic domain LIO33_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS06675 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS06680 PF01547 Bacterial extracellular solute-binding protein LIO33_RS06685 PF16874 Glycosyl hydrolase family 36 C-terminal domain LIO33_RS06685 PF16875 Glycosyl hydrolase family 36 N-terminal domain LIO33_RS06690 PF02311 AraC-like ligand binding domain LIO33_RS06690 PF12833 Helix-turn-helix domain LIO33_RS06695 PF00155 Aminotransferase class I and II LIO33_RS06700 PF01053 Cys/Met metabolism PLP-dependent enzyme LIO33_RS06720 PF05175 Methyltransferase small domain LIO33_RS06725 PF01541 GIY-YIG catalytic domain LIO33_RS06735 PF02525 Flavodoxin-like fold LIO33_RS06750 PF01022 Bacterial regulatory protein, arsR family LIO33_RS06755 PF00270 DEAD/DEAH box helicase LIO33_RS06755 PF00271 Helicase conserved C-terminal domain LIO33_RS06760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIO33_RS06760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIO33_RS06765 PF08000 Bacterial PH domain LIO33_RS06790 PF01048 Phosphorylase superfamily LIO33_RS06800 PF00293 NUDIX domain LIO33_RS06805 PF00132 Bacterial transferase hexapeptide (six repeats) LIO33_RS06805 PF14602 Hexapeptide repeat of succinyl-transferase LIO33_RS06805 PF12804 MobA-like NTP transferase domain LIO33_RS06830 PF00005 ABC transporter LIO33_RS06840 PF00679 Elongation factor G C-terminus LIO33_RS06840 PF14492 Elongation Factor G, domain II LIO33_RS06840 PF03764 Elongation factor G, domain IV LIO33_RS06840 PF00009 Elongation factor Tu GTP binding domain LIO33_RS06865 PF02687 FtsX-like permease family LIO33_RS06870 PF00005 ABC transporter LIO33_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS06880 PF00072 Response regulator receiver domain LIO33_RS06880 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS06890 PF00155 Aminotransferase class I and II LIO33_RS06900 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS06905 PF00005 ABC transporter LIO33_RS06905 PF00571 CBS domain LIO33_RS06925 PF01790 Prolipoprotein diacylglyceryl transferase LIO33_RS06930 PF07475 HPr Serine kinase C-terminal domain LIO33_RS06930 PF02603 HPr Serine kinase N terminus LIO33_RS06935 PF01238 Phosphomannose isomerase type I LIO33_RS06955 PF10263 SprT-like family LIO33_RS06955 PF17283 SprT-like zinc ribbon domain LIO33_RS06965 PF00248 Aldo/keto reductase family LIO33_RS06970 PF06177 QueT transporter LIO33_RS06975 PF04138 GtrA-like protein LIO33_RS06985 PF00557 Metallopeptidase family M24 LIO33_RS06995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LIO33_RS07000 PF02525 Flavodoxin-like fold LIO33_RS07005 PF02773 S-adenosylmethionine synthetase, C-terminal domain LIO33_RS07005 PF02772 S-adenosylmethionine synthetase, central domain LIO33_RS07005 PF00438 S-adenosylmethionine synthetase, N-terminal domain LIO33_RS07010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LIO33_RS07020 PF05343 M42 glutamyl aminopeptidase LIO33_RS07035 PF12169 DNA polymerase III subunits gamma and tau domain III LIO33_RS07040 PF13185 GAF domain LIO33_RS07050 PF10400 Virulence activator alpha C-term LIO33_RS07050 PF03551 Transcriptional regulator PadR-like family LIO33_RS07055 PF00485 Phosphoribulokinase / Uridine kinase family LIO33_RS07065 PF00270 DEAD/DEAH box helicase LIO33_RS07065 PF00271 Helicase conserved C-terminal domain LIO33_RS07070 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LIO33_RS07070 PF01522 Polysaccharide deacetylase LIO33_RS07085 PF00300 Histidine phosphatase superfamily (branch 1) LIO33_RS07090 PF02803 Thiolase, C-terminal domain LIO33_RS07090 PF00108 Thiolase, N-terminal domain LIO33_RS07095 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LIO33_RS07095 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LIO33_RS07100 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LIO33_RS07120 PF00216 Bacterial DNA-binding protein LIO33_RS07130 PF13472 GDSL-like Lipase/Acylhydrolase family LIO33_RS07135 PF02645 Uncharacterised protein, DegV family COG1307 LIO33_RS07140 PF13476 AAA domain LIO33_RS07145 PF02863 Arginine repressor, C-terminal domain LIO33_RS07145 PF01316 Arginine repressor, DNA binding domain LIO33_RS07150 PF01479 S4 domain LIO33_RS07150 PF01728 FtsJ-like methyltransferase LIO33_RS07155 PF00348 Polyprenyl synthetase LIO33_RS07160 PF02609 Exonuclease VII small subunit LIO33_RS07165 PF13742 OB-fold nucleic acid binding domain LIO33_RS07165 PF02601 Exonuclease VII, large subunit LIO33_RS07170 PF04228 Putative neutral zinc metallopeptidase LIO33_RS07175 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family LIO33_RS07180 PF00512 His Kinase A (phospho-acceptor) domain LIO33_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS07180 PF00672 HAMP domain LIO33_RS07185 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS07185 PF00072 Response regulator receiver domain LIO33_RS07205 PF01368 DHH family LIO33_RS07205 PF02833 DHHA2 domain LIO33_RS07215 PF04055 Radical SAM superfamily LIO33_RS07220 PF01595 Cyclin M transmembrane N-terminal domain LIO33_RS07220 PF03471 Transporter associated domain LIO33_RS07220 PF00571 CBS domain LIO33_RS07225 PF00005 ABC transporter LIO33_RS07230 PF06962 Putative rRNA methylase LIO33_RS07240 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LIO33_RS07240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LIO33_RS07240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LIO33_RS07245 PF02540 NAD synthase LIO33_RS07255 PF04055 Radical SAM superfamily LIO33_RS07260 PF06265 Protein of unknown function (DUF1027) LIO33_RS07265 PF13180 PDZ domain LIO33_RS07265 PF05362 Lon protease (S16) C-terminal proteolytic domain LIO33_RS07270 PF01467 Cytidylyltransferase-like LIO33_RS07285 PF00581 Rhodanese-like domain LIO33_RS07290 PF06014 Bacterial protein of unknown function (DUF910) LIO33_RS07295 PF00072 Response regulator receiver domain LIO33_RS07295 PF00196 Bacterial regulatory proteins, luxR family LIO33_RS07300 PF07730 Histidine kinase LIO33_RS07300 PF13185 GAF domain LIO33_RS07310 PF00005 ABC transporter LIO33_RS07315 PF00210 Ferritin-like domain LIO33_RS07320 PF05532 CsbD-like LIO33_RS07325 PF01451 Low molecular weight phosphotyrosine protein phosphatase LIO33_RS07335 PF01757 Acyltransferase family LIO33_RS07340 PF01569 PAP2 superfamily LIO33_RS07345 PF12822 ECF transporter, substrate-specific component LIO33_RS07350 PF00588 SpoU rRNA Methylase family LIO33_RS07355 PF01809 Putative membrane protein insertion efficiency factor LIO33_RS07360 PF01479 S4 domain LIO33_RS07360 PF00849 RNA pseudouridylate synthase LIO33_RS07365 PF04079 Segregation and condensation complex subunit ScpB LIO33_RS07370 PF02616 Segregation and condensation protein ScpA LIO33_RS07375 PF00589 Phage integrase family LIO33_RS07390 PF01725 Ham1 family LIO33_RS07395 PF01177 Asp/Glu/Hydantoin racemase LIO33_RS07400 PF03672 Uncharacterised protein family (UPF0154) LIO33_RS07405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LIO33_RS07405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LIO33_RS07410 PF03051 Peptidase C1-like family LIO33_RS07415 PF01027 Inhibitor of apoptosis-promoting Bax1 LIO33_RS07425 PF00588 SpoU rRNA Methylase family LIO33_RS07425 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIO33_RS07430 PF00708 Acylphosphatase LIO33_RS07435 PF02096 60Kd inner membrane protein LIO33_RS07440 PF03449 Transcription elongation factor, N-terminal LIO33_RS07440 PF01272 Transcription elongation factor, GreA/GreB, C-term LIO33_RS07445 PF02618 YceG-like family LIO33_RS07455 PF01225 Mur ligase family, catalytic domain LIO33_RS07455 PF02875 Mur ligase family, glutamate ligase domain LIO33_RS07455 PF08245 Mur ligase middle domain LIO33_RS07475 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LIO33_RS07475 PF01926 50S ribosome-binding GTPase LIO33_RS07485 PF07319 Primosomal protein DnaI N-terminus LIO33_RS07485 PF01695 IstB-like ATP binding protein LIO33_RS07495 PF03477 ATP cone domain LIO33_RS07500 PF01594 AI-2E family transporter LIO33_RS07505 PF00072 Response regulator receiver domain LIO33_RS07505 PF00486 Transcriptional regulatory protein, C terminal LIO33_RS07510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LIO33_RS07510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LIO33_RS07520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS07530 PF00271 Helicase conserved C-terminal domain LIO33_RS07530 PF00270 DEAD/DEAH box helicase LIO33_RS07540 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LIO33_RS07540 PF00953 Glycosyl transferase family 4 LIO33_RS07545 PF03717 Penicillin-binding Protein dimerisation domain LIO33_RS07545 PF00905 Penicillin binding protein transpeptidase domain LIO33_RS07545 PF03793 PASTA domain LIO33_RS07555 PF01795 MraW methylase family LIO33_RS07600 PF02424 ApbE family LIO33_RS07605 PF04205 FMN-binding domain LIO33_RS07610 PF00348 Polyprenyl synthetase LIO33_RS07615 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS07625 PF02386 Cation transport protein LIO33_RS07630 PF02080 TrkA-C domain LIO33_RS07630 PF02254 TrkA-N domain LIO33_RS07635 PF01554 MatE LIO33_RS07645 PF05979 Bacterial protein of unknown function (DUF896) LIO33_RS07650 PF02092 Glycyl-tRNA synthetase beta subunit LIO33_RS07655 PF02091 Glycyl-tRNA synthetase alpha subunit LIO33_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS07675 PF00005 ABC transporter LIO33_RS07675 PF09383 NIL domain LIO33_RS07680 PF07687 Peptidase dimerisation domain LIO33_RS07680 PF01546 Peptidase family M20/M25/M40 LIO33_RS07685 PF03180 NLPA lipoprotein LIO33_RS07690 PF07722 Peptidase C26 LIO33_RS07695 PF01717 Cobalamin-independent synthase, Catalytic domain LIO33_RS07695 PF08267 Cobalamin-independent synthase, N-terminal domain LIO33_RS07700 PF02219 Methylenetetrahydrofolate reductase LIO33_RS07705 PF00860 Permease family LIO33_RS07715 PF03610 PTS system fructose IIA component LIO33_RS07715 PF03830 PTS system sorbose subfamily IIB component LIO33_RS07720 PF03609 PTS system sorbose-specific iic component LIO33_RS07725 PF03613 PTS system mannose/fructose/sorbose family IID component LIO33_RS07735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIO33_RS07735 PF02403 Seryl-tRNA synthetase N-terminal domain LIO33_RS07740 PF12161 HsdM N-terminal domain LIO33_RS07740 PF02384 N-6 DNA Methylase LIO33_RS07750 PF18766 SWI2/SNF2 ATPase LIO33_RS07750 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LIO33_RS07750 PF12008 Type I restriction and modification enzyme - subunit R C terminal LIO33_RS07785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LIO33_RS07790 PF01039 Carboxyl transferase domain LIO33_RS07795 PF00289 Biotin carboxylase, N-terminal domain LIO33_RS07795 PF02785 Biotin carboxylase C-terminal domain LIO33_RS07795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LIO33_RS07800 PF07977 FabA-like domain LIO33_RS07805 PF00364 Biotin-requiring enzyme LIO33_RS07810 PF00109 Beta-ketoacyl synthase, N-terminal domain LIO33_RS07810 PF02801 Beta-ketoacyl synthase, C-terminal domain LIO33_RS07820 PF00698 Acyl transferase domain LIO33_RS07825 PF03060 Nitronate monooxygenase LIO33_RS07830 PF00550 Phosphopantetheine attachment site LIO33_RS07835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LIO33_RS07835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIO33_RS07845 PF00378 Enoyl-CoA hydratase/isomerase LIO33_RS07850 PF13419 Haloacid dehalogenase-like hydrolase LIO33_RS07855 PF13840 ACT domain LIO33_RS07855 PF00696 Amino acid kinase family LIO33_RS07860 PF01168 Alanine racemase, N-terminal domain LIO33_RS07860 PF00842 Alanine racemase, C-terminal domain LIO33_RS07865 PF01648 4'-phosphopantetheinyl transferase superfamily LIO33_RS07870 PF07517 SecA DEAD-like domain LIO33_RS07870 PF02810 SEC-C motif LIO33_RS07870 PF07516 SecA Wing and Scaffold domain LIO33_RS07870 PF01043 SecA preprotein cross-linking domain LIO33_RS07880 PF00480 ROK family LIO33_RS07885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LIO33_RS07885 PF00367 phosphotransferase system, EIIB LIO33_RS07885 PF02378 Phosphotransferase system, EIIC LIO33_RS07890 PF08244 Glycosyl hydrolases family 32 C terminal LIO33_RS07890 PF00251 Glycosyl hydrolases family 32 N-terminal domain LIO33_RS07895 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS07900 PF01029 NusB family LIO33_RS07905 PF03780 Asp23 family, cell envelope-related function LIO33_RS07910 PF08207 Elongation factor P (EF-P) KOW-like domain LIO33_RS07910 PF09285 Elongation factor P, C-terminal LIO33_RS07910 PF01132 Elongation factor P (EF-P) OB domain LIO33_RS07915 PF01321 Creatinase/Prolidase N-terminal domain LIO33_RS07915 PF00557 Metallopeptidase family M24 LIO33_RS07920 PF00005 ABC transporter LIO33_RS07920 PF17755 UvrA DNA-binding domain LIO33_RS07920 PF17760 UvrA interaction domain LIO33_RS07935 PF01084 Ribosomal protein S18 LIO33_RS07940 PF00436 Single-strand binding protein family LIO33_RS07945 PF01250 Ribosomal protein S6 LIO33_RS07950 PF00665 Integrase core domain LIO33_RS07950 PF13936 Helix-turn-helix domain LIO33_RS07955 PF10437 Bacterial lipoate protein ligase C-terminus LIO33_RS07955 PF03099 Biotin/lipoate A/B protein ligase family LIO33_RS07965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIO33_RS07965 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS07970 PF02817 e3 binding domain LIO33_RS07970 PF00364 Biotin-requiring enzyme LIO33_RS07970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LIO33_RS07975 PF02780 Transketolase, C-terminal domain LIO33_RS07975 PF00364 Biotin-requiring enzyme LIO33_RS07975 PF02779 Transketolase, pyrimidine binding domain LIO33_RS07980 PF00676 Dehydrogenase E1 component LIO33_RS07985 PF03458 UPF0126 domain LIO33_RS07990 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 LIO33_RS08000 PF02033 Ribosome-binding factor A LIO33_RS08005 PF00009 Elongation factor Tu GTP binding domain LIO33_RS08005 PF04760 Translation initiation factor IF-2, N-terminal region LIO33_RS08005 PF11987 Translation-initiation factor 2 LIO33_RS08010 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LIO33_RS08015 PF04296 Protein of unknown function (DUF448) LIO33_RS08020 PF13184 NusA-like KH domain LIO33_RS08020 PF08529 NusA N-terminal domain LIO33_RS08020 PF00575 S1 RNA binding domain LIO33_RS08025 PF02576 RimP N-terminal domain LIO33_RS08025 PF17384 RimP C-terminal SH3 domain LIO33_RS08030 PF02390 Putative methyltransferase LIO33_RS08040 PF05975 Bacterial ABC transporter protein EcsB LIO33_RS08045 PF00005 ABC transporter LIO33_RS08050 PF01230 HIT domain LIO33_RS08060 PF03816 Cell envelope-related transcriptional attenuator domain LIO33_RS08070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LIO33_RS08075 PF02734 DAK2 domain LIO33_RS08075 PF13684 Dihydroxyacetone kinase family LIO33_RS08080 PF03780 Asp23 family, cell envelope-related function LIO33_RS08090 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS08100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIO33_RS08100 PF00005 ABC transporter LIO33_RS08105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LIO33_RS08105 PF00005 ABC transporter LIO33_RS08110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LIO33_RS08115 PF07943 Penicillin-binding protein 5, C-terminal domain LIO33_RS08115 PF00768 D-alanyl-D-alanine carboxypeptidase LIO33_RS08120 PF01458 Uncharacterized protein family (UPF0051) LIO33_RS08125 PF01592 NifU-like N terminal domain LIO33_RS08130 PF00266 Aminotransferase class-V LIO33_RS08135 PF01458 Uncharacterized protein family (UPF0051) LIO33_RS08140 PF00005 ABC transporter LIO33_RS08145 PF00953 Glycosyl transferase family 4 LIO33_RS08150 PF05389 Negative regulator of genetic competence (MecA) LIO33_RS08155 PF02673 Bacitracin resistance protein BacA LIO33_RS08160 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS08165 PF00005 ABC transporter LIO33_RS08180 PF00585 C-terminal regulatory domain of Threonine dehydratase LIO33_RS08180 PF00291 Pyridoxal-phosphate dependent enzyme LIO33_RS08185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LIO33_RS08185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LIO33_RS08190 PF01842 ACT domain LIO33_RS08190 PF10369 Small subunit of acetolactate synthase LIO33_RS08195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LIO33_RS08195 PF00205 Thiamine pyrophosphate enzyme, central domain LIO33_RS08195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LIO33_RS08215 PF00920 Dehydratase family LIO33_RS08225 PF01883 Iron-sulfur cluster assembly protein LIO33_RS08240 PF00380 Ribosomal protein S9/S16 LIO33_RS08245 PF00572 Ribosomal protein L13 LIO33_RS08250 PF02645 Uncharacterised protein, DegV family COG1307 LIO33_RS08260 PF08032 RNA 2'-O ribose methyltransferase substrate binding LIO33_RS08260 PF00588 SpoU rRNA Methylase family LIO33_RS08285 PF03459 TOBE domain LIO33_RS08285 PF17912 MalK OB fold domain LIO33_RS08285 PF00005 ABC transporter LIO33_RS08290 PF13556 PucR C-terminal helix-turn-helix domain LIO33_RS08295 PF00072 Response regulator receiver domain LIO33_RS08295 PF12833 Helix-turn-helix domain LIO33_RS08300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LIO33_RS08300 PF02743 Cache domain LIO33_RS08300 PF06580 Histidine kinase LIO33_RS08300 PF00672 HAMP domain LIO33_RS08315 PF12010 Domain of unknown function (DUF3502) LIO33_RS08320 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS08325 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS08335 PF00480 ROK family LIO33_RS08340 PF09261 Alpha mannosidase middle domain LIO33_RS08340 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain LIO33_RS08340 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 LIO33_RS08340 PF01074 Glycosyl hydrolases family 38 N-terminal domain LIO33_RS08340 PF07748 Glycosyl hydrolases family 38 C-terminal domain LIO33_RS08360 PF00636 Ribonuclease III domain LIO33_RS08365 PF01406 tRNA synthetases class I (C) catalytic domain LIO33_RS08365 PF09190 DALR domain LIO33_RS08375 PF00132 Bacterial transferase hexapeptide (six repeats) LIO33_RS08380 PF00575 S1 RNA binding domain LIO33_RS08380 PF03725 3' exoribonuclease family, domain 2 LIO33_RS08380 PF01138 3' exoribonuclease family, domain 1 LIO33_RS08380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LIO33_RS08380 PF00013 KH domain LIO33_RS08400 PF02378 Phosphotransferase system, EIIC LIO33_RS08400 PF00367 phosphotransferase system, EIIB LIO33_RS08405 PF13580 SIS domain LIO33_RS08410 PF01380 SIS domain LIO33_RS08410 PF01418 Helix-turn-helix domain, rpiR family LIO33_RS08415 PF00312 Ribosomal protein S15 LIO33_RS08420 PF00860 Permease family LIO33_RS08435 PF00849 RNA pseudouridylate synthase LIO33_RS08435 PF01479 S4 domain LIO33_RS08455 PF01327 Polypeptide deformylase LIO33_RS08465 PF00694 Aconitase C-terminal domain LIO33_RS08470 PF00330 Aconitase family (aconitate hydratase) LIO33_RS08475 PF00180 Isocitrate/isopropylmalate dehydrogenase LIO33_RS08480 PF08502 LeuA allosteric (dimerisation) domain LIO33_RS08480 PF00682 HMGL-like LIO33_RS08490 PF02073 Thermophilic metalloprotease (M29) LIO33_RS08505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LIO33_RS08505 PF14480 DNA polymerase III polC-type N-terminus I LIO33_RS08505 PF11490 DNA polymerase III polC-type N-terminus II LIO33_RS08505 PF07733 Bacterial DNA polymerase III alpha NTPase domain LIO33_RS08505 PF00929 Exonuclease LIO33_RS08505 PF02811 PHP domain LIO33_RS08510 PF02733 Dak1 domain LIO33_RS08520 PF02733 Dak1 domain LIO33_RS08525 PF02734 DAK2 domain LIO33_RS08530 PF03610 PTS system fructose IIA component LIO33_RS08535 PF00230 Major intrinsic protein LIO33_RS08540 PF03129 Anticodon binding domain LIO33_RS08540 PF04073 Aminoacyl-tRNA editing domain LIO33_RS08540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LIO33_RS08545 PF02163 Peptidase family M50 LIO33_RS08545 PF13180 PDZ domain LIO33_RS08555 PF01255 Putative undecaprenyl diphosphate synthase LIO33_RS08560 PF02699 Preprotein translocase subunit LIO33_RS08565 PF00709 Adenylosuccinate synthetase LIO33_RS08570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIO33_RS08570 PF18419 ATP-grasp-like domain LIO33_RS08570 PF04262 Glutamate-cysteine ligase LIO33_RS08580 PF01430 Hsp33 protein LIO33_RS08585 PF01207 Dihydrouridine synthase (Dus) LIO33_RS08600 PF01467 Cytidylyltransferase-like LIO33_RS08605 PF17871 AAA lid domain LIO33_RS08605 PF00004 ATPase family associated with various cellular activities (AAA) LIO33_RS08605 PF07724 AAA domain (Cdc48 subfamily) LIO33_RS08605 PF02861 Clp amino terminal domain, pathogenicity island component LIO33_RS08605 PF10431 C-terminal, D2-small domain, of ClpB protein LIO33_RS08610 PF17727 CtsR C-terminal dimerization domain LIO33_RS08610 PF05848 CtsR N-terminal HTH domain LIO33_RS08625 PF00889 Elongation factor TS LIO33_RS08630 PF00318 Ribosomal protein S2 LIO33_RS08645 PF00082 Subtilase family LIO33_RS08645 PF02225 PA domain LIO33_RS08645 PF00746 LPXTG cell wall anchor motif LIO33_RS08645 PF06280 Fn3-like domain LIO33_RS08650 PF02357 Transcription termination factor nusG LIO33_RS08650 PF00467 KOW motif LIO33_RS08660 PF00471 Ribosomal protein L33 LIO33_RS08665 PF00912 Transglycosylase LIO33_RS08665 PF00905 Penicillin binding protein transpeptidase domain LIO33_RS08670 PF07992 Pyridine nucleotide-disulphide oxidoreductase LIO33_RS08675 PF01479 S4 domain LIO33_RS08675 PF00849 RNA pseudouridylate synthase LIO33_RS08680 PF00156 Phosphoribosyl transferase domain LIO33_RS08680 PF09182 Bacterial purine repressor, N-terminal LIO33_RS08690 PF01966 HD domain LIO33_RS08690 PF01336 OB-fold nucleic acid binding domain LIO33_RS08695 PF02646 RmuC family LIO33_RS08700 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LIO33_RS08700 PF04263 Thiamin pyrophosphokinase, catalytic domain LIO33_RS08705 PF00834 Ribulose-phosphate 3 epimerase family LIO33_RS08710 PF03193 RsgA GTPase LIO33_RS08710 PF16745 RsgA N-terminal domain LIO33_RS08720 PF03412 Peptidase C39 family LIO33_RS08720 PF00664 ABC transporter transmembrane region LIO33_RS08720 PF00005 ABC transporter LIO33_RS08745 PF00398 Ribosomal RNA adenine dimethylase LIO33_RS08755 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LIO33_RS08765 PF00293 NUDIX domain LIO33_RS08765 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LIO33_RS08765 PF09297 NADH pyrophosphatase zinc ribbon domain LIO33_RS08785 PF13331 Domain of unknown function (DUF4093) LIO33_RS08790 PF01026 TatD related DNase LIO33_RS08795 PF00468 Ribosomal protein L34 LIO33_RS08800 PF01424 R3H domain LIO33_RS08800 PF14804 Jag N-terminus LIO33_RS08805 PF02096 60Kd inner membrane protein LIO33_RS08810 PF00825 Ribonuclease P LIO33_RS08815 PF14698 Argininosuccinate lyase C-terminal LIO33_RS08815 PF00206 Lyase LIO33_RS08820 PF00764 Arginosuccinate synthase LIO33_RS08830 PF08279 HTH domain LIO33_RS08830 PF02829 3H domain LIO33_RS08845 PF02574 Homocysteine S-methyltransferase LIO33_RS08850 PF00324 Amino acid permease LIO33_RS08855 PF00749 tRNA synthetases class I (E and Q), catalytic domain LIO33_RS08875 PF01987 Mitochondrial biogenesis AIM24 LIO33_RS08880 PF00484 Carbonic anhydrase LIO33_RS08885 PF18073 Rubredoxin metal binding domain LIO33_RS08895 PF00692 dUTPase LIO33_RS08900 PF00664 ABC transporter transmembrane region LIO33_RS08900 PF00005 ABC transporter LIO33_RS08905 PF00664 ABC transporter transmembrane region LIO33_RS08905 PF00005 ABC transporter LIO33_RS08915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LIO33_RS08915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LIO33_RS08920 PF00483 Nucleotidyl transferase LIO33_RS08925 PF01694 Rhomboid family LIO33_RS08930 PF01812 5-formyltetrahydrofolate cyclo-ligase family LIO33_RS08935 PF01546 Peptidase family M20/M25/M40 LIO33_RS08935 PF07687 Peptidase dimerisation domain LIO33_RS08940 PF14602 Hexapeptide repeat of succinyl-transferase LIO33_RS08940 PF00132 Bacterial transferase hexapeptide (six repeats) LIO33_RS08940 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LIO33_RS08955 PF00149 Calcineurin-like phosphoesterase LIO33_RS08960 PF00342 Phosphoglucose isomerase LIO33_RS08975 PF14437 MafB19-like deaminase LIO33_RS08980 PF02779 Transketolase, pyrimidine binding domain LIO33_RS08980 PF02780 Transketolase, C-terminal domain LIO33_RS08980 PF00456 Transketolase, thiamine diphosphate binding domain LIO33_RS09000 PF00596 Class II Aldolase and Adducin N-terminal domain LIO33_RS09005 PF01261 Xylose isomerase-like TIM barrel LIO33_RS09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LIO33_RS09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIO33_RS09020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS09025 PF03611 PTS system sugar-specific permease component LIO33_RS09030 PF00128 Alpha amylase, catalytic domain LIO33_RS09030 PF17999 Pullulanase N1-terminal domain LIO33_RS09030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIO33_RS09035 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS09040 PF00005 ABC transporter LIO33_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS09050 PF00497 Bacterial extracellular solute-binding proteins, family 3 LIO33_RS09055 PF05257 CHAP domain LIO33_RS09055 PF01476 LysM domain LIO33_RS09060 PF02378 Phosphotransferase system, EIIC LIO33_RS09070 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LIO33_RS09075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LIO33_RS09080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LIO33_RS09080 PF00874 PRD domain LIO33_RS09080 PF05043 Mga helix-turn-helix domain LIO33_RS09080 PF08279 HTH domain LIO33_RS09090 PF00232 Glycosyl hydrolase family 1 LIO33_RS09095 PF02056 Family 4 glycosyl hydrolase LIO33_RS09095 PF11975 Family 4 glycosyl hydrolase C-terminal domain LIO33_RS09100 PF08264 Anticodon-binding domain of tRNA LIO33_RS09100 PF00133 tRNA synthetases class I (I, L, M and V) LIO33_RS09100 PF13603 Leucyl-tRNA synthetase, Domain 2 LIO33_RS09100 PF09334 tRNA synthetases class I (M) LIO33_RS09105 PF01431 Peptidase family M13 LIO33_RS09105 PF05649 Peptidase family M13 LIO33_RS09110 PF00950 ABC 3 transport family LIO33_RS09115 PF00950 ABC 3 transport family LIO33_RS09120 PF00005 ABC transporter LIO33_RS09125 PF01297 Zinc-uptake complex component A periplasmic LIO33_RS09160 PF02580 D-Tyr-tRNA(Tyr) deacylase LIO33_RS09165 PF04607 Region found in RelA / SpoT proteins LIO33_RS09165 PF02824 TGS domain LIO33_RS09165 PF13291 ACT domain LIO33_RS09170 PF02872 5'-nucleotidase, C-terminal domain LIO33_RS09170 PF00149 Calcineurin-like phosphoesterase LIO33_RS09215 PF04452 RNA methyltransferase LIO33_RS09240 PF16193 AAA C-terminal domain LIO33_RS09240 PF05496 Holliday junction DNA helicase RuvB P-loop domain LIO33_RS09240 PF12002 MgsA AAA+ ATPase C terminal LIO33_RS09265 PF02872 5'-nucleotidase, C-terminal domain LIO33_RS09265 PF00149 Calcineurin-like phosphoesterase LIO33_RS09270 PF03477 ATP cone domain LIO33_RS09270 PF13597 Anaerobic ribonucleoside-triphosphate reductase LIO33_RS09290 PF04397 LytTr DNA-binding domain LIO33_RS09295 PF01624 MutS domain I LIO33_RS09295 PF05188 MutS domain II LIO33_RS09295 PF05192 MutS domain III LIO33_RS09295 PF05190 MutS family domain IV LIO33_RS09295 PF00488 MutS domain V LIO33_RS09300 PF01316 Arginine repressor, DNA binding domain LIO33_RS09300 PF02863 Arginine repressor, C-terminal domain LIO33_RS09305 PF03485 Arginyl tRNA synthetase N terminal domain LIO33_RS09305 PF05746 DALR anticodon binding domain LIO33_RS09305 PF00750 tRNA synthetases class I (R) LIO33_RS09325 PF02446 4-alpha-glucanotransferase LIO33_RS09330 PF13416 Bacterial extracellular solute-binding protein LIO33_RS09335 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS09340 PF00528 Binding-protein-dependent transport system inner membrane component LIO33_RS09350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LIO33_RS09350 PF00356 Bacterial regulatory proteins, lacI family LIO33_RS09355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LIO33_RS09355 PF00128 Alpha amylase, catalytic domain LIO33_RS09355 PF17999 Pullulanase N1-terminal domain LIO33_RS09360 PF07972 NrdI Flavodoxin like LIO33_RS09365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIO33_RS09365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIO33_RS09370 PF02938 GAD domain LIO33_RS09370 PF00152 tRNA synthetases class II (D, K and N) LIO33_RS09370 PF01336 OB-fold nucleic acid binding domain LIO33_RS09375 PF13673 Acetyltransferase (GNAT) domain LIO33_RS09380 PF00248 Aldo/keto reductase family LIO33_RS09385 PF00535 Glycosyl transferase family 2 LIO33_RS09390 PF14310 Fibronectin type III-like domain LIO33_RS09390 PF00933 Glycosyl hydrolase family 3 N terminal domain LIO33_RS09390 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIO33_RS09400 PF14310 Fibronectin type III-like domain LIO33_RS09400 PF00933 Glycosyl hydrolase family 3 N terminal domain LIO33_RS09400 PF01915 Glycosyl hydrolase family 3 C-terminal domain LIO33_RS09405 PF00072 Response regulator receiver domain LIO33_RS09405 PF01339 CheB methylesterase LIO33_RS09420 PF00890 FAD binding domain LIO33_RS09420 PF14537 Cytochrome c3 LIO33_RS09430 PF00163 Ribosomal protein S4/S9 N-terminal domain LIO33_RS09430 PF01479 S4 domain LIO33_RS09440 PF00772 DnaB-like helicase N terminal domain LIO33_RS09440 PF03796 DnaB-like helicase C terminal domain LIO33_RS09445 PF03948 Ribosomal protein L9, C-terminal domain LIO33_RS09445 PF01281 Ribosomal protein L9, N-terminal domain LIO33_RS09450 PF01368 DHH family LIO33_RS09450 PF02272 DHHA1 domain LIO33_RS09455 PF13932 GidA associated domain LIO33_RS09455 PF01134 Glucose inhibited division protein A LIO33_RS09465 PF00293 NUDIX domain LIO33_RS09470 PF00293 NUDIX domain LIO33_RS09475 PF01638 HxlR-like helix-turn-helix LIO33_RS09490 PF01842 ACT domain LIO33_RS09490 PF03315 Serine dehydratase beta chain LIO33_RS09495 PF03313 Serine dehydratase alpha chain LIO33_RS09505 PF02361 Cobalt transport protein LIO33_RS09510 PF00005 ABC transporter LIO33_RS09515 PF00005 ABC transporter LIO33_RS09520 PF01066 CDP-alcohol phosphatidyltransferase LIO33_RS09525 PF13464 Domain of unknown function (DUF4115) LIO33_RS09530 PF00675 Insulinase (Peptidase family M16) LIO33_RS09530 PF05193 Peptidase M16 inactive domain LIO33_RS09535 PF05193 Peptidase M16 inactive domain LIO33_RS09545 PF02463 RecF/RecN/SMC N terminal domain LIO33_RS09550 PF00478 IMP dehydrogenase / GMP reductase domain LIO33_RS09550 PF00571 CBS domain LIO33_RS09555 PF00579 tRNA synthetases class I (W and Y) LIO33_RS09560 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LIO33_RS09560 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LIO33_RS09565 PF00005 ABC transporter LIO33_RS09565 PF12848 ABC transporter LIO33_RS09595 PF02590 Predicted SPOUT methyltransferase LIO33_RS09600 PF13180 PDZ domain LIO33_RS09605 PF17762 HTH domain found in ParB protein LIO33_RS09605 PF02195 ParB-like nuclease domain LIO33_RS09620 PF02899 Phage integrase, N-terminal SAM-like domain LIO33_RS09620 PF00589 Phage integrase family