##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2054196v1 #!genome-build-accession NCBI_Assembly:GCF_020541965.1 #!annotation-date 10/29/2022 05:22:14 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP085086.1 1 2081614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1307 NZ_CP085086.1 RefSeq region 1 2081614 . + . ID=NZ_CP085086.1:1..2081614;Dbxref=taxon:1307;Is_circular=true;Name=ANONYMOUS;collection-date=2017;country=Netherlands;gbkey=Src;genome=chromosome;isolation-source=Brain/blood;mol_type=genomic DNA;nat-host=Pig;strain=Ssuis_MA6 NZ_CP085086.1 RefSeq gene 1 1374 . + . ID=gene-LIO31_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LIO31_RS00005 NZ_CP085086.1 Protein Homology CDS 1 1374 . + 0 ID=cds-WP_023368958.1;Parent=gene-LIO31_RS00005;Dbxref=Genbank:WP_023368958.1;Name=WP_023368958.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195353.1;locus_tag=LIO31_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_023368958.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1528 2664 . + . ID=gene-LIO31_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LIO31_RS00010 NZ_CP085086.1 Protein Homology CDS 1528 2664 . + 0 ID=cds-WP_004194538.1;Parent=gene-LIO31_RS00010;Dbxref=Genbank:WP_004194538.1;Name=WP_004194538.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000581170.1;locus_tag=LIO31_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_004194538.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2756 3637 . + . ID=gene-LIO31_RS00015;Name=LIO31_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00015 NZ_CP085086.1 Protein Homology CDS 2756 3637 . + 0 ID=cds-WP_011921629.1;Parent=gene-LIO31_RS00015;Dbxref=Genbank:WP_011921629.1;Name=WP_011921629.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921629.1;locus_tag=LIO31_RS00015;product=diacylglycerol kinase family protein;protein_id=WP_011921629.1;transl_table=11 NZ_CP085086.1 RefSeq gene 3647 3850 . + . ID=gene-LIO31_RS00020;Name=LIO31_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00020 NZ_CP085086.1 Protein Homology CDS 3647 3850 . + 0 ID=cds-WP_011922523.1;Parent=gene-LIO31_RS00020;Dbxref=Genbank:WP_011922523.1;Name=WP_011922523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195358.1;locus_tag=LIO31_RS00020;product=DUF951 family protein;protein_id=WP_011922523.1;transl_table=11 NZ_CP085086.1 RefSeq gene 3954 4313 . + . ID=gene-LIO31_RS00025;Name=LIO31_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00025 NZ_CP085086.1 Protein Homology CDS 3954 4313 . + 0 ID=cds-WP_012774878.1;Parent=gene-LIO31_RS00025;Dbxref=Genbank:WP_012774878.1;Name=WP_012774878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775462.1;locus_tag=LIO31_RS00025;product=helix-turn-helix domain-containing protein;protein_id=WP_012774878.1;transl_table=11 NZ_CP085086.1 RefSeq gene 4399 5514 . + . ID=gene-LIO31_RS00030;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LIO31_RS00030 NZ_CP085086.1 Protein Homology CDS 4399 5514 . + 0 ID=cds-WP_012774879.1;Parent=gene-LIO31_RS00030;Dbxref=Genbank:WP_012774879.1;Name=WP_012774879.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=LIO31_RS00030;product=redox-regulated ATPase YchF;protein_id=WP_012774879.1;transl_table=11 NZ_CP085086.1 RefSeq gene 5672 6241 . + . ID=gene-LIO31_RS00035;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LIO31_RS00035 NZ_CP085086.1 Protein Homology CDS 5672 6241 . + 0 ID=cds-WP_011921633.1;Parent=gene-LIO31_RS00035;Dbxref=Genbank:WP_011921633.1;Name=WP_011921633.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163933.1;locus_tag=LIO31_RS00035;product=aminoacyl-tRNA hydrolase;protein_id=WP_011921633.1;transl_table=11 NZ_CP085086.1 RefSeq gene 6241 9735 . + . ID=gene-LIO31_RS00040;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LIO31_RS00040 NZ_CP085086.1 Protein Homology CDS 6241 9735 . + 0 ID=cds-WP_074389931.1;Parent=gene-LIO31_RS00040;Dbxref=Genbank:WP_074389931.1;Name=WP_074389931.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637243.1;locus_tag=LIO31_RS00040;product=transcription-repair coupling factor;protein_id=WP_074389931.1;transl_table=11 NZ_CP085086.1 RefSeq gene 9785 10057 . + . ID=gene-LIO31_RS00045;Name=LIO31_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00045 NZ_CP085086.1 Protein Homology CDS 9785 10057 . + 0 ID=cds-WP_004194330.1;Parent=gene-LIO31_RS00045;Dbxref=Genbank:WP_004194330.1;Name=WP_004194330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194330.1;locus_tag=LIO31_RS00045;product=RNA-binding S4 domain-containing protein;protein_id=WP_004194330.1;transl_table=11 NZ_CP085086.1 RefSeq gene 10044 10412 . + . ID=gene-LIO31_RS00050;Name=LIO31_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00050 NZ_CP085086.1 Protein Homology CDS 10044 10412 . + 0 ID=cds-WP_004194327.1;Parent=gene-LIO31_RS00050;Dbxref=Genbank:WP_004194327.1;Name=WP_004194327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735200.1;locus_tag=LIO31_RS00050;product=septum formation initiator family protein;protein_id=WP_004194327.1;transl_table=11 NZ_CP085086.1 RefSeq gene 10409 10522 . + . ID=gene-LIO31_RS10300;Name=LIO31_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10300 NZ_CP085086.1 Protein Homology CDS 10409 10522 . + 0 ID=cds-WP_004194325.1;Parent=gene-LIO31_RS10300;Dbxref=Genbank:WP_004194325.1;Name=WP_004194325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194325.1;locus_tag=LIO31_RS10300;product=SP_0009 family protein;protein_id=WP_004194325.1;transl_table=11 NZ_CP085086.1 RefSeq gene 10535 11815 . + . ID=gene-LIO31_RS00055;Name=LIO31_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00055 NZ_CP085086.1 Protein Homology CDS 10535 11815 . + 0 ID=cds-WP_011921635.1;Parent=gene-LIO31_RS00055;Dbxref=Genbank:WP_011921635.1;Name=WP_011921635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194321.1;locus_tag=LIO31_RS00055;product=serine hydrolase;protein_id=WP_011921635.1;transl_table=11 NZ_CP085086.1 RefSeq gene 11816 13084 . + . ID=gene-LIO31_RS00060;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LIO31_RS00060 NZ_CP085086.1 Protein Homology CDS 11816 13084 . + 0 ID=cds-WP_011921636.1;Parent=gene-LIO31_RS00060;Dbxref=Genbank:WP_011921636.1;Name=WP_011921636.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921636.1;locus_tag=LIO31_RS00060;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_011921636.1;transl_table=11 NZ_CP085086.1 RefSeq gene 13092 13634 . + . ID=gene-LIO31_RS00065;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LIO31_RS00065 NZ_CP085086.1 Protein Homology CDS 13092 13634 . + 0 ID=cds-WP_012775463.1;Parent=gene-LIO31_RS00065;Dbxref=Genbank:WP_012775463.1;Name=WP_012775463.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921637.1;locus_tag=LIO31_RS00065;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_012775463.1;transl_table=11 NZ_CP085086.1 RefSeq gene 13656 15629 . + . ID=gene-LIO31_RS00070;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LIO31_RS00070 NZ_CP085086.1 Protein Homology CDS 13656 15629 . + 0 ID=cds-WP_074389932.1;Parent=gene-LIO31_RS00070;Dbxref=Genbank:WP_074389932.1;Name=WP_074389932.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921638.1;locus_tag=LIO31_RS00070;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_074389932.1;transl_table=11 NZ_CP085086.1 RefSeq gene 15967 16437 . + . ID=gene-LIO31_RS00075;Name=LIO31_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00075 NZ_CP085086.1 Protein Homology CDS 15967 16437 . + 0 ID=cds-WP_011921639.1;Parent=gene-LIO31_RS00075;Dbxref=Genbank:WP_011921639.1;Name=WP_011921639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936602.1;locus_tag=LIO31_RS00075;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011921639.1;transl_table=11 NZ_CP085086.1 RefSeq gene 16969 18517 . + . ID=gene-LIO31_RS00080;Name=LIO31_RS00080;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS00080 NZ_CP085086.1 cmsearch rRNA 16969 18517 . + . ID=rna-LIO31_RS00080;Parent=gene-LIO31_RS00080;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00080;product=16S ribosomal RNA NZ_CP085086.1 cmsearch exon 16969 18517 . + . ID=exon-LIO31_RS00080-1;Parent=rna-LIO31_RS00080;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00080;product=16S ribosomal RNA NZ_CP085086.1 RefSeq gene 18571 18643 . + . ID=gene-LIO31_RS00085;Name=LIO31_RS00085;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00085 NZ_CP085086.1 tRNAscan-SE tRNA 18571 18643 . + . ID=rna-LIO31_RS00085;Parent=gene-LIO31_RS00085;anticodon=(pos:18604..18606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00085;product=tRNA-Ala NZ_CP085086.1 tRNAscan-SE exon 18571 18643 . + . ID=exon-LIO31_RS00085-1;Parent=rna-LIO31_RS00085;anticodon=(pos:18604..18606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00085;product=tRNA-Ala NZ_CP085086.1 RefSeq gene 18924 21827 . + . ID=gene-LIO31_RS00090;Name=LIO31_RS00090;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS00090 NZ_CP085086.1 cmsearch rRNA 18924 21827 . + . ID=rna-LIO31_RS00090;Parent=gene-LIO31_RS00090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00090;product=23S ribosomal RNA NZ_CP085086.1 cmsearch exon 18924 21827 . + . ID=exon-LIO31_RS00090-1;Parent=rna-LIO31_RS00090;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00090;product=23S ribosomal RNA NZ_CP085086.1 RefSeq gene 21914 22029 . + . ID=gene-LIO31_RS00095;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LIO31_RS00095 NZ_CP085086.1 cmsearch rRNA 21914 22029 . + . ID=rna-LIO31_RS00095;Parent=gene-LIO31_RS00095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00095;product=5S ribosomal RNA NZ_CP085086.1 cmsearch exon 21914 22029 . + . ID=exon-LIO31_RS00095-1;Parent=rna-LIO31_RS00095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00095;product=5S ribosomal RNA NZ_CP085086.1 RefSeq gene 22035 22107 . + . ID=gene-LIO31_RS00100;Name=LIO31_RS00100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00100 NZ_CP085086.1 tRNAscan-SE tRNA 22035 22107 . + . ID=rna-LIO31_RS00100;Parent=gene-LIO31_RS00100;anticodon=(pos:22068..22070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00100;product=tRNA-Val NZ_CP085086.1 tRNAscan-SE exon 22035 22107 . + . ID=exon-LIO31_RS00100-1;Parent=rna-LIO31_RS00100;anticodon=(pos:22068..22070);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00100;product=tRNA-Val NZ_CP085086.1 RefSeq gene 22110 22182 . + . ID=gene-LIO31_RS00105;Name=LIO31_RS00105;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00105 NZ_CP085086.1 tRNAscan-SE tRNA 22110 22182 . + . ID=rna-LIO31_RS00105;Parent=gene-LIO31_RS00105;anticodon=(pos:22143..22145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00105;product=tRNA-Asp NZ_CP085086.1 tRNAscan-SE exon 22110 22182 . + . ID=exon-LIO31_RS00105-1;Parent=rna-LIO31_RS00105;anticodon=(pos:22143..22145);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00105;product=tRNA-Asp NZ_CP085086.1 RefSeq gene 22228 22300 . + . ID=gene-LIO31_RS00110;Name=LIO31_RS00110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00110 NZ_CP085086.1 tRNAscan-SE tRNA 22228 22300 . + . ID=rna-LIO31_RS00110;Parent=gene-LIO31_RS00110;anticodon=(pos:22261..22263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00110;product=tRNA-Lys NZ_CP085086.1 tRNAscan-SE exon 22228 22300 . + . ID=exon-LIO31_RS00110-1;Parent=rna-LIO31_RS00110;anticodon=(pos:22261..22263);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00110;product=tRNA-Lys NZ_CP085086.1 RefSeq gene 22304 22385 . + . ID=gene-LIO31_RS00115;Name=LIO31_RS00115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00115 NZ_CP085086.1 tRNAscan-SE tRNA 22304 22385 . + . ID=rna-LIO31_RS00115;Parent=gene-LIO31_RS00115;anticodon=(pos:22338..22340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00115;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 22304 22385 . + . ID=exon-LIO31_RS00115-1;Parent=rna-LIO31_RS00115;anticodon=(pos:22338..22340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00115;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 22400 22472 . + . ID=gene-LIO31_RS00120;Name=LIO31_RS00120;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00120 NZ_CP085086.1 tRNAscan-SE tRNA 22400 22472 . + . ID=rna-LIO31_RS00120;Parent=gene-LIO31_RS00120;anticodon=(pos:22433..22435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00120;product=tRNA-Thr NZ_CP085086.1 tRNAscan-SE exon 22400 22472 . + . ID=exon-LIO31_RS00120-1;Parent=rna-LIO31_RS00120;anticodon=(pos:22433..22435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00120;product=tRNA-Thr NZ_CP085086.1 RefSeq gene 22485 22556 . + . ID=gene-LIO31_RS00125;Name=LIO31_RS00125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00125 NZ_CP085086.1 tRNAscan-SE tRNA 22485 22556 . + . ID=rna-LIO31_RS00125;Parent=gene-LIO31_RS00125;anticodon=(pos:22517..22519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00125;product=tRNA-Gly NZ_CP085086.1 tRNAscan-SE exon 22485 22556 . + . ID=exon-LIO31_RS00125-1;Parent=rna-LIO31_RS00125;anticodon=(pos:22517..22519);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00125;product=tRNA-Gly NZ_CP085086.1 RefSeq gene 22564 22647 . + . ID=gene-LIO31_RS00130;Name=LIO31_RS00130;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00130 NZ_CP085086.1 tRNAscan-SE tRNA 22564 22647 . + . ID=rna-LIO31_RS00130;Parent=gene-LIO31_RS00130;anticodon=(pos:22598..22600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00130;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 22564 22647 . + . ID=exon-LIO31_RS00130-1;Parent=rna-LIO31_RS00130;anticodon=(pos:22598..22600);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00130;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 22666 22739 . + . ID=gene-LIO31_RS00135;Name=LIO31_RS00135;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00135 NZ_CP085086.1 tRNAscan-SE tRNA 22666 22739 . + . ID=rna-LIO31_RS00135;Parent=gene-LIO31_RS00135;anticodon=(pos:22700..22702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00135;product=tRNA-Arg NZ_CP085086.1 tRNAscan-SE exon 22666 22739 . + . ID=exon-LIO31_RS00135-1;Parent=rna-LIO31_RS00135;anticodon=(pos:22700..22702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00135;product=tRNA-Arg NZ_CP085086.1 RefSeq gene 22787 22860 . + . ID=gene-LIO31_RS00140;Name=LIO31_RS00140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00140 NZ_CP085086.1 tRNAscan-SE tRNA 22787 22860 . + . ID=rna-LIO31_RS00140;Parent=gene-LIO31_RS00140;anticodon=(pos:22821..22823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00140;product=tRNA-Pro NZ_CP085086.1 tRNAscan-SE exon 22787 22860 . + . ID=exon-LIO31_RS00140-1;Parent=rna-LIO31_RS00140;anticodon=(pos:22821..22823);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00140;product=tRNA-Pro NZ_CP085086.1 RefSeq gene 22873 22946 . + . ID=gene-LIO31_RS00145;Name=LIO31_RS00145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00145 NZ_CP085086.1 tRNAscan-SE tRNA 22873 22946 . + . ID=rna-LIO31_RS00145;Parent=gene-LIO31_RS00145;anticodon=(pos:22907..22909);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00145;product=tRNA-Met NZ_CP085086.1 tRNAscan-SE exon 22873 22946 . + . ID=exon-LIO31_RS00145-1;Parent=rna-LIO31_RS00145;anticodon=(pos:22907..22909);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00145;product=tRNA-Met NZ_CP085086.1 RefSeq gene 22963 23036 . + . ID=gene-LIO31_RS00150;Name=LIO31_RS00150;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00150 NZ_CP085086.1 tRNAscan-SE tRNA 22963 23036 . + . ID=rna-LIO31_RS00150;Parent=gene-LIO31_RS00150;anticodon=(pos:22997..22999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00150;product=tRNA-Ile NZ_CP085086.1 tRNAscan-SE exon 22963 23036 . + . ID=exon-LIO31_RS00150-1;Parent=rna-LIO31_RS00150;anticodon=(pos:22997..22999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00150;product=tRNA-Ile NZ_CP085086.1 RefSeq gene 23043 23132 . + . ID=gene-LIO31_RS00155;Name=LIO31_RS00155;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00155 NZ_CP085086.1 tRNAscan-SE tRNA 23043 23132 . + . ID=rna-LIO31_RS00155;Parent=gene-LIO31_RS00155;anticodon=(pos:23079..23081);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00155;product=tRNA-Ser NZ_CP085086.1 tRNAscan-SE exon 23043 23132 . + . ID=exon-LIO31_RS00155-1;Parent=rna-LIO31_RS00155;anticodon=(pos:23079..23081);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00155;product=tRNA-Ser NZ_CP085086.1 RefSeq gene 23143 23216 . + . ID=gene-LIO31_RS00160;Name=LIO31_RS00160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00160 NZ_CP085086.1 tRNAscan-SE tRNA 23143 23216 . + . ID=rna-LIO31_RS00160;Parent=gene-LIO31_RS00160;anticodon=(pos:23177..23179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00160;product=tRNA-Met NZ_CP085086.1 tRNAscan-SE exon 23143 23216 . + . ID=exon-LIO31_RS00160-1;Parent=rna-LIO31_RS00160;anticodon=(pos:23177..23179);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00160;product=tRNA-Met NZ_CP085086.1 RefSeq gene 23232 23304 . + . ID=gene-LIO31_RS00165;Name=LIO31_RS00165;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00165 NZ_CP085086.1 tRNAscan-SE tRNA 23232 23304 . + . ID=rna-LIO31_RS00165;Parent=gene-LIO31_RS00165;anticodon=(pos:23265..23267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00165;product=tRNA-Phe NZ_CP085086.1 tRNAscan-SE exon 23232 23304 . + . ID=exon-LIO31_RS00165-1;Parent=rna-LIO31_RS00165;anticodon=(pos:23265..23267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00165;product=tRNA-Phe NZ_CP085086.1 RefSeq gene 23336 23409 . + . ID=gene-LIO31_RS00170;Name=LIO31_RS00170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00170 NZ_CP085086.1 tRNAscan-SE tRNA 23336 23409 . + . ID=rna-LIO31_RS00170;Parent=gene-LIO31_RS00170;anticodon=(pos:23370..23372);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00170;product=tRNA-Ile NZ_CP085086.1 tRNAscan-SE exon 23336 23409 . + . ID=exon-LIO31_RS00170-1;Parent=rna-LIO31_RS00170;anticodon=(pos:23370..23372);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00170;product=tRNA-Ile NZ_CP085086.1 RefSeq gene 23422 23509 . + . ID=gene-LIO31_RS00175;Name=LIO31_RS00175;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00175 NZ_CP085086.1 tRNAscan-SE tRNA 23422 23509 . + . ID=rna-LIO31_RS00175;Parent=gene-LIO31_RS00175;anticodon=(pos:23456..23458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00175;product=tRNA-Ser NZ_CP085086.1 tRNAscan-SE exon 23422 23509 . + . ID=exon-LIO31_RS00175-1;Parent=rna-LIO31_RS00175;anticodon=(pos:23456..23458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00175;product=tRNA-Ser NZ_CP085086.1 RefSeq gene 23569 24405 . + . ID=gene-LIO31_RS00180;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LIO31_RS00180 NZ_CP085086.1 Protein Homology CDS 23569 24405 . + 0 ID=cds-WP_012775464.1;Parent=gene-LIO31_RS00180;Dbxref=Genbank:WP_012775464.1;Name=WP_012775464.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637248.1;locus_tag=LIO31_RS00180;product=rod shape-determining protein MreC;protein_id=WP_012775464.1;transl_table=11 NZ_CP085086.1 RefSeq gene 24407 24910 . + . ID=gene-LIO31_RS00185;Name=LIO31_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00185 NZ_CP085086.1 Protein Homology CDS 24407 24910 . + 0 ID=cds-WP_228380208.1;Parent=gene-LIO31_RS00185;Dbxref=Genbank:WP_228380208.1;Name=WP_228380208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016019.2;locus_tag=LIO31_RS00185;product=rod shape-determining protein MreD;protein_id=WP_228380208.1;transl_table=11 NZ_CP085086.1 RefSeq gene 24995 26251 . + . ID=gene-LIO31_RS00190;Name=LIO31_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00190 NZ_CP085086.1 Protein Homology CDS 24995 26251 . + 0 ID=cds-WP_012774880.1;Parent=gene-LIO31_RS00190;Dbxref=Genbank:WP_012774880.1;Name=WP_012774880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735207.1;locus_tag=LIO31_RS00190;product=CHAP domain-containing protein;protein_id=WP_012774880.1;transl_table=11 NZ_CP085086.1 RefSeq gene 26354 27322 . + . ID=gene-LIO31_RS00195;Name=LIO31_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00195 NZ_CP085086.1 Protein Homology CDS 26354 27322 . + 0 ID=cds-WP_002935337.1;Parent=gene-LIO31_RS00195;Dbxref=Genbank:WP_002935337.1;Name=WP_002935337.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195376.1;locus_tag=LIO31_RS00195;product=ribose-phosphate diphosphokinase;protein_id=WP_002935337.1;transl_table=11 NZ_CP085086.1 RefSeq gene 27409 28587 . + . ID=gene-LIO31_RS00200;Name=LIO31_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00200 NZ_CP085086.1 Protein Homology CDS 27409 28587 . + 0 ID=cds-WP_024405849.1;Parent=gene-LIO31_RS00200;Dbxref=Genbank:WP_024405849.1;Name=WP_024405849.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195378.1;locus_tag=LIO31_RS00200;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_024405849.1;transl_table=11 NZ_CP085086.1 RefSeq gene 28574 29356 . + . ID=gene-LIO31_RS00205;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LIO31_RS00205 NZ_CP085086.1 Protein Homology CDS 28574 29356 . + 0 ID=cds-WP_074389617.1;Parent=gene-LIO31_RS00205;Dbxref=Genbank:WP_074389617.1;Name=WP_074389617.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735211.1;locus_tag=LIO31_RS00205;product=DNA repair protein RecO;protein_id=WP_074389617.1;transl_table=11 NZ_CP085086.1 RefSeq gene 29353 30360 . + . ID=gene-LIO31_RS00210;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LIO31_RS00210 NZ_CP085086.1 Protein Homology CDS 29353 30360 . + 0 ID=cds-WP_011921644.1;Parent=gene-LIO31_RS00210;Dbxref=Genbank:WP_011921644.1;Name=WP_011921644.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735212.1;locus_tag=LIO31_RS00210;product=phosphate acyltransferase PlsX;protein_id=WP_011921644.1;transl_table=11 NZ_CP085086.1 RefSeq gene 30353 30601 . + . ID=gene-LIO31_RS00215;Name=LIO31_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00215 NZ_CP085086.1 Protein Homology CDS 30353 30601 . + 0 ID=cds-WP_011921645.1;Parent=gene-LIO31_RS00215;Dbxref=Genbank:WP_011921645.1;Name=WP_011921645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921645.1;locus_tag=LIO31_RS00215;product=phosphopantetheine-binding protein;protein_id=WP_011921645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 30719 31426 . + . ID=gene-LIO31_RS00220;Name=LIO31_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00220 NZ_CP085086.1 Protein Homology CDS 30719 31426 . + 0 ID=cds-WP_011921646.1;Parent=gene-LIO31_RS00220;Dbxref=Genbank:WP_011921646.1;Name=WP_011921646.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043309.1;locus_tag=LIO31_RS00220;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_011921646.1;transl_table=11 NZ_CP085086.1 RefSeq gene 31439 35158 . + . ID=gene-LIO31_RS00225;Name=LIO31_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00225 NZ_CP085086.1 Protein Homology CDS 31439 35158 . + 0 ID=cds-WP_074389017.1;Parent=gene-LIO31_RS00225;Dbxref=Genbank:WP_074389017.1;Name=WP_074389017.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042262.1;locus_tag=LIO31_RS00225;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_074389017.1;transl_table=11 NZ_CP085086.1 RefSeq gene 35161 36615 . + . ID=gene-LIO31_RS00230;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LIO31_RS00230 NZ_CP085086.1 Protein Homology CDS 35161 36615 . + 0 ID=cds-WP_074389616.1;Parent=gene-LIO31_RS00230;Dbxref=Genbank:WP_074389616.1;Name=WP_074389616.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908857.1;locus_tag=LIO31_RS00230;product=amidophosphoribosyltransferase;protein_id=WP_074389616.1;transl_table=11 NZ_CP085086.1 RefSeq gene 36671 37693 . + . ID=gene-LIO31_RS00235;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LIO31_RS00235 NZ_CP085086.1 Protein Homology CDS 36671 37693 . + 0 ID=cds-WP_012774882.1;Parent=gene-LIO31_RS00235;Dbxref=Genbank:WP_012774882.1;Name=WP_012774882.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729529.1;locus_tag=LIO31_RS00235;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_012774882.1;transl_table=11 NZ_CP085086.1 RefSeq gene 37690 38241 . + . ID=gene-LIO31_RS00240;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LIO31_RS00240 NZ_CP085086.1 Protein Homology CDS 37690 38241 . + 0 ID=cds-WP_011922533.1;Parent=gene-LIO31_RS00240;Dbxref=Genbank:WP_011922533.1;Name=WP_011922533.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646221.1;locus_tag=LIO31_RS00240;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_011922533.1;transl_table=11 NZ_CP085086.1 RefSeq gene 38251 39798 . + . ID=gene-LIO31_RS00245;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LIO31_RS00245 NZ_CP085086.1 Protein Homology CDS 38251 39798 . + 0 ID=cds-WP_011921652.1;Parent=gene-LIO31_RS00245;Dbxref=Genbank:WP_011921652.1;Name=WP_011921652.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=LIO31_RS00245;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_011921652.1;transl_table=11 NZ_CP085086.1 RefSeq gene 39924 41186 . + . ID=gene-LIO31_RS00250;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LIO31_RS00250 NZ_CP085086.1 Protein Homology CDS 39924 41186 . + 0 ID=cds-WP_014917169.1;Parent=gene-LIO31_RS00250;Dbxref=Genbank:WP_014917169.1;Name=WP_014917169.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009660198.1;locus_tag=LIO31_RS00250;product=phosphoribosylamine--glycine ligase;protein_id=WP_014917169.1;transl_table=11 NZ_CP085086.1 RefSeq gene 41212 41700 . + . ID=gene-LIO31_RS00255;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LIO31_RS00255 NZ_CP085086.1 Protein Homology CDS 41212 41700 . + 0 ID=cds-WP_011921654.1;Parent=gene-LIO31_RS00255;Dbxref=Genbank:WP_011921654.1;Name=WP_011921654.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637265.1;locus_tag=LIO31_RS00255;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011921654.1;transl_table=11 NZ_CP085086.1 RefSeq gene 41687 42766 . + . ID=gene-LIO31_RS00260;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=LIO31_RS00260 NZ_CP085086.1 Protein Homology CDS 41687 42766 . + 0 ID=cds-WP_012774883.1;Parent=gene-LIO31_RS00260;Dbxref=Genbank:WP_012774883.1;Name=WP_012774883.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774883.1;locus_tag=LIO31_RS00260;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_012774883.1;transl_table=11 NZ_CP085086.1 RefSeq gene 42810 43571 . + . ID=gene-LIO31_RS00265;Name=LIO31_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00265 NZ_CP085086.1 Protein Homology CDS 42810 43571 . + 0 ID=cds-WP_011921656.1;Parent=gene-LIO31_RS00265;Dbxref=Genbank:WP_011921656.1;Name=WP_011921656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921656.1;locus_tag=LIO31_RS00265;product=hypothetical protein;protein_id=WP_011921656.1;transl_table=11 NZ_CP085086.1 RefSeq gene 43644 44870 . + . ID=gene-LIO31_RS00270;Name=LIO31_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00270 NZ_CP085086.1 Protein Homology CDS 43644 44870 . + 0 ID=cds-WP_024405853.1;Parent=gene-LIO31_RS00270;Dbxref=Genbank:WP_024405853.1;Name=WP_024405853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922536.1;locus_tag=LIO31_RS00270;product=hypothetical protein;protein_id=WP_024405853.1;transl_table=11 NZ_CP085086.1 RefSeq gene 44872 46164 . + . ID=gene-LIO31_RS00275;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LIO31_RS00275 NZ_CP085086.1 Protein Homology CDS 44872 46164 . + 0 ID=cds-WP_011921659.1;Parent=gene-LIO31_RS00275;Dbxref=Genbank:WP_011921659.1;Name=WP_011921659.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636187.1;locus_tag=LIO31_RS00275;product=adenylosuccinate lyase;protein_id=WP_011921659.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 46971 47630 . + . ID=gene-LIO31_RS00280;Name=LIO31_RS00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS00280;partial=true;pseudo=true;start_range=.,46971 NZ_CP085086.1 Protein Homology CDS 46971 47630 . + 0 ID=cds-LIO31_RS00280;Parent=gene-LIO31_RS00280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646233.1;locus_tag=LIO31_RS00280;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,46971;transl_table=11 NZ_CP085086.1 RefSeq gene 47636 48409 . + . ID=gene-LIO31_RS00285;Name=LIO31_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00285 NZ_CP085086.1 Protein Homology CDS 47636 48409 . + 0 ID=cds-WP_012775420.1;Parent=gene-LIO31_RS00285;Dbxref=Genbank:WP_012775420.1;Name=WP_012775420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775420.1;locus_tag=LIO31_RS00285;product=membrane protein;protein_id=WP_012775420.1;transl_table=11 NZ_CP085086.1 RefSeq gene 48412 50124 . + . ID=gene-LIO31_RS00290;Name=LIO31_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00290 NZ_CP085086.1 Protein Homology CDS 48412 50124 . + 0 ID=cds-WP_074389012.1;Parent=gene-LIO31_RS00290;Dbxref=Genbank:WP_074389012.1;Name=WP_074389012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636189.1;locus_tag=LIO31_RS00290;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389012.1;transl_table=11 NZ_CP085086.1 RefSeq gene 50226 50399 . + . ID=gene-LIO31_RS00295;Name=LIO31_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00295 NZ_CP085086.1 Protein Homology CDS 50226 50399 . + 0 ID=cds-WP_011921669.1;Parent=gene-LIO31_RS00295;Dbxref=Genbank:WP_011921669.1;Name=WP_011921669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921669.1;locus_tag=LIO31_RS00295;product=hypothetical protein;protein_id=WP_011921669.1;transl_table=11 NZ_CP085086.1 RefSeq gene 50694 51695 . + . ID=gene-LIO31_RS00300;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LIO31_RS00300 NZ_CP085086.1 Protein Homology CDS 50694 51695 . + 0 ID=cds-WP_024405856.1;Parent=gene-LIO31_RS00300;Dbxref=Genbank:WP_024405856.1;Name=WP_024405856.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195448.1;locus_tag=LIO31_RS00300;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_024405856.1;transl_table=11 NZ_CP085086.1 RefSeq gene 51695 52441 . + . ID=gene-LIO31_RS00305;Name=LIO31_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00305 NZ_CP085086.1 Protein Homology CDS 51695 52441 . + 0 ID=cds-WP_024405857.1;Parent=gene-LIO31_RS00305;Dbxref=Genbank:WP_024405857.1;Name=WP_024405857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935299.1;locus_tag=LIO31_RS00305;product=GNAT family N-acetyltransferase;protein_id=WP_024405857.1;transl_table=11 NZ_CP085086.1 RefSeq gene 52443 53078 . + . ID=gene-LIO31_RS00310;Name=LIO31_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00310 NZ_CP085086.1 Protein Homology CDS 52443 53078 . + 0 ID=cds-WP_024405858.1;Parent=gene-LIO31_RS00310;Dbxref=Genbank:WP_024405858.1;Name=WP_024405858.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735242.1;locus_tag=LIO31_RS00310;product=HAD-IA family hydrolase;protein_id=WP_024405858.1;transl_table=11 NZ_CP085086.1 RefSeq gene 53325 54224 . + . ID=gene-LIO31_RS00315;Name=LIO31_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00315 NZ_CP085086.1 Protein Homology CDS 53325 54224 . + 0 ID=cds-WP_074389615.1;Parent=gene-LIO31_RS00315;Dbxref=Genbank:WP_074389615.1;Name=WP_074389615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774888.1;locus_tag=LIO31_RS00315;product=helix-turn-helix domain-containing protein;protein_id=WP_074389615.1;transl_table=11 NZ_CP085086.1 RefSeq gene 54850 55788 . - . ID=gene-LIO31_RS00320;Name=LIO31_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00320 NZ_CP085086.1 Protein Homology CDS 54850 55788 . - 0 ID=cds-WP_011921674.1;Parent=gene-LIO31_RS00320;Dbxref=Genbank:WP_011921674.1;Name=WP_011921674.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937360.1;locus_tag=LIO31_RS00320;product=IS4 family transposase;protein_id=WP_011921674.1;transl_table=11 NZ_CP085086.1 RefSeq gene 55928 57148 . + . ID=gene-LIO31_RS00325;Name=LIO31_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00325 NZ_CP085086.1 Protein Homology CDS 55928 57148 . + 0 ID=cds-WP_074389014.1;Parent=gene-LIO31_RS00325;Dbxref=Genbank:WP_074389014.1;Name=WP_074389014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646239.1;locus_tag=LIO31_RS00325;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_074389014.1;transl_table=11 NZ_CP085086.1 RefSeq gene 57339 58862 . + . ID=gene-LIO31_RS00330;Name=LIO31_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00330 NZ_CP085086.1 Protein Homology CDS 57339 58862 . + 0 ID=cds-WP_024405860.1;Parent=gene-LIO31_RS00330;Dbxref=Genbank:WP_024405860.1;Name=WP_024405860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646241.1;locus_tag=LIO31_RS00330;product=quinol oxidase;protein_id=WP_024405860.1;transl_table=11 NZ_CP085086.1 RefSeq gene 58980 60917 . + . ID=gene-LIO31_RS00335;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LIO31_RS00335 NZ_CP085086.1 Protein Homology CDS 58980 60917 . + 0 ID=cds-WP_012774891.1;Parent=gene-LIO31_RS00335;Dbxref=Genbank:WP_012774891.1;Name=WP_012774891.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637283.1;locus_tag=LIO31_RS00335;product=DNA mismatch repair endonuclease MutL;protein_id=WP_012774891.1;transl_table=11 NZ_CP085086.1 RefSeq gene 60956 61546 . + . ID=gene-LIO31_RS00340;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LIO31_RS00340 NZ_CP085086.1 Protein Homology CDS 60956 61546 . + 0 ID=cds-WP_011921679.1;Parent=gene-LIO31_RS00340;Dbxref=Genbank:WP_011921679.1;Name=WP_011921679.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271492.1;locus_tag=LIO31_RS00340;product=Holliday junction branch migration protein RuvA;protein_id=WP_011921679.1;transl_table=11 NZ_CP085086.1 RefSeq gene 62271 62840 . + . ID=gene-LIO31_RS00345;Name=LIO31_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00345 NZ_CP085086.1 Protein Homology CDS 62271 62840 . + 0 ID=cds-WP_012774893.1;Parent=gene-LIO31_RS00345;Dbxref=Genbank:WP_012774893.1;Name=WP_012774893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774893.1;locus_tag=LIO31_RS00345;product=DNA-3-methyladenine glycosylase I;protein_id=WP_012774893.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 62877 64048 . + . ID=gene-LIO31_RS00350;Name=LIO31_RS00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS00350;pseudo=true NZ_CP085086.1 Protein Homology CDS 62877 64048 . + 0 ID=cds-LIO31_RS00350;Parent=gene-LIO31_RS00350;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194467.1;locus_tag=LIO31_RS00350;product=competence/damage-inducible protein A;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 64100 65248 . + . ID=gene-LIO31_RS00355;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LIO31_RS00355 NZ_CP085086.1 Protein Homology CDS 64100 65248 . + 0 ID=cds-WP_023369045.1;Parent=gene-LIO31_RS00355;Dbxref=Genbank:WP_023369045.1;Name=WP_023369045.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085741.1;locus_tag=LIO31_RS00355;product=recombinase RecA;protein_id=WP_023369045.1;transl_table=11 NZ_CP085086.1 RefSeq gene 65484 65882 . + . ID=gene-LIO31_RS00360;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=LIO31_RS00360 NZ_CP085086.1 Protein Homology CDS 65484 65882 . + 0 ID=cds-WP_002939362.1;Parent=gene-LIO31_RS00360;Dbxref=Genbank:WP_002939362.1;Name=WP_002939362.1;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768833.1;locus_tag=LIO31_RS00360;product=transcriptional regulator Spx;protein_id=WP_002939362.1;transl_table=11 NZ_CP085086.1 RefSeq gene 65982 66248 . + . ID=gene-LIO31_RS00365;Name=LIO31_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00365 NZ_CP085086.1 Protein Homology CDS 65982 66248 . + 0 ID=cds-WP_002939360.1;Parent=gene-LIO31_RS00365;Dbxref=Genbank:WP_002939360.1;Name=WP_002939360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885737.1;locus_tag=LIO31_RS00365;product=IreB family regulatory phosphoprotein;protein_id=WP_002939360.1;transl_table=11 NZ_CP085086.1 RefSeq gene 66248 66667 . + . ID=gene-LIO31_RS00370;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LIO31_RS00370 NZ_CP085086.1 Protein Homology CDS 66248 66667 . + 0 ID=cds-WP_002939356.1;Parent=gene-LIO31_RS00370;Dbxref=Genbank:WP_002939356.1;Name=WP_002939356.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939356.1;locus_tag=LIO31_RS00370;product=Holliday junction resolvase RuvX;protein_id=WP_002939356.1;transl_table=11 NZ_CP085086.1 RefSeq gene 66679 67011 . + . ID=gene-LIO31_RS00375;Name=LIO31_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00375 NZ_CP085086.1 Protein Homology CDS 66679 67011 . + 0 ID=cds-WP_074389614.1;Parent=gene-LIO31_RS00375;Dbxref=Genbank:WP_074389614.1;Name=WP_074389614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735256.1;locus_tag=LIO31_RS00375;product=DUF1292 domain-containing protein;protein_id=WP_074389614.1;transl_table=11 NZ_CP085086.1 RefSeq gene 67218 67796 . + . ID=gene-LIO31_RS00380;Name=LIO31_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00380 NZ_CP085086.1 Protein Homology CDS 67218 67796 . + 0 ID=cds-WP_012774895.1;Parent=gene-LIO31_RS00380;Dbxref=Genbank:WP_012774895.1;Name=WP_012774895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774895.1;locus_tag=LIO31_RS00380;product=nucleotidyltransferase family protein;protein_id=WP_012774895.1;transl_table=11 NZ_CP085086.1 RefSeq gene 67869 68135 . + . ID=gene-LIO31_RS00385;Name=LIO31_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00385 NZ_CP085086.1 Protein Homology CDS 67869 68135 . + 0 ID=cds-WP_014635810.1;Parent=gene-LIO31_RS00385;Dbxref=Genbank:WP_014635810.1;Name=WP_014635810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014635810.1;locus_tag=LIO31_RS00385;product=hypothetical protein;protein_id=WP_014635810.1;transl_table=11 NZ_CP085086.1 RefSeq gene 68458 68766 . + . ID=gene-LIO31_RS00390;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LIO31_RS00390 NZ_CP085086.1 Protein Homology CDS 68458 68766 . + 0 ID=cds-WP_014735259.1;Parent=gene-LIO31_RS00390;Dbxref=Genbank:WP_014735259.1;Name=WP_014735259.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=LIO31_RS00390;product=30S ribosomal protein S10;protein_id=WP_014735259.1;transl_table=11 NZ_CP085086.1 RefSeq gene 68903 69529 . + . ID=gene-LIO31_RS00395;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LIO31_RS00395 NZ_CP085086.1 Protein Homology CDS 68903 69529 . + 0 ID=cds-WP_011921686.1;Parent=gene-LIO31_RS00395;Dbxref=Genbank:WP_011921686.1;Name=WP_011921686.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=LIO31_RS00395;product=50S ribosomal protein L3;protein_id=WP_011921686.1;transl_table=11 NZ_CP085086.1 RefSeq gene 69554 70177 . + . ID=gene-LIO31_RS00400;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LIO31_RS00400 NZ_CP085086.1 Protein Homology CDS 69554 70177 . + 0 ID=cds-WP_004195490.1;Parent=gene-LIO31_RS00400;Dbxref=Genbank:WP_004195490.1;Name=WP_004195490.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=LIO31_RS00400;product=50S ribosomal protein L4;protein_id=WP_004195490.1;transl_table=11 NZ_CP085086.1 RefSeq gene 70177 70476 . + . ID=gene-LIO31_RS00405;Name=LIO31_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00405 NZ_CP085086.1 Protein Homology CDS 70177 70476 . + 0 ID=cds-WP_004195491.1;Parent=gene-LIO31_RS00405;Dbxref=Genbank:WP_004195491.1;Name=WP_004195491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=LIO31_RS00405;product=50S ribosomal protein L23;protein_id=WP_004195491.1;transl_table=11 NZ_CP085086.1 RefSeq gene 70494 71327 . + . ID=gene-LIO31_RS00410;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LIO31_RS00410 NZ_CP085086.1 Protein Homology CDS 70494 71327 . + 0 ID=cds-WP_002936663.1;Parent=gene-LIO31_RS00410;Dbxref=Genbank:WP_002936663.1;Name=WP_002936663.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=LIO31_RS00410;product=50S ribosomal protein L2;protein_id=WP_002936663.1;transl_table=11 NZ_CP085086.1 RefSeq gene 71578 71859 . + . ID=gene-LIO31_RS00415;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LIO31_RS00415 NZ_CP085086.1 Protein Homology CDS 71578 71859 . + 0 ID=cds-WP_000533766.1;Parent=gene-LIO31_RS00415;Dbxref=Genbank:WP_000533766.1;Name=WP_000533766.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533767.1;locus_tag=LIO31_RS00415;product=30S ribosomal protein S19;protein_id=WP_000533766.1;transl_table=11 NZ_CP085086.1 RefSeq gene 71877 72221 . + . ID=gene-LIO31_RS00420;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LIO31_RS00420 NZ_CP085086.1 Protein Homology CDS 71877 72221 . + 0 ID=cds-WP_002936662.1;Parent=gene-LIO31_RS00420;Dbxref=Genbank:WP_002936662.1;Name=WP_002936662.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=LIO31_RS00420;product=50S ribosomal protein L22;protein_id=WP_002936662.1;transl_table=11 NZ_CP085086.1 RefSeq gene 72234 72887 . + . ID=gene-LIO31_RS00425;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LIO31_RS00425 NZ_CP085086.1 Protein Homology CDS 72234 72887 . + 0 ID=cds-WP_002936661.1;Parent=gene-LIO31_RS00425;Dbxref=Genbank:WP_002936661.1;Name=WP_002936661.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=LIO31_RS00425;product=30S ribosomal protein S3;protein_id=WP_002936661.1;transl_table=11 NZ_CP085086.1 RefSeq gene 72891 73304 . + . ID=gene-LIO31_RS00430;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LIO31_RS00430 NZ_CP085086.1 Protein Homology CDS 72891 73304 . + 0 ID=cds-WP_002936660.1;Parent=gene-LIO31_RS00430;Dbxref=Genbank:WP_002936660.1;Name=WP_002936660.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=LIO31_RS00430;product=50S ribosomal protein L16;protein_id=WP_002936660.1;transl_table=11 NZ_CP085086.1 RefSeq gene 73314 73520 . + . ID=gene-LIO31_RS00435;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LIO31_RS00435 NZ_CP085086.1 Protein Homology CDS 73314 73520 . + 0 ID=cds-WP_024377707.1;Parent=gene-LIO31_RS00435;Dbxref=Genbank:WP_024377707.1;Name=WP_024377707.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739716.1;locus_tag=LIO31_RS00435;product=50S ribosomal protein L29;protein_id=WP_024377707.1;transl_table=11 NZ_CP085086.1 RefSeq gene 73544 73804 . + . ID=gene-LIO31_RS00440;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LIO31_RS00440 NZ_CP085086.1 Protein Homology CDS 73544 73804 . + 0 ID=cds-WP_000440801.1;Parent=gene-LIO31_RS00440;Dbxref=Genbank:WP_000440801.1;Name=WP_000440801.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=LIO31_RS00440;product=30S ribosomal protein S17;protein_id=WP_000440801.1;transl_table=11 NZ_CP085086.1 RefSeq gene 73829 74197 . + . ID=gene-LIO31_RS00445;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LIO31_RS00445 NZ_CP085086.1 Protein Homology CDS 73829 74197 . + 0 ID=cds-WP_002936658.1;Parent=gene-LIO31_RS00445;Dbxref=Genbank:WP_002936658.1;Name=WP_002936658.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=LIO31_RS00445;product=50S ribosomal protein L14;protein_id=WP_002936658.1;transl_table=11 NZ_CP085086.1 RefSeq gene 74336 74641 . + . ID=gene-LIO31_RS00450;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LIO31_RS00450 NZ_CP085086.1 Protein Homology CDS 74336 74641 . + 0 ID=cds-WP_014637292.1;Parent=gene-LIO31_RS00450;Dbxref=Genbank:WP_014637292.1;Name=WP_014637292.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=LIO31_RS00450;product=50S ribosomal protein L24;protein_id=WP_014637292.1;transl_table=11 NZ_CP085086.1 RefSeq gene 74665 75207 . + . ID=gene-LIO31_RS00455;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LIO31_RS00455 NZ_CP085086.1 Protein Homology CDS 74665 75207 . + 0 ID=cds-WP_002936653.1;Parent=gene-LIO31_RS00455;Dbxref=Genbank:WP_002936653.1;Name=WP_002936653.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=LIO31_RS00455;product=50S ribosomal protein L5;protein_id=WP_002936653.1;transl_table=11 NZ_CP085086.1 RefSeq gene 75222 75407 . + . ID=gene-LIO31_RS00460;Name=LIO31_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00460 NZ_CP085086.1 Protein Homology CDS 75222 75407 . + 0 ID=cds-WP_002936651.1;Parent=gene-LIO31_RS00460;Dbxref=Genbank:WP_002936651.1;Name=WP_002936651.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=LIO31_RS00460;product=type Z 30S ribosomal protein S14;protein_id=WP_002936651.1;transl_table=11 NZ_CP085086.1 RefSeq gene 75744 76142 . + . ID=gene-LIO31_RS00465;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LIO31_RS00465 NZ_CP085086.1 Protein Homology CDS 75744 76142 . + 0 ID=cds-WP_002936647.1;Parent=gene-LIO31_RS00465;Dbxref=Genbank:WP_002936647.1;Name=WP_002936647.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=LIO31_RS00465;product=30S ribosomal protein S8;protein_id=WP_002936647.1;transl_table=11 NZ_CP085086.1 RefSeq gene 76458 76994 . + . ID=gene-LIO31_RS00470;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LIO31_RS00470 NZ_CP085086.1 Protein Homology CDS 76458 76994 . + 0 ID=cds-WP_024405862.1;Parent=gene-LIO31_RS00470;Dbxref=Genbank:WP_024405862.1;Name=WP_024405862.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=LIO31_RS00470;product=50S ribosomal protein L6;protein_id=WP_024405862.1;transl_table=11 NZ_CP085086.1 RefSeq gene 77083 77439 . + . ID=gene-LIO31_RS00475;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LIO31_RS00475 NZ_CP085086.1 Protein Homology CDS 77083 77439 . + 0 ID=cds-WP_002936641.1;Parent=gene-LIO31_RS00475;Dbxref=Genbank:WP_002936641.1;Name=WP_002936641.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374469.1;locus_tag=LIO31_RS00475;product=50S ribosomal protein L18;protein_id=WP_002936641.1;transl_table=11 NZ_CP085086.1 RefSeq gene 77458 77952 . + . ID=gene-LIO31_RS00480;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LIO31_RS00480 NZ_CP085086.1 Protein Homology CDS 77458 77952 . + 0 ID=cds-WP_002936639.1;Parent=gene-LIO31_RS00480;Dbxref=Genbank:WP_002936639.1;Name=WP_002936639.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=LIO31_RS00480;product=30S ribosomal protein S5;protein_id=WP_002936639.1;transl_table=11 NZ_CP085086.1 RefSeq gene 77967 78149 . + . ID=gene-LIO31_RS00485;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LIO31_RS00485 NZ_CP085086.1 Protein Homology CDS 77967 78149 . + 0 ID=cds-WP_002936638.1;Parent=gene-LIO31_RS00485;Dbxref=Genbank:WP_002936638.1;Name=WP_002936638.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376783.1;locus_tag=LIO31_RS00485;product=50S ribosomal protein L30;protein_id=WP_002936638.1;transl_table=11 NZ_CP085086.1 RefSeq gene 78285 78725 . + . ID=gene-LIO31_RS00490;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LIO31_RS00490 NZ_CP085086.1 Protein Homology CDS 78285 78725 . + 0 ID=cds-WP_002936637.1;Parent=gene-LIO31_RS00490;Dbxref=Genbank:WP_002936637.1;Name=WP_002936637.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225266.1;locus_tag=LIO31_RS00490;product=50S ribosomal protein L15;protein_id=WP_002936637.1;transl_table=11 NZ_CP085086.1 RefSeq gene 78739 80049 . + . ID=gene-LIO31_RS00495;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LIO31_RS00495 NZ_CP085086.1 Protein Homology CDS 78739 80049 . + 0 ID=cds-WP_002936636.1;Parent=gene-LIO31_RS00495;Dbxref=Genbank:WP_002936636.1;Name=WP_002936636.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195506.1;locus_tag=LIO31_RS00495;product=preprotein translocase subunit SecY;protein_id=WP_002936636.1;transl_table=11 NZ_CP085086.1 RefSeq gene 80143 80784 . + . ID=gene-LIO31_RS00500;Name=LIO31_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00500 NZ_CP085086.1 Protein Homology CDS 80143 80784 . + 0 ID=cds-WP_002936630.1;Parent=gene-LIO31_RS00500;Dbxref=Genbank:WP_002936630.1;Name=WP_002936630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050429.1;locus_tag=LIO31_RS00500;product=adenylate kinase;protein_id=WP_002936630.1;transl_table=11 NZ_CP085086.1 RefSeq gene 80906 81124 . + . ID=gene-LIO31_RS00505;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LIO31_RS00505 NZ_CP085086.1 Protein Homology CDS 80906 81124 . + 0 ID=cds-WP_002936627.1;Parent=gene-LIO31_RS00505;Dbxref=Genbank:WP_002936627.1;Name=WP_002936627.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1;locus_tag=LIO31_RS00505;product=translation initiation factor IF-1;protein_id=WP_002936627.1;transl_table=11 NZ_CP085086.1 RefSeq gene 81149 81265 . + . ID=gene-LIO31_RS00510;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LIO31_RS00510 NZ_CP085086.1 Protein Homology CDS 81149 81265 . + 0 ID=cds-WP_001808836.1;Parent=gene-LIO31_RS00510;Dbxref=Genbank:WP_001808836.1;Name=WP_001808836.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=LIO31_RS00510;product=50S ribosomal protein L36;protein_id=WP_001808836.1;transl_table=11 NZ_CP085086.1 RefSeq gene 81285 81650 . + . ID=gene-LIO31_RS00515;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LIO31_RS00515 NZ_CP085086.1 Protein Homology CDS 81285 81650 . + 0 ID=cds-WP_002936622.1;Parent=gene-LIO31_RS00515;Dbxref=Genbank:WP_002936622.1;Name=WP_002936622.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=LIO31_RS00515;product=30S ribosomal protein S13;protein_id=WP_002936622.1;transl_table=11 NZ_CP085086.1 RefSeq gene 81668 82051 . + . ID=gene-LIO31_RS00520;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LIO31_RS00520 NZ_CP085086.1 Protein Homology CDS 81668 82051 . + 0 ID=cds-WP_004195509.1;Parent=gene-LIO31_RS00520;Dbxref=Genbank:WP_004195509.1;Name=WP_004195509.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003130556.1;locus_tag=LIO31_RS00520;product=30S ribosomal protein S11;protein_id=WP_004195509.1;transl_table=11 NZ_CP085086.1 RefSeq gene 82096 83034 . + . ID=gene-LIO31_RS00525;Name=LIO31_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00525 NZ_CP085086.1 Protein Homology CDS 82096 83034 . + 0 ID=cds-WP_011921691.1;Parent=gene-LIO31_RS00525;Dbxref=Genbank:WP_011921691.1;Name=WP_011921691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=LIO31_RS00525;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_011921691.1;transl_table=11 NZ_CP085086.1 RefSeq gene 83049 83435 . + . ID=gene-LIO31_RS00530;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LIO31_RS00530 NZ_CP085086.1 Protein Homology CDS 83049 83435 . + 0 ID=cds-WP_000331493.1;Parent=gene-LIO31_RS00530;Dbxref=Genbank:WP_000331493.1;Name=WP_000331493.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=LIO31_RS00530;product=50S ribosomal protein L17;protein_id=WP_000331493.1;transl_table=11 NZ_CP085086.1 RefSeq gene 83746 84609 . + . ID=gene-LIO31_RS00535;Name=LIO31_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00535 NZ_CP085086.1 Protein Homology CDS 83746 84609 . + 0 ID=cds-WP_024405863.1;Parent=gene-LIO31_RS00535;Dbxref=Genbank:WP_024405863.1;Name=WP_024405863.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=LIO31_RS00535;product=IS982 family transposase;protein_id=WP_024405863.1;transl_table=11 NZ_CP085086.1 RefSeq gene 84816 85286 . + . ID=gene-LIO31_RS00540;Name=LIO31_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00540 NZ_CP085086.1 Protein Homology CDS 84816 85286 . + 0 ID=cds-WP_011921639.1-2;Parent=gene-LIO31_RS00540;Dbxref=Genbank:WP_011921639.1;Name=WP_011921639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936602.1;locus_tag=LIO31_RS00540;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_011921639.1;transl_table=11 NZ_CP085086.1 RefSeq gene 85818 87366 . + . ID=gene-LIO31_RS00545;Name=LIO31_RS00545;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS00545 NZ_CP085086.1 cmsearch rRNA 85818 87366 . + . ID=rna-LIO31_RS00545;Parent=gene-LIO31_RS00545;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00545;product=16S ribosomal RNA NZ_CP085086.1 cmsearch exon 85818 87366 . + . ID=exon-LIO31_RS00545-1;Parent=rna-LIO31_RS00545;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00545;product=16S ribosomal RNA NZ_CP085086.1 RefSeq gene 87420 87492 . + . ID=gene-LIO31_RS00550;Name=LIO31_RS00550;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00550 NZ_CP085086.1 tRNAscan-SE tRNA 87420 87492 . + . ID=rna-LIO31_RS00550;Parent=gene-LIO31_RS00550;anticodon=(pos:87453..87455);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00550;product=tRNA-Ala NZ_CP085086.1 tRNAscan-SE exon 87420 87492 . + . ID=exon-LIO31_RS00550-1;Parent=rna-LIO31_RS00550;anticodon=(pos:87453..87455);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00550;product=tRNA-Ala NZ_CP085086.1 RefSeq gene 87773 90676 . + . ID=gene-LIO31_RS00555;Name=LIO31_RS00555;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS00555 NZ_CP085086.1 cmsearch rRNA 87773 90676 . + . ID=rna-LIO31_RS00555;Parent=gene-LIO31_RS00555;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00555;product=23S ribosomal RNA NZ_CP085086.1 cmsearch exon 87773 90676 . + . ID=exon-LIO31_RS00555-1;Parent=rna-LIO31_RS00555;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00555;product=23S ribosomal RNA NZ_CP085086.1 RefSeq gene 90763 90878 . + . ID=gene-LIO31_RS00560;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LIO31_RS00560 NZ_CP085086.1 cmsearch rRNA 90763 90878 . + . ID=rna-LIO31_RS00560;Parent=gene-LIO31_RS00560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00560;product=5S ribosomal RNA NZ_CP085086.1 cmsearch exon 90763 90878 . + . ID=exon-LIO31_RS00560-1;Parent=rna-LIO31_RS00560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS00560;product=5S ribosomal RNA NZ_CP085086.1 RefSeq gene 90884 90956 . + . ID=gene-LIO31_RS00565;Name=LIO31_RS00565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00565 NZ_CP085086.1 tRNAscan-SE tRNA 90884 90956 . + . ID=rna-LIO31_RS00565;Parent=gene-LIO31_RS00565;anticodon=(pos:90917..90919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00565;product=tRNA-Val NZ_CP085086.1 tRNAscan-SE exon 90884 90956 . + . ID=exon-LIO31_RS00565-1;Parent=rna-LIO31_RS00565;anticodon=(pos:90917..90919);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00565;product=tRNA-Val NZ_CP085086.1 RefSeq gene 90962 91032 . + . ID=gene-LIO31_RS00570;Name=LIO31_RS00570;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00570 NZ_CP085086.1 tRNAscan-SE tRNA 90962 91032 . + . ID=rna-LIO31_RS00570;Parent=gene-LIO31_RS00570;anticodon=(pos:90994..90996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00570;product=tRNA-Gly NZ_CP085086.1 tRNAscan-SE exon 90962 91032 . + . ID=exon-LIO31_RS00570-1;Parent=rna-LIO31_RS00570;anticodon=(pos:90994..90996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00570;product=tRNA-Gly NZ_CP085086.1 RefSeq gene 91063 91136 . + . ID=gene-LIO31_RS00575;Name=LIO31_RS00575;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00575 NZ_CP085086.1 tRNAscan-SE tRNA 91063 91136 . + . ID=rna-LIO31_RS00575;Parent=gene-LIO31_RS00575;anticodon=(pos:91097..91099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00575;product=tRNA-Ile NZ_CP085086.1 tRNAscan-SE exon 91063 91136 . + . ID=exon-LIO31_RS00575-1;Parent=rna-LIO31_RS00575;anticodon=(pos:91097..91099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00575;product=tRNA-Ile NZ_CP085086.1 RefSeq gene 91143 91214 . + . ID=gene-LIO31_RS00580;Name=LIO31_RS00580;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00580 NZ_CP085086.1 tRNAscan-SE tRNA 91143 91214 . + . ID=rna-LIO31_RS00580;Parent=gene-LIO31_RS00580;anticodon=(pos:91176..91178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00580;product=tRNA-Glu NZ_CP085086.1 tRNAscan-SE exon 91143 91214 . + . ID=exon-LIO31_RS00580-1;Parent=rna-LIO31_RS00580;anticodon=(pos:91176..91178);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00580;product=tRNA-Glu NZ_CP085086.1 RefSeq gene 91223 91312 . + . ID=gene-LIO31_RS00585;Name=LIO31_RS00585;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00585 NZ_CP085086.1 tRNAscan-SE tRNA 91223 91312 . + . ID=rna-LIO31_RS00585;Parent=gene-LIO31_RS00585;anticodon=(pos:91259..91261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00585;product=tRNA-Ser NZ_CP085086.1 tRNAscan-SE exon 91223 91312 . + . ID=exon-LIO31_RS00585-1;Parent=rna-LIO31_RS00585;anticodon=(pos:91259..91261);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00585;product=tRNA-Ser NZ_CP085086.1 RefSeq gene 91322 91395 . + . ID=gene-LIO31_RS00590;Name=LIO31_RS00590;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00590 NZ_CP085086.1 tRNAscan-SE tRNA 91322 91395 . + . ID=rna-LIO31_RS00590;Parent=gene-LIO31_RS00590;anticodon=(pos:91356..91358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00590;product=tRNA-Met NZ_CP085086.1 tRNAscan-SE exon 91322 91395 . + . ID=exon-LIO31_RS00590-1;Parent=rna-LIO31_RS00590;anticodon=(pos:91356..91358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00590;product=tRNA-Met NZ_CP085086.1 RefSeq gene 91411 91483 . + . ID=gene-LIO31_RS00595;Name=LIO31_RS00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00595 NZ_CP085086.1 tRNAscan-SE tRNA 91411 91483 . + . ID=rna-LIO31_RS00595;Parent=gene-LIO31_RS00595;anticodon=(pos:91444..91446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00595;product=tRNA-Phe NZ_CP085086.1 tRNAscan-SE exon 91411 91483 . + . ID=exon-LIO31_RS00595-1;Parent=rna-LIO31_RS00595;anticodon=(pos:91444..91446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00595;product=tRNA-Phe NZ_CP085086.1 RefSeq gene 91504 91584 . + . ID=gene-LIO31_RS00600;Name=LIO31_RS00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00600 NZ_CP085086.1 tRNAscan-SE tRNA 91504 91584 . + . ID=rna-LIO31_RS00600;Parent=gene-LIO31_RS00600;anticodon=(pos:91538..91540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00600;product=tRNA-Tyr NZ_CP085086.1 tRNAscan-SE exon 91504 91584 . + . ID=exon-LIO31_RS00600-1;Parent=rna-LIO31_RS00600;anticodon=(pos:91538..91540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00600;product=tRNA-Tyr NZ_CP085086.1 RefSeq gene 91592 91662 . + . ID=gene-LIO31_RS00605;Name=LIO31_RS00605;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00605 NZ_CP085086.1 tRNAscan-SE tRNA 91592 91662 . + . ID=rna-LIO31_RS00605;Parent=gene-LIO31_RS00605;anticodon=(pos:91624..91626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00605;product=tRNA-Trp NZ_CP085086.1 tRNAscan-SE exon 91592 91662 . + . ID=exon-LIO31_RS00605-1;Parent=rna-LIO31_RS00605;anticodon=(pos:91624..91626);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00605;product=tRNA-Trp NZ_CP085086.1 RefSeq gene 91670 91742 . + . ID=gene-LIO31_RS00610;Name=LIO31_RS00610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00610 NZ_CP085086.1 tRNAscan-SE tRNA 91670 91742 . + . ID=rna-LIO31_RS00610;Parent=gene-LIO31_RS00610;anticodon=(pos:91703..91705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00610;product=tRNA-His NZ_CP085086.1 tRNAscan-SE exon 91670 91742 . + . ID=exon-LIO31_RS00610-1;Parent=rna-LIO31_RS00610;anticodon=(pos:91703..91705);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00610;product=tRNA-His NZ_CP085086.1 RefSeq gene 91754 91825 . + . ID=gene-LIO31_RS00615;Name=LIO31_RS00615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00615 NZ_CP085086.1 tRNAscan-SE tRNA 91754 91825 . + . ID=rna-LIO31_RS00615;Parent=gene-LIO31_RS00615;anticodon=(pos:91786..91788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00615;product=tRNA-Gln NZ_CP085086.1 tRNAscan-SE exon 91754 91825 . + . ID=exon-LIO31_RS00615-1;Parent=rna-LIO31_RS00615;anticodon=(pos:91786..91788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00615;product=tRNA-Gln NZ_CP085086.1 RefSeq gene 91837 91920 . + . ID=gene-LIO31_RS00620;Name=LIO31_RS00620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS00620 NZ_CP085086.1 tRNAscan-SE tRNA 91837 91920 . + . ID=rna-LIO31_RS00620;Parent=gene-LIO31_RS00620;anticodon=(pos:91871..91873);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00620;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 91837 91920 . + . ID=exon-LIO31_RS00620-1;Parent=rna-LIO31_RS00620;anticodon=(pos:91871..91873);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS00620;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 92017 93150 . - . ID=gene-LIO31_RS00625;Name=LIO31_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00625 NZ_CP085086.1 Protein Homology CDS 92017 93150 . - 0 ID=cds-WP_226960912.1;Parent=gene-LIO31_RS00625;Dbxref=Genbank:WP_226960912.1;Name=WP_226960912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155506.1;locus_tag=LIO31_RS00625;product=tyrosine-type recombinase/integrase;protein_id=WP_226960912.1;transl_table=11 NZ_CP085086.1 RefSeq gene 93140 93346 . - . ID=gene-LIO31_RS00630;Name=LIO31_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00630 NZ_CP085086.1 Protein Homology CDS 93140 93346 . - 0 ID=cds-WP_043914709.1;Parent=gene-LIO31_RS00630;Dbxref=Genbank:WP_043914709.1;Name=WP_043914709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921695.1;locus_tag=LIO31_RS00630;product=DUF3173 domain-containing protein;protein_id=WP_043914709.1;transl_table=11 NZ_CP085086.1 RefSeq gene 93360 94142 . - . ID=gene-LIO31_RS00635;Name=LIO31_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00635 NZ_CP085086.1 Protein Homology CDS 93360 94142 . - 0 ID=cds-WP_014334293.1;Parent=gene-LIO31_RS00635;Dbxref=Genbank:WP_014334293.1;Name=WP_014334293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195527.1;locus_tag=LIO31_RS00635;product=Rep protein;protein_id=WP_014334293.1;transl_table=11 NZ_CP085086.1 RefSeq gene 94325 94639 . - . ID=gene-LIO31_RS00640;Name=LIO31_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00640 NZ_CP085086.1 Protein Homology CDS 94325 94639 . - 0 ID=cds-WP_018377892.1;Parent=gene-LIO31_RS00640;Dbxref=Genbank:WP_018377892.1;Name=WP_018377892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195544.1;locus_tag=LIO31_RS00640;product=hypothetical protein;protein_id=WP_018377892.1;transl_table=11 NZ_CP085086.1 RefSeq gene 94736 96100 . - . ID=gene-LIO31_RS00645;Name=LIO31_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00645 NZ_CP085086.1 Protein Homology CDS 94736 96100 . - 0 ID=cds-WP_226960913.1;Parent=gene-LIO31_RS00645;Dbxref=Genbank:WP_226960913.1;Name=WP_226960913.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767014.1;locus_tag=LIO31_RS00645;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_226960913.1;transl_table=11 NZ_CP085086.1 RefSeq gene 96057 96293 . - . ID=gene-LIO31_RS00650;Name=LIO31_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00650 NZ_CP085086.1 Protein Homology CDS 96057 96293 . - 0 ID=cds-WP_226960914.1;Parent=gene-LIO31_RS00650;Dbxref=Genbank:WP_226960914.1;Name=WP_226960914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774901.1;locus_tag=LIO31_RS00650;product=hypothetical protein;protein_id=WP_226960914.1;transl_table=11 NZ_CP085086.1 RefSeq gene 96356 96667 . - . ID=gene-LIO31_RS00655;Name=LIO31_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00655 NZ_CP085086.1 Protein Homology CDS 96356 96667 . - 0 ID=cds-WP_226960915.1;Parent=gene-LIO31_RS00655;Dbxref=Genbank:WP_226960915.1;Name=WP_226960915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014334296.1;locus_tag=LIO31_RS00655;product=hypothetical protein;protein_id=WP_226960915.1;transl_table=11 NZ_CP085086.1 RefSeq gene 96839 97219 . - . ID=gene-LIO31_RS00660;Name=LIO31_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00660 NZ_CP085086.1 Protein Homology CDS 96839 97219 . - 0 ID=cds-WP_226960916.1;Parent=gene-LIO31_RS00660;Dbxref=Genbank:WP_226960916.1;Name=WP_226960916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222554.1;locus_tag=LIO31_RS00660;product=hypothetical protein;protein_id=WP_226960916.1;transl_table=11 NZ_CP085086.1 RefSeq gene 97602 98384 . + . ID=gene-LIO31_RS00665;Name=LIO31_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00665 NZ_CP085086.1 Protein Homology CDS 97602 98384 . + 0 ID=cds-WP_012774903.1;Parent=gene-LIO31_RS00665;Dbxref=Genbank:WP_012774903.1;Name=WP_012774903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774903.1;locus_tag=LIO31_RS00665;product=DUF2971 domain-containing protein;protein_id=WP_012774903.1;transl_table=11 NZ_CP085086.1 RefSeq gene 98381 98650 . - . ID=gene-LIO31_RS00670;Name=LIO31_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00670 NZ_CP085086.1 Protein Homology CDS 98381 98650 . - 0 ID=cds-WP_171840746.1;Parent=gene-LIO31_RS00670;Dbxref=Genbank:WP_171840746.1;Name=WP_171840746.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LIO31_RS00670;product=tyrosine-type recombinase/integrase;protein_id=WP_171840746.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 98652 98750 . + . ID=gene-LIO31_RS00675;Name=LIO31_RS00675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS00675;partial=true;pseudo=true;start_range=.,98652 NZ_CP085086.1 Protein Homology CDS 98652 98750 . + 0 ID=cds-LIO31_RS00675;Parent=gene-LIO31_RS00675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226747.1;locus_tag=LIO31_RS00675;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,98652;transl_table=11 NZ_CP085086.1 RefSeq gene 99105 99548 . + . ID=gene-LIO31_RS00680;Name=LIO31_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00680 NZ_CP085086.1 Protein Homology CDS 99105 99548 . + 0 ID=cds-WP_012774904.1;Parent=gene-LIO31_RS00680;Dbxref=Genbank:WP_012774904.1;Name=WP_012774904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195554.1;locus_tag=LIO31_RS00680;product=zinc-dependent MarR family transcriptional regulator;protein_id=WP_012774904.1;transl_table=11 NZ_CP085086.1 RefSeq gene 99549 100253 . + . ID=gene-LIO31_RS00685;Name=LIO31_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00685 NZ_CP085086.1 Protein Homology CDS 99549 100253 . + 0 ID=cds-WP_002936595.1;Parent=gene-LIO31_RS00685;Dbxref=Genbank:WP_002936595.1;Name=WP_002936595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936595.1;locus_tag=LIO31_RS00685;product=metal ABC transporter ATP-binding protein;protein_id=WP_002936595.1;transl_table=11 NZ_CP085086.1 RefSeq gene 100246 101058 . + . ID=gene-LIO31_RS00690;Name=LIO31_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00690 NZ_CP085086.1 Protein Homology CDS 100246 101058 . + 0 ID=cds-WP_002936593.1;Parent=gene-LIO31_RS00690;Dbxref=Genbank:WP_002936593.1;Name=WP_002936593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195557.1;locus_tag=LIO31_RS00690;product=metal ABC transporter permease;protein_id=WP_002936593.1;transl_table=11 NZ_CP085086.1 RefSeq gene 101068 102579 . + . ID=gene-LIO31_RS00695;Name=LIO31_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00695 NZ_CP085086.1 Protein Homology CDS 101068 102579 . + 0 ID=cds-WP_024379086.1;Parent=gene-LIO31_RS00695;Dbxref=Genbank:WP_024379086.1;Name=WP_024379086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724057.1;locus_tag=LIO31_RS00695;product=zinc ABC transporter substrate-binding protein AdcA;protein_id=WP_024379086.1;transl_table=11 NZ_CP085086.1 RefSeq gene 102682 103152 . + . ID=gene-LIO31_RS00700;Name=LIO31_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00700 NZ_CP085086.1 Protein Homology CDS 102682 103152 . + 0 ID=cds-WP_014636197.1;Parent=gene-LIO31_RS00700;Dbxref=Genbank:WP_014636197.1;Name=WP_014636197.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636197.1;locus_tag=LIO31_RS00700;product=CopY/TcrY family copper transport repressor;protein_id=WP_014636197.1;transl_table=11 NZ_CP085086.1 RefSeq gene 103333 103542 . + . ID=gene-LIO31_RS00705;Name=LIO31_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00705 NZ_CP085086.1 Protein Homology CDS 103333 103542 . + 0 ID=cds-WP_011921708.1;Parent=gene-LIO31_RS00705;Dbxref=Genbank:WP_011921708.1;Name=WP_011921708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921708.1;locus_tag=LIO31_RS00705;product=heavy-metal-associated domain-containing protein;protein_id=WP_011921708.1;transl_table=11 NZ_CP085086.1 RefSeq gene 103570 103947 . - . ID=gene-LIO31_RS00710;Name=LIO31_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00710 NZ_CP085086.1 Protein Homology CDS 103570 103947 . - 0 ID=cds-WP_012774905.1;Parent=gene-LIO31_RS00710;Dbxref=Genbank:WP_012774905.1;Name=WP_012774905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646263.1;locus_tag=LIO31_RS00710;product=HIT family protein;protein_id=WP_012774905.1;transl_table=11 NZ_CP085086.1 RefSeq gene 104005 105261 . - . ID=gene-LIO31_RS00715;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LIO31_RS00715 NZ_CP085086.1 Protein Homology CDS 104005 105261 . - 0 ID=cds-WP_074389608.1;Parent=gene-LIO31_RS00715;Dbxref=Genbank:WP_074389608.1;Name=WP_074389608.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184085.1;locus_tag=LIO31_RS00715;product=tyrosine--tRNA ligase;protein_id=WP_074389608.1;transl_table=11 NZ_CP085086.1 RefSeq gene 105415 107838 . + . ID=gene-LIO31_RS00720;Name=pbp1b;gbkey=Gene;gene=pbp1b;gene_biotype=protein_coding;locus_tag=LIO31_RS00720 NZ_CP085086.1 Protein Homology CDS 105415 107838 . + 0 ID=cds-WP_011921713.1;Parent=gene-LIO31_RS00720;Dbxref=Genbank:WP_011921713.1;Name=WP_011921713.1;gbkey=CDS;gene=pbp1b;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735285.1;locus_tag=LIO31_RS00720;product=penicillin-binding protein PBP1B;protein_id=WP_011921713.1;transl_table=11 NZ_CP085086.1 RefSeq gene 108473 112045 . + . ID=gene-LIO31_RS00725;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LIO31_RS00725 NZ_CP085086.1 Protein Homology CDS 108473 112045 . + 0 ID=cds-WP_002936570.1;Parent=gene-LIO31_RS00725;Dbxref=Genbank:WP_002936570.1;Name=WP_002936570.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730074.1;locus_tag=LIO31_RS00725;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_002936570.1;transl_table=11 NZ_CP085086.1 RefSeq gene 112223 115870 . + . ID=gene-LIO31_RS00730;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LIO31_RS00730 NZ_CP085086.1 Protein Homology CDS 112223 115870 . + 0 ID=cds-WP_226960917.1;Parent=gene-LIO31_RS00730;Dbxref=Genbank:WP_226960917.1;Name=WP_226960917.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774906.1;locus_tag=LIO31_RS00730;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_226960917.1;transl_table=11 NZ_CP085086.1 RefSeq gene 116020 116385 . + . ID=gene-LIO31_RS00735;Name=LIO31_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00735 NZ_CP085086.1 Protein Homology CDS 116020 116385 . + 0 ID=cds-WP_002936568.1;Parent=gene-LIO31_RS00735;Dbxref=Genbank:WP_002936568.1;Name=WP_002936568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195575.1;locus_tag=LIO31_RS00735;product=DUF1033 family protein;protein_id=WP_002936568.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 116420 117363 . - . ID=gene-LIO31_RS00740;Name=LIO31_RS00740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS00740;pseudo=true NZ_CP085086.1 Protein Homology CDS 116420 117363 . - 0 ID=cds-LIO31_RS00740;Parent=gene-LIO31_RS00740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936565.1;locus_tag=LIO31_RS00740;product=LD-carboxypeptidase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 117449 118399 . + . ID=gene-LIO31_RS00745;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=LIO31_RS00745 NZ_CP085086.1 Protein Homology CDS 117449 118399 . + 0 ID=cds-WP_011921718.1;Parent=gene-LIO31_RS00745;Dbxref=Genbank:WP_011921718.1;Name=WP_011921718.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646270.1;locus_tag=LIO31_RS00745;product=competence type IV pilus ATPase ComGA;protein_id=WP_011921718.1;transl_table=11 NZ_CP085086.1 RefSeq gene 118311 119348 . + . ID=gene-LIO31_RS00750;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=LIO31_RS00750 NZ_CP085086.1 Protein Homology CDS 118311 119348 . + 0 ID=cds-WP_256770774.1;Parent=gene-LIO31_RS00750;Dbxref=Genbank:WP_256770774.1;Name=WP_256770774.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921719.1;locus_tag=LIO31_RS00750;product=competence type IV pilus assembly protein ComGB;protein_id=WP_256770774.1;transl_table=11 NZ_CP085086.1 RefSeq gene 119350 119631 . + . ID=gene-LIO31_RS00755;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=LIO31_RS00755 NZ_CP085086.1 Protein Homology CDS 119350 119631 . + 0 ID=cds-WP_011921720.1;Parent=gene-LIO31_RS00755;Dbxref=Genbank:WP_011921720.1;Name=WP_011921720.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646272.1;locus_tag=LIO31_RS00755;product=competence type IV pilus major pilin ComGC;protein_id=WP_011921720.1;transl_table=11 NZ_CP085086.1 RefSeq gene 119612 120019 . + . ID=gene-LIO31_RS00760;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=LIO31_RS00760 NZ_CP085086.1 Protein Homology CDS 119612 120019 . + 0 ID=cds-WP_011921721.1;Parent=gene-LIO31_RS00760;Dbxref=Genbank:WP_011921721.1;Name=WP_011921721.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195585.1;locus_tag=LIO31_RS00760;product=competence type IV pilus minor pilin ComGD;protein_id=WP_011921721.1;transl_table=11 NZ_CP085086.1 RefSeq gene 119991 120284 . + . ID=gene-LIO31_RS00765;Name=comGE;gbkey=Gene;gene=comGE;gene_biotype=protein_coding;locus_tag=LIO31_RS00765 NZ_CP085086.1 Protein Homology CDS 119991 120284 . + 0 ID=cds-WP_011921722.1;Parent=gene-LIO31_RS00765;Dbxref=Genbank:WP_011921722.1;Name=WP_011921722.1;gbkey=CDS;gene=comGE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002282213.1;locus_tag=LIO31_RS00765;product=competence type IV pilus minor pilin ComGE;protein_id=WP_011921722.1;transl_table=11 NZ_CP085086.1 RefSeq gene 120271 120705 . + . ID=gene-LIO31_RS00770;Name=comGF;gbkey=Gene;gene=comGF;gene_biotype=protein_coding;locus_tag=LIO31_RS00770 NZ_CP085086.1 Protein Homology CDS 120271 120705 . + 0 ID=cds-WP_011922561.1;Parent=gene-LIO31_RS00770;Dbxref=Genbank:WP_011922561.1;Name=WP_011922561.1;gbkey=CDS;gene=comGF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922561.1;locus_tag=LIO31_RS00770;product=competence type IV pilus minor pilin ComGF;protein_id=WP_011922561.1;transl_table=11 NZ_CP085086.1 RefSeq gene 120683 121093 . + . ID=gene-LIO31_RS00775;Name=comGG;gbkey=Gene;gene=comGG;gene_biotype=protein_coding;locus_tag=LIO31_RS00775 NZ_CP085086.1 Protein Homology CDS 120683 121093 . + 0 ID=cds-WP_011921724.1;Parent=gene-LIO31_RS00775;Dbxref=Genbank:WP_011921724.1;Name=WP_011921724.1;gbkey=CDS;gene=comGG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909099.1;locus_tag=LIO31_RS00775;product=competence type IV pilus minor pilin ComGG;protein_id=WP_011921724.1;transl_table=11 NZ_CP085086.1 RefSeq gene 121150 122103 . + . ID=gene-LIO31_RS00780;Name=LIO31_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00780 NZ_CP085086.1 Protein Homology CDS 121150 122103 . + 0 ID=cds-WP_024406069.1;Parent=gene-LIO31_RS00780;Dbxref=Genbank:WP_024406069.1;Name=WP_024406069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735295.1;locus_tag=LIO31_RS00780;product=class I SAM-dependent methyltransferase;protein_id=WP_024406069.1;transl_table=11 NZ_CP085086.1 RefSeq gene 122153 123340 . + . ID=gene-LIO31_RS00785;Name=LIO31_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00785 NZ_CP085086.1 Protein Homology CDS 122153 123340 . + 0 ID=cds-WP_012775473.1;Parent=gene-LIO31_RS00785;Dbxref=Genbank:WP_012775473.1;Name=WP_012775473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921727.1;locus_tag=LIO31_RS00785;product=acetate kinase;protein_id=WP_012775473.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 123466 123610 . + . ID=id-NZ_CP085086.1:123466..123610;Dbxref=RFAM:RF01831;Note=THF riboswitches regulate genes encoding folate transporters and folate metabolism%3B They are most commonly found in Clostridiales and Lactobacillales;bound_moiety=tetrahydrofolate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 123654 124205 . + . ID=gene-LIO31_RS00790;Name=LIO31_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00790 NZ_CP085086.1 Protein Homology CDS 123654 124205 . + 0 ID=cds-WP_012775474.1;Parent=gene-LIO31_RS00790;Dbxref=Genbank:WP_012775474.1;Name=WP_012775474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936541.1;locus_tag=LIO31_RS00790;product=folate family ECF transporter S component;protein_id=WP_012775474.1;transl_table=11 NZ_CP085086.1 RefSeq gene 124261 125517 . + . ID=gene-LIO31_RS00795;Name=LIO31_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00795 NZ_CP085086.1 Protein Homology CDS 124261 125517 . + 0 ID=cds-WP_012775475.1;Parent=gene-LIO31_RS00795;Dbxref=Genbank:WP_012775475.1;Name=WP_012775475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936539.1;locus_tag=LIO31_RS00795;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_012775475.1;transl_table=11 NZ_CP085086.1 RefSeq gene 125562 126623 . - . ID=gene-LIO31_RS00800;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=LIO31_RS00800 NZ_CP085086.1 Protein Homology CDS 125562 126623 . - 0 ID=cds-WP_012775476.1;Parent=gene-LIO31_RS00800;Dbxref=Genbank:WP_012775476.1;Name=WP_012775476.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936538.1;locus_tag=LIO31_RS00800;product=glutamyl aminopeptidase;protein_id=WP_012775476.1;transl_table=11 NZ_CP085086.1 RefSeq gene 127316 127600 . + . ID=gene-LIO31_RS00805;Name=LIO31_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00805 NZ_CP085086.1 Protein Homology CDS 127316 127600 . + 0 ID=cds-WP_012774909.1;Parent=gene-LIO31_RS00805;Dbxref=Genbank:WP_012774909.1;Name=WP_012774909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637323.1;locus_tag=LIO31_RS00805;product=DUF4651 domain-containing protein;protein_id=WP_012774909.1;transl_table=11 NZ_CP085086.1 RefSeq gene 127597 127917 . + . ID=gene-LIO31_RS00810;Name=LIO31_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00810 NZ_CP085086.1 Protein Homology CDS 127597 127917 . + 0 ID=cds-WP_011921732.1;Parent=gene-LIO31_RS00810;Dbxref=Genbank:WP_011921732.1;Name=WP_011921732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646300.1;locus_tag=LIO31_RS00810;product=thioredoxin family protein;protein_id=WP_011921732.1;transl_table=11 NZ_CP085086.1 RefSeq gene 127962 128909 . + . ID=gene-LIO31_RS00815;Name=LIO31_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00815 NZ_CP085086.1 Protein Homology CDS 127962 128909 . + 0 ID=cds-WP_074389610.1;Parent=gene-LIO31_RS00815;Dbxref=Genbank:WP_074389610.1;Name=WP_074389610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637325.1;locus_tag=LIO31_RS00815;product=DUF1002 domain-containing protein;protein_id=WP_074389610.1;transl_table=11 NZ_CP085086.1 RefSeq gene 128928 129551 . + . ID=gene-LIO31_RS00820;Name=LIO31_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00820 NZ_CP085086.1 Protein Homology CDS 128928 129551 . + 0 ID=cds-WP_024406063.1;Parent=gene-LIO31_RS00820;Dbxref=Genbank:WP_024406063.1;Name=WP_024406063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011284429.1;locus_tag=LIO31_RS00820;product=DUF4479 and tRNA-binding domain-containing protein;protein_id=WP_024406063.1;transl_table=11 NZ_CP085086.1 RefSeq gene 129584 130363 . - . ID=gene-LIO31_RS00825;Name=LIO31_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00825 NZ_CP085086.1 Protein Homology CDS 129584 130363 . - 0 ID=cds-WP_011922565.1;Parent=gene-LIO31_RS00825;Dbxref=Genbank:WP_011922565.1;Name=WP_011922565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637327.1;locus_tag=LIO31_RS00825;product=DUF2785 domain-containing protein;protein_id=WP_011922565.1;transl_table=11 NZ_CP085086.1 RefSeq gene 130418 130813 . + . ID=gene-LIO31_RS00830;Name=LIO31_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00830 NZ_CP085086.1 Protein Homology CDS 130418 130813 . + 0 ID=cds-WP_011921737.1;Parent=gene-LIO31_RS00830;Dbxref=Genbank:WP_011921737.1;Name=WP_011921737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282448.1;locus_tag=LIO31_RS00830;product=single-stranded DNA-binding protein;protein_id=WP_011921737.1;transl_table=11 NZ_CP085086.1 RefSeq gene 130932 131177 . - . ID=gene-LIO31_RS00835;Name=LIO31_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00835 NZ_CP085086.1 Protein Homology CDS 130932 131177 . - 0 ID=cds-WP_014917177.1;Parent=gene-LIO31_RS00835;Dbxref=Genbank:WP_014917177.1;Name=WP_014917177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936522.1;locus_tag=LIO31_RS00835;product=hypothetical protein;protein_id=WP_014917177.1;transl_table=11 NZ_CP085086.1 RefSeq gene 131375 131656 . + . ID=gene-LIO31_RS00840;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LIO31_RS00840 NZ_CP085086.1 Protein Homology CDS 131375 131656 . + 0 ID=cds-WP_012774911.1;Parent=gene-LIO31_RS00840;Dbxref=Genbank:WP_012774911.1;Name=WP_012774911.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735304.1;locus_tag=LIO31_RS00840;product=co-chaperone GroES;protein_id=WP_012774911.1;transl_table=11 NZ_CP085086.1 RefSeq gene 131667 133289 . + . ID=gene-LIO31_RS00845;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LIO31_RS00845 NZ_CP085086.1 Protein Homology CDS 131667 133289 . + 0 ID=cds-WP_012774912.1;Parent=gene-LIO31_RS00845;Dbxref=Genbank:WP_012774912.1;Name=WP_012774912.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940029.1;locus_tag=LIO31_RS00845;product=chaperonin GroEL;protein_id=WP_012774912.1;transl_table=11 NZ_CP085086.1 RefSeq gene 133521 133934 . + . ID=gene-LIO31_RS00850;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LIO31_RS00850 NZ_CP085086.1 Protein Homology CDS 133521 133934 . + 0 ID=cds-WP_002940030.1;Parent=gene-LIO31_RS00850;Dbxref=Genbank:WP_002940030.1;Name=WP_002940030.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142328.1;locus_tag=LIO31_RS00850;product=30S ribosomal protein S12;protein_id=WP_002940030.1;transl_table=11 NZ_CP085086.1 RefSeq gene 133951 134421 . + . ID=gene-LIO31_RS00855;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LIO31_RS00855 NZ_CP085086.1 Protein Homology CDS 133951 134421 . + 0 ID=cds-WP_002940031.1;Parent=gene-LIO31_RS00855;Dbxref=Genbank:WP_002940031.1;Name=WP_002940031.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=LIO31_RS00855;product=30S ribosomal protein S7;protein_id=WP_002940031.1;transl_table=11 NZ_CP085086.1 RefSeq gene 134978 137059 . + . ID=gene-LIO31_RS00860;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LIO31_RS00860 NZ_CP085086.1 Protein Homology CDS 134978 137059 . + 0 ID=cds-WP_074389611.1;Parent=gene-LIO31_RS00860;Dbxref=Genbank:WP_074389611.1;Name=WP_074389611.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374688.1;locus_tag=LIO31_RS00860;product=elongation factor G;protein_id=WP_074389611.1;transl_table=11 NZ_CP085086.1 RefSeq gene 138048 140039 . + . ID=gene-LIO31_RS00865;Name=LIO31_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00865 NZ_CP085086.1 Protein Homology CDS 138048 140039 . + 0 ID=cds-WP_012775478.1;Parent=gene-LIO31_RS00865;Dbxref=Genbank:WP_012775478.1;Name=WP_012775478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917178.1;locus_tag=LIO31_RS00865;product=M13 family metallopeptidase;protein_id=WP_012775478.1;transl_table=11 NZ_CP085086.1 RefSeq gene 140406 141416 . + . ID=gene-LIO31_RS00870;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LIO31_RS00870 NZ_CP085086.1 Protein Homology CDS 140406 141416 . + 0 ID=cds-WP_012775479.1;Parent=gene-LIO31_RS00870;Dbxref=Genbank:WP_012775479.1;Name=WP_012775479.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090210.1;locus_tag=LIO31_RS00870;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_012775479.1;transl_table=11 NZ_CP085086.1 RefSeq gene 141672 142871 . + . ID=gene-LIO31_RS00875;Name=LIO31_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00875 NZ_CP085086.1 Protein Homology CDS 141672 142871 . + 0 ID=cds-WP_074389612.1;Parent=gene-LIO31_RS00875;Dbxref=Genbank:WP_074389612.1;Name=WP_074389612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=LIO31_RS00875;product=phosphoglycerate kinase;protein_id=WP_074389612.1;transl_table=11 NZ_CP085086.1 RefSeq gene 143678 144193 . + . ID=gene-LIO31_RS00880;Name=LIO31_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00880 NZ_CP085086.1 Protein Homology CDS 143678 144193 . + 0 ID=cds-WP_011921749.1;Parent=gene-LIO31_RS00880;Dbxref=Genbank:WP_011921749.1;Name=WP_011921749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637338.1;locus_tag=LIO31_RS00880;product=aromatic acid exporter family protein;protein_id=WP_011921749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 144269 144640 . + . ID=gene-LIO31_RS00885;Name=LIO31_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00885 NZ_CP085086.1 Protein Homology CDS 144269 144640 . + 0 ID=cds-WP_002940041.1;Parent=gene-LIO31_RS00885;Dbxref=Genbank:WP_002940041.1;Name=WP_002940041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940041.1;locus_tag=LIO31_RS00885;product=MerR family transcriptional regulator;protein_id=WP_002940041.1;transl_table=11 NZ_CP085086.1 RefSeq gene 144669 146015 . + . ID=gene-LIO31_RS00890;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LIO31_RS00890 NZ_CP085086.1 Protein Homology CDS 144669 146015 . + 0 ID=cds-WP_011921751.1;Parent=gene-LIO31_RS00890;Dbxref=Genbank:WP_011921751.1;Name=WP_011921751.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808235.1;locus_tag=LIO31_RS00890;product=type I glutamate--ammonia ligase;protein_id=WP_011921751.1;transl_table=11 NZ_CP085086.1 RefSeq gene 146238 147917 . - . ID=gene-LIO31_RS00895;Name=LIO31_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00895 NZ_CP085086.1 Protein Homology CDS 146238 147917 . - 0 ID=cds-WP_002938522.1;Parent=gene-LIO31_RS00895;Dbxref=Genbank:WP_002938522.1;Name=WP_002938522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735312.1;locus_tag=LIO31_RS00895;product=ribonuclease J;protein_id=WP_002938522.1;transl_table=11 NZ_CP085086.1 RefSeq gene 147921 148151 . - . ID=gene-LIO31_RS00900;Name=LIO31_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00900 NZ_CP085086.1 Protein Homology CDS 147921 148151 . - 0 ID=cds-WP_002938523.1;Parent=gene-LIO31_RS00900;Dbxref=Genbank:WP_002938523.1;Name=WP_002938523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639444.1;locus_tag=LIO31_RS00900;product=DNA-directed RNA polymerase subunit epsilon;protein_id=WP_002938523.1;transl_table=11 NZ_CP085086.1 RefSeq gene 148598 149281 . + . ID=gene-LIO31_RS00905;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LIO31_RS00905 NZ_CP085086.1 Protein Homology CDS 148598 149281 . + 0 ID=cds-WP_024405864.1;Parent=gene-LIO31_RS00905;Dbxref=Genbank:WP_024405864.1;Name=WP_024405864.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940067.1;locus_tag=LIO31_RS00905;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_024405864.1;transl_table=11 NZ_CP085086.1 RefSeq gene 149278 149718 . + . ID=gene-LIO31_RS00910;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LIO31_RS00910 NZ_CP085086.1 Protein Homology CDS 149278 149718 . + 0 ID=cds-WP_024405865.1;Parent=gene-LIO31_RS00910;Dbxref=Genbank:WP_024405865.1;Name=WP_024405865.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940070.1;locus_tag=LIO31_RS00910;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_024405865.1;transl_table=11 NZ_CP085086.1 RefSeq gene 149708 150715 . + . ID=gene-LIO31_RS00915;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LIO31_RS00915 NZ_CP085086.1 Protein Homology CDS 149708 150715 . + 0 ID=cds-WP_024405866.1;Parent=gene-LIO31_RS00915;Dbxref=Genbank:WP_024405866.1;Name=WP_024405866.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940071.1;locus_tag=LIO31_RS00915;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_024405866.1;transl_table=11 NZ_CP085086.1 RefSeq gene 151041 152333 . - . ID=gene-LIO31_RS00920;Name=LIO31_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00920 NZ_CP085086.1 Protein Homology CDS 151041 152333 . - 0 ID=cds-WP_171840749.1;Parent=gene-LIO31_RS00920;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS00920;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 152516 153352 . - . ID=gene-LIO31_RS00925;Name=LIO31_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00925 NZ_CP085086.1 Protein Homology CDS 152516 153352 . - 0 ID=cds-WP_024386370.1;Parent=gene-LIO31_RS00925;Dbxref=Genbank:WP_024386370.1;Name=WP_024386370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735318.1;locus_tag=LIO31_RS00925;product=AraC family transcriptional regulator;protein_id=WP_024386370.1;transl_table=11 NZ_CP085086.1 RefSeq gene 153567 154841 . + . ID=gene-LIO31_RS00930;Name=LIO31_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00930 NZ_CP085086.1 Protein Homology CDS 153567 154841 . + 0 ID=cds-WP_002939306.1;Parent=gene-LIO31_RS00930;Dbxref=Genbank:WP_002939306.1;Name=WP_002939306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939306.1;locus_tag=LIO31_RS00930;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002939306.1;transl_table=11 NZ_CP085086.1 RefSeq gene 154910 155803 . + . ID=gene-LIO31_RS00935;Name=LIO31_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00935 NZ_CP085086.1 Protein Homology CDS 154910 155803 . + 0 ID=cds-WP_002939305.1;Parent=gene-LIO31_RS00935;Dbxref=Genbank:WP_002939305.1;Name=WP_002939305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939305.1;locus_tag=LIO31_RS00935;product=sugar ABC transporter permease;protein_id=WP_002939305.1;transl_table=11 NZ_CP085086.1 RefSeq gene 155814 156644 . + . ID=gene-LIO31_RS00940;Name=LIO31_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00940 NZ_CP085086.1 Protein Homology CDS 155814 156644 . + 0 ID=cds-WP_011921761.1;Parent=gene-LIO31_RS00940;Dbxref=Genbank:WP_011921761.1;Name=WP_011921761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939293.1;locus_tag=LIO31_RS00940;product=carbohydrate ABC transporter permease;protein_id=WP_011921761.1;transl_table=11 NZ_CP085086.1 RefSeq gene 156654 158855 . + . ID=gene-LIO31_RS00945;Name=LIO31_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00945 NZ_CP085086.1 Protein Homology CDS 156654 158855 . + 0 ID=cds-WP_074389704.1;Parent=gene-LIO31_RS00945;Dbxref=Genbank:WP_074389704.1;Name=WP_074389704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939291.1;locus_tag=LIO31_RS00945;product=alpha-galactosidase;protein_id=WP_074389704.1;transl_table=11 NZ_CP085086.1 RefSeq gene 159130 159831 . + . ID=gene-LIO31_RS00950;Name=LIO31_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00950 NZ_CP085086.1 Protein Homology CDS 159130 159831 . + 0 ID=cds-WP_013730086.1;Parent=gene-LIO31_RS00950;Dbxref=Genbank:WP_013730086.1;Name=WP_013730086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735324.1;locus_tag=LIO31_RS00950;product=AzlC family ABC transporter permease;protein_id=WP_013730086.1;transl_table=11 NZ_CP085086.1 RefSeq gene 159818 160141 . + . ID=gene-LIO31_RS00955;Name=LIO31_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00955 NZ_CP085086.1 Protein Homology CDS 159818 160141 . + 0 ID=cds-WP_012774916.1;Parent=gene-LIO31_RS00955;Dbxref=Genbank:WP_012774916.1;Name=WP_012774916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774916.1;locus_tag=LIO31_RS00955;product=AzlD domain-containing protein;protein_id=WP_012774916.1;transl_table=11 NZ_CP085086.1 RefSeq gene 160151 161173 . + . ID=gene-LIO31_RS00960;Name=LIO31_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00960 NZ_CP085086.1 Protein Homology CDS 160151 161173 . + 0 ID=cds-WP_024406024.1;Parent=gene-LIO31_RS00960;Dbxref=Genbank:WP_024406024.1;Name=WP_024406024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646319.1;locus_tag=LIO31_RS00960;product=YeiH family protein;protein_id=WP_024406024.1;transl_table=11 NZ_CP085086.1 RefSeq gene 161635 164799 . + . ID=gene-LIO31_RS00965;Name=LIO31_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00965 NZ_CP085086.1 Protein Homology CDS 161635 164799 . + 0 ID=cds-WP_079848202.1;Parent=gene-LIO31_RS00965;Dbxref=Genbank:WP_079848202.1;Name=WP_079848202.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LIO31_RS00965;product=DUF1542 domain-containing protein;protein_id=WP_079848202.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 164841 165269 . + . ID=gene-LIO31_RS10305;Name=LIO31_RS10305;end_range=165269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS10305;partial=true;pseudo=true;start_range=.,164841 NZ_CP085086.1 Protein Homology CDS 164841 165269 . + 0 ID=cds-LIO31_RS10305;Parent=gene-LIO31_RS10305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=165269,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LIO31_RS10305;partial=true;product=DUF1542 domain-containing protein;pseudo=true;start_range=.,164841;transl_table=11 NZ_CP085086.1 RefSeq gene 165381 166118 . + . ID=gene-LIO31_RS10310;Name=LIO31_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10310 NZ_CP085086.1 Protein Homology CDS 165381 166118 . + 0 ID=cds-WP_079845833.1;Parent=gene-LIO31_RS10310;Dbxref=Genbank:WP_079845833.1;Name=WP_079845833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LIO31_RS10310;product=DUF1542 domain-containing protein;protein_id=WP_079845833.1;transl_table=11 NZ_CP085086.1 RefSeq gene 166103 168421 . + . ID=gene-LIO31_RS00975;Name=LIO31_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00975 NZ_CP085086.1 Protein Homology CDS 166103 168421 . + 0 ID=cds-WP_226960419.1;Parent=gene-LIO31_RS00975;Dbxref=Genbank:WP_226960419.1;Name=WP_226960419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=LIO31_RS00975;product=DUF1542 domain-containing protein;protein_id=WP_226960419.1;transl_table=11 NZ_CP085086.1 RefSeq gene 168641 170263 . - . ID=gene-LIO31_RS00980;Name=LIO31_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00980 NZ_CP085086.1 Protein Homology CDS 168641 170263 . - 0 ID=cds-WP_074389705.1;Parent=gene-LIO31_RS00980;Dbxref=Genbank:WP_074389705.1;Name=WP_074389705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921770.1;locus_tag=LIO31_RS00980;product=hypothetical protein;protein_id=WP_074389705.1;transl_table=11 NZ_CP085086.1 RefSeq gene 170273 170971 . - . ID=gene-LIO31_RS00985;Name=LIO31_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00985 NZ_CP085086.1 Protein Homology CDS 170273 170971 . - 0 ID=cds-WP_012774917.1;Parent=gene-LIO31_RS00985;Dbxref=Genbank:WP_012774917.1;Name=WP_012774917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637352.1;locus_tag=LIO31_RS00985;product=ABC transporter ATP-binding protein;protein_id=WP_012774917.1;transl_table=11 NZ_CP085086.1 RefSeq gene 171272 172447 . - . ID=gene-LIO31_RS00990;Name=LIO31_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00990 NZ_CP085086.1 Protein Homology CDS 171272 172447 . - 0 ID=cds-WP_024405637.1;Parent=gene-LIO31_RS00990;Dbxref=Genbank:WP_024405637.1;Name=WP_024405637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921772.1;locus_tag=LIO31_RS00990;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_024405637.1;transl_table=11 NZ_CP085086.1 RefSeq gene 172685 174085 . + . ID=gene-LIO31_RS00995;Name=LIO31_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS00995 NZ_CP085086.1 Protein Homology CDS 172685 174085 . + 0 ID=cds-WP_024405636.1;Parent=gene-LIO31_RS00995;Dbxref=Genbank:WP_024405636.1;Name=WP_024405636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636759.1;locus_tag=LIO31_RS00995;product=glycoside hydrolase family 1 protein;protein_id=WP_024405636.1;transl_table=11 NZ_CP085086.1 RefSeq gene 174255 174749 . + . ID=gene-LIO31_RS01000;Name=LIO31_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01000 NZ_CP085086.1 Protein Homology CDS 174255 174749 . + 0 ID=cds-WP_012774919.1;Parent=gene-LIO31_RS01000;Dbxref=Genbank:WP_012774919.1;Name=WP_012774919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774919.1;locus_tag=LIO31_RS01000;product=DUF536 domain-containing protein;protein_id=WP_012774919.1;transl_table=11 NZ_CP085086.1 RefSeq gene 175070 177112 . + . ID=gene-LIO31_RS01005;Name=LIO31_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01005 NZ_CP085086.1 Protein Homology CDS 175070 177112 . + 0 ID=cds-WP_024405635.1;Parent=gene-LIO31_RS01005;Dbxref=Genbank:WP_024405635.1;Name=WP_024405635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935999.1;locus_tag=LIO31_RS01005;product=BglG family transcription antiterminator;protein_id=WP_024405635.1;transl_table=11 NZ_CP085086.1 RefSeq gene 177114 177398 . + . ID=gene-LIO31_RS01010;Name=LIO31_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01010 NZ_CP085086.1 Protein Homology CDS 177114 177398 . + 0 ID=cds-WP_002935998.1;Parent=gene-LIO31_RS01010;Dbxref=Genbank:WP_002935998.1;Name=WP_002935998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397350.1;locus_tag=LIO31_RS01010;product=PTS sugar transporter subunit IIB;protein_id=WP_002935998.1;transl_table=11 NZ_CP085086.1 RefSeq gene 177452 178798 . + . ID=gene-LIO31_RS01015;Name=LIO31_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01015 NZ_CP085086.1 Protein Homology CDS 177452 178798 . + 0 ID=cds-WP_011921778.1;Parent=gene-LIO31_RS01015;Dbxref=Genbank:WP_011921778.1;Name=WP_011921778.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735333.1;locus_tag=LIO31_RS01015;product=PTS ascorbate transporter subunit IIC;protein_id=WP_011921778.1;transl_table=11 NZ_CP085086.1 RefSeq gene 178800 179648 . + . ID=gene-LIO31_RS01020;Name=LIO31_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01020 NZ_CP085086.1 Protein Homology CDS 178800 179648 . + 0 ID=cds-WP_002935995.1;Parent=gene-LIO31_RS01020;Dbxref=Genbank:WP_002935995.1;Name=WP_002935995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735334.1;locus_tag=LIO31_RS01020;product=transketolase;protein_id=WP_002935995.1;transl_table=11 NZ_CP085086.1 RefSeq gene 179645 180571 . + . ID=gene-LIO31_RS01025;Name=LIO31_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01025 NZ_CP085086.1 Protein Homology CDS 179645 180571 . + 0 ID=cds-WP_024405634.1;Parent=gene-LIO31_RS01025;Dbxref=Genbank:WP_024405634.1;Name=WP_024405634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774920.1;locus_tag=LIO31_RS01025;product=transketolase;protein_id=WP_024405634.1;transl_table=11 NZ_CP085086.1 RefSeq gene 180762 182522 . + . ID=gene-LIO31_RS01030;Name=LIO31_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01030 NZ_CP085086.1 Protein Homology CDS 180762 182522 . + 0 ID=cds-WP_074389706.1;Parent=gene-LIO31_RS01030;Dbxref=Genbank:WP_074389706.1;Name=WP_074389706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935993.1;locus_tag=LIO31_RS01030;product=glycerophosphodiester phosphodiesterase;protein_id=WP_074389706.1;transl_table=11 NZ_CP085086.1 RefSeq gene 182561 182860 . - . ID=gene-LIO31_RS01035;Name=LIO31_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01035 NZ_CP085086.1 Protein Homology CDS 182561 182860 . - 0 ID=cds-WP_024405632.1;Parent=gene-LIO31_RS01035;Dbxref=Genbank:WP_024405632.1;Name=WP_024405632.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808250.1;locus_tag=LIO31_RS01035;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_024405632.1;transl_table=11 NZ_CP085086.1 RefSeq gene 183138 184307 . + . ID=gene-LIO31_RS01040;Name=LIO31_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01040 NZ_CP085086.1 Protein Homology CDS 183138 184307 . + 0 ID=cds-WP_024405631.1;Parent=gene-LIO31_RS01040;Dbxref=Genbank:WP_024405631.1;Name=WP_024405631.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735337.1;locus_tag=LIO31_RS01040;product=SIS domain-containing protein;protein_id=WP_024405631.1;transl_table=11 NZ_CP085086.1 RefSeq gene 184437 186239 . + . ID=gene-LIO31_RS01045;Name=LIO31_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01045 NZ_CP085086.1 Protein Homology CDS 184437 186239 . + 0 ID=cds-WP_074389707.1;Parent=gene-LIO31_RS01045;Dbxref=Genbank:WP_074389707.1;Name=WP_074389707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922585.1;locus_tag=LIO31_RS01045;product=G5 domain-containing protein;protein_id=WP_074389707.1;transl_table=11 NZ_CP085086.1 RefSeq gene 186516 188783 . - . ID=gene-LIO31_RS01050;Name=LIO31_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01050 NZ_CP085086.1 Protein Homology CDS 186516 188783 . - 0 ID=cds-WP_011921783.1;Parent=gene-LIO31_RS01050;Dbxref=Genbank:WP_011921783.1;Name=WP_011921783.1;Ontology_term=GO:0006508,GO:0008239;gbkey=CDS;go_function=dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941485.1;locus_tag=LIO31_RS01050;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_011921783.1;transl_table=11 NZ_CP085086.1 RefSeq gene 188965 189699 . + . ID=gene-LIO31_RS01055;Name=LIO31_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01055 NZ_CP085086.1 Protein Homology CDS 188965 189699 . + 0 ID=cds-WP_012774921.1;Parent=gene-LIO31_RS01055;Dbxref=Genbank:WP_012774921.1;Name=WP_012774921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646338.1;locus_tag=LIO31_RS01055;product=chemotaxis protein;protein_id=WP_012774921.1;transl_table=11 NZ_CP085086.1 RefSeq gene 189696 190643 . + . ID=gene-LIO31_RS01060;Name=LIO31_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01060 NZ_CP085086.1 Protein Homology CDS 189696 190643 . + 0 ID=cds-WP_024405627.1;Parent=gene-LIO31_RS01060;Dbxref=Genbank:WP_024405627.1;Name=WP_024405627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941482.1;locus_tag=LIO31_RS01060;product=serine hydrolase;protein_id=WP_024405627.1;transl_table=11 NZ_CP085086.1 RefSeq gene 191051 193396 . - . ID=gene-LIO31_RS01065;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=LIO31_RS01065 NZ_CP085086.1 Protein Homology CDS 191051 193396 . - 0 ID=cds-WP_024405455.1;Parent=gene-LIO31_RS01065;Dbxref=Genbank:WP_024405455.1;Name=WP_024405455.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941480.1;locus_tag=LIO31_RS01065;product=formate C-acetyltransferase;protein_id=WP_024405455.1;transl_table=11 NZ_CP085086.1 RefSeq gene 193711 194778 . + . ID=gene-LIO31_RS01070;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LIO31_RS01070 NZ_CP085086.1 Protein Homology CDS 193711 194778 . + 0 ID=cds-WP_024405454.1;Parent=gene-LIO31_RS01070;Dbxref=Genbank:WP_024405454.1;Name=WP_024405454.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637367.1;locus_tag=LIO31_RS01070;product=DNA polymerase IV;protein_id=WP_024405454.1;transl_table=11 NZ_CP085086.1 RefSeq gene 194821 195240 . + . ID=gene-LIO31_RS01075;Name=LIO31_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01075 NZ_CP085086.1 Protein Homology CDS 194821 195240 . + 0 ID=cds-WP_024405453.1;Parent=gene-LIO31_RS01075;Dbxref=Genbank:WP_024405453.1;Name=WP_024405453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935983.1;locus_tag=LIO31_RS01075;product=Rrf2 family transcriptional regulator;protein_id=WP_024405453.1;transl_table=11 NZ_CP085086.1 RefSeq gene 195480 196106 . + . ID=gene-LIO31_RS01080;Name=LIO31_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01080 NZ_CP085086.1 Protein Homology CDS 195480 196106 . + 0 ID=cds-WP_002935982.1;Parent=gene-LIO31_RS01080;Dbxref=Genbank:WP_002935982.1;Name=WP_002935982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646349.1;locus_tag=LIO31_RS01080;product=NAD(P)-dependent oxidoreductase;protein_id=WP_002935982.1;transl_table=11 NZ_CP085086.1 RefSeq gene 196208 197128 . + . ID=gene-LIO31_RS01085;Name=LIO31_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01085 NZ_CP085086.1 Protein Homology CDS 196208 197128 . + 0 ID=cds-WP_011922588.1;Parent=gene-LIO31_RS01085;Dbxref=Genbank:WP_011922588.1;Name=WP_011922588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922588.1;locus_tag=LIO31_RS01085;product=PfkB family carbohydrate kinase;protein_id=WP_011922588.1;transl_table=11 NZ_CP085086.1 RefSeq gene 197176 197814 . + . ID=gene-LIO31_RS01090;Name=LIO31_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01090 NZ_CP085086.1 Protein Homology CDS 197176 197814 . + 0 ID=cds-WP_014636205.1;Parent=gene-LIO31_RS01090;Dbxref=Genbank:WP_014636205.1;Name=WP_014636205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935979.1;locus_tag=LIO31_RS01090;product=DNA repair protein;protein_id=WP_014636205.1;transl_table=11 NZ_CP085086.1 RefSeq gene 198097 199296 . - . ID=gene-LIO31_RS01095;Name=LIO31_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01095 NZ_CP085086.1 Protein Homology CDS 198097 199296 . - 0 ID=cds-WP_012774923.1;Parent=gene-LIO31_RS01095;Dbxref=Genbank:WP_012774923.1;Name=WP_012774923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774923.1;locus_tag=LIO31_RS01095;product=ROK family protein;protein_id=WP_012774923.1;transl_table=11 NZ_CP085086.1 RefSeq gene 199489 200817 . + . ID=gene-LIO31_RS01100;Name=LIO31_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01100 NZ_CP085086.1 Protein Homology CDS 199489 200817 . + 0 ID=cds-WP_012774924.1;Parent=gene-LIO31_RS01100;Dbxref=Genbank:WP_012774924.1;Name=WP_012774924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774924.1;locus_tag=LIO31_RS01100;product=PTS sugar transporter subunit IIC;protein_id=WP_012774924.1;transl_table=11 NZ_CP085086.1 RefSeq gene 200822 202708 . + . ID=gene-LIO31_RS01105;Name=LIO31_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01105 NZ_CP085086.1 Protein Homology CDS 200822 202708 . + 0 ID=cds-WP_012774925.1;Parent=gene-LIO31_RS01105;Dbxref=Genbank:WP_012774925.1;Name=WP_012774925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000236922.1;locus_tag=LIO31_RS01105;product=DUF4838 domain-containing protein;protein_id=WP_012774925.1;transl_table=11 NZ_CP085086.1 RefSeq gene 202971 204935 . + . ID=gene-LIO31_RS01110;Name=LIO31_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01110 NZ_CP085086.1 GeneMarkS-2+ CDS 202971 204935 . + 0 ID=cds-WP_226960420.1;Parent=gene-LIO31_RS01110;Dbxref=Genbank:WP_226960420.1;Name=WP_226960420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS01110;product=hypothetical protein;protein_id=WP_226960420.1;transl_table=11 NZ_CP085086.1 RefSeq gene 205188 205997 . + . ID=gene-LIO31_RS01115;Name=LIO31_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01115 NZ_CP085086.1 Protein Homology CDS 205188 205997 . + 0 ID=cds-WP_023369178.1;Parent=gene-LIO31_RS01115;Dbxref=Genbank:WP_023369178.1;Name=WP_023369178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921804.1;locus_tag=LIO31_RS01115;product=6-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase;protein_id=WP_023369178.1;transl_table=11 NZ_CP085086.1 RefSeq gene 206159 206338 . + . ID=gene-LIO31_RS01120;Name=LIO31_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01120 NZ_CP085086.1 Protein Homology CDS 206159 206338 . + 0 ID=cds-WP_023369180.1;Parent=gene-LIO31_RS01120;Dbxref=Genbank:WP_023369180.1;Name=WP_023369180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014635836.1;locus_tag=LIO31_RS01120;product=heavy-metal-associated domain-containing protein;protein_id=WP_023369180.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 206802 207286 . + . ID=gene-LIO31_RS01125;Name=LIO31_RS01125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01125;pseudo=true NZ_CP085086.1 Protein Homology CDS 206802 207286 . + 0 ID=cds-LIO31_RS01125;Parent=gene-LIO31_RS01125;Note=frameshifted;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012350.2;locus_tag=LIO31_RS01125;product=HAD-IC family P-type ATPase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 207287 208249 . + . ID=gene-LIO31_RS01130;Name=LIO31_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01130 NZ_CP085086.1 Protein Homology CDS 207287 208249 . + 0 ID=cds-WP_011921806.1;Parent=gene-LIO31_RS01130;Dbxref=Genbank:WP_011921806.1;Name=WP_011921806.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921806.1;locus_tag=LIO31_RS01130;product=HAD-IC family P-type ATPase;protein_id=WP_011921806.1;transl_table=11 NZ_CP085086.1 RefSeq gene 208288 210777 . - . ID=gene-LIO31_RS01135;Name=LIO31_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01135 NZ_CP085086.1 Protein Homology CDS 208288 210777 . - 0 ID=cds-WP_024405450.1;Parent=gene-LIO31_RS01135;Dbxref=Genbank:WP_024405450.1;Name=WP_024405450.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636769.1;locus_tag=LIO31_RS01135;product=ATP-dependent RecD-like DNA helicase;protein_id=WP_024405450.1;transl_table=11 NZ_CP085086.1 RefSeq gene 211006 211635 . - . ID=gene-LIO31_RS01140;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LIO31_RS01140 NZ_CP085086.1 Protein Homology CDS 211006 211635 . - 0 ID=cds-WP_002935959.1;Parent=gene-LIO31_RS01140;Dbxref=Genbank:WP_002935959.1;Name=WP_002935959.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935959.1;locus_tag=LIO31_RS01140;product=signal peptidase I;protein_id=WP_002935959.1;transl_table=11 NZ_CP085086.1 RefSeq gene 211646 212536 . - . ID=gene-LIO31_RS01145;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=LIO31_RS01145 NZ_CP085086.1 Protein Homology CDS 211646 212536 . - 0 ID=cds-WP_024405449.1;Parent=gene-LIO31_RS01145;Dbxref=Genbank:WP_024405449.1;Name=WP_024405449.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941569.1;locus_tag=LIO31_RS01145;product=ribonuclease HIII;protein_id=WP_024405449.1;transl_table=11 NZ_CP085086.1 RefSeq gene 212621 213604 . + . ID=gene-LIO31_RS01150;Name=LIO31_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01150 NZ_CP085086.1 Protein Homology CDS 212621 213604 . + 0 ID=cds-WP_074389377.1;Parent=gene-LIO31_RS01150;Dbxref=Genbank:WP_074389377.1;Name=WP_074389377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774928.1;locus_tag=LIO31_RS01150;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_074389377.1;transl_table=11 NZ_CP085086.1 RefSeq gene 213953 215152 . + . ID=gene-LIO31_RS01155;Name=LIO31_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01155 NZ_CP085086.1 Protein Homology CDS 213953 215152 . + 0 ID=cds-WP_074389375.1;Parent=gene-LIO31_RS01155;Dbxref=Genbank:WP_074389375.1;Name=WP_074389375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922597.1;locus_tag=LIO31_RS01155;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_074389375.1;transl_table=11 NZ_CP085086.1 RefSeq gene 215825 217450 . - . ID=gene-LIO31_RS01160;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=LIO31_RS01160 NZ_CP085086.1 Protein Homology CDS 215825 217450 . - 0 ID=cds-WP_074389709.1;Parent=gene-LIO31_RS01160;Dbxref=Genbank:WP_074389709.1;Name=WP_074389709.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909185.1;locus_tag=LIO31_RS01160;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_074389709.1;transl_table=11 NZ_CP085086.1 RefSeq gene 217531 219525 . - . ID=gene-LIO31_RS01165;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=LIO31_RS01165 NZ_CP085086.1 Protein Homology CDS 217531 219525 . - 0 ID=cds-WP_074389710.1;Parent=gene-LIO31_RS01165;Dbxref=Genbank:WP_074389710.1;Name=WP_074389710.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636547.1;locus_tag=LIO31_RS01165;product=PTS system trehalose-specific EIIBC component;protein_id=WP_074389710.1;transl_table=11 NZ_CP085086.1 RefSeq gene 219758 220471 . + . ID=gene-LIO31_RS01170;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=LIO31_RS01170 NZ_CP085086.1 Protein Homology CDS 219758 220471 . + 0 ID=cds-WP_024393394.1;Parent=gene-LIO31_RS01170;Dbxref=Genbank:WP_024393394.1;Name=WP_024393394.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774930.1;locus_tag=LIO31_RS01170;product=trehalose operon repressor;protein_id=WP_024393394.1;transl_table=11 NZ_CP085086.1 RefSeq gene 220529 220840 . + . ID=gene-LIO31_RS01175;Name=LIO31_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01175 NZ_CP085086.1 Protein Homology CDS 220529 220840 . + 0 ID=cds-WP_002935948.1;Parent=gene-LIO31_RS01175;Dbxref=Genbank:WP_002935948.1;Name=WP_002935948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935948.1;locus_tag=LIO31_RS01175;product=hypothetical protein;protein_id=WP_002935948.1;transl_table=11 NZ_CP085086.1 RefSeq gene 220837 221385 . + . ID=gene-LIO31_RS01180;Name=LIO31_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01180 NZ_CP085086.1 Protein Homology CDS 220837 221385 . + 0 ID=cds-WP_002935945.1;Parent=gene-LIO31_RS01180;Dbxref=Genbank:WP_002935945.1;Name=WP_002935945.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935945.1;locus_tag=LIO31_RS01180;product=CvpA family protein;protein_id=WP_002935945.1;transl_table=11 NZ_CP085086.1 RefSeq gene 221880 224213 . + . ID=gene-LIO31_RS01185;Name=LIO31_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01185 NZ_CP085086.1 Protein Homology CDS 221880 224213 . + 0 ID=cds-WP_024405878.1;Parent=gene-LIO31_RS01185;Dbxref=Genbank:WP_024405878.1;Name=WP_024405878.1;Ontology_term=GO:0006259,GO:0030983;gbkey=CDS;go_function=mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659728.1;locus_tag=LIO31_RS01185;product=endonuclease MutS2;protein_id=WP_024405878.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 224237 224949 . + . ID=gene-LIO31_RS01190;Name=LIO31_RS01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01190;pseudo=true NZ_CP085086.1 Protein Homology CDS 224237 224949 . + 0 ID=cds-LIO31_RS01190;Parent=gene-LIO31_RS01190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921818.1;locus_tag=LIO31_RS01190;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 225314 225628 . + . ID=gene-LIO31_RS01195;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LIO31_RS01195 NZ_CP085086.1 Protein Homology CDS 225314 225628 . + 0 ID=cds-WP_024386049.1;Parent=gene-LIO31_RS01195;Dbxref=Genbank:WP_024386049.1;Name=WP_024386049.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941035.1;locus_tag=LIO31_RS01195;product=thioredoxin;protein_id=WP_024386049.1;transl_table=11 NZ_CP085086.1 RefSeq gene 225768 227297 . + . ID=gene-LIO31_RS01200;Name=LIO31_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01200 NZ_CP085086.1 Protein Homology CDS 225768 227297 . + 0 ID=cds-WP_074389711.1;Parent=gene-LIO31_RS01200;Dbxref=Genbank:WP_074389711.1;Name=WP_074389711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735361.1;locus_tag=LIO31_RS01200;product=AMP-binding protein;protein_id=WP_074389711.1;transl_table=11 NZ_CP085086.1 RefSeq gene 227337 228275 . + . ID=gene-LIO31_RS01205;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LIO31_RS01205 NZ_CP085086.1 Protein Homology CDS 227337 228275 . + 0 ID=cds-WP_074389391.1;Parent=gene-LIO31_RS01205;Dbxref=Genbank:WP_074389391.1;Name=WP_074389391.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941039.1;locus_tag=LIO31_RS01205;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_074389391.1;transl_table=11 NZ_CP085086.1 RefSeq gene 228406 229038 . + . ID=gene-LIO31_RS01210;Name=LIO31_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01210 NZ_CP085086.1 Protein Homology CDS 228406 229038 . + 0 ID=cds-WP_226960918.1;Parent=gene-LIO31_RS01210;Dbxref=Genbank:WP_226960918.1;Name=WP_226960918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LIO31_RS01210;product=helix-turn-helix domain-containing protein;protein_id=WP_226960918.1;transl_table=11 NZ_CP085086.1 RefSeq gene 229425 230753 . + . ID=gene-LIO31_RS01215;Name=LIO31_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01215 NZ_CP085086.1 Protein Homology CDS 229425 230753 . + 0 ID=cds-WP_074389712.1;Parent=gene-LIO31_RS01215;Dbxref=Genbank:WP_074389712.1;Name=WP_074389712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774933.1;locus_tag=LIO31_RS01215;product=DUF1430 domain-containing protein;protein_id=WP_074389712.1;transl_table=11 NZ_CP085086.1 RefSeq gene 230773 232758 . + . ID=gene-LIO31_RS01220;Name=LIO31_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01220 NZ_CP085086.1 Protein Homology CDS 230773 232758 . + 0 ID=cds-WP_012774934.1;Parent=gene-LIO31_RS01220;Dbxref=Genbank:WP_012774934.1;Name=WP_012774934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774934.1;locus_tag=LIO31_RS01220;product=DUF1430 domain-containing protein;protein_id=WP_012774934.1;transl_table=11 NZ_CP085086.1 RefSeq gene 232760 233392 . + . ID=gene-LIO31_RS01225;Name=LIO31_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01225 NZ_CP085086.1 Protein Homology CDS 232760 233392 . + 0 ID=cds-WP_074389390.1;Parent=gene-LIO31_RS01225;Dbxref=Genbank:WP_074389390.1;Name=WP_074389390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941042.1;locus_tag=LIO31_RS01225;product=ABC transporter ATP-binding protein;protein_id=WP_074389390.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 233605 233709 . + . ID=id-NZ_CP085086.1:233605..233709;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 233816 235150 . + . ID=gene-LIO31_RS01230;Name=LIO31_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01230 NZ_CP085086.1 Protein Homology CDS 233816 235150 . + 0 ID=cds-WP_024402914.1;Parent=gene-LIO31_RS01230;Dbxref=Genbank:WP_024402914.1;Name=WP_024402914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909199.1;locus_tag=LIO31_RS01230;product=sodium:alanine symporter family protein;protein_id=WP_024402914.1;transl_table=11 NZ_CP085086.1 RefSeq gene 235215 236063 . + . ID=gene-LIO31_RS01235;Name=LIO31_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01235 NZ_CP085086.1 Protein Homology CDS 235215 236063 . + 0 ID=cds-WP_002937530.1;Parent=gene-LIO31_RS01235;Dbxref=Genbank:WP_002937530.1;Name=WP_002937530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646369.1;locus_tag=LIO31_RS01235;product=mechanosensitive ion channel family protein;protein_id=WP_002937530.1;transl_table=11 NZ_CP085086.1 RefSeq gene 236074 236661 . + . ID=gene-LIO31_RS01240;Name=LIO31_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01240 NZ_CP085086.1 Protein Homology CDS 236074 236661 . + 0 ID=cds-WP_014635842.1;Parent=gene-LIO31_RS01240;Dbxref=Genbank:WP_014635842.1;Name=WP_014635842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646370.1;locus_tag=LIO31_RS01240;product=DUF4352 domain-containing protein;protein_id=WP_014635842.1;transl_table=11 NZ_CP085086.1 RefSeq gene 236897 238243 . - . ID=gene-LIO31_RS01245;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=LIO31_RS01245 NZ_CP085086.1 Protein Homology CDS 236897 238243 . - 0 ID=cds-WP_024405873.1;Parent=gene-LIO31_RS01245;Dbxref=Genbank:WP_024405873.1;Name=WP_024405873.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999806.1;locus_tag=LIO31_RS01245;product=NADP-specific glutamate dehydrogenase;protein_id=WP_024405873.1;transl_table=11 NZ_CP085086.1 RefSeq gene 238466 239404 . + . ID=gene-LIO31_RS01250;Name=LIO31_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01250 NZ_CP085086.1 Protein Homology CDS 238466 239404 . + 0 ID=cds-WP_024402916.1;Parent=gene-LIO31_RS01250;Dbxref=Genbank:WP_024402916.1;Name=WP_024402916.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999807.1;locus_tag=LIO31_RS01250;product=dihydroorotate oxidase;protein_id=WP_024402916.1;transl_table=11 NZ_CP085086.1 RefSeq gene 239729 240961 . + . ID=gene-LIO31_RS01255;Name=LIO31_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01255 NZ_CP085086.1 Protein Homology CDS 239729 240961 . + 0 ID=cds-WP_024405872.1;Parent=gene-LIO31_RS01255;Dbxref=Genbank:WP_024405872.1;Name=WP_024405872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775487.1;locus_tag=LIO31_RS01255;product=CapA family protein;protein_id=WP_024405872.1;transl_table=11 NZ_CP085086.1 RefSeq gene 240973 241800 . + . ID=gene-LIO31_RS01260;Name=LIO31_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01260 NZ_CP085086.1 Protein Homology CDS 240973 241800 . + 0 ID=cds-WP_024405871.1;Parent=gene-LIO31_RS01260;Dbxref=Genbank:WP_024405871.1;Name=WP_024405871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774938.1;locus_tag=LIO31_RS01260;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_024405871.1;transl_table=11 NZ_CP085086.1 RefSeq gene 241852 242634 . - . ID=gene-LIO31_RS01265;Name=LIO31_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01265 NZ_CP085086.1 Protein Homology CDS 241852 242634 . - 0 ID=cds-WP_074389713.1;Parent=gene-LIO31_RS01265;Dbxref=Genbank:WP_074389713.1;Name=WP_074389713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937541.1;locus_tag=LIO31_RS01265;product=ABC-2 family transporter protein;protein_id=WP_074389713.1;transl_table=11 NZ_CP085086.1 RefSeq gene 242636 243415 . - . ID=gene-LIO31_RS01270;Name=LIO31_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01270 NZ_CP085086.1 Protein Homology CDS 242636 243415 . - 0 ID=cds-WP_024405870.1;Parent=gene-LIO31_RS01270;Dbxref=Genbank:WP_024405870.1;Name=WP_024405870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941063.1;locus_tag=LIO31_RS01270;product=ABC-2 family transporter protein;protein_id=WP_024405870.1;transl_table=11 NZ_CP085086.1 RefSeq gene 243408 244391 . - . ID=gene-LIO31_RS01275;Name=LIO31_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01275 NZ_CP085086.1 Protein Homology CDS 243408 244391 . - 0 ID=cds-WP_024384048.1;Parent=gene-LIO31_RS01275;Dbxref=Genbank:WP_024384048.1;Name=WP_024384048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941065.1;locus_tag=LIO31_RS01275;product=ATP-binding cassette domain-containing protein;protein_id=WP_024384048.1;transl_table=11 NZ_CP085086.1 RefSeq gene 244476 245009 . - . ID=gene-LIO31_RS01280;Name=LIO31_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01280 NZ_CP085086.1 Protein Homology CDS 244476 245009 . - 0 ID=cds-WP_015646379.1;Parent=gene-LIO31_RS01280;Dbxref=Genbank:WP_015646379.1;Name=WP_015646379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922608.1;locus_tag=LIO31_RS01280;product=TetR/AcrR family transcriptional regulator;protein_id=WP_015646379.1;transl_table=11 NZ_CP085086.1 RefSeq gene 245135 247594 . + . ID=gene-LIO31_RS01285;Name=LIO31_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01285 NZ_CP085086.1 Protein Homology CDS 245135 247594 . + 0 ID=cds-WP_074389714.1;Parent=gene-LIO31_RS01285;Dbxref=Genbank:WP_074389714.1;Name=WP_074389714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774941.1;locus_tag=LIO31_RS01285;product=YhgE/Pip domain-containing protein;protein_id=WP_074389714.1;transl_table=11 NZ_CP085086.1 RefSeq gene 247646 248704 . - . ID=gene-LIO31_RS01290;Name=LIO31_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01290 NZ_CP085086.1 Protein Homology CDS 247646 248704 . - 0 ID=cds-WP_074389715.1;Parent=gene-LIO31_RS01290;Dbxref=Genbank:WP_074389715.1;Name=WP_074389715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937548.1;locus_tag=LIO31_RS01290;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_074389715.1;transl_table=11 NZ_CP085086.1 RefSeq gene 248701 249456 . - . ID=gene-LIO31_RS01295;Name=LIO31_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01295 NZ_CP085086.1 Protein Homology CDS 248701 249456 . - 0 ID=cds-WP_023369232.1;Parent=gene-LIO31_RS01295;Dbxref=Genbank:WP_023369232.1;Name=WP_023369232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646382.1;locus_tag=LIO31_RS01295;product=DUF1700 domain-containing protein;protein_id=WP_023369232.1;transl_table=11 NZ_CP085086.1 RefSeq gene 249443 249769 . - . ID=gene-LIO31_RS01300;Name=LIO31_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01300 NZ_CP085086.1 Protein Homology CDS 249443 249769 . - 0 ID=cds-WP_002937550.1;Parent=gene-LIO31_RS01300;Dbxref=Genbank:WP_002937550.1;Name=WP_002937550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273865.1;locus_tag=LIO31_RS01300;product=PadR family transcriptional regulator;protein_id=WP_002937550.1;transl_table=11 NZ_CP085086.1 RefSeq gene 250078 250458 . + . ID=gene-LIO31_RS01305;Name=LIO31_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01305 NZ_CP085086.1 Protein Homology CDS 250078 250458 . + 0 ID=cds-WP_009909229.1;Parent=gene-LIO31_RS01305;Dbxref=Genbank:WP_009909229.1;Name=WP_009909229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921846.1;locus_tag=LIO31_RS01305;product=CidA/LrgA family protein;protein_id=WP_009909229.1;transl_table=11 NZ_CP085086.1 RefSeq gene 250451 251146 . + . ID=gene-LIO31_RS01310;Name=LIO31_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01310 NZ_CP085086.1 Protein Homology CDS 250451 251146 . + 0 ID=cds-WP_074389716.1;Parent=gene-LIO31_RS01310;Dbxref=Genbank:WP_074389716.1;Name=WP_074389716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262574.1;locus_tag=LIO31_RS01310;product=LrgB family protein;protein_id=WP_074389716.1;transl_table=11 NZ_CP085086.1 RefSeq gene 251180 251980 . - . ID=gene-LIO31_RS01315;Name=LIO31_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01315 NZ_CP085086.1 Protein Homology CDS 251180 251980 . - 0 ID=cds-WP_023369238.1;Parent=gene-LIO31_RS01315;Dbxref=Genbank:WP_023369238.1;Name=WP_023369238.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922611.1;locus_tag=LIO31_RS01315;product=formate/nitrite transporter family protein;protein_id=WP_023369238.1;transl_table=11 NZ_CP085086.1 RefSeq gene 252121 252966 . + . ID=gene-LIO31_RS01320;Name=LIO31_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01320 NZ_CP085086.1 Protein Homology CDS 252121 252966 . + 0 ID=cds-WP_023369240.1;Parent=gene-LIO31_RS01320;Dbxref=Genbank:WP_023369240.1;Name=WP_023369240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937554.1;locus_tag=LIO31_RS01320;product=aquaporin family protein;protein_id=WP_023369240.1;transl_table=11 NZ_CP085086.1 RefSeq gene 253095 254627 . + . ID=gene-LIO31_RS01325;Name=LIO31_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01325 NZ_CP085086.1 Protein Homology CDS 253095 254627 . + 0 ID=cds-WP_023369242.1;Parent=gene-LIO31_RS01325;Dbxref=Genbank:WP_023369242.1;Name=WP_023369242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921851.1;locus_tag=LIO31_RS01325;product=DUF853 family protein;protein_id=WP_023369242.1;transl_table=11 NZ_CP085086.1 RefSeq gene 254740 255348 . + . ID=gene-LIO31_RS01330;Name=LIO31_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01330 NZ_CP085086.1 Protein Homology CDS 254740 255348 . + 0 ID=cds-WP_023369244.1;Parent=gene-LIO31_RS01330;Dbxref=Genbank:WP_023369244.1;Name=WP_023369244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921852.1;locus_tag=LIO31_RS01330;product=CoA pyrophosphatase;protein_id=WP_023369244.1;transl_table=11 NZ_CP085086.1 RefSeq gene 255350 255538 . + . ID=gene-LIO31_RS01335;Name=LIO31_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01335 NZ_CP085086.1 GeneMarkS-2+ CDS 255350 255538 . + 0 ID=cds-WP_023369246.1;Parent=gene-LIO31_RS01335;Dbxref=Genbank:WP_023369246.1;Name=WP_023369246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS01335;product=hypothetical protein;protein_id=WP_023369246.1;transl_table=11 NZ_CP085086.1 RefSeq gene 255640 257685 . + . ID=gene-LIO31_RS01340;Name=LIO31_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01340 NZ_CP085086.1 Protein Homology CDS 255640 257685 . + 0 ID=cds-WP_074389717.1;Parent=gene-LIO31_RS01340;Dbxref=Genbank:WP_074389717.1;Name=WP_074389717.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775427.1;locus_tag=LIO31_RS01340;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_074389717.1;transl_table=11 NZ_CP085086.1 RefSeq gene 258119 258859 . + . ID=gene-LIO31_RS01345;Name=LIO31_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01345 NZ_CP085086.1 GeneMarkS-2+ CDS 258119 258859 . + 0 ID=cds-WP_226960422.1;Parent=gene-LIO31_RS01345;Dbxref=Genbank:WP_226960422.1;Name=WP_226960422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS01345;product=chemotaxis protein;protein_id=WP_226960422.1;transl_table=11 NZ_CP085086.1 RefSeq gene 258967 260247 . + . ID=gene-LIO31_RS01350;Name=LIO31_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01350 NZ_CP085086.1 Protein Homology CDS 258967 260247 . + 0 ID=cds-WP_226960423.1;Parent=gene-LIO31_RS01350;Dbxref=Genbank:WP_226960423.1;Name=WP_226960423.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921855.1;locus_tag=LIO31_RS01350;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_226960423.1;transl_table=11 NZ_CP085086.1 RefSeq gene 260667 261922 . - . ID=gene-LIO31_RS01355;Name=LIO31_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01355 NZ_CP085086.1 Protein Homology CDS 261853 261922 . - 0 ID=cds-WP_141666539.1;Parent=gene-LIO31_RS01355;Dbxref=Genbank:WP_141666539.1;Name=WP_141666539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943028.1;locus_tag=LIO31_RS01355;product=ISL3 family transposase;protein_id=WP_141666539.1;transl_table=11 NZ_CP085086.1 Protein Homology CDS 260667 261853 . - 2 ID=cds-WP_141666539.1;Parent=gene-LIO31_RS01355;Dbxref=Genbank:WP_141666539.1;Name=WP_141666539.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943028.1;locus_tag=LIO31_RS01355;product=ISL3 family transposase;protein_id=WP_141666539.1;transl_table=11 NZ_CP085086.1 RefSeq gene 262141 262290 . - . ID=gene-LIO31_RS01360;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LIO31_RS01360 NZ_CP085086.1 Protein Homology CDS 262141 262290 . - 0 ID=cds-WP_002262412.1;Parent=gene-LIO31_RS01360;Dbxref=Genbank:WP_002262412.1;Name=WP_002262412.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=LIO31_RS01360;product=50S ribosomal protein L33;protein_id=WP_002262412.1;transl_table=11 NZ_CP085086.1 RefSeq gene 262306 262488 . - . ID=gene-LIO31_RS01365;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LIO31_RS01365 NZ_CP085086.1 Protein Homology CDS 262306 262488 . - 0 ID=cds-WP_002937589.1;Parent=gene-LIO31_RS01365;Dbxref=Genbank:WP_002937589.1;Name=WP_002937589.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=LIO31_RS01365;product=50S ribosomal protein L32;protein_id=WP_002937589.1;transl_table=11 NZ_CP085086.1 RefSeq gene 262782 263483 . + . ID=gene-LIO31_RS01370;Name=LIO31_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01370 NZ_CP085086.1 Protein Homology CDS 262782 263483 . + 0 ID=cds-WP_023369258.1;Parent=gene-LIO31_RS01370;Dbxref=Genbank:WP_023369258.1;Name=WP_023369258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646394.1;locus_tag=LIO31_RS01370;product=hypothetical protein;protein_id=WP_023369258.1;transl_table=11 NZ_CP085086.1 RefSeq gene 263749 265032 . + . ID=gene-LIO31_RS01375;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LIO31_RS01375 NZ_CP085086.1 Protein Homology CDS 263749 265032 . + 0 ID=cds-WP_024402926.1;Parent=gene-LIO31_RS01375;Dbxref=Genbank:WP_024402926.1;Name=WP_024402926.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646395.1;locus_tag=LIO31_RS01375;product=histidine--tRNA ligase;protein_id=WP_024402926.1;transl_table=11 NZ_CP085086.1 RefSeq gene 265113 266138 . - . ID=gene-LIO31_RS01380;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LIO31_RS01380 NZ_CP085086.1 Protein Homology CDS 265113 266138 . - 0 ID=cds-WP_011921858.1;Parent=gene-LIO31_RS01380;Dbxref=Genbank:WP_011921858.1;Name=WP_011921858.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636220.1;locus_tag=LIO31_RS01380;product=alcohol dehydrogenase AdhP;protein_id=WP_011921858.1;transl_table=11 NZ_CP085086.1 RefSeq gene 266591 269242 . + . ID=gene-LIO31_RS01385;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=LIO31_RS01385 NZ_CP085086.1 Protein Homology CDS 266591 269242 . + 0 ID=cds-WP_074389625.1;Parent=gene-LIO31_RS01385;Dbxref=Genbank:WP_074389625.1;Name=WP_074389625.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763984.1;locus_tag=LIO31_RS01385;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_074389625.1;transl_table=11 NZ_CP085086.1 RefSeq gene 270249 271733 . + . ID=gene-LIO31_RS01390;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LIO31_RS01390 NZ_CP085086.1 Protein Homology CDS 270249 271733 . + 0 ID=cds-WP_024405443.1;Parent=gene-LIO31_RS01390;Dbxref=Genbank:WP_024405443.1;Name=WP_024405443.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595200.1;locus_tag=LIO31_RS01390;product=threonine synthase;protein_id=WP_024405443.1;transl_table=11 NZ_CP085086.1 RefSeq gene 271862 273622 . + . ID=gene-LIO31_RS01395;Name=LIO31_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01395 NZ_CP085086.1 Protein Homology CDS 271862 273622 . + 0 ID=cds-WP_074389624.1;Parent=gene-LIO31_RS01395;Dbxref=Genbank:WP_074389624.1;Name=WP_074389624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941225.1;locus_tag=LIO31_RS01395;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389624.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 273615 275281 . + . ID=gene-LIO31_RS01400;Name=LIO31_RS01400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01400;pseudo=true NZ_CP085086.1 Protein Homology CDS 273615 275281 . + 0 ID=cds-LIO31_RS01400;Parent=gene-LIO31_RS01400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646400.1;locus_tag=LIO31_RS01400;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 275282 275875 . + . ID=gene-LIO31_RS01405;Name=LIO31_RS01405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01405;pseudo=true NZ_CP085086.1 Protein Homology CDS 275282 275875 . + 0 ID=cds-LIO31_RS01405;Parent=gene-LIO31_RS01405;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636793.1;locus_tag=LIO31_RS01405;product=MptD family putative ECF transporter S component;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 275872 276366 . + . ID=gene-LIO31_RS01410;Name=LIO31_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01410 NZ_CP085086.1 Protein Homology CDS 275872 276366 . + 0 ID=cds-WP_226314561.1;Parent=gene-LIO31_RS01410;Dbxref=Genbank:WP_226314561.1;Name=WP_226314561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014420.2;locus_tag=LIO31_RS01410;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_226314561.1;transl_table=11 NZ_CP085086.1 RefSeq gene 276494 277921 . + . ID=gene-LIO31_RS01415;Name=LIO31_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01415 NZ_CP085086.1 Protein Homology CDS 276494 277921 . + 0 ID=cds-WP_024405820.1;Parent=gene-LIO31_RS01415;Dbxref=Genbank:WP_024405820.1;Name=WP_024405820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941239.1;locus_tag=LIO31_RS01415;product=ABC transporter ATP-binding protein;protein_id=WP_024405820.1;transl_table=11 NZ_CP085086.1 RefSeq gene 277927 279204 . + . ID=gene-LIO31_RS01420;Name=LIO31_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01420 NZ_CP085086.1 Protein Homology CDS 277927 279204 . + 0 ID=cds-WP_024405821.1;Parent=gene-LIO31_RS01420;Dbxref=Genbank:WP_024405821.1;Name=WP_024405821.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938993.1;locus_tag=LIO31_RS01420;product=MATE family efflux transporter;protein_id=WP_024405821.1;transl_table=11 NZ_CP085086.1 RefSeq gene 279559 280494 . + . ID=gene-LIO31_RS01425;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=LIO31_RS01425 NZ_CP085086.1 Protein Homology CDS 279559 280494 . + 0 ID=cds-WP_024405822.1;Parent=gene-LIO31_RS01425;Dbxref=Genbank:WP_024405822.1;Name=WP_024405822.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496;gbkey=CDS;gene=mvk;go_function=mevalonate kinase activity|0004496||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646405.1;locus_tag=LIO31_RS01425;product=mevalonate kinase;protein_id=WP_024405822.1;transl_table=11 NZ_CP085086.1 RefSeq gene 280487 281512 . + . ID=gene-LIO31_RS01430;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=LIO31_RS01430 NZ_CP085086.1 Protein Homology CDS 280487 281512 . + 0 ID=cds-WP_024382042.1;Parent=gene-LIO31_RS01430;Dbxref=Genbank:WP_024382042.1;Name=WP_024382042.1;Ontology_term=GO:0019287,GO:0004163;gbkey=CDS;gene=mvaD;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921869.1;locus_tag=LIO31_RS01430;product=diphosphomevalonate decarboxylase;protein_id=WP_024382042.1;transl_table=11 NZ_CP085086.1 RefSeq gene 281514 282593 . + . ID=gene-LIO31_RS01435;Name=LIO31_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01435 NZ_CP085086.1 Protein Homology CDS 281514 282593 . + 0 ID=cds-WP_024405823.1;Parent=gene-LIO31_RS01435;Dbxref=Genbank:WP_024405823.1;Name=WP_024405823.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646407.1;locus_tag=LIO31_RS01435;product=phosphomevalonate kinase;protein_id=WP_024405823.1;transl_table=11 NZ_CP085086.1 RefSeq gene 282604 283701 . + . ID=gene-LIO31_RS01440;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LIO31_RS01440 NZ_CP085086.1 Protein Homology CDS 282604 283701 . + 0 ID=cds-WP_024405824.1;Parent=gene-LIO31_RS01440;Dbxref=Genbank:WP_024405824.1;Name=WP_024405824.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646408.1;locus_tag=LIO31_RS01440;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_024405824.1;transl_table=11 NZ_CP085086.1 RefSeq gene 283796 285544 . - . ID=gene-LIO31_RS01445;Name=LIO31_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01445 NZ_CP085086.1 Protein Homology CDS 283796 285544 . - 0 ID=cds-WP_024386018.1;Parent=gene-LIO31_RS01445;Dbxref=Genbank:WP_024386018.1;Name=WP_024386018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646409.1;locus_tag=LIO31_RS01445;product=ABC transporter ATP-binding protein/permease;protein_id=WP_024386018.1;transl_table=11 NZ_CP085086.1 RefSeq gene 285534 287276 . - . ID=gene-LIO31_RS01450;Name=LIO31_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01450 NZ_CP085086.1 Protein Homology CDS 285534 287276 . - 0 ID=cds-WP_024405825.1;Parent=gene-LIO31_RS01450;Dbxref=Genbank:WP_024405825.1;Name=WP_024405825.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022464.1;locus_tag=LIO31_RS01450;product=ABC transporter transmembrane domain-containing protein;protein_id=WP_024405825.1;transl_table=11 NZ_CP085086.1 RefSeq gene 287534 287800 . + . ID=gene-LIO31_RS01455;Name=LIO31_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01455 NZ_CP085086.1 Protein Homology CDS 287534 287800 . + 0 ID=cds-WP_011921874.1;Parent=gene-LIO31_RS01455;Dbxref=Genbank:WP_011921874.1;Name=WP_011921874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905356.1;locus_tag=LIO31_RS01455;product=ACT domain-containing protein;protein_id=WP_011921874.1;transl_table=11 NZ_CP085086.1 RefSeq gene 287812 289149 . + . ID=gene-LIO31_RS01460;Name=LIO31_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01460 NZ_CP085086.1 Protein Homology CDS 287812 289149 . + 0 ID=cds-WP_074389623.1;Parent=gene-LIO31_RS01460;Dbxref=Genbank:WP_074389623.1;Name=WP_074389623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=LIO31_RS01460;product=PFL family protein;protein_id=WP_074389623.1;transl_table=11 NZ_CP085086.1 RefSeq gene 289225 289920 . + . ID=gene-LIO31_RS01465;Name=LIO31_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01465 NZ_CP085086.1 Protein Homology CDS 289225 289920 . + 0 ID=cds-WP_011921876.1;Parent=gene-LIO31_RS01465;Dbxref=Genbank:WP_011921876.1;Name=WP_011921876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636799.1;locus_tag=LIO31_RS01465;product=phosphoglycerate mutase family protein;protein_id=WP_011921876.1;transl_table=11 NZ_CP085086.1 RefSeq gene 290239 291273 . + . ID=gene-LIO31_RS01470;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LIO31_RS01470 NZ_CP085086.1 Protein Homology CDS 290239 291273 . + 0 ID=cds-WP_012774954.1;Parent=gene-LIO31_RS01470;Dbxref=Genbank:WP_012774954.1;Name=WP_012774954.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774954.1;locus_tag=LIO31_RS01470;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_012774954.1;transl_table=11 NZ_CP085086.1 RefSeq gene 291286 291798 . + . ID=gene-LIO31_RS01475;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LIO31_RS01475 NZ_CP085086.1 Protein Homology CDS 291286 291798 . + 0 ID=cds-WP_002943082.1;Parent=gene-LIO31_RS01475;Dbxref=Genbank:WP_002943082.1;Name=WP_002943082.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735407.1;locus_tag=LIO31_RS01475;product=nucleotide exchange factor GrpE;protein_id=WP_002943082.1;transl_table=11 NZ_CP085086.1 RefSeq gene 291895 293718 . + . ID=gene-LIO31_RS01480;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LIO31_RS01480 NZ_CP085086.1 Protein Homology CDS 291895 293718 . + 0 ID=cds-WP_024405827.1;Parent=gene-LIO31_RS01480;Dbxref=Genbank:WP_024405827.1;Name=WP_024405827.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=LIO31_RS01480;product=molecular chaperone DnaK;protein_id=WP_024405827.1;transl_table=11 NZ_CP085086.1 RefSeq gene 294137 295273 . + . ID=gene-LIO31_RS01485;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LIO31_RS01485 NZ_CP085086.1 Protein Homology CDS 294137 295273 . + 0 ID=cds-WP_023369307.1;Parent=gene-LIO31_RS01485;Dbxref=Genbank:WP_023369307.1;Name=WP_023369307.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905343.1;locus_tag=LIO31_RS01485;product=molecular chaperone DnaJ;protein_id=WP_023369307.1;transl_table=11 NZ_CP085086.1 RefSeq gene 295550 296377 . + . ID=gene-LIO31_RS01490;Name=LIO31_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01490 NZ_CP085086.1 Protein Homology CDS 295550 296377 . + 0 ID=cds-WP_024405828.1;Parent=gene-LIO31_RS01490;Dbxref=Genbank:WP_024405828.1;Name=WP_024405828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937501.1;locus_tag=LIO31_RS01490;product=lipoate--protein ligase family protein;protein_id=WP_024405828.1;transl_table=11 NZ_CP085086.1 RefSeq gene 296387 297835 . + . ID=gene-LIO31_RS01495;Name=LIO31_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01495 NZ_CP085086.1 Protein Homology CDS 296387 297835 . + 0 ID=cds-WP_024405829.1;Parent=gene-LIO31_RS01495;Dbxref=Genbank:WP_024405829.1;Name=WP_024405829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921882.1;locus_tag=LIO31_RS01495;product=amidase;protein_id=WP_024405829.1;transl_table=11 NZ_CP085086.1 RefSeq gene 297959 298834 . + . ID=gene-LIO31_RS01500;Name=LIO31_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01500 NZ_CP085086.1 Protein Homology CDS 297959 298834 . + 0 ID=cds-WP_015646427.1;Parent=gene-LIO31_RS01500;Dbxref=Genbank:WP_015646427.1;Name=WP_015646427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751024.1;locus_tag=LIO31_RS01500;product=transporter substrate-binding domain-containing protein;protein_id=WP_015646427.1;transl_table=11 NZ_CP085086.1 RefSeq gene 298925 299596 . + . ID=gene-LIO31_RS01505;Name=LIO31_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01505 NZ_CP085086.1 Protein Homology CDS 298925 299596 . + 0 ID=cds-WP_024405830.1;Parent=gene-LIO31_RS01505;Dbxref=Genbank:WP_024405830.1;Name=WP_024405830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937488.1;locus_tag=LIO31_RS01505;product=amino acid ABC transporter permease;protein_id=WP_024405830.1;transl_table=11 NZ_CP085086.1 RefSeq gene 299720 299929 . - . ID=gene-LIO31_RS01510;Name=LIO31_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01510 NZ_CP085086.1 Protein Homology CDS 299720 299929 . - 0 ID=cds-WP_012774957.1;Parent=gene-LIO31_RS01510;Dbxref=Genbank:WP_012774957.1;Name=WP_012774957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774957.1;locus_tag=LIO31_RS01510;product=helix-turn-helix transcriptional regulator;protein_id=WP_012774957.1;transl_table=11 NZ_CP085086.1 RefSeq gene 299931 300455 . - . ID=gene-LIO31_RS01515;Name=LIO31_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01515 NZ_CP085086.1 Protein Homology CDS 299931 300455 . - 0 ID=cds-WP_011922625.1;Parent=gene-LIO31_RS01515;Dbxref=Genbank:WP_011922625.1;Name=WP_011922625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735421.1;locus_tag=LIO31_RS01515;product=hypothetical protein;protein_id=WP_011922625.1;transl_table=11 NZ_CP085086.1 RefSeq gene 300590 302458 . - . ID=gene-LIO31_RS01520;Name=LIO31_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01520 NZ_CP085086.1 Protein Homology CDS 300590 302458 . - 0 ID=cds-WP_226960940.1;Parent=gene-LIO31_RS01520;Dbxref=Genbank:WP_226960940.1;Name=WP_226960940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011528775.1;locus_tag=LIO31_RS01520;product=heavy metal translocating P-type ATPase;protein_id=WP_226960940.1;transl_table=11 NZ_CP085086.1 RefSeq gene 302620 303075 . - . ID=gene-LIO31_RS01525;Name=LIO31_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01525 NZ_CP085086.1 Protein Homology CDS 302620 303075 . - 0 ID=cds-WP_024400323.1;Parent=gene-LIO31_RS01525;Dbxref=Genbank:WP_024400323.1;Name=WP_024400323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921888.1;locus_tag=LIO31_RS01525;product=transcriptional repressor;protein_id=WP_024400323.1;transl_table=11 NZ_CP085086.1 RefSeq gene 303242 303991 . + . ID=gene-LIO31_RS01530;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LIO31_RS01530 NZ_CP085086.1 Protein Homology CDS 303242 303991 . + 0 ID=cds-WP_074389328.1;Parent=gene-LIO31_RS01530;Dbxref=Genbank:WP_074389328.1;Name=WP_074389328.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011999919.1;locus_tag=LIO31_RS01530;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_074389328.1;transl_table=11 NZ_CP085086.1 RefSeq gene 303981 304742 . + . ID=gene-LIO31_RS01535;Name=LIO31_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01535 NZ_CP085086.1 Protein Homology CDS 303981 304742 . + 0 ID=cds-WP_074389327.1;Parent=gene-LIO31_RS01535;Dbxref=Genbank:WP_074389327.1;Name=WP_074389327.1;Ontology_term=GO:0009228,GO:0008972;gbkey=CDS;go_function=phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184219.1;locus_tag=LIO31_RS01535;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_074389327.1;transl_table=11 NZ_CP085086.1 RefSeq gene 304732 305217 . + . ID=gene-LIO31_RS01540;Name=LIO31_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01540 NZ_CP085086.1 Protein Homology CDS 304732 305217 . + 0 ID=cds-WP_074389326.1;Parent=gene-LIO31_RS01540;Dbxref=Genbank:WP_074389326.1;Name=WP_074389326.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636560.1;locus_tag=LIO31_RS01540;product=ECF transporter S component;protein_id=WP_074389326.1;transl_table=11 NZ_CP085086.1 RefSeq gene 305198 305764 . + . ID=gene-LIO31_RS01545;Name=LIO31_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01545 NZ_CP085086.1 Protein Homology CDS 305198 305764 . + 0 ID=cds-WP_024405833.1;Parent=gene-LIO31_RS01545;Dbxref=Genbank:WP_024405833.1;Name=WP_024405833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646436.1;locus_tag=LIO31_RS01545;product=TIGR01440 family protein;protein_id=WP_024405833.1;transl_table=11 NZ_CP085086.1 RefSeq gene 305764 306378 . + . ID=gene-LIO31_RS01550;Name=LIO31_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01550 NZ_CP085086.1 Protein Homology CDS 305764 306378 . + 0 ID=cds-WP_024400318.1;Parent=gene-LIO31_RS01550;Dbxref=Genbank:WP_024400318.1;Name=WP_024400318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921893.1;locus_tag=LIO31_RS01550;product=DUF1349 domain-containing protein;protein_id=WP_024400318.1;transl_table=11 NZ_CP085086.1 RefSeq gene 306652 307416 . + . ID=gene-LIO31_RS01555;Name=LIO31_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01555 NZ_CP085086.1 Protein Homology CDS 306652 307416 . + 0 ID=cds-WP_074389621.1;Parent=gene-LIO31_RS01555;Dbxref=Genbank:WP_074389621.1;Name=WP_074389621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921895.1;locus_tag=LIO31_RS01555;product=hypothetical protein;protein_id=WP_074389621.1;transl_table=11 NZ_CP085086.1 RefSeq gene 307697 308128 . + . ID=gene-LIO31_RS01560;Name=LIO31_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01560 NZ_CP085086.1 Protein Homology CDS 307697 308128 . + 0 ID=cds-WP_024382018.1;Parent=gene-LIO31_RS01560;Dbxref=Genbank:WP_024382018.1;Name=WP_024382018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637453.1;locus_tag=LIO31_RS01560;product=Rrf2 family transcriptional regulator;protein_id=WP_024382018.1;transl_table=11 NZ_CP085086.1 RefSeq gene 308208 309209 . + . ID=gene-LIO31_RS01565;Name=LIO31_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01565 NZ_CP085086.1 Protein Homology CDS 308208 309209 . + 0 ID=cds-WP_074389620.1;Parent=gene-LIO31_RS01565;Dbxref=Genbank:WP_074389620.1;Name=WP_074389620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646441.1;locus_tag=LIO31_RS01565;product=NADP-dependent oxidoreductase;protein_id=WP_074389620.1;transl_table=11 NZ_CP085086.1 RefSeq gene 309236 310081 . + . ID=gene-LIO31_RS01570;Name=LIO31_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01570 NZ_CP085086.1 Protein Homology CDS 309236 310081 . + 0 ID=cds-WP_024405836.1;Parent=gene-LIO31_RS01570;Dbxref=Genbank:WP_024405836.1;Name=WP_024405836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636563.1;locus_tag=LIO31_RS01570;product=alpha/beta hydrolase;protein_id=WP_024405836.1;transl_table=11 NZ_CP085086.1 RefSeq gene 310074 310943 . + . ID=gene-LIO31_RS01575;Name=LIO31_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01575 NZ_CP085086.1 Protein Homology CDS 310074 310943 . + 0 ID=cds-WP_074389324.1;Parent=gene-LIO31_RS01575;Dbxref=Genbank:WP_074389324.1;Name=WP_074389324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637456.1;locus_tag=LIO31_RS01575;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_074389324.1;transl_table=11 NZ_CP085086.1 RefSeq gene 310933 312147 . + . ID=gene-LIO31_RS01580;Name=LIO31_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01580 NZ_CP085086.1 Protein Homology CDS 310933 312147 . + 0 ID=cds-WP_212753085.1;Parent=gene-LIO31_RS01580;Dbxref=Genbank:WP_212753085.1;Name=WP_212753085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937437.1;locus_tag=LIO31_RS01580;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=WP_212753085.1;transl_table=11 NZ_CP085086.1 RefSeq gene 312302 312550 . + . ID=gene-LIO31_RS01585;Name=LIO31_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01585 NZ_CP085086.1 Protein Homology CDS 312302 312550 . + 0 ID=cds-WP_024382292.1;Parent=gene-LIO31_RS01585;Dbxref=Genbank:WP_024382292.1;Name=WP_024382292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637458.1;locus_tag=LIO31_RS01585;product=hypothetical protein;protein_id=WP_024382292.1;transl_table=11 NZ_CP085086.1 RefSeq gene 312606 312974 . + . ID=gene-LIO31_RS01590;Name=LIO31_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01590 NZ_CP085086.1 Protein Homology CDS 312606 312974 . + 0 ID=cds-WP_024402949.1;Parent=gene-LIO31_RS01590;Dbxref=Genbank:WP_024402949.1;Name=WP_024402949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009854296.1;locus_tag=LIO31_RS01590;product=hypothetical protein;protein_id=WP_024402949.1;transl_table=11 NZ_CP085086.1 RefSeq gene 313002 313550 . - . ID=gene-LIO31_RS01595;Name=LIO31_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01595 NZ_CP085086.1 Protein Homology CDS 313002 313550 . - 0 ID=cds-WP_024382290.1;Parent=gene-LIO31_RS01595;Dbxref=Genbank:WP_024382290.1;Name=WP_024382290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637460.1;locus_tag=LIO31_RS01595;product=TetR/AcrR family transcriptional regulator;protein_id=WP_024382290.1;transl_table=11 NZ_CP085086.1 RefSeq gene 313927 314556 . + . ID=gene-LIO31_RS01600;Name=LIO31_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01600 NZ_CP085086.1 Protein Homology CDS 313927 314556 . + 0 ID=cds-WP_024402950.1;Parent=gene-LIO31_RS01600;Dbxref=Genbank:WP_024402950.1;Name=WP_024402950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637461.1;locus_tag=LIO31_RS01600;product=NAD(P)H-binding protein;protein_id=WP_024402950.1;transl_table=11 NZ_CP085086.1 RefSeq gene 314566 315015 . + . ID=gene-LIO31_RS01605;Name=LIO31_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01605 NZ_CP085086.1 Protein Homology CDS 314566 315015 . + 0 ID=cds-WP_011921901.1;Parent=gene-LIO31_RS01605;Dbxref=Genbank:WP_011921901.1;Name=WP_011921901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195746.1;locus_tag=LIO31_RS01605;product=Rrf2 family transcriptional regulator;protein_id=WP_011921901.1;transl_table=11 NZ_CP085086.1 RefSeq gene 315275 315784 . - . ID=gene-LIO31_RS01610;Name=LIO31_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01610 NZ_CP085086.1 Protein Homology CDS 315275 315784 . - 0 ID=cds-WP_161945214.1;Parent=gene-LIO31_RS01610;Dbxref=Genbank:WP_161945214.1;Name=WP_161945214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917199.1;locus_tag=LIO31_RS01610;product=TetR/AcrR family transcriptional regulator;protein_id=WP_161945214.1;transl_table=11 NZ_CP085086.1 RefSeq gene 315925 316962 . + . ID=gene-LIO31_RS01615;Name=LIO31_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01615 NZ_CP085086.1 Protein Homology CDS 315925 316962 . + 0 ID=cds-WP_226960424.1;Parent=gene-LIO31_RS01615;Dbxref=Genbank:WP_226960424.1;Name=WP_226960424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638889.1;locus_tag=LIO31_RS01615;product=lipase;protein_id=WP_226960424.1;transl_table=11 NZ_CP085086.1 RefSeq gene 317069 318088 . + . ID=gene-LIO31_RS01620;Name=LIO31_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01620 NZ_CP085086.1 Protein Homology CDS 317069 318088 . + 0 ID=cds-WP_011921904.1;Parent=gene-LIO31_RS01620;Dbxref=Genbank:WP_011921904.1;Name=WP_011921904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646453.1;locus_tag=LIO31_RS01620;product=alpha/beta hydrolase;protein_id=WP_011921904.1;transl_table=11 NZ_CP085086.1 RefSeq gene 318309 319592 . + . ID=gene-LIO31_RS01625;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LIO31_RS01625 NZ_CP085086.1 Protein Homology CDS 318309 319592 . + 0 ID=cds-WP_024385514.1;Parent=gene-LIO31_RS01625;Dbxref=Genbank:WP_024385514.1;Name=WP_024385514.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466710.1;locus_tag=LIO31_RS01625;product=trigger factor;protein_id=WP_024385514.1;transl_table=11 NZ_CP085086.1 RefSeq gene 319682 320527 . + . ID=gene-LIO31_RS01630;Name=LIO31_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01630 NZ_CP085086.1 Protein Homology CDS 319682 320527 . + 0 ID=cds-WP_225535467.1;Parent=gene-LIO31_RS01630;Dbxref=Genbank:WP_225535467.1;Name=WP_225535467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735441.1;locus_tag=LIO31_RS01630;product=glycosyltransferase family 2 protein;protein_id=WP_225535467.1;transl_table=11 NZ_CP085086.1 RefSeq gene 320636 321556 . + . ID=gene-LIO31_RS01635;Name=LIO31_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01635 NZ_CP085086.1 Protein Homology CDS 320636 321556 . + 0 ID=cds-WP_074389619.1;Parent=gene-LIO31_RS01635;Dbxref=Genbank:WP_074389619.1;Name=WP_074389619.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744528.1;locus_tag=LIO31_RS01635;product=zinc ABC transporter substrate-binding protein;protein_id=WP_074389619.1;transl_table=11 NZ_CP085086.1 RefSeq gene 321590 324745 . + . ID=gene-LIO31_RS01640;Name=LIO31_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01640 NZ_CP085086.1 Protein Homology CDS 321590 324745 . + 0 ID=cds-WP_024405839.1;Parent=gene-LIO31_RS01640;Dbxref=Genbank:WP_024405839.1;Name=WP_024405839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646457.1;locus_tag=LIO31_RS01640;product=pneumococcal-type histidine triad protein;protein_id=WP_024405839.1;transl_table=11 NZ_CP085086.1 RefSeq gene 324872 325453 . + . ID=gene-LIO31_RS01645;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LIO31_RS01645 NZ_CP085086.1 Protein Homology CDS 324872 325453 . + 0 ID=cds-WP_011921912.1;Parent=gene-LIO31_RS01645;Dbxref=Genbank:WP_011921912.1;Name=WP_011921912.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735444.1;locus_tag=LIO31_RS01645;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_011921912.1;transl_table=11 NZ_CP085086.1 RefSeq gene 325646 327250 . + . ID=gene-LIO31_RS01650;Name=LIO31_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01650 NZ_CP085086.1 Protein Homology CDS 325646 327250 . + 0 ID=cds-WP_074389618.1;Parent=gene-LIO31_RS01650;Dbxref=Genbank:WP_074389618.1;Name=WP_074389618.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195759.1;locus_tag=LIO31_RS01650;product=CTP synthase;protein_id=WP_074389618.1;transl_table=11 NZ_CP085086.1 RefSeq gene 327531 327616 . + . ID=gene-LIO31_RS01655;Name=LIO31_RS01655;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS01655 NZ_CP085086.1 tRNAscan-SE tRNA 327531 327616 . + . ID=rna-LIO31_RS01655;Parent=gene-LIO31_RS01655;anticodon=(pos:327565..327567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01655;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 327531 327616 . + . ID=exon-LIO31_RS01655-1;Parent=rna-LIO31_RS01655;anticodon=(pos:327565..327567);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01655;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 327851 328732 . + . ID=gene-LIO31_RS01660;Name=LIO31_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01660 NZ_CP085086.1 Protein Homology CDS 327851 328732 . + 0 ID=cds-WP_011922635.1;Parent=gene-LIO31_RS01660;Dbxref=Genbank:WP_011922635.1;Name=WP_011922635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=LIO31_RS01660;product=fructose-bisphosphate aldolase;protein_id=WP_011922635.1;transl_table=11 NZ_CP085086.1 RefSeq gene 329125 329313 . + . ID=gene-LIO31_RS01665;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LIO31_RS01665 NZ_CP085086.1 Protein Homology CDS 329125 329313 . + 0 ID=cds-WP_001140948.1;Parent=gene-LIO31_RS01665;Dbxref=Genbank:WP_001140948.1;Name=WP_001140948.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=LIO31_RS01665;product=50S ribosomal protein L28;protein_id=WP_001140948.1;transl_table=11 NZ_CP085086.1 RefSeq gene 330016 331564 . + . ID=gene-LIO31_RS01670;Name=LIO31_RS01670;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS01670 NZ_CP085086.1 cmsearch rRNA 330016 331564 . + . ID=rna-LIO31_RS01670;Parent=gene-LIO31_RS01670;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01670;product=16S ribosomal RNA NZ_CP085086.1 cmsearch exon 330016 331564 . + . ID=exon-LIO31_RS01670-1;Parent=rna-LIO31_RS01670;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01670;product=16S ribosomal RNA NZ_CP085086.1 RefSeq gene 331618 331690 . + . ID=gene-LIO31_RS01675;Name=LIO31_RS01675;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS01675 NZ_CP085086.1 tRNAscan-SE tRNA 331618 331690 . + . ID=rna-LIO31_RS01675;Parent=gene-LIO31_RS01675;anticodon=(pos:331651..331653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01675;product=tRNA-Ala NZ_CP085086.1 tRNAscan-SE exon 331618 331690 . + . ID=exon-LIO31_RS01675-1;Parent=rna-LIO31_RS01675;anticodon=(pos:331651..331653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01675;product=tRNA-Ala NZ_CP085086.1 RefSeq gene 331971 334874 . + . ID=gene-LIO31_RS01680;Name=LIO31_RS01680;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS01680 NZ_CP085086.1 cmsearch rRNA 331971 334874 . + . ID=rna-LIO31_RS01680;Parent=gene-LIO31_RS01680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01680;product=23S ribosomal RNA NZ_CP085086.1 cmsearch exon 331971 334874 . + . ID=exon-LIO31_RS01680-1;Parent=rna-LIO31_RS01680;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01680;product=23S ribosomal RNA NZ_CP085086.1 RefSeq gene 334961 335076 . + . ID=gene-LIO31_RS01685;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LIO31_RS01685 NZ_CP085086.1 cmsearch rRNA 334961 335076 . + . ID=rna-LIO31_RS01685;Parent=gene-LIO31_RS01685;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01685;product=5S ribosomal RNA NZ_CP085086.1 cmsearch exon 334961 335076 . + . ID=exon-LIO31_RS01685-1;Parent=rna-LIO31_RS01685;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS01685;product=5S ribosomal RNA NZ_CP085086.1 RefSeq gene 335081 335153 . + . ID=gene-LIO31_RS01690;Name=LIO31_RS01690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS01690 NZ_CP085086.1 tRNAscan-SE tRNA 335081 335153 . + . ID=rna-LIO31_RS01690;Parent=gene-LIO31_RS01690;anticodon=(pos:335114..335116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01690;product=tRNA-Asn NZ_CP085086.1 tRNAscan-SE exon 335081 335153 . + . ID=exon-LIO31_RS01690-1;Parent=rna-LIO31_RS01690;anticodon=(pos:335114..335116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01690;product=tRNA-Asn NZ_CP085086.1 RefSeq gene 335176 335247 . + . ID=gene-LIO31_RS01695;Name=LIO31_RS01695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS01695 NZ_CP085086.1 tRNAscan-SE tRNA 335176 335247 . + . ID=rna-LIO31_RS01695;Parent=gene-LIO31_RS01695;anticodon=(pos:335209..335211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01695;product=tRNA-Glu NZ_CP085086.1 tRNAscan-SE exon 335176 335247 . + . ID=exon-LIO31_RS01695-1;Parent=rna-LIO31_RS01695;anticodon=(pos:335209..335211);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS01695;product=tRNA-Glu NZ_CP085086.1 RefSeq gene 335366 337384 . + . ID=gene-LIO31_RS01700;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LIO31_RS01700 NZ_CP085086.1 Protein Homology CDS 335366 337384 . + 0 ID=cds-WP_012774967.1;Parent=gene-LIO31_RS01700;Dbxref=Genbank:WP_012774967.1;Name=WP_012774967.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194311.1;locus_tag=LIO31_RS01700;product=ATP-dependent DNA helicase RecG;protein_id=WP_012774967.1;transl_table=11 NZ_CP085086.1 RefSeq gene 337448 338407 . - . ID=gene-LIO31_RS01705;Name=LIO31_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01705 NZ_CP085086.1 Protein Homology CDS 337448 338407 . - 0 ID=cds-WP_024381504.1;Parent=gene-LIO31_RS01705;Dbxref=Genbank:WP_024381504.1;Name=WP_024381504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195766.1;locus_tag=LIO31_RS01705;product=asparaginase;protein_id=WP_024381504.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 338477 339842 . + . ID=gene-LIO31_RS01710;Name=LIO31_RS01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01710;pseudo=true NZ_CP085086.1 Protein Homology CDS 338477 339842 . + 0 ID=cds-LIO31_RS01710;Parent=gene-LIO31_RS01710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891795.1;locus_tag=LIO31_RS01710;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 339858 340310 . - . ID=gene-LIO31_RS01715;Name=LIO31_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01715 NZ_CP085086.1 Protein Homology CDS 339858 340310 . - 0 ID=cds-WP_004195772.1;Parent=gene-LIO31_RS01715;Dbxref=Genbank:WP_004195772.1;Name=WP_004195772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445117.1;locus_tag=LIO31_RS01715;product=universal stress protein;protein_id=WP_004195772.1;transl_table=11 NZ_CP085086.1 RefSeq gene 340465 341679 . + . ID=gene-LIO31_RS01720;Name=LIO31_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01720 NZ_CP085086.1 Protein Homology CDS 340465 341679 . + 0 ID=cds-WP_011921925.1;Parent=gene-LIO31_RS01720;Dbxref=Genbank:WP_011921925.1;Name=WP_011921925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836593.1;locus_tag=LIO31_RS01720;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_011921925.1;transl_table=11 NZ_CP085086.1 RefSeq gene 342142 342930 . + . ID=gene-LIO31_RS01725;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=LIO31_RS01725 NZ_CP085086.1 Protein Homology CDS 342142 342930 . + 0 ID=cds-WP_024406060.1;Parent=gene-LIO31_RS01725;Dbxref=Genbank:WP_024406060.1;Name=WP_024406060.1;Ontology_term=GO:0006355,GO:0003700,GO:0005525,GO:0016597;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA,GTP binding|0005525||IEA,amino acid binding|0016597||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399190.1;locus_tag=LIO31_RS01725;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_024406060.1;transl_table=11 NZ_CP085086.1 RefSeq gene 342932 343483 . + . ID=gene-LIO31_RS01730;Name=LIO31_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01730 NZ_CP085086.1 Protein Homology CDS 342932 343483 . + 0 ID=cds-WP_024406059.1;Parent=gene-LIO31_RS01730;Dbxref=Genbank:WP_024406059.1;Name=WP_024406059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002268947.1;locus_tag=LIO31_RS01730;product=cysteine hydrolase;protein_id=WP_024406059.1;transl_table=11 NZ_CP085086.1 RefSeq gene 343676 344968 . + . ID=gene-LIO31_RS01735;Name=LIO31_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01735 NZ_CP085086.1 Protein Homology CDS 343676 344968 . + 0 ID=cds-WP_171840749.1-2;Parent=gene-LIO31_RS01735;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS01735;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 345692 346039 . + . ID=gene-LIO31_RS01740;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LIO31_RS01740 NZ_CP085086.1 Protein Homology CDS 345692 346039 . + 0 ID=cds-WP_011921928.1;Parent=gene-LIO31_RS01740;Dbxref=Genbank:WP_011921928.1;Name=WP_011921928.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=LIO31_RS01740;product=50S ribosomal protein L19;protein_id=WP_011921928.1;transl_table=11 NZ_CP085086.1 RefSeq gene 346222 346896 . + . ID=gene-LIO31_RS01745;Name=LIO31_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01745 NZ_CP085086.1 Protein Homology CDS 346222 346896 . + 0 ID=cds-WP_012774968.1;Parent=gene-LIO31_RS01745;Dbxref=Genbank:WP_012774968.1;Name=WP_012774968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195780.1;locus_tag=LIO31_RS01745;product=hydrolase;protein_id=WP_012774968.1;transl_table=11 NZ_CP085086.1 RefSeq gene 347114 347416 . + . ID=gene-LIO31_RS01750;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LIO31_RS01750 NZ_CP085086.1 Protein Homology CDS 347114 347416 . + 0 ID=cds-WP_024405610.1;Parent=gene-LIO31_RS01750;Dbxref=Genbank:WP_024405610.1;Name=WP_024405610.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644687.1;locus_tag=LIO31_RS01750;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_024405610.1;transl_table=11 NZ_CP085086.1 RefSeq gene 347416 348882 . + . ID=gene-LIO31_RS01755;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LIO31_RS01755 NZ_CP085086.1 Protein Homology CDS 347416 348882 . + 0 ID=cds-WP_024405609.1;Parent=gene-LIO31_RS01755;Dbxref=Genbank:WP_024405609.1;Name=WP_024405609.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295200.1;locus_tag=LIO31_RS01755;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_024405609.1;transl_table=11 NZ_CP085086.1 RefSeq gene 348882 350321 . + . ID=gene-LIO31_RS01760;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LIO31_RS01760 NZ_CP085086.1 Protein Homology CDS 348882 350321 . + 0 ID=cds-WP_024405608.1;Parent=gene-LIO31_RS01760;Dbxref=Genbank:WP_024405608.1;Name=WP_024405608.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770317.1;locus_tag=LIO31_RS01760;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_024405608.1;transl_table=11 NZ_CP085086.1 RefSeq gene 350690 350797 . + . ID=gene-LIO31_RS01765;Name=LIO31_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01765 NZ_CP085086.1 Protein Homology CDS 350690 350797 . + 0 ID=cds-WP_073259301.1;Parent=gene-LIO31_RS01765;Dbxref=Genbank:WP_073259301.1;Name=WP_073259301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002389461.1;locus_tag=LIO31_RS01765;product=putative holin-like toxin;protein_id=WP_073259301.1;transl_table=11 NZ_CP085086.1 RefSeq gene 351099 352097 . - . ID=gene-LIO31_RS01770;Name=LIO31_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01770 NZ_CP085086.1 Protein Homology CDS 351099 352097 . - 0 ID=cds-WP_024405607.1;Parent=gene-LIO31_RS01770;Dbxref=Genbank:WP_024405607.1;Name=WP_024405607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939037.1;locus_tag=LIO31_RS01770;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_024405607.1;transl_table=11 NZ_CP085086.1 RefSeq gene 352231 353394 . + . ID=gene-LIO31_RS01775;Name=LIO31_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01775 NZ_CP085086.1 Protein Homology CDS 352231 353394 . + 0 ID=cds-WP_024405606.1;Parent=gene-LIO31_RS01775;Dbxref=Genbank:WP_024405606.1;Name=WP_024405606.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735463.1;locus_tag=LIO31_RS01775;product=galactokinase;protein_id=WP_024405606.1;transl_table=11 NZ_CP085086.1 RefSeq gene 353613 355094 . + . ID=gene-LIO31_RS01780;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LIO31_RS01780 NZ_CP085086.1 Protein Homology CDS 353613 355094 . + 0 ID=cds-WP_074389626.1;Parent=gene-LIO31_RS01780;Dbxref=Genbank:WP_074389626.1;Name=WP_074389626.1;Ontology_term=GO:0019388,GO:0017103;gbkey=CDS;gene=galT;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921937.1;locus_tag=LIO31_RS01780;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_074389626.1;transl_table=11 NZ_CP085086.1 RefSeq gene 355441 356349 . + . ID=gene-LIO31_RS01785;Name=LIO31_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01785 NZ_CP085086.1 Protein Homology CDS 355441 356349 . + 0 ID=cds-WP_024405604.1;Parent=gene-LIO31_RS01785;Dbxref=Genbank:WP_024405604.1;Name=WP_024405604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774971.1;locus_tag=LIO31_RS01785;product=DMT family transporter;protein_id=WP_024405604.1;transl_table=11 NZ_CP085086.1 RefSeq gene 356537 357829 . - . ID=gene-LIO31_RS01790;Name=LIO31_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01790 NZ_CP085086.1 Protein Homology CDS 356537 357829 . - 0 ID=cds-WP_226960941.1;Parent=gene-LIO31_RS01790;Dbxref=Genbank:WP_226960941.1;Name=WP_226960941.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS01790;product=IS110 family transposase;protein_id=WP_226960941.1;transl_table=11 NZ_CP085086.1 RefSeq gene 358020 358649 . + . ID=gene-LIO31_RS01795;Name=LIO31_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01795 NZ_CP085086.1 Protein Homology CDS 358020 358649 . + 0 ID=cds-WP_024405594.1;Parent=gene-LIO31_RS01795;Dbxref=Genbank:WP_024405594.1;Name=WP_024405594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774972.1;locus_tag=LIO31_RS01795;product=copper homeostasis protein CutC;protein_id=WP_024405594.1;transl_table=11 NZ_CP085086.1 RefSeq gene 358886 359290 . + . ID=gene-LIO31_RS01800;Name=LIO31_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01800 NZ_CP085086.1 Protein Homology CDS 358886 359290 . + 0 ID=cds-WP_226960942.1;Parent=gene-LIO31_RS01800;Dbxref=Genbank:WP_226960942.1;Name=WP_226960942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735468.1;locus_tag=LIO31_RS01800;product=hypothetical protein;protein_id=WP_226960942.1;transl_table=11 NZ_CP085086.1 RefSeq gene 359414 359941 . + . ID=gene-LIO31_RS01805;Name=LIO31_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01805 NZ_CP085086.1 Protein Homology CDS 359414 359941 . + 0 ID=cds-WP_002935150.1;Parent=gene-LIO31_RS01805;Dbxref=Genbank:WP_002935150.1;Name=WP_002935150.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195301.1;locus_tag=LIO31_RS01805;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_002935150.1;transl_table=11 NZ_CP085086.1 RefSeq gene 359942 361048 . + . ID=gene-LIO31_RS01810;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=LIO31_RS01810 NZ_CP085086.1 Protein Homology CDS 359942 361048 . + 0 ID=cds-WP_024405596.1;Parent=gene-LIO31_RS01810;Dbxref=Genbank:WP_024405596.1;Name=WP_024405596.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391231.1;locus_tag=LIO31_RS01810;product=ribosome biogenesis GTPase YqeH;protein_id=WP_024405596.1;transl_table=11 NZ_CP085086.1 RefSeq gene 361318 361629 . + . ID=gene-LIO31_RS01815;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LIO31_RS01815 NZ_CP085086.1 Protein Homology CDS 361318 361629 . + 0 ID=cds-WP_024379048.1;Parent=gene-LIO31_RS01815;Dbxref=Genbank:WP_024379048.1;Name=WP_024379048.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060164.1;locus_tag=LIO31_RS01815;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_024379048.1;transl_table=11 NZ_CP085086.1 RefSeq gene 361642 362274 . + . ID=gene-LIO31_RS01820;Name=LIO31_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01820 NZ_CP085086.1 Protein Homology CDS 361642 362274 . + 0 ID=cds-WP_004195296.1;Parent=gene-LIO31_RS01820;Dbxref=Genbank:WP_004195296.1;Name=WP_004195296.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935147.1;locus_tag=LIO31_RS01820;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_004195296.1;transl_table=11 NZ_CP085086.1 RefSeq gene 362271 362858 . + . ID=gene-LIO31_RS01825;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=LIO31_RS01825 NZ_CP085086.1 Protein Homology CDS 362271 362858 . + 0 ID=cds-WP_074389364.1;Parent=gene-LIO31_RS01825;Dbxref=Genbank:WP_074389364.1;Name=WP_074389364.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730149.1;locus_tag=LIO31_RS01825;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_074389364.1;transl_table=11 NZ_CP085086.1 RefSeq gene 362861 363316 . + . ID=gene-LIO31_RS01830;Name=LIO31_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01830 NZ_CP085086.1 Protein Homology CDS 362861 363316 . + 0 ID=cds-WP_074389684.1;Parent=gene-LIO31_RS01830;Dbxref=Genbank:WP_074389684.1;Name=WP_074389684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195291.1;locus_tag=LIO31_RS01830;product=GNAT family N-acetyltransferase;protein_id=WP_074389684.1;transl_table=11 NZ_CP085086.1 RefSeq gene 363313 363822 . + . ID=gene-LIO31_RS01835;Name=LIO31_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01835 NZ_CP085086.1 Protein Homology CDS 363313 363822 . + 0 ID=cds-WP_024405599.1;Parent=gene-LIO31_RS01835;Dbxref=Genbank:WP_024405599.1;Name=WP_024405599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935141.1;locus_tag=LIO31_RS01835;product=cysteine hydrolase;protein_id=WP_024405599.1;transl_table=11 NZ_CP085086.1 RefSeq gene 363824 364183 . + . ID=gene-LIO31_RS01840;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LIO31_RS01840 NZ_CP085086.1 Protein Homology CDS 363824 364183 . + 0 ID=cds-WP_002935140.1;Parent=gene-LIO31_RS01840;Dbxref=Genbank:WP_002935140.1;Name=WP_002935140.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195286.1;locus_tag=LIO31_RS01840;product=ribosome silencing factor;protein_id=WP_002935140.1;transl_table=11 NZ_CP085086.1 RefSeq gene 364346 365092 . + . ID=gene-LIO31_RS01845;Name=LIO31_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01845 NZ_CP085086.1 Protein Homology CDS 364346 365092 . + 0 ID=cds-WP_024405601.1;Parent=gene-LIO31_RS01845;Dbxref=Genbank:WP_024405601.1;Name=WP_024405601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646478.1;locus_tag=LIO31_RS01845;product=class I SAM-dependent methyltransferase;protein_id=WP_024405601.1;transl_table=11 NZ_CP085086.1 RefSeq gene 365089 366177 . + . ID=gene-LIO31_RS01850;Name=LIO31_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01850 NZ_CP085086.1 Protein Homology CDS 365089 366177 . + 0 ID=cds-WP_024405602.1;Parent=gene-LIO31_RS01850;Dbxref=Genbank:WP_024405602.1;Name=WP_024405602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646479.1;locus_tag=LIO31_RS01850;product=nucleotidyltransferase;protein_id=WP_024405602.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 366179 366878 . + . ID=gene-LIO31_RS01855;Name=LIO31_RS01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01855;pseudo=true NZ_CP085086.1 Protein Homology CDS 366179 366878 . + 0 ID=cds-LIO31_RS01855;Parent=gene-LIO31_RS01855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018164890.1;locus_tag=LIO31_RS01855;product=ion transporter;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 366947 367675 . + . ID=gene-LIO31_RS01860;Name=LIO31_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01860 NZ_CP085086.1 Protein Homology CDS 366947 367675 . + 0 ID=cds-WP_024405603.1;Parent=gene-LIO31_RS01860;Dbxref=Genbank:WP_024405603.1;Name=WP_024405603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922653.1;locus_tag=LIO31_RS01860;product=MerR family transcriptional regulator;protein_id=WP_024405603.1;transl_table=11 NZ_CP085086.1 RefSeq gene 367884 369176 . - . ID=gene-LIO31_RS01865;Name=LIO31_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01865 NZ_CP085086.1 Protein Homology CDS 367884 369176 . - 0 ID=cds-WP_171840749.1-3;Parent=gene-LIO31_RS01865;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS01865;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 369394 369648 . + . ID=gene-LIO31_RS01870;Name=LIO31_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01870 NZ_CP085086.1 Protein Homology CDS 369394 369648 . + 0 ID=cds-WP_226960425.1;Parent=gene-LIO31_RS01870;Dbxref=Genbank:WP_226960425.1;Name=WP_226960425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910633.1;locus_tag=LIO31_RS01870;product=PTS lactose transporter subunit IIB;protein_id=WP_226960425.1;transl_table=11 NZ_CP085086.1 RefSeq gene 369728 371071 . + . ID=gene-LIO31_RS01875;Name=LIO31_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01875 NZ_CP085086.1 Protein Homology CDS 369728 371071 . + 0 ID=cds-WP_024380515.1;Parent=gene-LIO31_RS01875;Dbxref=Genbank:WP_024380515.1;Name=WP_024380515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007517532.1;locus_tag=LIO31_RS01875;product=DEAD/DEAH box helicase;protein_id=WP_024380515.1;transl_table=11 NZ_CP085086.1 RefSeq gene 371089 371313 . + . ID=gene-LIO31_RS01880;Name=LIO31_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01880 NZ_CP085086.1 Protein Homology CDS 371089 371313 . + 0 ID=cds-WP_002936682.1;Parent=gene-LIO31_RS01880;Dbxref=Genbank:WP_002936682.1;Name=WP_002936682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936682.1;locus_tag=LIO31_RS01880;product=DUF4059 family protein;protein_id=WP_002936682.1;transl_table=11 NZ_CP085086.1 RefSeq gene 371327 372244 . + . ID=gene-LIO31_RS01885;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LIO31_RS01885 NZ_CP085086.1 Protein Homology CDS 371327 372244 . + 0 ID=cds-WP_002942687.1;Parent=gene-LIO31_RS01885;Dbxref=Genbank:WP_002942687.1;Name=WP_002942687.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638520.1;locus_tag=LIO31_RS01885;product=thioredoxin-disulfide reductase;protein_id=WP_002942687.1;transl_table=11 NZ_CP085086.1 RefSeq gene 372254 372793 . + . ID=gene-LIO31_RS01890;Name=LIO31_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01890 NZ_CP085086.1 Protein Homology CDS 372254 372793 . + 0 ID=cds-WP_024385904.1;Parent=gene-LIO31_RS01890;Dbxref=Genbank:WP_024385904.1;Name=WP_024385904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942690.1;locus_tag=LIO31_RS01890;product=DUF177 domain-containing protein;protein_id=WP_024385904.1;transl_table=11 NZ_CP085086.1 RefSeq gene 372890 374317 . + . ID=gene-LIO31_RS01895;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LIO31_RS01895 NZ_CP085086.1 Protein Homology CDS 372890 374317 . + 0 ID=cds-WP_002942698.1;Parent=gene-LIO31_RS01895;Dbxref=Genbank:WP_002942698.1;Name=WP_002942698.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028448.1;locus_tag=LIO31_RS01895;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_002942698.1;transl_table=11 NZ_CP085086.1 RefSeq gene 374399 375088 . + . ID=gene-LIO31_RS01900;Name=LIO31_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01900 NZ_CP085086.1 Protein Homology CDS 374399 375088 . + 0 ID=cds-WP_012027645.1;Parent=gene-LIO31_RS01900;Dbxref=Genbank:WP_012027645.1;Name=WP_012027645.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736256.1;locus_tag=LIO31_RS01900;product=winged helix-turn-helix domain-containing protein;protein_id=WP_012027645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 375178 376308 . + . ID=gene-LIO31_RS01905;Name=LIO31_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01905 NZ_CP085086.1 Protein Homology CDS 375178 376308 . + 0 ID=cds-WP_012027644.1;Parent=gene-LIO31_RS01905;Dbxref=Genbank:WP_012027644.1;Name=WP_012027644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917300.1;locus_tag=LIO31_RS01905;product=AI-2E family transporter;protein_id=WP_012027644.1;transl_table=11 NZ_CP085086.1 RefSeq gene 376380 376871 . + . ID=gene-LIO31_RS01910;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LIO31_RS01910 NZ_CP085086.1 Protein Homology CDS 376380 376871 . + 0 ID=cds-WP_002938341.1;Parent=gene-LIO31_RS01910;Dbxref=Genbank:WP_002938341.1;Name=WP_002938341.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938341.1;locus_tag=LIO31_RS01910;product=transcriptional regulator NrdR;protein_id=WP_002938341.1;transl_table=11 NZ_CP085086.1 RefSeq gene 376858 378009 . + . ID=gene-LIO31_RS01915;Name=LIO31_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01915 NZ_CP085086.1 Protein Homology CDS 376858 378009 . + 0 ID=cds-WP_024386752.1;Parent=gene-LIO31_RS01915;Dbxref=Genbank:WP_024386752.1;Name=WP_024386752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647270.1;locus_tag=LIO31_RS01915;product=replication initiation/membrane attachment protein;protein_id=WP_024386752.1;transl_table=11 NZ_CP085086.1 RefSeq gene 378009 378908 . + . ID=gene-LIO31_RS01920;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=LIO31_RS01920 NZ_CP085086.1 Protein Homology CDS 378009 378908 . + 0 ID=cds-WP_002938337.1;Parent=gene-LIO31_RS01920;Dbxref=Genbank:WP_002938337.1;Name=WP_002938337.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938337.1;locus_tag=LIO31_RS01920;product=primosomal protein DnaI;protein_id=WP_002938337.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 378905 379618 . + . ID=gene-LIO31_RS01925;Name=LIO31_RS01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS01925;pseudo=true NZ_CP085086.1 Protein Homology CDS 378905 379618 . + 0 ID=cds-LIO31_RS01925;Parent=gene-LIO31_RS01925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647269.1;locus_tag=LIO31_RS01925;product=nitroreductase family protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 379637 380947 . + . ID=gene-LIO31_RS01930;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LIO31_RS01930 NZ_CP085086.1 Protein Homology CDS 379637 380947 . + 0 ID=cds-WP_012027640.1;Parent=gene-LIO31_RS01930;Dbxref=Genbank:WP_012027640.1;Name=WP_012027640.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=LIO31_RS01930;product=ribosome biogenesis GTPase Der;protein_id=WP_012027640.1;transl_table=11 NZ_CP085086.1 RefSeq gene 381355 381663 . + . ID=gene-LIO31_RS01935;Name=LIO31_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01935 NZ_CP085086.1 Protein Homology CDS 381355 381663 . + 0 ID=cds-WP_024399415.1;Parent=gene-LIO31_RS01935;Dbxref=Genbank:WP_024399415.1;Name=WP_024399415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730512.1;locus_tag=LIO31_RS01935;product=hypothetical protein;protein_id=WP_024399415.1;transl_table=11 NZ_CP085086.1 RefSeq gene 381802 384894 . + . ID=gene-LIO31_RS01940;Name=LIO31_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01940 NZ_CP085086.1 Protein Homology CDS 381802 384894 . + 0 ID=cds-WP_074389847.1;Parent=gene-LIO31_RS01940;Dbxref=Genbank:WP_074389847.1;Name=WP_074389847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942717.1;locus_tag=LIO31_RS01940;product=SNF2 family helicase;protein_id=WP_074389847.1;transl_table=11 NZ_CP085086.1 RefSeq gene 384973 385635 . + . ID=gene-LIO31_RS01945;Name=LIO31_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01945 NZ_CP085086.1 Protein Homology CDS 384973 385635 . + 0 ID=cds-WP_024402634.1;Parent=gene-LIO31_RS01945;Dbxref=Genbank:WP_024402634.1;Name=WP_024402634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638511.1;locus_tag=LIO31_RS01945;product=hypothetical protein;protein_id=WP_024402634.1;transl_table=11 NZ_CP085086.1 RefSeq gene 385637 386968 . + . ID=gene-LIO31_RS01950;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LIO31_RS01950 NZ_CP085086.1 Protein Homology CDS 385637 386968 . + 0 ID=cds-WP_014638510.1;Parent=gene-LIO31_RS01950;Dbxref=Genbank:WP_014638510.1;Name=WP_014638510.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511317.1;locus_tag=LIO31_RS01950;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_014638510.1;transl_table=11 NZ_CP085086.1 RefSeq gene 387030 387515 . + . ID=gene-LIO31_RS01955;Name=LIO31_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01955 NZ_CP085086.1 Protein Homology CDS 387030 387515 . + 0 ID=cds-WP_024405587.1;Parent=gene-LIO31_RS01955;Dbxref=Genbank:WP_024405587.1;Name=WP_024405587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647263.1;locus_tag=LIO31_RS01955;product=GNAT family N-acetyltransferase;protein_id=WP_024405587.1;transl_table=11 NZ_CP085086.1 RefSeq gene 387587 389404 . + . ID=gene-LIO31_RS01960;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LIO31_RS01960 NZ_CP085086.1 Protein Homology CDS 387587 389404 . + 0 ID=cds-WP_024382405.1;Parent=gene-LIO31_RS01960;Dbxref=Genbank:WP_024382405.1;Name=WP_024382405.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736248.1;locus_tag=LIO31_RS01960;product=endolytic transglycosylase MltG;protein_id=WP_024382405.1;transl_table=11 NZ_CP085086.1 RefSeq gene 389478 389960 . + . ID=gene-LIO31_RS01965;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LIO31_RS01965 NZ_CP085086.1 Protein Homology CDS 389478 389960 . + 0 ID=cds-WP_002938298.1;Parent=gene-LIO31_RS01965;Dbxref=Genbank:WP_002938298.1;Name=WP_002938298.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377052.1;locus_tag=LIO31_RS01965;product=transcription elongation factor GreA;protein_id=WP_002938298.1;transl_table=11 NZ_CP085086.1 RefSeq gene 390159 391070 . - . ID=gene-LIO31_RS01970;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LIO31_RS01970 NZ_CP085086.1 Protein Homology CDS 390159 391070 . - 0 ID=cds-WP_024405586.1;Parent=gene-LIO31_RS01970;Dbxref=Genbank:WP_024405586.1;Name=WP_024405586.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897015.1;locus_tag=LIO31_RS01970;product=membrane protein insertase YidC;protein_id=WP_024405586.1;transl_table=11 NZ_CP085086.1 RefSeq gene 391140 391421 . - . ID=gene-LIO31_RS01975;Name=LIO31_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01975 NZ_CP085086.1 Protein Homology CDS 391140 391421 . - 0 ID=cds-WP_024405585.1;Parent=gene-LIO31_RS01975;Dbxref=Genbank:WP_024405585.1;Name=WP_024405585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938296.1;locus_tag=LIO31_RS01975;product=acylphosphatase;protein_id=WP_024405585.1;transl_table=11 NZ_CP085086.1 RefSeq gene 391552 392292 . + . ID=gene-LIO31_RS01980;Name=LIO31_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01980 NZ_CP085086.1 Protein Homology CDS 391552 392292 . + 0 ID=cds-WP_024402636.1;Parent=gene-LIO31_RS01980;Dbxref=Genbank:WP_024402636.1;Name=WP_024402636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647258.1;locus_tag=LIO31_RS01980;product=RNA methyltransferase;protein_id=WP_024402636.1;transl_table=11 NZ_CP085086.1 RefSeq gene 392339 392821 . + . ID=gene-LIO31_RS01985;Name=LIO31_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01985 NZ_CP085086.1 Protein Homology CDS 392339 392821 . + 0 ID=cds-WP_024405584.1;Parent=gene-LIO31_RS01985;Dbxref=Genbank:WP_024405584.1;Name=WP_024405584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027625.1;locus_tag=LIO31_RS01985;product=HD domain-containing protein;protein_id=WP_024405584.1;transl_table=11 NZ_CP085086.1 RefSeq gene 392843 393544 . + . ID=gene-LIO31_RS01990;Name=LIO31_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS01990 NZ_CP085086.1 Protein Homology CDS 392843 393544 . + 0 ID=cds-WP_024405583.1;Parent=gene-LIO31_RS01990;Dbxref=Genbank:WP_024405583.1;Name=WP_024405583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942739.1;locus_tag=LIO31_RS01990;product=Bax inhibitor-1/YccA family protein;protein_id=WP_024405583.1;transl_table=11 NZ_CP085086.1 RefSeq gene 393594 394925 . - . ID=gene-LIO31_RS01995;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=LIO31_RS01995 NZ_CP085086.1 Protein Homology CDS 393594 394925 . - 0 ID=cds-WP_024405582.1;Parent=gene-LIO31_RS01995;Dbxref=Genbank:WP_024405582.1;Name=WP_024405582.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942740.1;locus_tag=LIO31_RS01995;product=aminopeptidase C;protein_id=WP_024405582.1;transl_table=11 NZ_CP085086.1 RefSeq gene 395059 396306 . + . ID=gene-LIO31_RS02000;Name=LIO31_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02000 NZ_CP085086.1 Protein Homology CDS 395059 396306 . + 0 ID=cds-WP_074389438.1;Parent=gene-LIO31_RS02000;Dbxref=Genbank:WP_074389438.1;Name=WP_074389438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736243.1;locus_tag=LIO31_RS02000;product=diaminopimelate decarboxylase;protein_id=WP_074389438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 396409 396645 . + . ID=gene-LIO31_RS02005;Name=LIO31_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02005 NZ_CP085086.1 Protein Homology CDS 396409 396645 . + 0 ID=cds-WP_002939206.1;Parent=gene-LIO31_RS02005;Dbxref=Genbank:WP_002939206.1;Name=WP_002939206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939206.1;locus_tag=LIO31_RS02005;product=YneF family protein;protein_id=WP_002939206.1;transl_table=11 NZ_CP085086.1 RefSeq gene 396735 397529 . + . ID=gene-LIO31_RS02010;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=LIO31_RS02010 NZ_CP085086.1 Protein Homology CDS 396735 397529 . + 0 ID=cds-WP_024405580.1;Parent=gene-LIO31_RS02010;Dbxref=Genbank:WP_024405580.1;Name=WP_024405580.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931399.1;locus_tag=LIO31_RS02010;product=glutamate racemase;protein_id=WP_024405580.1;transl_table=11 NZ_CP085086.1 RefSeq gene 397526 398536 . + . ID=gene-LIO31_RS02015;Name=LIO31_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02015 NZ_CP085086.1 Protein Homology CDS 397526 398536 . + 0 ID=cds-WP_024405579.1;Parent=gene-LIO31_RS02015;Dbxref=Genbank:WP_024405579.1;Name=WP_024405579.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638501.1;locus_tag=LIO31_RS02015;product=nucleoside-triphosphate diphosphatase;protein_id=WP_024405579.1;transl_table=11 NZ_CP085086.1 RefSeq gene 398509 399036 . + . ID=gene-LIO31_RS02020;Name=LIO31_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02020 NZ_CP085086.1 Protein Homology CDS 398509 399036 . + 0 ID=cds-WP_024405578.1;Parent=gene-LIO31_RS02020;Dbxref=Genbank:WP_024405578.1;Name=WP_024405578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942749.1;locus_tag=LIO31_RS02020;product=metallophosphoesterase;protein_id=WP_024405578.1;transl_table=11 NZ_CP085086.1 RefSeq gene 399033 399491 . + . ID=gene-LIO31_RS02025;Name=LIO31_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02025 NZ_CP085086.1 Protein Homology CDS 399033 399491 . + 0 ID=cds-WP_012027618.1;Parent=gene-LIO31_RS02025;Dbxref=Genbank:WP_012027618.1;Name=WP_012027618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027618.1;locus_tag=LIO31_RS02025;product=CBS domain-containing protein;protein_id=WP_012027618.1;transl_table=11 NZ_CP085086.1 RefSeq gene 399488 400219 . + . ID=gene-LIO31_RS02030;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LIO31_RS02030 NZ_CP085086.1 Protein Homology CDS 399488 400219 . + 0 ID=cds-WP_024402645.1;Parent=gene-LIO31_RS02030;Dbxref=Genbank:WP_024402645.1;Name=WP_024402645.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027617.1;locus_tag=LIO31_RS02030;product=site-specific tyrosine recombinase XerD;protein_id=WP_024402645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 400219 400938 . + . ID=gene-LIO31_RS02035;Name=LIO31_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02035 NZ_CP085086.1 Protein Homology CDS 400219 400938 . + 0 ID=cds-WP_002942755.1;Parent=gene-LIO31_RS02035;Dbxref=Genbank:WP_002942755.1;Name=WP_002942755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939230.1;locus_tag=LIO31_RS02035;product=segregation/condensation protein A;protein_id=WP_002942755.1;transl_table=11 NZ_CP085086.1 RefSeq gene 400922 401491 . + . ID=gene-LIO31_RS02040;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LIO31_RS02040 NZ_CP085086.1 Protein Homology CDS 400922 401491 . + 0 ID=cds-WP_023371271.1;Parent=gene-LIO31_RS02040;Dbxref=Genbank:WP_023371271.1;Name=WP_023371271.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942769.1;locus_tag=LIO31_RS02040;product=SMC-Scp complex subunit ScpB;protein_id=WP_023371271.1;transl_table=11 NZ_CP085086.1 RefSeq gene 401481 402212 . + . ID=gene-LIO31_RS02045;Name=LIO31_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02045 NZ_CP085086.1 Protein Homology CDS 401481 402212 . + 0 ID=cds-WP_002939235.1;Parent=gene-LIO31_RS02045;Dbxref=Genbank:WP_002939235.1;Name=WP_002939235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939235.1;locus_tag=LIO31_RS02045;product=rRNA pseudouridine synthase;protein_id=WP_002939235.1;transl_table=11 NZ_CP085086.1 RefSeq gene 402212 402451 . + . ID=gene-LIO31_RS02050;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LIO31_RS02050 NZ_CP085086.1 Protein Homology CDS 402212 402451 . + 0 ID=cds-WP_024383828.1;Parent=gene-LIO31_RS02050;Dbxref=Genbank:WP_024383828.1;Name=WP_024383828.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775301.1;locus_tag=LIO31_RS02050;product=membrane protein insertion efficiency factor YidD;protein_id=WP_024383828.1;transl_table=11 NZ_CP085086.1 RefSeq gene 402941 403486 . + . ID=gene-LIO31_RS02055;Name=LIO31_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02055 NZ_CP085086.1 Protein Homology CDS 402941 403486 . + 0 ID=cds-WP_024381673.1;Parent=gene-LIO31_RS02055;Dbxref=Genbank:WP_024381673.1;Name=WP_024381673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942783.1;locus_tag=LIO31_RS02055;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_024381673.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 403536 403750 . + . ID=id-NZ_CP085086.1:403536..403750;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 403810 404367 . + . ID=gene-LIO31_RS02060;Name=LIO31_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02060 NZ_CP085086.1 Protein Homology CDS 403810 404367 . + 0 ID=cds-WP_024405576.1;Parent=gene-LIO31_RS02060;Dbxref=Genbank:WP_024405576.1;Name=WP_024405576.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942784.1;locus_tag=LIO31_RS02060;product=ECF transporter S component;protein_id=WP_024405576.1;transl_table=11 NZ_CP085086.1 RefSeq gene 404392 405045 . + . ID=gene-LIO31_RS02065;Name=LIO31_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02065 NZ_CP085086.1 Protein Homology CDS 404392 405045 . + 0 ID=cds-WP_024405575.1;Parent=gene-LIO31_RS02065;Dbxref=Genbank:WP_024405575.1;Name=WP_024405575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942785.1;locus_tag=LIO31_RS02065;product=phosphatase PAP2 family protein;protein_id=WP_024405575.1;transl_table=11 NZ_CP085086.1 RefSeq gene 405271 407070 . - . ID=gene-LIO31_RS02070;Name=LIO31_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02070 NZ_CP085086.1 Protein Homology CDS 405271 407070 . - 0 ID=cds-WP_024405574.1;Parent=gene-LIO31_RS02070;Dbxref=Genbank:WP_024405574.1;Name=WP_024405574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939444.1;locus_tag=LIO31_RS02070;product=acyltransferase;protein_id=WP_024405574.1;transl_table=11 NZ_CP085086.1 RefSeq gene 407060 407482 . - . ID=gene-LIO31_RS02075;Name=LIO31_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02075 NZ_CP085086.1 Protein Homology CDS 407060 407482 . - 0 ID=cds-WP_013730506.1;Parent=gene-LIO31_RS02075;Dbxref=Genbank:WP_013730506.1;Name=WP_013730506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942794.1;locus_tag=LIO31_RS02075;product=membrane protein;protein_id=WP_013730506.1;transl_table=11 NZ_CP085086.1 RefSeq gene 407614 408048 . - . ID=gene-LIO31_RS02080;Name=LIO31_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02080 NZ_CP085086.1 Protein Homology CDS 407614 408048 . - 0 ID=cds-WP_013730505.1;Parent=gene-LIO31_RS02080;Dbxref=Genbank:WP_013730505.1;Name=WP_013730505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942799.1;locus_tag=LIO31_RS02080;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_013730505.1;transl_table=11 NZ_CP085086.1 RefSeq gene 408218 408430 . - . ID=gene-LIO31_RS02085;Name=LIO31_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02085 NZ_CP085086.1 Protein Homology CDS 408218 408430 . - 0 ID=cds-WP_024382394.1;Parent=gene-LIO31_RS02085;Dbxref=Genbank:WP_024382394.1;Name=WP_024382394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730504.1;locus_tag=LIO31_RS02085;product=CsbD family protein;protein_id=WP_024382394.1;transl_table=11 NZ_CP085086.1 RefSeq gene 408635 409153 . + . ID=gene-LIO31_RS02090;Name=LIO31_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02090 NZ_CP085086.1 Protein Homology CDS 408635 409153 . + 0 ID=cds-WP_004194743.1;Parent=gene-LIO31_RS02090;Dbxref=Genbank:WP_004194743.1;Name=WP_004194743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027605.1;locus_tag=LIO31_RS02090;product=DNA starvation/stationary phase protection protein;protein_id=WP_004194743.1;transl_table=11 NZ_CP085086.1 RefSeq gene 409410 410288 . + . ID=gene-LIO31_RS02095;Name=LIO31_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02095 NZ_CP085086.1 Protein Homology CDS 409410 410288 . + 0 ID=cds-WP_024382393.1;Parent=gene-LIO31_RS02095;Dbxref=Genbank:WP_024382393.1;Name=WP_024382393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638491.1;locus_tag=LIO31_RS02095;product=ABC transporter ATP-binding protein;protein_id=WP_024382393.1;transl_table=11 NZ_CP085086.1 RefSeq gene 410285 411016 . + . ID=gene-LIO31_RS02100;Name=LIO31_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02100 NZ_CP085086.1 Protein Homology CDS 410285 411016 . + 0 ID=cds-WP_024405573.1;Parent=gene-LIO31_RS02100;Dbxref=Genbank:WP_024405573.1;Name=WP_024405573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942812.1;locus_tag=LIO31_RS02100;product=ABC transporter permease;protein_id=WP_024405573.1;transl_table=11 NZ_CP085086.1 RefSeq gene 411025 412119 . + . ID=gene-LIO31_RS02105;Name=LIO31_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02105 NZ_CP085086.1 Protein Homology CDS 411025 412119 . + 0 ID=cds-WP_171840758.1;Parent=gene-LIO31_RS02105;Dbxref=Genbank:WP_171840758.1;Name=WP_171840758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027602.1;locus_tag=LIO31_RS02105;product=histidine kinase;protein_id=WP_171840758.1;transl_table=11 NZ_CP085086.1 RefSeq gene 412116 412718 . + . ID=gene-LIO31_RS02110;Name=LIO31_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02110 NZ_CP085086.1 Protein Homology CDS 412116 412718 . + 0 ID=cds-WP_024405571.1;Parent=gene-LIO31_RS02110;Dbxref=Genbank:WP_024405571.1;Name=WP_024405571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194738.1;locus_tag=LIO31_RS02110;product=response regulator transcription factor;protein_id=WP_024405571.1;transl_table=11 NZ_CP085086.1 RefSeq gene 413026 413244 . + . ID=gene-LIO31_RS02115;Name=LIO31_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02115 NZ_CP085086.1 Protein Homology CDS 413026 413244 . + 0 ID=cds-WP_024405570.1;Parent=gene-LIO31_RS02115;Dbxref=Genbank:WP_024405570.1;Name=WP_024405570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194736.1;locus_tag=LIO31_RS02115;product=YqgQ family protein;protein_id=WP_024405570.1;transl_table=11 NZ_CP085086.1 RefSeq gene 413244 413630 . + . ID=gene-LIO31_RS02120;Name=LIO31_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02120 NZ_CP085086.1 Protein Homology CDS 413244 413630 . + 0 ID=cds-WP_004194735.1;Parent=gene-LIO31_RS02120;Dbxref=Genbank:WP_004194735.1;Name=WP_004194735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647236.1;locus_tag=LIO31_RS02120;product=rhodanese-like domain-containing protein;protein_id=WP_004194735.1;transl_table=11 NZ_CP085086.1 RefSeq gene 413687 414409 . + . ID=gene-LIO31_RS02125;Name=LIO31_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02125 NZ_CP085086.1 Protein Homology CDS 413687 414409 . + 0 ID=cds-WP_024405569.1;Parent=gene-LIO31_RS02125;Dbxref=Genbank:WP_024405569.1;Name=WP_024405569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647235.1;locus_tag=LIO31_RS02125;product=hypothetical protein;protein_id=WP_024405569.1;transl_table=11 NZ_CP085086.1 RefSeq gene 414719 415258 . + . ID=gene-LIO31_RS02130;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LIO31_RS02130 NZ_CP085086.1 Protein Homology CDS 414719 415258 . + 0 ID=cds-WP_014638485.1;Parent=gene-LIO31_RS02130;Dbxref=Genbank:WP_014638485.1;Name=WP_014638485.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638485.1;locus_tag=LIO31_RS02130;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_014638485.1;transl_table=11 NZ_CP085086.1 RefSeq gene 415248 415736 . + . ID=gene-LIO31_RS02135;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LIO31_RS02135 NZ_CP085086.1 Protein Homology CDS 415248 415736 . + 0 ID=cds-WP_002939048.1;Parent=gene-LIO31_RS02135;Dbxref=Genbank:WP_002939048.1;Name=WP_002939048.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027597.1;locus_tag=LIO31_RS02135;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_002939048.1;transl_table=11 NZ_CP085086.1 RefSeq gene 415723 416772 . + . ID=gene-LIO31_RS02140;Name=LIO31_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02140 NZ_CP085086.1 Protein Homology CDS 415723 416772 . + 0 ID=cds-WP_012775295.1;Parent=gene-LIO31_RS02140;Dbxref=Genbank:WP_012775295.1;Name=WP_012775295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736227.1;locus_tag=LIO31_RS02140;product=PDZ domain-containing protein;protein_id=WP_012775295.1;transl_table=11 NZ_CP085086.1 RefSeq gene 416960 417601 . + . ID=gene-LIO31_RS02145;Name=LIO31_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02145 NZ_CP085086.1 Protein Homology CDS 416960 417601 . + 0 ID=cds-WP_024382386.1;Parent=gene-LIO31_RS02145;Dbxref=Genbank:WP_024382386.1;Name=WP_024382386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638483.1;locus_tag=LIO31_RS02145;product=DUF1027 domain-containing protein;protein_id=WP_024382386.1;transl_table=11 NZ_CP085086.1 RefSeq gene 417610 418722 . + . ID=gene-LIO31_RS02150;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LIO31_RS02150 NZ_CP085086.1 Protein Homology CDS 417610 418722 . + 0 ID=cds-WP_012028433.1;Parent=gene-LIO31_RS02150;Dbxref=Genbank:WP_012028433.1;Name=WP_012028433.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028433.1;locus_tag=LIO31_RS02150;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_012028433.1;transl_table=11 NZ_CP085086.1 RefSeq gene 418719 419246 . + . ID=gene-LIO31_RS02155;Name=LIO31_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02155 NZ_CP085086.1 Protein Homology CDS 418719 419246 . + 0 ID=cds-WP_012027591.1;Parent=gene-LIO31_RS02155;Dbxref=Genbank:WP_012027591.1;Name=WP_012027591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194600.1;locus_tag=LIO31_RS02155;product=VanZ family protein;protein_id=WP_012027591.1;transl_table=11 NZ_CP085086.1 RefSeq gene 420542 421366 . - . ID=gene-LIO31_RS02160;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LIO31_RS02160 NZ_CP085086.1 Protein Homology CDS 420542 421366 . - 0 ID=cds-WP_004194617.1;Parent=gene-LIO31_RS02160;Dbxref=Genbank:WP_004194617.1;Name=WP_004194617.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058066.1;locus_tag=LIO31_RS02160;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_004194617.1;transl_table=11 NZ_CP085086.1 RefSeq gene 421379 422839 . - . ID=gene-LIO31_RS02165;Name=LIO31_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02165 NZ_CP085086.1 Protein Homology CDS 421379 422839 . - 0 ID=cds-WP_012027590.1;Parent=gene-LIO31_RS02165;Dbxref=Genbank:WP_012027590.1;Name=WP_012027590.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638479.1;locus_tag=LIO31_RS02165;product=nicotinate phosphoribosyltransferase;protein_id=WP_012027590.1;transl_table=11 NZ_CP085086.1 RefSeq gene 422947 423591 . - . ID=gene-LIO31_RS02170;Name=LIO31_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02170 NZ_CP085086.1 Protein Homology CDS 422947 423591 . - 0 ID=cds-WP_012027589.1;Parent=gene-LIO31_RS02170;Dbxref=Genbank:WP_012027589.1;Name=WP_012027589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917297.1;locus_tag=LIO31_RS02170;product=A24 family peptidase;protein_id=WP_012027589.1;transl_table=11 NZ_CP085086.1 RefSeq gene 423713 424267 . + . ID=gene-LIO31_RS02175;Name=LIO31_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02175 NZ_CP085086.1 Protein Homology CDS 423713 424267 . + 0 ID=cds-WP_004194627.1;Parent=gene-LIO31_RS02175;Dbxref=Genbank:WP_004194627.1;Name=WP_004194627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194627.1;locus_tag=LIO31_RS02175;product=class I SAM-dependent methyltransferase;protein_id=WP_004194627.1;transl_table=11 NZ_CP085086.1 RefSeq gene 424283 425062 . - . ID=gene-LIO31_RS02180;Name=LIO31_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02180 NZ_CP085086.1 Protein Homology CDS 424283 425062 . - 0 ID=cds-WP_012027588.1;Parent=gene-LIO31_RS02180;Dbxref=Genbank:WP_012027588.1;Name=WP_012027588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027588.1;locus_tag=LIO31_RS02180;product=ABC transporter ATP-binding protein;protein_id=WP_012027588.1;transl_table=11 NZ_CP085086.1 RefSeq gene 425195 426532 . + . ID=gene-LIO31_RS02185;Name=LIO31_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02185 NZ_CP085086.1 Protein Homology CDS 425195 426532 . + 0 ID=cds-WP_074389850.1;Parent=gene-LIO31_RS02185;Dbxref=Genbank:WP_074389850.1;Name=WP_074389850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194632.1;locus_tag=LIO31_RS02185;product=hemolysin family protein;protein_id=WP_074389850.1;transl_table=11 NZ_CP085086.1 RefSeq gene 426653 427444 . + . ID=gene-LIO31_RS02190;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=LIO31_RS02190 NZ_CP085086.1 Protein Homology CDS 426653 427444 . + 0 ID=cds-WP_012027587.1;Parent=gene-LIO31_RS02190;Dbxref=Genbank:WP_012027587.1;Name=WP_012027587.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637120.1;locus_tag=LIO31_RS02190;product=pyruvate formate-lyase-activating protein;protein_id=WP_012027587.1;transl_table=11 NZ_CP085086.1 RefSeq gene 427554 429251 . - . ID=gene-LIO31_RS02195;Name=LIO31_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02195 NZ_CP085086.1 Protein Homology CDS 427554 429251 . - 0 ID=cds-WP_024385944.1;Parent=gene-LIO31_RS02195;Dbxref=Genbank:WP_024385944.1;Name=WP_024385944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637119.1;locus_tag=LIO31_RS02195;product=M3 family oligoendopeptidase;protein_id=WP_024385944.1;transl_table=11 NZ_CP085086.1 RefSeq gene 429389 430324 . + . ID=gene-LIO31_RS02200;Name=LIO31_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02200 NZ_CP085086.1 Protein Homology CDS 429389 430324 . + 0 ID=cds-WP_012027585.1;Parent=gene-LIO31_RS02200;Dbxref=Genbank:WP_012027585.1;Name=WP_012027585.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027585.1;locus_tag=LIO31_RS02200;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_012027585.1;transl_table=11 NZ_CP085086.1 RefSeq gene 431374 431991 . + . ID=gene-LIO31_RS02205;Name=LIO31_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02205 NZ_CP085086.1 GeneMarkS-2+ CDS 431374 431991 . + 0 ID=cds-WP_226319107.1;Parent=gene-LIO31_RS02205;Dbxref=Genbank:WP_226319107.1;Name=WP_226319107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS02205;product=hypothetical protein;protein_id=WP_226319107.1;transl_table=11 NZ_CP085086.1 RefSeq gene 431984 434497 . + . ID=gene-LIO31_RS02210;Name=LIO31_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02210 NZ_CP085086.1 Protein Homology CDS 431984 434497 . + 0 ID=cds-WP_226960919.1;Parent=gene-LIO31_RS02210;Dbxref=Genbank:WP_226960919.1;Name=WP_226960919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027583.1;locus_tag=LIO31_RS02210;product=serum opacification factor;protein_id=WP_226960919.1;transl_table=11 NZ_CP085086.1 RefSeq gene 434963 435664 . - . ID=gene-LIO31_RS02215;Name=LIO31_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02215 NZ_CP085086.1 Protein Homology CDS 434963 435664 . - 0 ID=cds-WP_023371214.1;Parent=gene-LIO31_RS02215;Dbxref=Genbank:WP_023371214.1;Name=WP_023371214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028427.1;locus_tag=LIO31_RS02215;product=CPBP family intramembrane metalloprotease;protein_id=WP_023371214.1;transl_table=11 NZ_CP085086.1 RefSeq gene 435896 436546 . + . ID=gene-LIO31_RS02220;Name=LIO31_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02220 NZ_CP085086.1 Protein Homology CDS 435896 436546 . + 0 ID=cds-WP_023371212.1;Parent=gene-LIO31_RS02220;Dbxref=Genbank:WP_023371212.1;Name=WP_023371212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936279.1;locus_tag=LIO31_RS02220;product=response regulator transcription factor;protein_id=WP_023371212.1;transl_table=11 NZ_CP085086.1 RefSeq gene 436548 437936 . + . ID=gene-LIO31_RS02225;Name=LIO31_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02225 NZ_CP085086.1 Protein Homology CDS 436548 437936 . + 0 ID=cds-WP_023371210.1;Parent=gene-LIO31_RS02225;Dbxref=Genbank:WP_023371210.1;Name=WP_023371210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647210.1;locus_tag=LIO31_RS02225;product=HAMP domain-containing histidine kinase;protein_id=WP_023371210.1;transl_table=11 NZ_CP085086.1 RefSeq gene 438378 438929 . + . ID=gene-LIO31_RS02230;Name=LIO31_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02230 NZ_CP085086.1 Protein Homology CDS 438378 438929 . + 0 ID=cds-WP_023371208.1;Parent=gene-LIO31_RS02230;Dbxref=Genbank:WP_023371208.1;Name=WP_023371208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775293.1;locus_tag=LIO31_RS02230;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_023371208.1;transl_table=11 NZ_CP085086.1 RefSeq gene 439138 440046 . - . ID=gene-LIO31_RS02235;Name=LIO31_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02235 NZ_CP085086.1 Protein Homology CDS 439138 440046 . - 0 ID=cds-WP_002936272.1;Parent=gene-LIO31_RS02235;Dbxref=Genbank:WP_002936272.1;Name=WP_002936272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917295.1;locus_tag=LIO31_RS02235;product=zinc metallopeptidase;protein_id=WP_002936272.1;transl_table=11 NZ_CP085086.1 RefSeq gene 440213 441556 . + . ID=gene-LIO31_RS02240;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LIO31_RS02240 NZ_CP085086.1 Protein Homology CDS 440213 441556 . + 0 ID=cds-WP_023371206.1;Parent=gene-LIO31_RS02240;Dbxref=Genbank:WP_023371206.1;Name=WP_023371206.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730498.1;locus_tag=LIO31_RS02240;product=exodeoxyribonuclease VII large subunit;protein_id=WP_023371206.1;transl_table=11 NZ_CP085086.1 RefSeq gene 441531 441746 . + . ID=gene-LIO31_RS02245;Name=LIO31_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02245 NZ_CP085086.1 Protein Homology CDS 441531 441746 . + 0 ID=cds-WP_002936269.1;Parent=gene-LIO31_RS02245;Dbxref=Genbank:WP_002936269.1;Name=WP_002936269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910558.1;locus_tag=LIO31_RS02245;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002936269.1;transl_table=11 NZ_CP085086.1 RefSeq gene 441746 442615 . + . ID=gene-LIO31_RS02250;Name=LIO31_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02250 NZ_CP085086.1 Protein Homology CDS 441746 442615 . + 0 ID=cds-WP_024405564.1;Parent=gene-LIO31_RS02250;Dbxref=Genbank:WP_024405564.1;Name=WP_024405564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936266.1;locus_tag=LIO31_RS02250;product=polyprenyl synthetase family protein;protein_id=WP_024405564.1;transl_table=11 NZ_CP085086.1 RefSeq gene 442608 443429 . + . ID=gene-LIO31_RS02255;Name=LIO31_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02255 NZ_CP085086.1 Protein Homology CDS 442608 443429 . + 0 ID=cds-WP_024405563.1;Parent=gene-LIO31_RS02255;Dbxref=Genbank:WP_024405563.1;Name=WP_024405563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647205.1;locus_tag=LIO31_RS02255;product=TlyA family RNA methyltransferase;protein_id=WP_024405563.1;transl_table=11 NZ_CP085086.1 RefSeq gene 443422 443847 . + . ID=gene-LIO31_RS02260;Name=LIO31_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02260 NZ_CP085086.1 Protein Homology CDS 443422 443847 . + 0 ID=cds-WP_002936261.1;Parent=gene-LIO31_RS02260;Dbxref=Genbank:WP_002936261.1;Name=WP_002936261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936261.1;locus_tag=LIO31_RS02260;product=arginine repressor;protein_id=WP_002936261.1;transl_table=11 NZ_CP085086.1 RefSeq gene 443850 445511 . + . ID=gene-LIO31_RS02265;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LIO31_RS02265 NZ_CP085086.1 Protein Homology CDS 443850 445511 . + 0 ID=cds-WP_024405562.1;Parent=gene-LIO31_RS02265;Dbxref=Genbank:WP_024405562.1;Name=WP_024405562.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942943.1;locus_tag=LIO31_RS02265;product=DNA repair protein RecN;protein_id=WP_024405562.1;transl_table=11 NZ_CP085086.1 RefSeq gene 445605 446438 . + . ID=gene-LIO31_RS02270;Name=LIO31_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02270 NZ_CP085086.1 Protein Homology CDS 445605 446438 . + 0 ID=cds-WP_024405561.1;Parent=gene-LIO31_RS02270;Dbxref=Genbank:WP_024405561.1;Name=WP_024405561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027572.1;locus_tag=LIO31_RS02270;product=DegV family protein;protein_id=WP_024405561.1;transl_table=11 NZ_CP085086.1 RefSeq gene 446431 447264 . + . ID=gene-LIO31_RS02275;Name=LIO31_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02275 NZ_CP085086.1 Protein Homology CDS 446431 447264 . + 0 ID=cds-WP_002936251.1;Parent=gene-LIO31_RS02275;Dbxref=Genbank:WP_002936251.1;Name=WP_002936251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917294.1;locus_tag=LIO31_RS02275;product=SGNH/GDSL hydrolase family protein;protein_id=WP_002936251.1;transl_table=11 NZ_CP085086.1 RefSeq gene 447236 447832 . + . ID=gene-LIO31_RS02280;Name=LIO31_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02280 NZ_CP085086.1 Protein Homology CDS 447236 447832 . + 0 ID=cds-WP_002936249.1;Parent=gene-LIO31_RS02280;Dbxref=Genbank:WP_002936249.1;Name=WP_002936249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942951.1;locus_tag=LIO31_RS02280;product=YpmS family protein;protein_id=WP_002936249.1;transl_table=11 NZ_CP085086.1 RefSeq gene 447922 448197 . + . ID=gene-LIO31_RS02285;Name=LIO31_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02285 NZ_CP085086.1 Protein Homology CDS 447922 448197 . + 0 ID=cds-WP_002936247.1;Parent=gene-LIO31_RS02285;Dbxref=Genbank:WP_002936247.1;Name=WP_002936247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950996.1;locus_tag=LIO31_RS02285;product=HU family DNA-binding protein;protein_id=WP_002936247.1;transl_table=11 NZ_CP085086.1 RefSeq gene 448599 449066 . + . ID=gene-LIO31_RS02290;Name=LIO31_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02290 NZ_CP085086.1 Protein Homology CDS 448599 449066 . + 0 ID=cds-WP_024402670.1;Parent=gene-LIO31_RS02290;Dbxref=Genbank:WP_024402670.1;Name=WP_024402670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638437.1;locus_tag=LIO31_RS02290;product=GNAT family N-acetyltransferase;protein_id=WP_024402670.1;transl_table=11 NZ_CP085086.1 RefSeq gene 449088 450347 . - . ID=gene-LIO31_RS02295;Name=LIO31_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02295 NZ_CP085086.1 Protein Homology CDS 449088 450347 . - 0 ID=cds-WP_074389851.1;Parent=gene-LIO31_RS02295;Dbxref=Genbank:WP_074389851.1;Name=WP_074389851.1;Ontology_term=GO:0016054,GO:0004420;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA;go_process=organic acid catabolic process|0016054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910548.1;locus_tag=LIO31_RS02295;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_074389851.1;transl_table=11 NZ_CP085086.1 RefSeq gene 450408 451562 . - . ID=gene-LIO31_RS02300;Name=LIO31_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02300 NZ_CP085086.1 Protein Homology CDS 450408 451562 . - 0 ID=cds-WP_024405560.1;Parent=gene-LIO31_RS02300;Dbxref=Genbank:WP_024405560.1;Name=WP_024405560.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647199.1;locus_tag=LIO31_RS02300;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_024405560.1;transl_table=11 NZ_CP085086.1 RefSeq gene 451591 452775 . - . ID=gene-LIO31_RS02305;Name=LIO31_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02305 NZ_CP085086.1 Protein Homology CDS 451591 452775 . - 0 ID=cds-WP_024405559.1;Parent=gene-LIO31_RS02305;Dbxref=Genbank:WP_024405559.1;Name=WP_024405559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942924.1;locus_tag=LIO31_RS02305;product=acetyl-CoA C-acetyltransferase;protein_id=WP_024405559.1;transl_table=11 NZ_CP085086.1 RefSeq gene 453001 453693 . + . ID=gene-LIO31_RS02310;Name=LIO31_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02310 NZ_CP085086.1 Protein Homology CDS 453001 453693 . + 0 ID=cds-WP_002936226.1;Parent=gene-LIO31_RS02310;Dbxref=Genbank:WP_002936226.1;Name=WP_002936226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936226.1;locus_tag=LIO31_RS02310;product=phosphoglycerate mutase;protein_id=WP_002936226.1;transl_table=11 NZ_CP085086.1 RefSeq gene 453794 454177 . + . ID=gene-LIO31_RS02315;Name=LIO31_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02315 NZ_CP085086.1 Protein Homology CDS 453794 454177 . + 0 ID=cds-WP_024405557.1;Parent=gene-LIO31_RS02315;Dbxref=Genbank:WP_024405557.1;Name=WP_024405557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637111.1;locus_tag=LIO31_RS02315;product=VOC family protein;protein_id=WP_024405557.1;transl_table=11 NZ_CP085086.1 RefSeq gene 454469 455866 . + . ID=gene-LIO31_RS02320;Name=LIO31_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02320 NZ_CP085086.1 Protein Homology CDS 454469 455866 . + 0 ID=cds-WP_024405556.1;Parent=gene-LIO31_RS02320;Dbxref=Genbank:WP_024405556.1;Name=WP_024405556.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647196.1;locus_tag=LIO31_RS02320;product=polysaccharide deacetylase family protein;protein_id=WP_024405556.1;transl_table=11 NZ_CP085086.1 RefSeq gene 455933 457015 . - . ID=gene-LIO31_RS02325;Name=LIO31_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02325 NZ_CP085086.1 Protein Homology CDS 455933 457015 . - 0 ID=cds-WP_002936220.1;Parent=gene-LIO31_RS02325;Dbxref=Genbank:WP_002936220.1;Name=WP_002936220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027557.1;locus_tag=LIO31_RS02325;product=DEAD/DEAH box helicase;protein_id=WP_002936220.1;transl_table=11 NZ_CP085086.1 RefSeq gene 457005 457991 . - . ID=gene-LIO31_RS02330;Name=LIO31_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02330 NZ_CP085086.1 Protein Homology CDS 457005 457991 . - 0 ID=cds-WP_074389852.1;Parent=gene-LIO31_RS02330;Dbxref=Genbank:WP_074389852.1;Name=WP_074389852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936219.1;locus_tag=LIO31_RS02330;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_074389852.1;transl_table=11 NZ_CP085086.1 RefSeq gene 458074 458703 . + . ID=gene-LIO31_RS02335;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LIO31_RS02335 NZ_CP085086.1 Protein Homology CDS 458074 458703 . + 0 ID=cds-WP_002936217.1;Parent=gene-LIO31_RS02335;Dbxref=Genbank:WP_002936217.1;Name=WP_002936217.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936217.1;locus_tag=LIO31_RS02335;product=uridine kinase;protein_id=WP_002936217.1;transl_table=11 NZ_CP085086.1 RefSeq gene 458705 459244 . + . ID=gene-LIO31_RS02340;Name=LIO31_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02340 NZ_CP085086.1 Protein Homology CDS 458705 459244 . + 0 ID=cds-WP_014638430.1;Parent=gene-LIO31_RS02340;Dbxref=Genbank:WP_014638430.1;Name=WP_014638430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775286.1;locus_tag=LIO31_RS02340;product=PadR family transcriptional regulator;protein_id=WP_014638430.1;transl_table=11 NZ_CP085086.1 RefSeq gene 459331 459600 . + . ID=gene-LIO31_RS02345;Name=LIO31_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02345 NZ_CP085086.1 Protein Homology CDS 459331 459600 . + 0 ID=cds-WP_002940218.1;Parent=gene-LIO31_RS02345;Dbxref=Genbank:WP_002940218.1;Name=WP_002940218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940218.1;locus_tag=LIO31_RS02345;product=DUF1294 domain-containing protein;protein_id=WP_002940218.1;transl_table=11 NZ_CP085086.1 RefSeq gene 459665 460162 . + . ID=gene-LIO31_RS02350;Name=LIO31_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02350 NZ_CP085086.1 Protein Homology CDS 459665 460162 . + 0 ID=cds-WP_074389484.1;Parent=gene-LIO31_RS02350;Dbxref=Genbank:WP_074389484.1;Name=WP_074389484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028416.1;locus_tag=LIO31_RS02350;product=GAF domain-containing protein;protein_id=WP_074389484.1;transl_table=11 NZ_CP085086.1 RefSeq gene 460162 461829 . + . ID=gene-LIO31_RS02355;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LIO31_RS02355 NZ_CP085086.1 Protein Homology CDS 460162 461829 . + 0 ID=cds-WP_074389853.1;Parent=gene-LIO31_RS02355;Dbxref=Genbank:WP_074389853.1;Name=WP_074389853.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895702.1;locus_tag=LIO31_RS02355;product=DNA polymerase III subunit gamma/tau;protein_id=WP_074389853.1;transl_table=11 NZ_CP085086.1 RefSeq gene 462024 462212 . + . ID=gene-LIO31_RS02360;Name=LIO31_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02360 NZ_CP085086.1 Protein Homology CDS 462024 462212 . + 0 ID=cds-WP_002936839.1;Parent=gene-LIO31_RS02360;Dbxref=Genbank:WP_002936839.1;Name=WP_002936839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936839.1;locus_tag=LIO31_RS02360;product=DUF3272 domain-containing protein;protein_id=WP_002936839.1;transl_table=11 NZ_CP085086.1 RefSeq gene 462178 463134 . - . ID=gene-LIO31_RS02365;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LIO31_RS02365 NZ_CP085086.1 Protein Homology CDS 462178 463134 . - 0 ID=cds-WP_024382844.1;Parent=gene-LIO31_RS02365;Dbxref=Genbank:WP_024382844.1;Name=WP_024382844.1;gbkey=CDS;gene=birA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775667.1;locus_tag=LIO31_RS02365;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_024382844.1;transl_table=11 NZ_CP085086.1 RefSeq gene 463199 464233 . + . ID=gene-LIO31_RS02370;Name=LIO31_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02370 NZ_CP085086.1 Protein Homology CDS 463199 464233 . + 0 ID=cds-WP_024405472.1;Parent=gene-LIO31_RS02370;Dbxref=Genbank:WP_024405472.1;Name=WP_024405472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027549.1;locus_tag=LIO31_RS02370;product=M42 family metallopeptidase;protein_id=WP_024405472.1;transl_table=11 NZ_CP085086.1 RefSeq gene 464235 464972 . + . ID=gene-LIO31_RS02375;Name=LIO31_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02375 NZ_CP085086.1 Protein Homology CDS 464235 464972 . + 0 ID=cds-WP_015647191.1;Parent=gene-LIO31_RS02375;Dbxref=Genbank:WP_015647191.1;Name=WP_015647191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647191.1;locus_tag=LIO31_RS02375;product=hypothetical protein;protein_id=WP_015647191.1;transl_table=11 NZ_CP085086.1 RefSeq gene 464991 465458 . + . ID=gene-LIO31_RS02380;Name=LIO31_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02380 NZ_CP085086.1 Protein Homology CDS 464991 465458 . + 0 ID=cds-WP_024405473.1;Parent=gene-LIO31_RS02380;Dbxref=Genbank:WP_024405473.1;Name=WP_024405473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002924064.1;locus_tag=LIO31_RS02380;product=cytidine/deoxycytidylate deaminase family protein;protein_id=WP_024405473.1;transl_table=11 NZ_CP085086.1 RefSeq gene 466049 467239 . + . ID=gene-LIO31_RS02385;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LIO31_RS02385 NZ_CP085086.1 Protein Homology CDS 466049 467239 . + 0 ID=cds-WP_024382839.1;Parent=gene-LIO31_RS02385;Dbxref=Genbank:WP_024382839.1;Name=WP_024382839.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837180.1;locus_tag=LIO31_RS02385;product=methionine adenosyltransferase;protein_id=WP_024382839.1;transl_table=11 NZ_CP085086.1 RefSeq gene 467371 468204 . + . ID=gene-LIO31_RS02390;Name=LIO31_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02390 NZ_CP085086.1 Protein Homology CDS 467371 468204 . + 0 ID=cds-WP_074389490.1;Parent=gene-LIO31_RS02390;Dbxref=Genbank:WP_074389490.1;Name=WP_074389490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000283.1;locus_tag=LIO31_RS02390;product=AraC family transcriptional regulator;protein_id=WP_074389490.1;transl_table=11 NZ_CP085086.1 RefSeq gene 468222 469175 . + . ID=gene-LIO31_RS02395;Name=LIO31_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02395 NZ_CP085086.1 Protein Homology CDS 468222 469175 . + 0 ID=cds-WP_024405475.1;Parent=gene-LIO31_RS02395;Dbxref=Genbank:WP_024405475.1;Name=WP_024405475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018167051.1;locus_tag=LIO31_RS02395;product=hypothetical protein;protein_id=WP_024405475.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 469216 469488 . - . ID=gene-LIO31_RS02400;Name=LIO31_RS02400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS02400;pseudo=true NZ_CP085086.1 Protein Homology CDS 469216 469488 . - 0 ID=cds-LIO31_RS02400;Parent=gene-LIO31_RS02400;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380948.1;locus_tag=LIO31_RS02400;product=YiaA/YiaB family inner membrane protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 469727 470986 . + . ID=gene-LIO31_RS02405;Name=LIO31_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02405 NZ_CP085086.1 Protein Homology CDS 469727 470986 . + 0 ID=cds-WP_012775282.1;Parent=gene-LIO31_RS02405;Dbxref=Genbank:WP_012775282.1;Name=WP_012775282.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226236.1;locus_tag=LIO31_RS02405;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_012775282.1;transl_table=11 NZ_CP085086.1 RefSeq gene 471083 471655 . + . ID=gene-LIO31_RS02410;Name=LIO31_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02410 NZ_CP085086.1 Protein Homology CDS 471083 471655 . + 0 ID=cds-WP_024405476.1;Parent=gene-LIO31_RS02410;Dbxref=Genbank:WP_024405476.1;Name=WP_024405476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647187.1;locus_tag=LIO31_RS02410;product=GNAT family N-acetyltransferase;protein_id=WP_024405476.1;transl_table=11 NZ_CP085086.1 RefSeq gene 471652 472512 . + . ID=gene-LIO31_RS02415;Name=LIO31_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02415 NZ_CP085086.1 Protein Homology CDS 471652 472512 . + 0 ID=cds-WP_002936813.1;Parent=gene-LIO31_RS02415;Dbxref=Genbank:WP_002936813.1;Name=WP_002936813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013903404.1;locus_tag=LIO31_RS02415;product=methionyl aminopeptidase;protein_id=WP_002936813.1;transl_table=11 NZ_CP085086.1 RefSeq gene 472560 473483 . + . ID=gene-LIO31_RS02420;Name=LIO31_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02420 NZ_CP085086.1 Protein Homology CDS 472560 473483 . + 0 ID=cds-WP_024376735.1;Parent=gene-LIO31_RS02420;Dbxref=Genbank:WP_024376735.1;Name=WP_024376735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638420.1;locus_tag=LIO31_RS02420;product=YihY/virulence factor BrkB family protein;protein_id=WP_024376735.1;transl_table=11 NZ_CP085086.1 RefSeq gene 473530 473967 . - . ID=gene-LIO31_RS02425;Name=LIO31_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02425 NZ_CP085086.1 Protein Homology CDS 473530 473967 . - 0 ID=cds-WP_024405477.1;Parent=gene-LIO31_RS02425;Dbxref=Genbank:WP_024405477.1;Name=WP_024405477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647185.1;locus_tag=LIO31_RS02425;product=GtrA family protein;protein_id=WP_024405477.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 473996 474098 . + . ID=id-NZ_CP085086.1:473996..474098;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 474096 474611 . + . ID=gene-LIO31_RS02430;Name=LIO31_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02430 NZ_CP085086.1 Protein Homology CDS 474096 474611 . + 0 ID=cds-WP_012027540.1;Parent=gene-LIO31_RS02430;Dbxref=Genbank:WP_012027540.1;Name=WP_012027540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027540.1;locus_tag=LIO31_RS02430;product=QueT transporter family protein;protein_id=WP_012027540.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 474727 475561 . + . ID=gene-LIO31_RS02435;Name=LIO31_RS02435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS02435;pseudo=true NZ_CP085086.1 Protein Homology CDS 474727 475561 . + 0 ID=cds-LIO31_RS02435;Parent=gene-LIO31_RS02435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638418.1;locus_tag=LIO31_RS02435;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 475643 477799 . + . ID=gene-LIO31_RS02440;Name=LIO31_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02440 NZ_CP085086.1 Protein Homology CDS 475643 477799 . + 0 ID=cds-WP_074389855.1;Parent=gene-LIO31_RS02440;Dbxref=Genbank:WP_074389855.1;Name=WP_074389855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194797.1;locus_tag=LIO31_RS02440;product=RNA-binding transcriptional accessory protein;protein_id=WP_074389855.1;transl_table=11 NZ_CP085086.1 RefSeq gene 477786 478220 . + . ID=gene-LIO31_RS02445;Name=LIO31_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02445 NZ_CP085086.1 Protein Homology CDS 477786 478220 . + 0 ID=cds-WP_024405478.1;Parent=gene-LIO31_RS02445;Dbxref=Genbank:WP_024405478.1;Name=WP_024405478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194799.1;locus_tag=LIO31_RS02445;product=SprT family protein;protein_id=WP_024405478.1;transl_table=11 NZ_CP085086.1 RefSeq gene 478290 479051 . + . ID=gene-LIO31_RS02450;Name=LIO31_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02450 NZ_CP085086.1 Protein Homology CDS 478290 479051 . + 0 ID=cds-WP_015647182.1;Parent=gene-LIO31_RS02450;Dbxref=Genbank:WP_015647182.1;Name=WP_015647182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936777.1;locus_tag=LIO31_RS02450;product=hypothetical protein;protein_id=WP_015647182.1;transl_table=11 NZ_CP085086.1 RefSeq gene 479041 479313 . + . ID=gene-LIO31_RS02455;Name=LIO31_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02455 NZ_CP085086.1 Protein Homology CDS 479041 479313 . + 0 ID=cds-WP_002936774.1;Parent=gene-LIO31_RS02455;Dbxref=Genbank:WP_002936774.1;Name=WP_002936774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730476.1;locus_tag=LIO31_RS02455;product=PspC domain-containing protein;protein_id=WP_002936774.1;transl_table=11 NZ_CP085086.1 RefSeq gene 479460 480401 . - . ID=gene-LIO31_RS02460;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=LIO31_RS02460 NZ_CP085086.1 Protein Homology CDS 479460 480401 . - 0 ID=cds-WP_024386433.1;Parent=gene-LIO31_RS02460;Dbxref=Genbank:WP_024386433.1;Name=WP_024386433.1;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736189.1;locus_tag=LIO31_RS02460;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_024386433.1;transl_table=11 NZ_CP085086.1 RefSeq gene 480618 481550 . + . ID=gene-LIO31_RS02465;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LIO31_RS02465 NZ_CP085086.1 Protein Homology CDS 480618 481550 . + 0 ID=cds-WP_024386434.1;Parent=gene-LIO31_RS02465;Dbxref=Genbank:WP_024386434.1;Name=WP_024386434.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194807.1;locus_tag=LIO31_RS02465;product=HPr(Ser) kinase/phosphatase;protein_id=WP_024386434.1;transl_table=11 NZ_CP085086.1 RefSeq gene 481552 482328 . + . ID=gene-LIO31_RS02470;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LIO31_RS02470 NZ_CP085086.1 Protein Homology CDS 481552 482328 . + 0 ID=cds-WP_024386435.1;Parent=gene-LIO31_RS02470;Dbxref=Genbank:WP_024386435.1;Name=WP_024386435.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638410.1;locus_tag=LIO31_RS02470;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_024386435.1;transl_table=11 NZ_CP085086.1 RefSeq gene 482339 482752 . + . ID=gene-LIO31_RS02475;Name=LIO31_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02475 NZ_CP085086.1 Protein Homology CDS 482339 482752 . + 0 ID=cds-WP_074389146.1;Parent=gene-LIO31_RS02475;Dbxref=Genbank:WP_074389146.1;Name=WP_074389146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194811.1;locus_tag=LIO31_RS02475;product=DUF948 domain-containing protein;protein_id=WP_074389146.1;transl_table=11 NZ_CP085086.1 RefSeq gene 482736 483272 . + . ID=gene-LIO31_RS02480;Name=LIO31_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02480 NZ_CP085086.1 Protein Homology CDS 482736 483272 . + 0 ID=cds-WP_024386437.1;Parent=gene-LIO31_RS02480;Dbxref=Genbank:WP_024386437.1;Name=WP_024386437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638409.1;locus_tag=LIO31_RS02480;product=YtxH domain-containing protein;protein_id=WP_024386437.1;transl_table=11 NZ_CP085086.1 RefSeq gene 483583 484032 . + . ID=gene-LIO31_RS02485;Name=LIO31_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02485 NZ_CP085086.1 Protein Homology CDS 483583 484032 . + 0 ID=cds-WP_024386438.1;Parent=gene-LIO31_RS02485;Dbxref=Genbank:WP_024386438.1;Name=WP_024386438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936751.1;locus_tag=LIO31_RS02485;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_024386438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 484025 484756 . + . ID=gene-LIO31_RS02490;Name=LIO31_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02490 NZ_CP085086.1 Protein Homology CDS 484025 484756 . + 0 ID=cds-WP_024386439.1;Parent=gene-LIO31_RS02490;Dbxref=Genbank:WP_024386439.1;Name=WP_024386439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775278.1;locus_tag=LIO31_RS02490;product=ABC transporter ATP-binding protein;protein_id=WP_024386439.1;transl_table=11 NZ_CP085086.1 RefSeq gene 484756 486267 . + . ID=gene-LIO31_RS02495;Name=LIO31_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02495 NZ_CP085086.1 Protein Homology CDS 484756 486267 . + 0 ID=cds-WP_024405480.1;Parent=gene-LIO31_RS02495;Dbxref=Genbank:WP_024405480.1;Name=WP_024405480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936744.1;locus_tag=LIO31_RS02495;product=ABC transporter permease/substrate-binding protein;protein_id=WP_024405480.1;transl_table=11 NZ_CP085086.1 RefSeq gene 486357 487418 . + . ID=gene-LIO31_RS02500;Name=LIO31_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02500 NZ_CP085086.1 Protein Homology CDS 486357 487418 . + 0 ID=cds-WP_024405481.1;Parent=gene-LIO31_RS02500;Dbxref=Genbank:WP_024405481.1;Name=WP_024405481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010742065.1;locus_tag=LIO31_RS02500;product=trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_024405481.1;transl_table=11 NZ_CP085086.1 RefSeq gene 487428 488189 . + . ID=gene-LIO31_RS02505;Name=LIO31_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02505 NZ_CP085086.1 Protein Homology CDS 487428 488189 . + 0 ID=cds-WP_226960920.1;Parent=gene-LIO31_RS02505;Dbxref=Genbank:WP_226960920.1;Name=WP_226960920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043863.1;locus_tag=LIO31_RS02505;product=nuclear transport factor 2 family protein;protein_id=WP_226960920.1;transl_table=11 NZ_CP085086.1 RefSeq gene 488337 489461 . + . ID=gene-LIO31_RS02510;Name=LIO31_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02510 NZ_CP085086.1 Protein Homology CDS 488337 489461 . + 0 ID=cds-WP_074389856.1;Parent=gene-LIO31_RS02510;Dbxref=Genbank:WP_074389856.1;Name=WP_074389856.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936741.1;locus_tag=LIO31_RS02510;product=aminotransferase;protein_id=WP_074389856.1;transl_table=11 NZ_CP085086.1 RefSeq gene 489476 490645 . - . ID=gene-LIO31_RS02515;Name=LIO31_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02515 NZ_CP085086.1 Protein Homology CDS 489476 490645 . - 0 ID=cds-WP_074389144.1;Parent=gene-LIO31_RS02515;Dbxref=Genbank:WP_074389144.1;Name=WP_074389144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027526.1;locus_tag=LIO31_RS02515;product=DUF2974 domain-containing protein;protein_id=WP_074389144.1;transl_table=11 NZ_CP085086.1 RefSeq gene 490815 491498 . + . ID=gene-LIO31_RS02520;Name=LIO31_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02520 NZ_CP085086.1 Protein Homology CDS 490815 491498 . + 0 ID=cds-WP_024405741.1;Parent=gene-LIO31_RS02520;Dbxref=Genbank:WP_024405741.1;Name=WP_024405741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647173.1;locus_tag=LIO31_RS02520;product=response regulator transcription factor;protein_id=WP_024405741.1;transl_table=11 NZ_CP085086.1 RefSeq gene 491491 492483 . + . ID=gene-LIO31_RS02525;Name=LIO31_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02525 NZ_CP085086.1 Protein Homology CDS 491491 492483 . + 0 ID=cds-WP_024405740.1;Parent=gene-LIO31_RS02525;Dbxref=Genbank:WP_024405740.1;Name=WP_024405740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936726.1;locus_tag=LIO31_RS02525;product=sensor histidine kinase;protein_id=WP_024405740.1;transl_table=11 NZ_CP085086.1 RefSeq gene 492579 493337 . + . ID=gene-LIO31_RS02530;Name=LIO31_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02530 NZ_CP085086.1 Protein Homology CDS 492579 493337 . + 0 ID=cds-WP_024405739.1;Parent=gene-LIO31_RS02530;Dbxref=Genbank:WP_024405739.1;Name=WP_024405739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194830.1;locus_tag=LIO31_RS02530;product=ABC transporter ATP-binding protein;protein_id=WP_024405739.1;transl_table=11 NZ_CP085086.1 RefSeq gene 493339 495351 . + . ID=gene-LIO31_RS02535;Name=LIO31_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02535 NZ_CP085086.1 Protein Homology CDS 493339 495351 . + 0 ID=cds-WP_074389857.1;Parent=gene-LIO31_RS02535;Dbxref=Genbank:WP_074389857.1;Name=WP_074389857.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775277.1;locus_tag=LIO31_RS02535;product=FtsX-like permease family protein;protein_id=WP_074389857.1;transl_table=11 NZ_CP085086.1 RefSeq gene 495556 495720 . + . ID=gene-LIO31_RS02540;Name=LIO31_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02540 NZ_CP085086.1 Protein Homology CDS 495556 495720 . + 0 ID=cds-WP_024405641.1;Parent=gene-LIO31_RS02540;Dbxref=Genbank:WP_024405641.1;Name=WP_024405641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027521.1;locus_tag=LIO31_RS02540;product=hypothetical protein;protein_id=WP_024405641.1;transl_table=11 NZ_CP085086.1 RefSeq gene 495717 496034 . + . ID=gene-LIO31_RS02545;Name=LIO31_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02545 NZ_CP085086.1 Protein Homology CDS 495717 496034 . + 0 ID=cds-WP_024405642.1;Parent=gene-LIO31_RS02545;Dbxref=Genbank:WP_024405642.1;Name=WP_024405642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194833.1;locus_tag=LIO31_RS02545;product=PadR family transcriptional regulator;protein_id=WP_024405642.1;transl_table=11 NZ_CP085086.1 RefSeq gene 496036 496830 . + . ID=gene-LIO31_RS02550;Name=LIO31_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02550 NZ_CP085086.1 Protein Homology CDS 496036 496830 . + 0 ID=cds-WP_024405643.1;Parent=gene-LIO31_RS02550;Dbxref=Genbank:WP_024405643.1;Name=WP_024405643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936709.1;locus_tag=LIO31_RS02550;product=hypothetical protein;protein_id=WP_024405643.1;transl_table=11 NZ_CP085086.1 RefSeq gene 496832 497656 . + . ID=gene-LIO31_RS02555;Name=LIO31_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02555 NZ_CP085086.1 Protein Homology CDS 496832 497656 . + 0 ID=cds-WP_029750537.1;Parent=gene-LIO31_RS02555;Dbxref=Genbank:WP_029750537.1;Name=WP_029750537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638397.1;locus_tag=LIO31_RS02555;product=hypothetical protein;protein_id=WP_029750537.1;transl_table=11 NZ_CP085086.1 RefSeq gene 497737 497973 . + . ID=gene-LIO31_RS02560;Name=LIO31_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02560 NZ_CP085086.1 Protein Homology CDS 497737 497973 . + 0 ID=cds-WP_004194840.1;Parent=gene-LIO31_RS02560;Dbxref=Genbank:WP_004194840.1;Name=WP_004194840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018367459.1;locus_tag=LIO31_RS02560;product=DUF2829 domain-containing protein;protein_id=WP_004194840.1;transl_table=11 NZ_CP085086.1 RefSeq gene 497966 498664 . + . ID=gene-LIO31_RS02565;Name=LIO31_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02565 NZ_CP085086.1 Protein Homology CDS 497966 498664 . + 0 ID=cds-WP_074389142.1;Parent=gene-LIO31_RS02565;Dbxref=Genbank:WP_074389142.1;Name=WP_074389142.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194841.1;locus_tag=LIO31_RS02565;product=3-oxoacyl-ACP reductase;protein_id=WP_074389142.1;transl_table=11 NZ_CP085086.1 RefSeq gene 498677 499228 . + . ID=gene-LIO31_RS02570;Name=LIO31_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02570 NZ_CP085086.1 Protein Homology CDS 498677 499228 . + 0 ID=cds-WP_074389141.1;Parent=gene-LIO31_RS02570;Dbxref=Genbank:WP_074389141.1;Name=WP_074389141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936706.1;locus_tag=LIO31_RS02570;product=GNAT family N-acetyltransferase;protein_id=WP_074389141.1;transl_table=11 NZ_CP085086.1 RefSeq gene 499225 499695 . + . ID=gene-LIO31_RS02575;Name=LIO31_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02575 NZ_CP085086.1 Protein Homology CDS 499225 499695 . + 0 ID=cds-WP_074389858.1;Parent=gene-LIO31_RS02575;Dbxref=Genbank:WP_074389858.1;Name=WP_074389858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647165.1;locus_tag=LIO31_RS02575;product=ASCH domain-containing protein;protein_id=WP_074389858.1;transl_table=11 NZ_CP085086.1 RefSeq gene 499872 501254 . + . ID=gene-LIO31_RS02580;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LIO31_RS02580 NZ_CP085086.1 Protein Homology CDS 499872 501254 . + 0 ID=cds-WP_014636692.1;Parent=gene-LIO31_RS02580;Dbxref=Genbank:WP_014636692.1;Name=WP_014636692.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647164.1;locus_tag=LIO31_RS02580;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_014636692.1;transl_table=11 NZ_CP085086.1 RefSeq gene 501263 501808 . + . ID=gene-LIO31_RS02585;Name=LIO31_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02585 NZ_CP085086.1 Protein Homology CDS 501263 501808 . + 0 ID=cds-WP_004194850.1;Parent=gene-LIO31_RS02585;Dbxref=Genbank:WP_004194850.1;Name=WP_004194850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194850.1;locus_tag=LIO31_RS02585;product=NUDIX hydrolase;protein_id=WP_004194850.1;transl_table=11 NZ_CP085086.1 RefSeq gene 501819 502139 . + . ID=gene-LIO31_RS02590;Name=macP;gbkey=Gene;gene=macP;gene_biotype=protein_coding;locus_tag=LIO31_RS02590 NZ_CP085086.1 Protein Homology CDS 501819 502139 . + 0 ID=cds-WP_002936700.1;Parent=gene-LIO31_RS02590;Dbxref=Genbank:WP_002936700.1;Name=WP_002936700.1;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936700.1;locus_tag=LIO31_RS02590;product=cell wall synthase accessory phosphoprotein MacP;protein_id=WP_002936700.1;transl_table=11 NZ_CP085086.1 RefSeq gene 502148 502837 . + . ID=gene-LIO31_RS02595;Name=LIO31_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02595 NZ_CP085086.1 Protein Homology CDS 502148 502837 . + 0 ID=cds-WP_015647163.1;Parent=gene-LIO31_RS02595;Dbxref=Genbank:WP_015647163.1;Name=WP_015647163.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647163.1;locus_tag=LIO31_RS02595;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_015647163.1;transl_table=11 NZ_CP085086.1 RefSeq gene 503034 503882 . + . ID=gene-LIO31_RS02600;Name=LIO31_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02600 NZ_CP085086.1 Protein Homology CDS 503034 503882 . + 0 ID=cds-WP_074389139.1;Parent=gene-LIO31_RS02600;Dbxref=Genbank:WP_074389139.1;Name=WP_074389139.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936195.1;locus_tag=LIO31_RS02600;product=pyridoxamine kinase;protein_id=WP_074389139.1;transl_table=11 NZ_CP085086.1 RefSeq gene 503879 504409 . + . ID=gene-LIO31_RS02605;Name=LIO31_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02605 NZ_CP085086.1 Protein Homology CDS 503879 504409 . + 0 ID=cds-WP_226960921.1;Parent=gene-LIO31_RS02605;Dbxref=Genbank:WP_226960921.1;Name=WP_226960921.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638390.1;locus_tag=LIO31_RS02605;product=ECF transporter S component;protein_id=WP_226960921.1;transl_table=11 NZ_CP085086.1 RefSeq gene 504929 505681 . - . ID=gene-LIO31_RS02610;Name=LIO31_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02610 NZ_CP085086.1 Protein Homology CDS 504929 505681 . - 0 ID=cds-WP_074389138.1;Parent=gene-LIO31_RS02610;Dbxref=Genbank:WP_074389138.1;Name=WP_074389138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936197.1;locus_tag=LIO31_RS02610;product=hypothetical protein;protein_id=WP_074389138.1;transl_table=11 NZ_CP085086.1 RefSeq gene 506071 509004 . + . ID=gene-LIO31_RS02615;Name=LIO31_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02615 NZ_CP085086.1 Protein Homology CDS 506071 509004 . + 0 ID=cds-WP_074389859.1;Parent=gene-LIO31_RS02615;Dbxref=Genbank:WP_074389859.1;Name=WP_074389859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647159.1;locus_tag=LIO31_RS02615;product=pneumococcal-type histidine triad protein;protein_id=WP_074389859.1;transl_table=11 NZ_CP085086.1 RefSeq gene 509438 511018 . + . ID=gene-LIO31_RS02620;Name=LIO31_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02620 NZ_CP085086.1 Protein Homology CDS 509438 511018 . + 0 ID=cds-WP_074389135.1;Parent=gene-LIO31_RS02620;Dbxref=Genbank:WP_074389135.1;Name=WP_074389135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673092.1;locus_tag=LIO31_RS02620;product=DEAD/DEAH box helicase;protein_id=WP_074389135.1;transl_table=11 NZ_CP085086.1 RefSeq gene 511163 511441 . + . ID=gene-LIO31_RS02625;Name=LIO31_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02625 NZ_CP085086.1 Protein Homology CDS 511163 511441 . + 0 ID=cds-WP_002936205.1;Parent=gene-LIO31_RS02625;Dbxref=Genbank:WP_002936205.1;Name=WP_002936205.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736179.1;locus_tag=LIO31_RS02625;product=autorepressor SdpR family transcription factor;protein_id=WP_002936205.1;transl_table=11 NZ_CP085086.1 RefSeq gene 511428 512030 . + . ID=gene-LIO31_RS02630;Name=LIO31_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02630 NZ_CP085086.1 Protein Homology CDS 511428 512030 . + 0 ID=cds-WP_074389134.1;Parent=gene-LIO31_RS02630;Dbxref=Genbank:WP_074389134.1;Name=WP_074389134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775273.1;locus_tag=LIO31_RS02630;product=DUF1648 domain-containing protein;protein_id=WP_074389134.1;transl_table=11 NZ_CP085086.1 RefSeq gene 512142 512549 . + . ID=gene-LIO31_RS02635;Name=LIO31_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02635 NZ_CP085086.1 Protein Homology CDS 512142 512549 . + 0 ID=cds-WP_074389133.1;Parent=gene-LIO31_RS02635;Dbxref=Genbank:WP_074389133.1;Name=WP_074389133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936207.1;locus_tag=LIO31_RS02635;product=GNAT family N-acetyltransferase;protein_id=WP_074389133.1;transl_table=11 NZ_CP085086.1 RefSeq gene 512682 513293 . + . ID=gene-LIO31_RS02640;Name=LIO31_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02640 NZ_CP085086.1 Protein Homology CDS 512682 513293 . + 0 ID=cds-WP_074389132.1;Parent=gene-LIO31_RS02640;Dbxref=Genbank:WP_074389132.1;Name=WP_074389132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638381.1;locus_tag=LIO31_RS02640;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_074389132.1;transl_table=11 NZ_CP085086.1 RefSeq gene 513309 513581 . - . ID=gene-LIO31_RS02645;Name=LIO31_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02645 NZ_CP085086.1 Protein Homology CDS 513309 513581 . - 0 ID=cds-WP_023370952.1;Parent=gene-LIO31_RS02645;Dbxref=Genbank:WP_023370952.1;Name=WP_023370952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937340.1;locus_tag=LIO31_RS02645;product=GIY-YIG nuclease family protein;protein_id=WP_023370952.1;transl_table=11 NZ_CP085086.1 RefSeq gene 513571 514320 . - . ID=gene-LIO31_RS02650;Name=LIO31_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02650 NZ_CP085086.1 Protein Homology CDS 513571 514320 . - 0 ID=cds-WP_074389131.1;Parent=gene-LIO31_RS02650;Dbxref=Genbank:WP_074389131.1;Name=WP_074389131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736177.1;locus_tag=LIO31_RS02650;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_074389131.1;transl_table=11 NZ_CP085086.1 RefSeq gene 514781 514972 . - . ID=gene-LIO31_RS02655;Name=LIO31_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02655 NZ_CP085086.1 GeneMarkS-2+ CDS 514781 514972 . - 0 ID=cds-WP_074389130.1;Parent=gene-LIO31_RS02655;Dbxref=Genbank:WP_074389130.1;Name=WP_074389130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS02655;product=hypothetical protein;protein_id=WP_074389130.1;transl_table=11 NZ_CP085086.1 RefSeq gene 515032 515235 . - . ID=gene-LIO31_RS02660;Name=LIO31_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02660 NZ_CP085086.1 Protein Homology CDS 515032 515235 . - 0 ID=cds-WP_226319120.1;Parent=gene-LIO31_RS02660;Dbxref=Genbank:WP_226319120.1;Name=WP_226319120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736175.1;locus_tag=LIO31_RS02660;product=hypothetical protein;protein_id=WP_226319120.1;transl_table=11 NZ_CP085086.1 RefSeq gene 515249 515515 . - . ID=gene-LIO31_RS02665;Name=LIO31_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02665 NZ_CP085086.1 Protein Homology CDS 515249 515515 . - 0 ID=cds-WP_002937331.1;Parent=gene-LIO31_RS02665;Dbxref=Genbank:WP_002937331.1;Name=WP_002937331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298904.1;locus_tag=LIO31_RS02665;product=hypothetical protein;protein_id=WP_002937331.1;transl_table=11 NZ_CP085086.1 RefSeq gene 515717 516808 . + . ID=gene-LIO31_RS02670;Name=LIO31_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02670 NZ_CP085086.1 Protein Homology CDS 515717 516808 . + 0 ID=cds-WP_074389860.1;Parent=gene-LIO31_RS02670;Dbxref=Genbank:WP_074389860.1;Name=WP_074389860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647148.1;locus_tag=LIO31_RS02670;product=cystathionine gamma-synthase;protein_id=WP_074389860.1;transl_table=11 NZ_CP085086.1 RefSeq gene 516812 517972 . + . ID=gene-LIO31_RS02675;Name=LIO31_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02675 NZ_CP085086.1 Protein Homology CDS 516812 517972 . + 0 ID=cds-WP_074389127.1;Parent=gene-LIO31_RS02675;Dbxref=Genbank:WP_074389127.1;Name=WP_074389127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736171.1;locus_tag=LIO31_RS02675;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_074389127.1;transl_table=11 NZ_CP085086.1 RefSeq gene 518004 518843 . - . ID=gene-LIO31_RS02680;Name=LIO31_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02680 NZ_CP085086.1 Protein Homology CDS 518004 518843 . - 0 ID=cds-WP_074389126.1;Parent=gene-LIO31_RS02680;Dbxref=Genbank:WP_074389126.1;Name=WP_074389126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775269.1;locus_tag=LIO31_RS02680;product=AraC family transcriptional regulator;protein_id=WP_074389126.1;transl_table=11 NZ_CP085086.1 RefSeq gene 518948 521122 . + . ID=gene-LIO31_RS02685;Name=LIO31_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02685 NZ_CP085086.1 Protein Homology CDS 518948 521122 . + 0 ID=cds-WP_074389125.1;Parent=gene-LIO31_RS02685;Dbxref=Genbank:WP_074389125.1;Name=WP_074389125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298910.1;locus_tag=LIO31_RS02685;product=alpha-galactosidase;protein_id=WP_074389125.1;transl_table=11 NZ_CP085086.1 RefSeq gene 521135 522370 . + . ID=gene-LIO31_RS02690;Name=LIO31_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02690 NZ_CP085086.1 Protein Homology CDS 521135 522370 . + 0 ID=cds-WP_074389861.1;Parent=gene-LIO31_RS02690;Dbxref=Genbank:WP_074389861.1;Name=WP_074389861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775660.1;locus_tag=LIO31_RS02690;product=extracellular solute-binding protein;protein_id=WP_074389861.1;transl_table=11 NZ_CP085086.1 RefSeq gene 522505 523377 . + . ID=gene-LIO31_RS02695;Name=LIO31_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02695 NZ_CP085086.1 Protein Homology CDS 522505 523377 . + 0 ID=cds-WP_013730463.1;Parent=gene-LIO31_RS02695;Dbxref=Genbank:WP_013730463.1;Name=WP_013730463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937313.1;locus_tag=LIO31_RS02695;product=sugar ABC transporter permease;protein_id=WP_013730463.1;transl_table=11 NZ_CP085086.1 RefSeq gene 523388 524218 . + . ID=gene-LIO31_RS02700;Name=LIO31_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02700 NZ_CP085086.1 Protein Homology CDS 523388 524218 . + 0 ID=cds-WP_002937312.1;Parent=gene-LIO31_RS02700;Dbxref=Genbank:WP_002937312.1;Name=WP_002937312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937312.1;locus_tag=LIO31_RS02700;product=carbohydrate ABC transporter permease;protein_id=WP_002937312.1;transl_table=11 NZ_CP085086.1 RefSeq gene 524288 525736 . + . ID=gene-LIO31_RS02705;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=LIO31_RS02705 NZ_CP085086.1 Protein Homology CDS 524288 525736 . + 0 ID=cds-WP_074389863.1;Parent=gene-LIO31_RS02705;Dbxref=Genbank:WP_074389863.1;Name=WP_074389863.1;Ontology_term=GO:0005975,GO:0004645;gbkey=CDS;gene=gtfA;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638368.1;locus_tag=LIO31_RS02705;product=sucrose phosphorylase;protein_id=WP_074389863.1;transl_table=11 NZ_CP085086.1 RefSeq gene 525808 527424 . + . ID=gene-LIO31_RS02710;Name=LIO31_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02710 NZ_CP085086.1 Protein Homology CDS 525808 527424 . + 0 ID=cds-WP_074389864.1;Parent=gene-LIO31_RS02710;Dbxref=Genbank:WP_074389864.1;Name=WP_074389864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638367.1;locus_tag=LIO31_RS02710;product=alpha-glucosidase;protein_id=WP_074389864.1;transl_table=11 NZ_CP085086.1 RefSeq gene 527504 528133 . + . ID=gene-LIO31_RS02715;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LIO31_RS02715 NZ_CP085086.1 Protein Homology CDS 527504 528133 . + 0 ID=cds-WP_012027487.1;Parent=gene-LIO31_RS02715;Dbxref=Genbank:WP_012027487.1;Name=WP_012027487.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=LIO31_RS02715;product=uracil phosphoribosyltransferase;protein_id=WP_012027487.1;transl_table=11 NZ_CP085086.1 RefSeq gene 528229 528840 . + . ID=gene-LIO31_RS02720;Name=LIO31_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02720 NZ_CP085086.1 Protein Homology CDS 528229 528840 . + 0 ID=cds-WP_223375679.1;Parent=gene-LIO31_RS02720;Dbxref=Genbank:WP_223375679.1;Name=WP_223375679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262672.1;locus_tag=LIO31_RS02720;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_223375679.1;transl_table=11 NZ_CP085086.1 RefSeq gene 528957 529229 . + . ID=gene-LIO31_RS02725;Name=LIO31_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02725 NZ_CP085086.1 Protein Homology CDS 528957 529229 . + 0 ID=cds-WP_002937299.1;Parent=gene-LIO31_RS02725;Dbxref=Genbank:WP_002937299.1;Name=WP_002937299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027484.1;locus_tag=LIO31_RS02725;product=YlbG family protein;protein_id=WP_002937299.1;transl_table=11 NZ_CP085086.1 RefSeq gene 529362 530531 . + . ID=gene-LIO31_RS02730;Name=LIO31_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02730 NZ_CP085086.1 Protein Homology CDS 529362 530531 . + 0 ID=cds-WP_024418077.1;Parent=gene-LIO31_RS02730;Dbxref=Genbank:WP_024418077.1;Name=WP_024418077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775268.1;locus_tag=LIO31_RS02730;product=ABC transporter substrate-binding protein;protein_id=WP_024418077.1;transl_table=11 NZ_CP085086.1 RefSeq gene 530732 531619 . + . ID=gene-LIO31_RS02735;Name=LIO31_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02735 NZ_CP085086.1 Protein Homology CDS 530732 531619 . + 0 ID=cds-WP_226960922.1;Parent=gene-LIO31_RS02735;Dbxref=Genbank:WP_226960922.1;Name=WP_226960922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897070.1;locus_tag=LIO31_RS02735;product=branched-chain amino acid ABC transporter permease;protein_id=WP_226960922.1;transl_table=11 NZ_CP085086.1 RefSeq gene 531622 532569 . + . ID=gene-LIO31_RS02740;Name=LIO31_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02740 NZ_CP085086.1 Protein Homology CDS 531622 532569 . + 0 ID=cds-WP_002937293.1;Parent=gene-LIO31_RS02740;Dbxref=Genbank:WP_002937293.1;Name=WP_002937293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937293.1;locus_tag=LIO31_RS02740;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002937293.1;transl_table=11 NZ_CP085086.1 RefSeq gene 532569 533333 . + . ID=gene-LIO31_RS02745;Name=LIO31_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02745 NZ_CP085086.1 Protein Homology CDS 532569 533333 . + 0 ID=cds-WP_002937291.1;Parent=gene-LIO31_RS02745;Dbxref=Genbank:WP_002937291.1;Name=WP_002937291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=LIO31_RS02745;product=ABC transporter ATP-binding protein;protein_id=WP_002937291.1;transl_table=11 NZ_CP085086.1 RefSeq gene 533333 534043 . + . ID=gene-LIO31_RS02750;Name=LIO31_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02750 NZ_CP085086.1 Protein Homology CDS 533333 534043 . + 0 ID=cds-WP_002937288.1;Parent=gene-LIO31_RS02750;Dbxref=Genbank:WP_002937288.1;Name=WP_002937288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=LIO31_RS02750;product=ABC transporter ATP-binding protein;protein_id=WP_002937288.1;transl_table=11 NZ_CP085086.1 RefSeq gene 534290 535045 . + . ID=gene-LIO31_RS02755;Name=LIO31_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02755 NZ_CP085086.1 Protein Homology CDS 534290 535045 . + 0 ID=cds-WP_074389115.1;Parent=gene-LIO31_RS02755;Dbxref=Genbank:WP_074389115.1;Name=WP_074389115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775267.1;locus_tag=LIO31_RS02755;product=epoxyqueuosine reductase QueH;protein_id=WP_074389115.1;transl_table=11 NZ_CP085086.1 RefSeq gene 535153 535743 . + . ID=gene-LIO31_RS02760;Name=LIO31_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02760 NZ_CP085086.1 Protein Homology CDS 535153 535743 . + 0 ID=cds-WP_024402863.1;Parent=gene-LIO31_RS02760;Dbxref=Genbank:WP_024402863.1;Name=WP_024402863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445299.1;locus_tag=LIO31_RS02760;product=hypothetical protein;protein_id=WP_024402863.1;transl_table=11 NZ_CP085086.1 RefSeq gene 535893 536924 . + . ID=gene-LIO31_RS02765;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LIO31_RS02765 NZ_CP085086.1 Protein Homology CDS 535893 536924 . + 0 ID=cds-WP_024383809.1;Parent=gene-LIO31_RS02765;Dbxref=Genbank:WP_024383809.1;Name=WP_024383809.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028395.1;locus_tag=LIO31_RS02765;product=DNA polymerase III subunit delta;protein_id=WP_024383809.1;transl_table=11 NZ_CP085086.1 RefSeq gene 537037 537642 . + . ID=gene-LIO31_RS02770;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=LIO31_RS02770 NZ_CP085086.1 Protein Homology CDS 537037 537642 . + 0 ID=cds-WP_024406052.1;Parent=gene-LIO31_RS02770;Dbxref=Genbank:WP_024406052.1;Name=WP_024406052.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004398583.1;locus_tag=LIO31_RS02770;product=superoxide dismutase SodA;protein_id=WP_024406052.1;transl_table=11 NZ_CP085086.1 RefSeq gene 537904 539928 . + . ID=gene-LIO31_RS02775;Name=LIO31_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02775 NZ_CP085086.1 Protein Homology CDS 537904 539928 . + 0 ID=cds-WP_226960923.1;Parent=gene-LIO31_RS02775;Dbxref=Genbank:WP_226960923.1;Name=WP_226960923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775266.1;locus_tag=LIO31_RS02775;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_226960923.1;transl_table=11 NZ_CP085086.1 RefSeq gene 540124 540195 . + . ID=gene-LIO31_RS02780;Name=LIO31_RS02780;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS02780 NZ_CP085086.1 tRNAscan-SE tRNA 540124 540195 . + . ID=rna-LIO31_RS02780;Parent=gene-LIO31_RS02780;anticodon=(pos:540157..540159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS02780;product=tRNA-Arg NZ_CP085086.1 tRNAscan-SE exon 540124 540195 . + . ID=exon-LIO31_RS02780-1;Parent=rna-LIO31_RS02780;anticodon=(pos:540157..540159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS02780;product=tRNA-Arg NZ_CP085086.1 RefSeq gene 540216 541430 . - . ID=gene-LIO31_RS02785;Name=LIO31_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02785 NZ_CP085086.1 Protein Homology CDS 540216 541430 . - 0 ID=cds-WP_024406053.1;Parent=gene-LIO31_RS02785;Dbxref=Genbank:WP_024406053.1;Name=WP_024406053.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910467.1;locus_tag=LIO31_RS02785;product=chloride channel protein;protein_id=WP_024406053.1;transl_table=11 NZ_CP085086.1 RefSeq gene 541420 541698 . - . ID=gene-LIO31_RS02790;Name=LIO31_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02790 NZ_CP085086.1 Protein Homology CDS 541420 541698 . - 0 ID=cds-WP_012027471.1;Parent=gene-LIO31_RS02790;Dbxref=Genbank:WP_012027471.1;Name=WP_012027471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730456.1;locus_tag=LIO31_RS02790;product=chorismate mutase;protein_id=WP_012027471.1;transl_table=11 NZ_CP085086.1 RefSeq gene 541780 542049 . - . ID=gene-LIO31_RS02795;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LIO31_RS02795 NZ_CP085086.1 Protein Homology CDS 541780 542049 . - 0 ID=cds-WP_024406054.1;Parent=gene-LIO31_RS02795;Dbxref=Genbank:WP_024406054.1;Name=WP_024406054.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560987.1;locus_tag=LIO31_RS02795;product=30S ribosomal protein S14;protein_id=WP_024406054.1;transl_table=11 NZ_CP085086.1 RefSeq gene 542187 542648 . - . ID=gene-LIO31_RS02800;Name=LIO31_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02800 NZ_CP085086.1 Protein Homology CDS 542187 542648 . - 0 ID=cds-WP_024406055.1;Parent=gene-LIO31_RS02800;Dbxref=Genbank:WP_024406055.1;Name=WP_024406055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940395.1;locus_tag=LIO31_RS02800;product=flavodoxin;protein_id=WP_024406055.1;transl_table=11 NZ_CP085086.1 RefSeq gene 542743 543687 . + . ID=gene-LIO31_RS02805;Name=LIO31_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02805 NZ_CP085086.1 Protein Homology CDS 542743 543687 . + 0 ID=cds-WP_024406056.1;Parent=gene-LIO31_RS02805;Dbxref=Genbank:WP_024406056.1;Name=WP_024406056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638354.1;locus_tag=LIO31_RS02805;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_024406056.1;transl_table=11 NZ_CP085086.1 RefSeq gene 543674 544702 . + . ID=gene-LIO31_RS02810;Name=LIO31_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02810 NZ_CP085086.1 Protein Homology CDS 543674 544702 . + 0 ID=cds-WP_024406057.1;Parent=gene-LIO31_RS02810;Dbxref=Genbank:WP_024406057.1;Name=WP_024406057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647134.1;locus_tag=LIO31_RS02810;product=FAD:protein FMN transferase;protein_id=WP_024406057.1;transl_table=11 NZ_CP085086.1 RefSeq gene 544782 545063 . + . ID=gene-LIO31_RS02815;Name=LIO31_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02815 NZ_CP085086.1 Protein Homology CDS 544782 545063 . + 0 ID=cds-WP_014636072.1;Parent=gene-LIO31_RS02815;Dbxref=Genbank:WP_014636072.1;Name=WP_014636072.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008808933.1;locus_tag=LIO31_RS02815;product=type B 50S ribosomal protein L31;protein_id=WP_014636072.1;transl_table=11 NZ_CP085086.1 RefSeq gene 545349 546641 . - . ID=gene-LIO31_RS02820;Name=LIO31_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02820 NZ_CP085086.1 Protein Homology CDS 545349 546641 . - 0 ID=cds-WP_226960943.1;Parent=gene-LIO31_RS02820;Dbxref=Genbank:WP_226960943.1;Name=WP_226960943.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS02820;product=IS110 family transposase;protein_id=WP_226960943.1;transl_table=11 NZ_CP085086.1 RefSeq gene 547164 548393 . + . ID=gene-LIO31_RS02825;Name=LIO31_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02825 NZ_CP085086.1 Protein Homology CDS 547164 548393 . + 0 ID=cds-WP_029750517.1;Parent=gene-LIO31_RS02825;Dbxref=Genbank:WP_029750517.1;Name=WP_029750517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027447.1;locus_tag=LIO31_RS02825;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_029750517.1;transl_table=11 NZ_CP085086.1 RefSeq gene 548407 548946 . + . ID=gene-LIO31_RS02830;Name=LIO31_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02830 NZ_CP085086.1 Protein Homology CDS 548407 548946 . + 0 ID=cds-WP_015647132.1;Parent=gene-LIO31_RS02830;Dbxref=Genbank:WP_015647132.1;Name=WP_015647132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939430.1;locus_tag=LIO31_RS02830;product=DJ-1/PfpI family protein;protein_id=WP_015647132.1;transl_table=11 NZ_CP085086.1 RefSeq gene 549128 551080 . + . ID=gene-LIO31_RS02835;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LIO31_RS02835 NZ_CP085086.1 Protein Homology CDS 549128 551080 . + 0 ID=cds-WP_002939427.1;Parent=gene-LIO31_RS02835;Dbxref=Genbank:WP_002939427.1;Name=WP_002939427.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604652.1;locus_tag=LIO31_RS02835;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_002939427.1;transl_table=11 NZ_CP085086.1 RefSeq gene 551169 552893 . + . ID=gene-LIO31_RS02840;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=LIO31_RS02840 NZ_CP085086.1 Protein Homology CDS 551169 552893 . + 0 ID=cds-WP_074389760.1;Parent=gene-LIO31_RS02840;Dbxref=Genbank:WP_074389760.1;Name=WP_074389760.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730450.1;locus_tag=LIO31_RS02840;product=septation ring formation regulator EzrA;protein_id=WP_074389760.1;transl_table=11 NZ_CP085086.1 RefSeq gene 552945 553580 . + . ID=gene-LIO31_RS02845;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LIO31_RS02845 NZ_CP085086.1 Protein Homology CDS 552945 553580 . + 0 ID=cds-WP_024405359.1;Parent=gene-LIO31_RS02845;Dbxref=Genbank:WP_024405359.1;Name=WP_024405359.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939614.1;locus_tag=LIO31_RS02845;product=phosphoserine phosphatase SerB;protein_id=WP_024405359.1;transl_table=11 NZ_CP085086.1 RefSeq gene 553868 554518 . - . ID=gene-LIO31_RS02850;Name=LIO31_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02850 NZ_CP085086.1 Protein Homology CDS 553868 554518 . - 0 ID=cds-WP_023370907.1;Parent=gene-LIO31_RS02850;Dbxref=Genbank:WP_023370907.1;Name=WP_023370907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939615.1;locus_tag=LIO31_RS02850;product=HAD family hydrolase;protein_id=WP_023370907.1;transl_table=11 NZ_CP085086.1 RefSeq gene 554626 555753 . + . ID=gene-LIO31_RS02855;Name=LIO31_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02855 NZ_CP085086.1 Protein Homology CDS 554626 555753 . + 0 ID=cds-WP_024406009.1;Parent=gene-LIO31_RS02855;Dbxref=Genbank:WP_024406009.1;Name=WP_024406009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775652.1;locus_tag=LIO31_RS02855;product=glycerate kinase;protein_id=WP_024406009.1;transl_table=11 NZ_CP085086.1 RefSeq gene 555744 555971 . + . ID=gene-LIO31_RS02860;Name=LIO31_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02860 NZ_CP085086.1 Protein Homology CDS 555744 555971 . + 0 ID=cds-WP_024406008.1;Parent=gene-LIO31_RS02860;Dbxref=Genbank:WP_024406008.1;Name=WP_024406008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935708.1;locus_tag=LIO31_RS02860;product=hypothetical protein;protein_id=WP_024406008.1;transl_table=11 NZ_CP085086.1 RefSeq gene 555981 556433 . - . ID=gene-LIO31_RS02865;Name=LIO31_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02865 NZ_CP085086.1 Protein Homology CDS 555981 556433 . - 0 ID=cds-WP_012028381.1;Parent=gene-LIO31_RS02865;Dbxref=Genbank:WP_012028381.1;Name=WP_012028381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730449.1;locus_tag=LIO31_RS02865;product=DUF1694 domain-containing protein;protein_id=WP_012028381.1;transl_table=11 NZ_CP085086.1 RefSeq gene 556583 557890 . + . ID=gene-LIO31_RS02870;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LIO31_RS02870 NZ_CP085086.1 Protein Homology CDS 556583 557890 . + 0 ID=cds-WP_002935704.1;Parent=gene-LIO31_RS02870;Dbxref=Genbank:WP_002935704.1;Name=WP_002935704.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=LIO31_RS02870;product=phosphopyruvate hydratase;protein_id=WP_002935704.1;transl_table=11 NZ_CP085086.1 RefSeq gene 558114 558335 . + . ID=gene-LIO31_RS02875;Name=LIO31_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02875 NZ_CP085086.1 Protein Homology CDS 558114 558335 . + 0 ID=cds-WP_012775256.1;Parent=gene-LIO31_RS02875;Dbxref=Genbank:WP_012775256.1;Name=WP_012775256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380798.1;locus_tag=LIO31_RS02875;product=DUF6290 family protein;protein_id=WP_012775256.1;transl_table=11 NZ_CP085086.1 RefSeq gene 558337 558597 . + . ID=gene-LIO31_RS02880;Name=LIO31_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02880 NZ_CP085086.1 Protein Homology CDS 558337 558597 . + 0 ID=cds-WP_012027435.1;Parent=gene-LIO31_RS02880;Dbxref=Genbank:WP_012027435.1;Name=WP_012027435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027435.1;locus_tag=LIO31_RS02880;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012027435.1;transl_table=11 NZ_CP085086.1 RefSeq gene 558764 559405 . + . ID=gene-LIO31_RS02885;Name=LIO31_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02885 NZ_CP085086.1 Protein Homology CDS 558764 559405 . + 0 ID=cds-WP_023370899.1;Parent=gene-LIO31_RS02885;Dbxref=Genbank:WP_023370899.1;Name=WP_023370899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775255.1;locus_tag=LIO31_RS02885;product=HAD family hydrolase;protein_id=WP_023370899.1;transl_table=11 NZ_CP085086.1 RefSeq gene 559438 559623 . - . ID=gene-LIO31_RS02890;Name=LIO31_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02890 NZ_CP085086.1 Protein Homology CDS 559438 559623 . - 0 ID=cds-WP_002935693.1;Parent=gene-LIO31_RS02890;Dbxref=Genbank:WP_002935693.1;Name=WP_002935693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910439.1;locus_tag=LIO31_RS02890;product=hypothetical protein;protein_id=WP_002935693.1;transl_table=11 NZ_CP085086.1 RefSeq gene 559687 560691 . - . ID=gene-LIO31_RS02895;Name=LIO31_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02895 NZ_CP085086.1 Protein Homology CDS 559687 560691 . - 0 ID=cds-WP_023370897.1;Parent=gene-LIO31_RS02895;Dbxref=Genbank:WP_023370897.1;Name=WP_023370897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910438.1;locus_tag=LIO31_RS02895;product=lactonase family protein;protein_id=WP_023370897.1;transl_table=11 NZ_CP085086.1 RefSeq gene 560827 561993 . + . ID=gene-LIO31_RS02900;Name=LIO31_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02900 NZ_CP085086.1 Protein Homology CDS 560827 561993 . + 0 ID=cds-WP_012775254.1;Parent=gene-LIO31_RS02900;Dbxref=Genbank:WP_012775254.1;Name=WP_012775254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435446.1;locus_tag=LIO31_RS02900;product=AI-2E family transporter;protein_id=WP_012775254.1;transl_table=11 NZ_CP085086.1 RefSeq gene 561983 563212 . + . ID=gene-LIO31_RS02905;Name=LIO31_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02905 NZ_CP085086.1 Protein Homology CDS 561983 563212 . + 0 ID=cds-WP_226960924.1;Parent=gene-LIO31_RS02905;Dbxref=Genbank:WP_226960924.1;Name=WP_226960924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935689.1;locus_tag=LIO31_RS02905;product=tetratricopeptide repeat protein;protein_id=WP_226960924.1;transl_table=11 NZ_CP085086.1 RefSeq gene 563216 563932 . + . ID=gene-LIO31_RS02910;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=LIO31_RS02910 NZ_CP085086.1 Protein Homology CDS 563216 563932 . + 0 ID=cds-WP_023370894.1;Parent=gene-LIO31_RS02910;Dbxref=Genbank:WP_023370894.1;Name=WP_023370894.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019322637.1;locus_tag=LIO31_RS02910;product=acetolactate decarboxylase;protein_id=WP_023370894.1;transl_table=11 NZ_CP085086.1 RefSeq gene 564087 564968 . + . ID=gene-LIO31_RS02915;Name=LIO31_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02915 NZ_CP085086.1 Protein Homology CDS 564087 564968 . + 0 ID=cds-WP_023370891.1;Parent=gene-LIO31_RS02915;Dbxref=Genbank:WP_023370891.1;Name=WP_023370891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004228158.1;locus_tag=LIO31_RS02915;product=extracellular solute-binding protein;protein_id=WP_023370891.1;transl_table=11 NZ_CP085086.1 RefSeq gene 564979 565827 . + . ID=gene-LIO31_RS02920;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LIO31_RS02920 NZ_CP085086.1 Protein Homology CDS 564979 565827 . + 0 ID=cds-WP_023370889.1;Parent=gene-LIO31_RS02920;Dbxref=Genbank:WP_023370889.1;Name=WP_023370889.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006531928.1;locus_tag=LIO31_RS02920;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_023370889.1;transl_table=11 NZ_CP085086.1 RefSeq gene 565831 566682 . + . ID=gene-LIO31_RS02925;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LIO31_RS02925 NZ_CP085086.1 Protein Homology CDS 565831 566682 . + 0 ID=cds-WP_226960925.1;Parent=gene-LIO31_RS02925;Dbxref=Genbank:WP_226960925.1;Name=WP_226960925.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370277.1;locus_tag=LIO31_RS02925;product=phosphate ABC transporter permease PstA;protein_id=WP_226960925.1;transl_table=11 NZ_CP085086.1 RefSeq gene 566675 567424 . + . ID=gene-LIO31_RS02930;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LIO31_RS02930 NZ_CP085086.1 Protein Homology CDS 566675 567424 . + 0 ID=cds-WP_023370886.1;Parent=gene-LIO31_RS02930;Dbxref=Genbank:WP_023370886.1;Name=WP_023370886.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000041123.1;locus_tag=LIO31_RS02930;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_023370886.1;transl_table=11 NZ_CP085086.1 RefSeq gene 567424 568065 . + . ID=gene-LIO31_RS02935;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LIO31_RS02935 NZ_CP085086.1 Protein Homology CDS 567424 568065 . + 0 ID=cds-WP_023370883.1;Parent=gene-LIO31_RS02935;Dbxref=Genbank:WP_023370883.1;Name=WP_023370883.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226231.1;locus_tag=LIO31_RS02935;product=phosphate signaling complex protein PhoU;protein_id=WP_023370883.1;transl_table=11 NZ_CP085086.1 RefSeq gene 568071 568748 . + . ID=gene-LIO31_RS02940;Name=LIO31_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02940 NZ_CP085086.1 Protein Homology CDS 568071 568748 . + 0 ID=cds-WP_023370881.1;Parent=gene-LIO31_RS02940;Dbxref=Genbank:WP_023370881.1;Name=WP_023370881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001931721.1;locus_tag=LIO31_RS02940;product=response regulator transcription factor;protein_id=WP_023370881.1;transl_table=11 NZ_CP085086.1 RefSeq gene 568741 570399 . + . ID=gene-LIO31_RS02945;Name=LIO31_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02945 NZ_CP085086.1 Protein Homology CDS 568741 570399 . + 0 ID=cds-WP_023370879.1;Parent=gene-LIO31_RS02945;Dbxref=Genbank:WP_023370879.1;Name=WP_023370879.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LIO31_RS02945;product=ATP-binding protein;protein_id=WP_023370879.1;transl_table=11 NZ_CP085086.1 RefSeq gene 570418 572079 . - . ID=gene-LIO31_RS02950;Name=LIO31_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02950 NZ_CP085086.1 Protein Homology CDS 570418 572079 . - 0 ID=cds-WP_226960926.1;Parent=gene-LIO31_RS02950;Dbxref=Genbank:WP_226960926.1;Name=WP_226960926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_094859469.1;locus_tag=LIO31_RS02950;product=NFACT RNA binding domain-containing protein;protein_id=WP_226960926.1;transl_table=11 NZ_CP085086.1 RefSeq gene 572385 573224 . + . ID=gene-LIO31_RS02955;Name=LIO31_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02955 NZ_CP085086.1 Protein Homology CDS 572385 573224 . + 0 ID=cds-WP_012775252.1;Parent=gene-LIO31_RS02955;Dbxref=Genbank:WP_012775252.1;Name=WP_012775252.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910435.1;locus_tag=LIO31_RS02955;product=PRD domain-containing protein;protein_id=WP_012775252.1;transl_table=11 NZ_CP085086.1 RefSeq gene 573235 575076 . + . ID=gene-LIO31_RS02960;Name=LIO31_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02960 NZ_CP085086.1 Protein Homology CDS 573235 575076 . + 0 ID=cds-WP_074389238.1;Parent=gene-LIO31_RS02960;Dbxref=Genbank:WP_074389238.1;Name=WP_074389238.1;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647101.1;locus_tag=LIO31_RS02960;product=beta-glucoside-specific PTS transporter subunit IIABC;protein_id=WP_074389238.1;transl_table=11 NZ_CP085086.1 RefSeq gene 575091 576515 . + . ID=gene-LIO31_RS02965;Name=LIO31_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02965 NZ_CP085086.1 Protein Homology CDS 575091 576515 . + 0 ID=cds-WP_074389237.1;Parent=gene-LIO31_RS02965;Dbxref=Genbank:WP_074389237.1;Name=WP_074389237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027423.1;locus_tag=LIO31_RS02965;product=glycoside hydrolase family 1 protein;protein_id=WP_074389237.1;transl_table=11 NZ_CP085086.1 RefSeq gene 577272 578273 . + . ID=gene-LIO31_RS02970;Name=LIO31_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02970 NZ_CP085086.1 Protein Homology CDS 577272 578273 . + 0 ID=cds-WP_074389236.1;Parent=gene-LIO31_RS02970;Dbxref=Genbank:WP_074389236.1;Name=WP_074389236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939684.1;locus_tag=LIO31_RS02970;product=ABC transporter substrate-binding protein;protein_id=WP_074389236.1;transl_table=11 NZ_CP085086.1 RefSeq gene 578296 579162 . + . ID=gene-LIO31_RS02975;Name=LIO31_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02975 NZ_CP085086.1 Protein Homology CDS 578296 579162 . + 0 ID=cds-WP_012027421.1;Parent=gene-LIO31_RS02975;Dbxref=Genbank:WP_012027421.1;Name=WP_012027421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902146.1;locus_tag=LIO31_RS02975;product=ABC transporter permease;protein_id=WP_012027421.1;transl_table=11 NZ_CP085086.1 RefSeq gene 579159 579917 . + . ID=gene-LIO31_RS02980;Name=LIO31_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02980 NZ_CP085086.1 Protein Homology CDS 579159 579917 . + 0 ID=cds-WP_023370869.1;Parent=gene-LIO31_RS02980;Dbxref=Genbank:WP_023370869.1;Name=WP_023370869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125420.1;locus_tag=LIO31_RS02980;product=ABC transporter ATP-binding protein;protein_id=WP_023370869.1;transl_table=11 NZ_CP085086.1 RefSeq gene 580100 580585 . + . ID=gene-LIO31_RS02985;Name=LIO31_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02985 NZ_CP085086.1 Protein Homology CDS 580100 580585 . + 0 ID=cds-WP_024405986.1;Parent=gene-LIO31_RS02985;Dbxref=Genbank:WP_024405986.1;Name=WP_024405986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775250.1;locus_tag=LIO31_RS02985;product=prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_024405986.1;transl_table=11 NZ_CP085086.1 RefSeq gene 580636 580995 . + . ID=gene-LIO31_RS02990;Name=LIO31_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02990 NZ_CP085086.1 Protein Homology CDS 580636 580995 . + 0 ID=cds-WP_015445290.1;Parent=gene-LIO31_RS02990;Dbxref=Genbank:WP_015445290.1;Name=WP_015445290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028374.1;locus_tag=LIO31_RS02990;product=hypothetical protein;protein_id=WP_015445290.1;transl_table=11 NZ_CP085086.1 RefSeq gene 581251 582912 . + . ID=gene-LIO31_RS02995;Name=LIO31_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS02995 NZ_CP085086.1 Protein Homology CDS 581251 582912 . + 0 ID=cds-WP_002935677.1;Parent=gene-LIO31_RS02995;Dbxref=Genbank:WP_002935677.1;Name=WP_002935677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263099.1;locus_tag=LIO31_RS02995;product=ribonuclease J;protein_id=WP_002935677.1;transl_table=11 NZ_CP085086.1 RefSeq gene 582977 583753 . + . ID=gene-LIO31_RS03000;Name=LIO31_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03000 NZ_CP085086.1 Protein Homology CDS 582977 583753 . + 0 ID=cds-WP_024405985.1;Parent=gene-LIO31_RS03000;Dbxref=Genbank:WP_024405985.1;Name=WP_024405985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290006.1;locus_tag=LIO31_RS03000;product=esterase family protein;protein_id=WP_024405985.1;transl_table=11 NZ_CP085086.1 RefSeq gene 583819 584514 . + . ID=gene-LIO31_RS03005;Name=LIO31_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03005 NZ_CP085086.1 Protein Homology CDS 583819 584514 . + 0 ID=cds-WP_024385959.1;Parent=gene-LIO31_RS03005;Dbxref=Genbank:WP_024385959.1;Name=WP_024385959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736142.1;locus_tag=LIO31_RS03005;product=M57 family metalloprotease;protein_id=WP_024385959.1;transl_table=11 NZ_CP085086.1 RefSeq gene 584525 584890 . + . ID=gene-LIO31_RS03010;Name=LIO31_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03010 NZ_CP085086.1 Protein Homology CDS 584525 584890 . + 0 ID=cds-WP_012775249.1;Parent=gene-LIO31_RS03010;Dbxref=Genbank:WP_012775249.1;Name=WP_012775249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736141.1;locus_tag=LIO31_RS03010;product=hypothetical protein;protein_id=WP_012775249.1;transl_table=11 NZ_CP085086.1 RefSeq gene 584991 586889 . + . ID=gene-LIO31_RS03015;Name=LIO31_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03015 NZ_CP085086.1 Protein Homology CDS 584991 586889 . + 0 ID=cds-WP_074389769.1;Parent=gene-LIO31_RS03015;Dbxref=Genbank:WP_074389769.1;Name=WP_074389769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736140.1;locus_tag=LIO31_RS03015;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_074389769.1;transl_table=11 NZ_CP085086.1 RefSeq gene 587336 587812 . + . ID=gene-LIO31_RS03020;Name=LIO31_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03020 NZ_CP085086.1 Protein Homology CDS 587336 587812 . + 0 ID=cds-WP_012775247.1;Parent=gene-LIO31_RS03020;Dbxref=Genbank:WP_012775247.1;Name=WP_012775247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775247.1;locus_tag=LIO31_RS03020;product=DUF3955 domain-containing protein;protein_id=WP_012775247.1;transl_table=11 NZ_CP085086.1 RefSeq gene 587814 588641 . + . ID=gene-LIO31_RS03025;Name=LIO31_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03025 NZ_CP085086.1 Protein Homology CDS 587814 588641 . + 0 ID=cds-WP_012027409.1;Parent=gene-LIO31_RS03025;Dbxref=Genbank:WP_012027409.1;Name=WP_012027409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027409.1;locus_tag=LIO31_RS03025;product=methyltransferase domain-containing protein;protein_id=WP_012027409.1;transl_table=11 NZ_CP085086.1 RefSeq gene 588781 589569 . - . ID=gene-LIO31_RS03030;Name=LIO31_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03030 NZ_CP085086.1 Protein Homology CDS 588781 589569 . - 0 ID=cds-WP_012027408.1;Parent=gene-LIO31_RS03030;Dbxref=Genbank:WP_012027408.1;Name=WP_012027408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638327.1;locus_tag=LIO31_RS03030;product=type 1 glutamine amidotransferase;protein_id=WP_012027408.1;transl_table=11 NZ_CP085086.1 RefSeq gene 589569 590912 . - . ID=gene-LIO31_RS03035;Name=LIO31_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03035 NZ_CP085086.1 Protein Homology CDS 589569 590912 . - 0 ID=cds-WP_074389770.1;Parent=gene-LIO31_RS03035;Dbxref=Genbank:WP_074389770.1;Name=WP_074389770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027407.1;locus_tag=LIO31_RS03035;product=Mur ligase family protein;protein_id=WP_074389770.1;transl_table=11 NZ_CP085086.1 RefSeq gene 591094 591945 . + . ID=gene-LIO31_RS03040;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=LIO31_RS03040 NZ_CP085086.1 Protein Homology CDS 591094 591945 . + 0 ID=cds-WP_012027406.1;Parent=gene-LIO31_RS03040;Dbxref=Genbank:WP_012027406.1;Name=WP_012027406.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027406.1;locus_tag=LIO31_RS03040;product=diadenylate cyclase CdaA;protein_id=WP_012027406.1;transl_table=11 NZ_CP085086.1 RefSeq gene 591938 592642 . + . ID=gene-LIO31_RS03045;Name=LIO31_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03045 NZ_CP085086.1 Protein Homology CDS 591938 592642 . + 0 ID=cds-WP_012775246.1;Parent=gene-LIO31_RS03045;Dbxref=Genbank:WP_012775246.1;Name=WP_012775246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935653.1;locus_tag=LIO31_RS03045;product=CdaR family protein;protein_id=WP_012775246.1;transl_table=11 NZ_CP085086.1 RefSeq gene 592655 594004 . + . ID=gene-LIO31_RS03050;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LIO31_RS03050 NZ_CP085086.1 Protein Homology CDS 592655 594004 . + 0 ID=cds-WP_012775245.1;Parent=gene-LIO31_RS03050;Dbxref=Genbank:WP_012775245.1;Name=WP_012775245.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775245.1;locus_tag=LIO31_RS03050;product=phosphoglucosamine mutase;protein_id=WP_012775245.1;transl_table=11 NZ_CP085086.1 RefSeq gene 594168 595712 . + . ID=gene-LIO31_RS03055;Name=LIO31_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03055 NZ_CP085086.1 Protein Homology CDS 594168 595712 . + 0 ID=cds-WP_012027403.1;Parent=gene-LIO31_RS03055;Dbxref=Genbank:WP_012027403.1;Name=WP_012027403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000025412.1;locus_tag=LIO31_RS03055;product=ATP-binding cassette domain-containing protein;protein_id=WP_012027403.1;transl_table=11 NZ_CP085086.1 RefSeq gene 595843 596619 . + . ID=gene-LIO31_RS03060;Name=LIO31_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03060 NZ_CP085086.1 Protein Homology CDS 595843 596619 . + 0 ID=cds-WP_012775244.1;Parent=gene-LIO31_RS03060;Dbxref=Genbank:WP_012775244.1;Name=WP_012775244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775244.1;locus_tag=LIO31_RS03060;product=class I SAM-dependent methyltransferase;protein_id=WP_012775244.1;transl_table=11 NZ_CP085086.1 RefSeq gene 596797 596994 . + . ID=gene-LIO31_RS03065;Name=LIO31_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03065 NZ_CP085086.1 Protein Homology CDS 596797 596994 . + 0 ID=cds-WP_226314464.1;Parent=gene-LIO31_RS03065;Dbxref=Genbank:WP_226314464.1;Name=WP_226314464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775243.1;locus_tag=LIO31_RS03065;product=hypothetical protein;protein_id=WP_226314464.1;transl_table=11 NZ_CP085086.1 RefSeq gene 597030 597167 . + . ID=gene-LIO31_RS03070;Name=LIO31_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03070 NZ_CP085086.1 Protein Homology CDS 597030 597167 . + 0 ID=cds-WP_012028370.1;Parent=gene-LIO31_RS03070;Dbxref=Genbank:WP_012028370.1;Name=WP_012028370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028370.1;locus_tag=LIO31_RS03070;product=hypothetical protein;protein_id=WP_012028370.1;transl_table=11 NZ_CP085086.1 RefSeq gene 597207 597575 . + . ID=gene-LIO31_RS03075;Name=LIO31_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03075 NZ_CP085086.1 Protein Homology CDS 597207 597575 . + 0 ID=cds-WP_012028369.1;Parent=gene-LIO31_RS03075;Dbxref=Genbank:WP_012028369.1;Name=WP_012028369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028369.1;locus_tag=LIO31_RS03075;product=hypothetical protein;protein_id=WP_012028369.1;transl_table=11 NZ_CP085086.1 RefSeq gene 597946 599151 . + . ID=gene-LIO31_RS03080;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=LIO31_RS03080 NZ_CP085086.1 Protein Homology CDS 597946 599151 . + 0 ID=cds-WP_014917280.1;Parent=gene-LIO31_RS03080;Dbxref=Genbank:WP_014917280.1;Name=WP_014917280.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935638.1;locus_tag=LIO31_RS03080;product=serine/threonine transporter SstT;protein_id=WP_014917280.1;transl_table=11 NZ_CP085086.1 RefSeq gene 599252 600652 . + . ID=gene-LIO31_RS03085;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=LIO31_RS03085 NZ_CP085086.1 Protein Homology CDS 599252 600652 . + 0 ID=cds-WP_024405979.1;Parent=gene-LIO31_RS03085;Dbxref=Genbank:WP_024405979.1;Name=WP_024405979.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pepV;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125034.1;locus_tag=LIO31_RS03085;product=dipeptidase PepV;protein_id=WP_024405979.1;transl_table=11 NZ_CP085086.1 RefSeq gene 600691 601149 . + . ID=gene-LIO31_RS03090;Name=LIO31_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03090 NZ_CP085086.1 Protein Homology CDS 600691 601149 . + 0 ID=cds-WP_024405978.1;Parent=gene-LIO31_RS03090;Dbxref=Genbank:WP_024405978.1;Name=WP_024405978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647079.1;locus_tag=LIO31_RS03090;product=GNAT family N-acetyltransferase;protein_id=WP_024405978.1;transl_table=11 NZ_CP085086.1 RefSeq gene 601136 601717 . + . ID=gene-LIO31_RS03095;Name=LIO31_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03095 NZ_CP085086.1 Protein Homology CDS 601136 601717 . + 0 ID=cds-WP_024405977.1;Parent=gene-LIO31_RS03095;Dbxref=Genbank:WP_024405977.1;Name=WP_024405977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078132.1;locus_tag=LIO31_RS03095;product=uracil-DNA glycosylase family protein;protein_id=WP_024405977.1;transl_table=11 NZ_CP085086.1 RefSeq gene 601786 602568 . + . ID=gene-LIO31_RS03100;Name=LIO31_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03100 NZ_CP085086.1 Protein Homology CDS 601786 602568 . + 0 ID=cds-WP_024405976.1;Parent=gene-LIO31_RS03100;Dbxref=Genbank:WP_024405976.1;Name=WP_024405976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775242.1;locus_tag=LIO31_RS03100;product=TPM domain-containing protein;protein_id=WP_024405976.1;transl_table=11 NZ_CP085086.1 RefSeq gene 602641 603222 . + . ID=gene-LIO31_RS03105;Name=LIO31_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03105 NZ_CP085086.1 Protein Homology CDS 602641 603222 . + 0 ID=cds-WP_024405975.1;Parent=gene-LIO31_RS03105;Dbxref=Genbank:WP_024405975.1;Name=WP_024405975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736125.1;locus_tag=LIO31_RS03105;product=LemA family protein;protein_id=WP_024405975.1;transl_table=11 NZ_CP085086.1 RefSeq gene 603234 604703 . + . ID=gene-LIO31_RS03110;Name=LIO31_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03110 NZ_CP085086.1 Protein Homology CDS 603234 604703 . + 0 ID=cds-WP_014638313.1;Parent=gene-LIO31_RS03110;Dbxref=Genbank:WP_014638313.1;Name=WP_014638313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027392.1;locus_tag=LIO31_RS03110;product=flotillin family protein;protein_id=WP_014638313.1;transl_table=11 NZ_CP085086.1 RefSeq gene 604786 605094 . + . ID=gene-LIO31_RS03115;Name=LIO31_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03115 NZ_CP085086.1 Protein Homology CDS 604786 605094 . + 0 ID=cds-WP_009910392.1;Parent=gene-LIO31_RS03115;Dbxref=Genbank:WP_009910392.1;Name=WP_009910392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910392.1;locus_tag=LIO31_RS03115;product=hypothetical protein;protein_id=WP_009910392.1;transl_table=11 NZ_CP085086.1 RefSeq gene 605216 606292 . - . ID=gene-LIO31_RS03120;Name=LIO31_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03120 NZ_CP085086.1 Protein Homology CDS 605216 606292 . - 0 ID=cds-WP_014636465.1;Parent=gene-LIO31_RS03120;Dbxref=Genbank:WP_014636465.1;Name=WP_014636465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647074.1;locus_tag=LIO31_RS03120;product=hypothetical protein;protein_id=WP_014636465.1;transl_table=11 NZ_CP085086.1 RefSeq gene 606404 607777 . - . ID=gene-LIO31_RS03125;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LIO31_RS03125 NZ_CP085086.1 Protein Homology CDS 606404 607777 . - 0 ID=cds-WP_012775650.1;Parent=gene-LIO31_RS03125;Dbxref=Genbank:WP_012775650.1;Name=WP_012775650.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906470.1;locus_tag=LIO31_RS03125;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_012775650.1;transl_table=11 NZ_CP085086.1 RefSeq gene 607836 608894 . - . ID=gene-LIO31_RS03130;Name=LIO31_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03130 NZ_CP085086.1 Protein Homology CDS 607836 608894 . - 0 ID=cds-WP_074412299.1;Parent=gene-LIO31_RS03130;Dbxref=Genbank:WP_074412299.1;Name=WP_074412299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LIO31_RS03130;product=site-specific integrase;protein_id=WP_074412299.1;transl_table=11 NZ_CP085086.1 RefSeq gene 609017 609841 . - . ID=gene-LIO31_RS03135;Name=LIO31_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03135 NZ_CP085086.1 GeneMarkS-2+ CDS 609017 609841 . - 0 ID=cds-WP_074412300.1;Parent=gene-LIO31_RS03135;Dbxref=Genbank:WP_074412300.1;Name=WP_074412300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03135;product=hypothetical protein;protein_id=WP_074412300.1;transl_table=11 NZ_CP085086.1 RefSeq gene 609856 610173 . - . ID=gene-LIO31_RS03140;Name=LIO31_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03140 NZ_CP085086.1 Protein Homology CDS 609856 610173 . - 0 ID=cds-WP_079267851.1;Parent=gene-LIO31_RS03140;Dbxref=Genbank:WP_079267851.1;Name=WP_079267851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166274.1;locus_tag=LIO31_RS03140;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_079267851.1;transl_table=11 NZ_CP085086.1 RefSeq gene 610220 610579 . - . ID=gene-LIO31_RS03145;Name=LIO31_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03145 NZ_CP085086.1 Protein Homology CDS 610220 610579 . - 0 ID=cds-WP_024387645.1;Parent=gene-LIO31_RS03145;Dbxref=Genbank:WP_024387645.1;Name=WP_024387645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493109.1;locus_tag=LIO31_RS03145;product=helix-turn-helix domain-containing protein;protein_id=WP_024387645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 610885 611076 . + . ID=gene-LIO31_RS03150;Name=LIO31_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03150 NZ_CP085086.1 Protein Homology CDS 610885 611076 . + 0 ID=cds-WP_074412301.1;Parent=gene-LIO31_RS03150;Dbxref=Genbank:WP_074412301.1;Name=WP_074412301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397650.1;locus_tag=LIO31_RS03150;product=hypothetical protein;protein_id=WP_074412301.1;transl_table=11 NZ_CP085086.1 RefSeq gene 611084 611587 . + . ID=gene-LIO31_RS03155;Name=LIO31_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03155 NZ_CP085086.1 GeneMarkS-2+ CDS 611084 611587 . + 0 ID=cds-WP_141666876.1;Parent=gene-LIO31_RS03155;Dbxref=Genbank:WP_141666876.1;Name=WP_141666876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03155;product=hypothetical protein;protein_id=WP_141666876.1;transl_table=11 NZ_CP085086.1 RefSeq gene 611602 611838 . + . ID=gene-LIO31_RS03160;Name=LIO31_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03160 NZ_CP085086.1 GeneMarkS-2+ CDS 611602 611838 . + 0 ID=cds-WP_074389229.1;Parent=gene-LIO31_RS03160;Dbxref=Genbank:WP_074389229.1;Name=WP_074389229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03160;product=hypothetical protein;protein_id=WP_074389229.1;transl_table=11 NZ_CP085086.1 RefSeq gene 611831 612109 . + . ID=gene-LIO31_RS03165;Name=LIO31_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03165 NZ_CP085086.1 Protein Homology CDS 611831 612109 . + 0 ID=cds-WP_074412303.1;Parent=gene-LIO31_RS03165;Dbxref=Genbank:WP_074412303.1;Name=WP_074412303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736115.1;locus_tag=LIO31_RS03165;product=DNA-binding protein;protein_id=WP_074412303.1;transl_table=11 NZ_CP085086.1 RefSeq gene 612152 612487 . + . ID=gene-LIO31_RS03170;Name=LIO31_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03170 NZ_CP085086.1 Protein Homology CDS 612152 612487 . + 0 ID=cds-WP_074412304.1;Parent=gene-LIO31_RS03170;Dbxref=Genbank:WP_074412304.1;Name=WP_074412304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001163843.1;locus_tag=LIO31_RS03170;product=transcriptional regulator;protein_id=WP_074412304.1;transl_table=11 NZ_CP085086.1 RefSeq gene 612729 613508 . + . ID=gene-LIO31_RS03175;Name=LIO31_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03175 NZ_CP085086.1 Protein Homology CDS 612729 613508 . + 0 ID=cds-WP_074412305.1;Parent=gene-LIO31_RS03175;Dbxref=Genbank:WP_074412305.1;Name=WP_074412305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056933.1;locus_tag=LIO31_RS03175;product=ParB N-terminal domain-containing protein;protein_id=WP_074412305.1;transl_table=11 NZ_CP085086.1 RefSeq gene 613522 614226 . + . ID=gene-LIO31_RS03180;Name=LIO31_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03180 NZ_CP085086.1 Protein Homology CDS 613522 614226 . + 0 ID=cds-WP_074412306.1;Parent=gene-LIO31_RS03180;Dbxref=Genbank:WP_074412306.1;Name=WP_074412306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056207.1;locus_tag=LIO31_RS03180;product=ERF family protein;protein_id=WP_074412306.1;transl_table=11 NZ_CP085086.1 RefSeq gene 614236 615297 . + . ID=gene-LIO31_RS03185;Name=LIO31_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03185 NZ_CP085086.1 Protein Homology CDS 614236 615297 . + 0 ID=cds-WP_074412307.1;Parent=gene-LIO31_RS03185;Dbxref=Genbank:WP_074412307.1;Name=WP_074412307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056205.1;locus_tag=LIO31_RS03185;product=DUF1351 domain-containing protein;protein_id=WP_074412307.1;transl_table=11 NZ_CP085086.1 RefSeq gene 615287 615820 . + . ID=gene-LIO31_RS03190;Name=LIO31_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03190 NZ_CP085086.1 Protein Homology CDS 615287 615820 . + 0 ID=cds-WP_074412308.1;Parent=gene-LIO31_RS03190;Dbxref=Genbank:WP_074412308.1;Name=WP_074412308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736109.1;locus_tag=LIO31_RS03190;product=MazG-like family protein;protein_id=WP_074412308.1;transl_table=11 NZ_CP085086.1 RefSeq gene 615820 615996 . + . ID=gene-LIO31_RS03195;Name=LIO31_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03195 NZ_CP085086.1 GeneMarkS-2+ CDS 615820 615996 . + 0 ID=cds-WP_171841111.1;Parent=gene-LIO31_RS03195;Dbxref=Genbank:WP_171841111.1;Name=WP_171841111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03195;product=hypothetical protein;protein_id=WP_171841111.1;transl_table=11 NZ_CP085086.1 RefSeq gene 615986 616519 . + . ID=gene-LIO31_RS03200;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=LIO31_RS03200 NZ_CP085086.1 Protein Homology CDS 615986 616519 . + 0 ID=cds-WP_074412309.1;Parent=gene-LIO31_RS03200;Dbxref=Genbank:WP_074412309.1;Name=WP_074412309.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609607.1;locus_tag=LIO31_RS03200;product=single-stranded DNA-binding protein;protein_id=WP_074412309.1;transl_table=11 NZ_CP085086.1 RefSeq gene 616535 616813 . + . ID=gene-LIO31_RS03205;Name=LIO31_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03205 NZ_CP085086.1 Protein Homology CDS 616535 616813 . + 0 ID=cds-WP_029752020.1;Parent=gene-LIO31_RS03205;Dbxref=Genbank:WP_029752020.1;Name=WP_029752020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017766997.1;locus_tag=LIO31_RS03205;product=hypothetical protein;protein_id=WP_029752020.1;transl_table=11 NZ_CP085086.1 RefSeq gene 616823 617602 . + . ID=gene-LIO31_RS03210;Name=LIO31_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03210 NZ_CP085086.1 Protein Homology CDS 616823 617602 . + 0 ID=cds-WP_105130532.1;Parent=gene-LIO31_RS03210;Dbxref=Genbank:WP_105130532.1;Name=WP_105130532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012897651.1;locus_tag=LIO31_RS03210;product=DNA methyltransferase;protein_id=WP_105130532.1;transl_table=11 NZ_CP085086.1 RefSeq gene 617799 618278 . + . ID=gene-LIO31_RS03215;Name=LIO31_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03215 NZ_CP085086.1 Protein Homology CDS 617799 618278 . + 0 ID=cds-WP_074412311.1;Parent=gene-LIO31_RS03215;Dbxref=Genbank:WP_074412311.1;Name=WP_074412311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039279.1;locus_tag=LIO31_RS03215;product=helix-turn-helix transcriptional regulator;protein_id=WP_074412311.1;transl_table=11 NZ_CP085086.1 RefSeq gene 618291 618728 . + . ID=gene-LIO31_RS03220;Name=LIO31_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03220 NZ_CP085086.1 Protein Homology CDS 618291 618728 . + 0 ID=cds-WP_024383995.1;Parent=gene-LIO31_RS03220;Dbxref=Genbank:WP_024383995.1;Name=WP_024383995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368354.1;locus_tag=LIO31_RS03220;product=hypothetical protein;protein_id=WP_024383995.1;transl_table=11 NZ_CP085086.1 RefSeq gene 618730 619464 . + . ID=gene-LIO31_RS03225;Name=LIO31_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03225 NZ_CP085086.1 Protein Homology CDS 618730 619464 . + 0 ID=cds-WP_024410599.1;Parent=gene-LIO31_RS03225;Dbxref=Genbank:WP_024410599.1;Name=WP_024410599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368355.1;locus_tag=LIO31_RS03225;product=hypothetical protein;protein_id=WP_024410599.1;transl_table=11 NZ_CP085086.1 RefSeq gene 619485 619859 . + . ID=gene-LIO31_RS03230;Name=LIO31_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03230 NZ_CP085086.1 Protein Homology CDS 619485 619859 . + 0 ID=cds-WP_044767986.1;Parent=gene-LIO31_RS03230;Dbxref=Genbank:WP_044767986.1;Name=WP_044767986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767687.1;locus_tag=LIO31_RS03230;product=hypothetical protein;protein_id=WP_044767986.1;transl_table=11 NZ_CP085086.1 RefSeq gene 620054 620905 . + . ID=gene-LIO31_RS03235;Name=LIO31_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03235 NZ_CP085086.1 Protein Homology CDS 620054 620905 . + 0 ID=cds-WP_074392407.1;Parent=gene-LIO31_RS03235;Dbxref=Genbank:WP_074392407.1;Name=WP_074392407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736102.1;locus_tag=LIO31_RS03235;product=prohibitin family protein;protein_id=WP_074392407.1;transl_table=11 NZ_CP085086.1 RefSeq gene 620906 621208 . + . ID=gene-LIO31_RS03240;Name=LIO31_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03240 NZ_CP085086.1 Protein Homology CDS 620906 621208 . + 0 ID=cds-WP_014736101.1;Parent=gene-LIO31_RS03240;Dbxref=Genbank:WP_014736101.1;Name=WP_014736101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767684.1;locus_tag=LIO31_RS03240;product=DUF1372 family protein;protein_id=WP_014736101.1;transl_table=11 NZ_CP085086.1 RefSeq gene 621209 621439 . + . ID=gene-LIO31_RS03245;Name=LIO31_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03245 NZ_CP085086.1 GeneMarkS-2+ CDS 621209 621439 . + 0 ID=cds-WP_014736100.1;Parent=gene-LIO31_RS03245;Dbxref=Genbank:WP_014736100.1;Name=WP_014736100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03245;product=hypothetical protein;protein_id=WP_014736100.1;transl_table=11 NZ_CP085086.1 RefSeq gene 621432 621662 . + . ID=gene-LIO31_RS03250;Name=LIO31_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03250 NZ_CP085086.1 Protein Homology CDS 621432 621662 . + 0 ID=cds-WP_074412312.1;Parent=gene-LIO31_RS03250;Dbxref=Genbank:WP_074412312.1;Name=WP_074412312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056191.1;locus_tag=LIO31_RS03250;product=hypothetical protein;protein_id=WP_074412312.1;transl_table=11 NZ_CP085086.1 RefSeq gene 621659 622069 . + . ID=gene-LIO31_RS03255;Name=LIO31_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03255 NZ_CP085086.1 Protein Homology CDS 621659 622069 . + 0 ID=cds-WP_074412313.1;Parent=gene-LIO31_RS03255;Dbxref=Genbank:WP_074412313.1;Name=WP_074412313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038171.1;locus_tag=LIO31_RS03255;product=endodeoxyribonuclease RusA;protein_id=WP_074412313.1;transl_table=11 NZ_CP085086.1 RefSeq gene 622062 622298 . + . ID=gene-LIO31_RS03260;Name=LIO31_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03260 NZ_CP085086.1 GeneMarkS-2+ CDS 622062 622298 . + 0 ID=cds-WP_074412314.1;Parent=gene-LIO31_RS03260;Dbxref=Genbank:WP_074412314.1;Name=WP_074412314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03260;product=hypothetical protein;protein_id=WP_074412314.1;transl_table=11 NZ_CP085086.1 RefSeq gene 622299 622679 . + . ID=gene-LIO31_RS03265;Name=LIO31_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03265 NZ_CP085086.1 Protein Homology CDS 622299 622679 . + 0 ID=cds-WP_024384004.1;Parent=gene-LIO31_RS03265;Dbxref=Genbank:WP_024384004.1;Name=WP_024384004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039160.1;locus_tag=LIO31_RS03265;product=hypothetical protein;protein_id=WP_024384004.1;transl_table=11 NZ_CP085086.1 RefSeq gene 622748 623419 . + . ID=gene-LIO31_RS03270;Name=LIO31_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03270 NZ_CP085086.1 Protein Homology CDS 622748 623419 . + 0 ID=cds-WP_074412315.1;Parent=gene-LIO31_RS03270;Dbxref=Genbank:WP_074412315.1;Name=WP_074412315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736096.1;locus_tag=LIO31_RS03270;product=DUF4417 domain-containing protein;protein_id=WP_074412315.1;transl_table=11 NZ_CP085086.1 RefSeq gene 623416 623799 . + . ID=gene-LIO31_RS03275;Name=LIO31_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03275 NZ_CP085086.1 Protein Homology CDS 623416 623799 . + 0 ID=cds-WP_014736095.1;Parent=gene-LIO31_RS03275;Dbxref=Genbank:WP_014736095.1;Name=WP_014736095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039031.1;locus_tag=LIO31_RS03275;product=hypothetical protein;protein_id=WP_014736095.1;transl_table=11 NZ_CP085086.1 RefSeq gene 623991 624470 . + . ID=gene-LIO31_RS03280;Name=LIO31_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03280 NZ_CP085086.1 Protein Homology CDS 623991 624470 . + 0 ID=cds-WP_044767977.1;Parent=gene-LIO31_RS03280;Dbxref=Genbank:WP_044767977.1;Name=WP_044767977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056185.1;locus_tag=LIO31_RS03280;product=terminase small subunit;protein_id=WP_044767977.1;transl_table=11 NZ_CP085086.1 RefSeq gene 624457 625770 . + . ID=gene-LIO31_RS03285;Name=LIO31_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03285 NZ_CP085086.1 Protein Homology CDS 624457 625770 . + 0 ID=cds-WP_074412316.1;Parent=gene-LIO31_RS03285;Dbxref=Genbank:WP_074412316.1;Name=WP_074412316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056184.1;locus_tag=LIO31_RS03285;product=PBSX family phage terminase large subunit;protein_id=WP_074412316.1;transl_table=11 NZ_CP085086.1 RefSeq gene 625782 627371 . + . ID=gene-LIO31_RS03290;Name=LIO31_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03290 NZ_CP085086.1 Protein Homology CDS 625782 627371 . + 0 ID=cds-WP_074412317.1;Parent=gene-LIO31_RS03290;Dbxref=Genbank:WP_074412317.1;Name=WP_074412317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736092.1;locus_tag=LIO31_RS03290;product=phage portal protein;protein_id=WP_074412317.1;transl_table=11 NZ_CP085086.1 RefSeq gene 627358 627612 . + . ID=gene-LIO31_RS03295;Name=LIO31_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03295 NZ_CP085086.1 Protein Homology CDS 627358 627612 . + 0 ID=cds-WP_074412318.1;Parent=gene-LIO31_RS03295;Dbxref=Genbank:WP_074412318.1;Name=WP_074412318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170496.1;locus_tag=LIO31_RS03295;product=hypothetical protein;protein_id=WP_074412318.1;transl_table=11 NZ_CP085086.1 RefSeq gene 627615 628766 . + . ID=gene-LIO31_RS03300;Name=LIO31_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03300 NZ_CP085086.1 Protein Homology CDS 627615 628766 . + 0 ID=cds-WP_074412319.1;Parent=gene-LIO31_RS03300;Dbxref=Genbank:WP_074412319.1;Name=WP_074412319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140093.1;locus_tag=LIO31_RS03300;product=phage minor capsid protein;protein_id=WP_074412319.1;transl_table=11 NZ_CP085086.1 RefSeq gene 628913 629530 . + . ID=gene-LIO31_RS03305;Name=LIO31_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03305 NZ_CP085086.1 Protein Homology CDS 628913 629530 . + 0 ID=cds-WP_074412320.1;Parent=gene-LIO31_RS03305;Dbxref=Genbank:WP_074412320.1;Name=WP_074412320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056181.1;locus_tag=LIO31_RS03305;product=phage scaffolding protein;protein_id=WP_074412320.1;transl_table=11 NZ_CP085086.1 RefSeq gene 629534 630373 . + . ID=gene-LIO31_RS03310;Name=LIO31_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03310 NZ_CP085086.1 Protein Homology CDS 629534 630373 . + 0 ID=cds-WP_016056180.1;Parent=gene-LIO31_RS03310;Dbxref=Genbank:WP_016056180.1;Name=WP_016056180.1;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194849.1;locus_tag=LIO31_RS03310;product=N4-gp56 family major capsid protein;protein_id=WP_016056180.1;transl_table=11 NZ_CP085086.1 RefSeq gene 630373 630558 . + . ID=gene-LIO31_RS03315;Name=LIO31_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03315 NZ_CP085086.1 Protein Homology CDS 630373 630558 . + 0 ID=cds-WP_074412321.1;Parent=gene-LIO31_RS03315;Dbxref=Genbank:WP_074412321.1;Name=WP_074412321.1;Ontology_term=GO:0006353;gbkey=CDS;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056179.1;locus_tag=LIO31_RS03315;product=Rho termination factor N-terminal domain-containing protein;protein_id=WP_074412321.1;transl_table=11 NZ_CP085086.1 RefSeq gene 630536 630763 . + . ID=gene-LIO31_RS03320;Name=LIO31_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03320 NZ_CP085086.1 Protein Homology CDS 630536 630763 . + 0 ID=cds-WP_024410586.1;Parent=gene-LIO31_RS03320;Dbxref=Genbank:WP_024410586.1;Name=WP_024410586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056178.1;locus_tag=LIO31_RS03320;product=hypothetical protein;protein_id=WP_024410586.1;transl_table=11 NZ_CP085086.1 RefSeq gene 630805 631200 . + . ID=gene-LIO31_RS03325;Name=LIO31_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03325 NZ_CP085086.1 Protein Homology CDS 630805 631200 . + 0 ID=cds-WP_074412322.1;Parent=gene-LIO31_RS03325;Dbxref=Genbank:WP_074412322.1;Name=WP_074412322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013794407.1;locus_tag=LIO31_RS03325;product=hypothetical protein;protein_id=WP_074412322.1;transl_table=11 NZ_CP085086.1 RefSeq gene 631190 631516 . + . ID=gene-LIO31_RS03330;Name=LIO31_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03330 NZ_CP085086.1 Protein Homology CDS 631190 631516 . + 0 ID=cds-WP_014736085.1;Parent=gene-LIO31_RS03330;Dbxref=Genbank:WP_014736085.1;Name=WP_014736085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058505.1;locus_tag=LIO31_RS03330;product=putative minor capsid protein;protein_id=WP_014736085.1;transl_table=11 NZ_CP085086.1 RefSeq gene 631516 631866 . + . ID=gene-LIO31_RS03335;Name=LIO31_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03335 NZ_CP085086.1 Protein Homology CDS 631516 631866 . + 0 ID=cds-WP_074412323.1;Parent=gene-LIO31_RS03335;Dbxref=Genbank:WP_074412323.1;Name=WP_074412323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039003.1;locus_tag=LIO31_RS03335;product=minor capsid protein;protein_id=WP_074412323.1;transl_table=11 NZ_CP085086.1 RefSeq gene 631866 632273 . + . ID=gene-LIO31_RS03340;Name=LIO31_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03340 NZ_CP085086.1 Protein Homology CDS 631866 632273 . + 0 ID=cds-WP_074412324.1;Parent=gene-LIO31_RS03340;Dbxref=Genbank:WP_074412324.1;Name=WP_074412324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058570.1;locus_tag=LIO31_RS03340;product=minor capsid protein;protein_id=WP_074412324.1;transl_table=11 NZ_CP085086.1 RefSeq gene 632278 632736 . + . ID=gene-LIO31_RS03345;Name=LIO31_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03345 NZ_CP085086.1 Protein Homology CDS 632278 632736 . + 0 ID=cds-WP_014736082.1;Parent=gene-LIO31_RS03345;Dbxref=Genbank:WP_014736082.1;Name=WP_014736082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056173.1;locus_tag=LIO31_RS03345;product=hypothetical protein;protein_id=WP_014736082.1;transl_table=11 NZ_CP085086.1 RefSeq gene 632759 633127 . + . ID=gene-LIO31_RS03350;Name=LIO31_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03350 NZ_CP085086.1 Protein Homology CDS 632759 633127 . + 0 ID=cds-WP_029751986.1;Parent=gene-LIO31_RS03350;Dbxref=Genbank:WP_029751986.1;Name=WP_029751986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069049.1;locus_tag=LIO31_RS03350;product=hypothetical protein;protein_id=WP_029751986.1;transl_table=11 NZ_CP085086.1 RefSeq gene 633127 633714 . + . ID=gene-LIO31_RS03355;Name=LIO31_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03355 NZ_CP085086.1 Protein Homology CDS 633127 633714 . + 0 ID=cds-WP_074412325.1;Parent=gene-LIO31_RS03355;Dbxref=Genbank:WP_074412325.1;Name=WP_074412325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003058588.1;locus_tag=LIO31_RS03355;product=Gp15 family bacteriophage protein;protein_id=WP_074412325.1;transl_table=11 NZ_CP085086.1 RefSeq gene 633734 637096 . + . ID=gene-LIO31_RS03360;Name=LIO31_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03360 NZ_CP085086.1 Protein Homology CDS 633734 637096 . + 0 ID=cds-WP_074412326.1;Parent=gene-LIO31_RS03360;Dbxref=Genbank:WP_074412326.1;Name=WP_074412326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736080.1;locus_tag=LIO31_RS03360;product=hypothetical protein;protein_id=WP_074412326.1;transl_table=11 NZ_CP085086.1 RefSeq gene 637093 638595 . + . ID=gene-LIO31_RS03365;Name=LIO31_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03365 NZ_CP085086.1 Protein Homology CDS 637093 638595 . + 0 ID=cds-WP_074412327.1;Parent=gene-LIO31_RS03365;Dbxref=Genbank:WP_074412327.1;Name=WP_074412327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056168.1;locus_tag=LIO31_RS03365;product=phage tail family protein;protein_id=WP_074412327.1;transl_table=11 NZ_CP085086.1 RefSeq gene 638595 642437 . + . ID=gene-LIO31_RS03370;Name=LIO31_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03370 NZ_CP085086.1 Protein Homology CDS 638595 642437 . + 0 ID=cds-WP_226960927.1;Parent=gene-LIO31_RS03370;Dbxref=Genbank:WP_226960927.1;Name=WP_226960927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056167.1;locus_tag=LIO31_RS03370;product=phage tail protein;protein_id=WP_226960927.1;transl_table=11 NZ_CP085086.1 RefSeq gene 642451 644505 . + . ID=gene-LIO31_RS03375;Name=LIO31_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03375 NZ_CP085086.1 Protein Homology CDS 642451 644505 . + 0 ID=cds-WP_074412329.1;Parent=gene-LIO31_RS03375;Dbxref=Genbank:WP_074412329.1;Name=WP_074412329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736077.1;locus_tag=LIO31_RS03375;product=DUF859 family phage minor structural protein;protein_id=WP_074412329.1;transl_table=11 NZ_CP085086.1 RefSeq gene 644567 644830 . + . ID=gene-LIO31_RS03380;Name=LIO31_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03380 NZ_CP085086.1 Protein Homology CDS 644567 644830 . + 0 ID=cds-WP_024410576.1;Parent=gene-LIO31_RS03380;Dbxref=Genbank:WP_024410576.1;Name=WP_024410576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922101.1;locus_tag=LIO31_RS03380;product=hypothetical protein;protein_id=WP_024410576.1;transl_table=11 NZ_CP085086.1 RefSeq gene 644855 645298 . + . ID=gene-LIO31_RS03385;Name=LIO31_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03385 NZ_CP085086.1 Protein Homology CDS 644855 645298 . + 0 ID=cds-WP_217452366.1;Parent=gene-LIO31_RS03385;Dbxref=Genbank:WP_217452366.1;Name=WP_217452366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056164.1;locus_tag=LIO31_RS03385;product=hypothetical protein;protein_id=WP_217452366.1;transl_table=11 NZ_CP085086.1 RefSeq gene 645273 645476 . + . ID=gene-LIO31_RS03390;Name=LIO31_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03390 NZ_CP085086.1 Protein Homology CDS 645273 645476 . + 0 ID=cds-WP_029751977.1;Parent=gene-LIO31_RS03390;Dbxref=Genbank:WP_029751977.1;Name=WP_029751977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056163.1;locus_tag=LIO31_RS03390;product=holin;protein_id=WP_029751977.1;transl_table=11 NZ_CP085086.1 RefSeq gene 645606 646316 . + . ID=gene-LIO31_RS03395;Name=LIO31_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03395 NZ_CP085086.1 Protein Homology CDS 645606 646316 . + 0 ID=cds-WP_074412330.1;Parent=gene-LIO31_RS03395;Dbxref=Genbank:WP_074412330.1;Name=WP_074412330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016056162.1;locus_tag=LIO31_RS03395;product=SH3 domain-containing protein;protein_id=WP_074412330.1;transl_table=11 NZ_CP085086.1 RefSeq gene 646800 649124 . + . ID=gene-LIO31_RS03400;Name=LIO31_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03400 NZ_CP085086.1 Protein Homology CDS 646800 649124 . + 0 ID=cds-WP_012027389.1;Parent=gene-LIO31_RS03400;Dbxref=Genbank:WP_012027389.1;Name=WP_012027389.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646814.1;locus_tag=LIO31_RS03400;product=DEAD/DEAH box helicase family protein;protein_id=WP_012027389.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 649148 650218 . + . ID=gene-LIO31_RS03405;Name=LIO31_RS03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03405;partial=true;pseudo=true;start_range=.,649148 NZ_CP085086.1 Protein Homology CDS 649148 650218 . + 0 ID=cds-LIO31_RS03405;Parent=gene-LIO31_RS03405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029054.1;locus_tag=LIO31_RS03405;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,649148;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 650218 650880 . + . ID=gene-LIO31_RS03410;Name=LIO31_RS03410;end_range=650880,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03410;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 650218 650880 . + 0 ID=cds-LIO31_RS03410;Parent=gene-LIO31_RS03410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677;end_range=650880,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027386.1;locus_tag=LIO31_RS03410;partial=true;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 650852 652156 . - . ID=gene-LIO31_RS03415;Name=LIO31_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03415 NZ_CP085086.1 Protein Homology CDS 650852 652156 . - 0 ID=cds-WP_029750578.1;Parent=gene-LIO31_RS03415;Dbxref=Genbank:WP_029750578.1;Name=WP_029750578.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027386.1;locus_tag=LIO31_RS03415;product=restriction endonuclease subunit S;protein_id=WP_029750578.1;transl_table=11 NZ_CP085086.1 RefSeq gene 652369 653043 . + . ID=gene-LIO31_RS03420;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LIO31_RS03420 NZ_CP085086.1 Protein Homology CDS 652369 653043 . + 0 ID=cds-WP_012027385.1;Parent=gene-LIO31_RS03420;Dbxref=Genbank:WP_012027385.1;Name=WP_012027385.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027385.1;locus_tag=LIO31_RS03420;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_012027385.1;transl_table=11 NZ_CP085086.1 RefSeq gene 653372 654583 . + . ID=gene-LIO31_RS03425;Name=LIO31_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03425 NZ_CP085086.1 Protein Homology CDS 653372 654583 . + 0 ID=cds-WP_074389369.1;Parent=gene-LIO31_RS03425;Dbxref=Genbank:WP_074389369.1;Name=WP_074389369.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027384.1;locus_tag=LIO31_RS03425;product=phosphopentomutase;protein_id=WP_074389369.1;transl_table=11 NZ_CP085086.1 RefSeq gene 654583 654939 . + . ID=gene-LIO31_RS03430;Name=LIO31_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03430 NZ_CP085086.1 Protein Homology CDS 654583 654939 . + 0 ID=cds-WP_074389368.1;Parent=gene-LIO31_RS03430;Dbxref=Genbank:WP_074389368.1;Name=WP_074389368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935587.1;locus_tag=LIO31_RS03430;product=ArsC family transcriptional regulator;protein_id=WP_074389368.1;transl_table=11 NZ_CP085086.1 RefSeq gene 654951 655760 . + . ID=gene-LIO31_RS03435;Name=LIO31_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03435 NZ_CP085086.1 Protein Homology CDS 654951 655760 . + 0 ID=cds-WP_014638303.1;Parent=gene-LIO31_RS03435;Dbxref=Genbank:WP_014638303.1;Name=WP_014638303.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647060.1;locus_tag=LIO31_RS03435;product=purine-nucleoside phosphorylase;protein_id=WP_014638303.1;transl_table=11 NZ_CP085086.1 RefSeq gene 655793 656506 . + . ID=gene-LIO31_RS03440;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=LIO31_RS03440 NZ_CP085086.1 Protein Homology CDS 655793 656506 . + 0 ID=cds-WP_024405969.1;Parent=gene-LIO31_RS03440;Dbxref=Genbank:WP_024405969.1;Name=WP_024405969.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007519526.1;locus_tag=LIO31_RS03440;product=purine-nucleoside phosphorylase;protein_id=WP_024405969.1;transl_table=11 NZ_CP085086.1 RefSeq gene 656682 658949 . + . ID=gene-LIO31_RS03445;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=LIO31_RS03445 NZ_CP085086.1 Protein Homology CDS 656682 658949 . + 0 ID=cds-WP_024385983.1;Parent=gene-LIO31_RS03445;Dbxref=Genbank:WP_024385983.1;Name=WP_024385983.1;Ontology_term=GO:0005977,GO:0004645;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=glycogen metabolic process|0005977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647058.1;locus_tag=LIO31_RS03445;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_024385983.1;transl_table=11 NZ_CP085086.1 RefSeq gene 659084 659662 . - . ID=gene-LIO31_RS03450;Name=LIO31_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03450 NZ_CP085086.1 Protein Homology CDS 659084 659662 . - 0 ID=cds-WP_074389366.1;Parent=gene-LIO31_RS03450;Dbxref=Genbank:WP_074389366.1;Name=WP_074389366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647057.1;locus_tag=LIO31_RS03450;product=VanZ family protein;protein_id=WP_074389366.1;transl_table=11 NZ_CP085086.1 RefSeq gene 659775 660911 . + . ID=gene-LIO31_RS03455;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LIO31_RS03455 NZ_CP085086.1 Protein Homology CDS 659775 660911 . + 0 ID=cds-WP_024405968.1;Parent=gene-LIO31_RS03455;Dbxref=Genbank:WP_024405968.1;Name=WP_024405968.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003092450.1;locus_tag=LIO31_RS03455;product=radical SAM family heme chaperone HemW;protein_id=WP_024405968.1;transl_table=11 NZ_CP085086.1 RefSeq gene 660924 661664 . + . ID=gene-LIO31_RS03460;Name=LIO31_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03460 NZ_CP085086.1 Protein Homology CDS 660924 661664 . + 0 ID=cds-WP_024405967.1;Parent=gene-LIO31_RS03460;Dbxref=Genbank:WP_024405967.1;Name=WP_024405967.1;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647055.1;locus_tag=LIO31_RS03460;product=thioesterase;protein_id=WP_024405967.1;transl_table=11 NZ_CP085086.1 RefSeq gene 661651 662268 . + . ID=gene-LIO31_RS03465;Name=LIO31_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03465 NZ_CP085086.1 Protein Homology CDS 661651 662268 . + 0 ID=cds-WP_024405966.1;Parent=gene-LIO31_RS03465;Dbxref=Genbank:WP_024405966.1;Name=WP_024405966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647054.1;locus_tag=LIO31_RS03465;product=NUDIX hydrolase;protein_id=WP_024405966.1;transl_table=11 NZ_CP085086.1 RefSeq gene 662278 663051 . + . ID=gene-LIO31_RS03470;Name=LIO31_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03470 NZ_CP085086.1 Protein Homology CDS 662278 663051 . + 0 ID=cds-WP_012028356.1;Parent=gene-LIO31_RS03470;Dbxref=Genbank:WP_012028356.1;Name=WP_012028356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942987.1;locus_tag=LIO31_RS03470;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_012028356.1;transl_table=11 NZ_CP085086.1 RefSeq gene 663041 663670 . + . ID=gene-LIO31_RS03475;Name=LIO31_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03475 NZ_CP085086.1 Protein Homology CDS 663041 663670 . + 0 ID=cds-WP_024405965.1;Parent=gene-LIO31_RS03475;Dbxref=Genbank:WP_024405965.1;Name=WP_024405965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942989.1;locus_tag=LIO31_RS03475;product=TIGR01906 family membrane protein;protein_id=WP_024405965.1;transl_table=11 NZ_CP085086.1 RefSeq gene 663733 663945 . + . ID=gene-LIO31_RS03480;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LIO31_RS03480 NZ_CP085086.1 Protein Homology CDS 663733 663945 . + 0 ID=cds-WP_211195007.1;Parent=gene-LIO31_RS03480;Dbxref=Genbank:WP_211195007.1;Name=WP_211195007.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011684.1;locus_tag=LIO31_RS03480;product=30S ribosomal protein S21;protein_id=WP_211195007.1;transl_table=11 NZ_CP085086.1 RefSeq gene 664049 665062 . + . ID=gene-LIO31_RS03485;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LIO31_RS03485 NZ_CP085086.1 Protein Homology CDS 664049 665062 . + 0 ID=cds-WP_012775237.1;Parent=gene-LIO31_RS03485;Dbxref=Genbank:WP_012775237.1;Name=WP_012775237.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736056.1;locus_tag=LIO31_RS03485;product=UDP-glucose 4-epimerase GalE;protein_id=WP_012775237.1;transl_table=11 NZ_CP085086.1 RefSeq gene 665153 665518 . - . ID=gene-LIO31_RS03490;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LIO31_RS03490 NZ_CP085086.1 Protein Homology CDS 665153 665518 . - 0 ID=cds-WP_002935562.1;Parent=gene-LIO31_RS03490;Dbxref=Genbank:WP_002935562.1;Name=WP_002935562.1;Ontology_term=GO:0006810,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730437.1;locus_tag=LIO31_RS03490;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_002935562.1;transl_table=11 NZ_CP085086.1 RefSeq gene 665700 667490 . + . ID=gene-LIO31_RS03495;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LIO31_RS03495 NZ_CP085086.1 Protein Homology CDS 665700 667490 . + 0 ID=cds-WP_012775236.1;Parent=gene-LIO31_RS03495;Dbxref=Genbank:WP_012775236.1;Name=WP_012775236.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027366.1;locus_tag=LIO31_RS03495;product=DNA primase;protein_id=WP_012775236.1;transl_table=11 NZ_CP085086.1 RefSeq gene 667493 668611 . + . ID=gene-LIO31_RS03500;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LIO31_RS03500 NZ_CP085086.1 Protein Homology CDS 667493 668611 . + 0 ID=cds-WP_002935555.1;Parent=gene-LIO31_RS03500;Dbxref=Genbank:WP_002935555.1;Name=WP_002935555.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910370.1;locus_tag=LIO31_RS03500;product=RNA polymerase sigma factor RpoD;protein_id=WP_002935555.1;transl_table=11 NZ_CP085086.1 RefSeq gene 668780 669103 . + . ID=gene-LIO31_RS03505;Name=LIO31_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03505 NZ_CP085086.1 Protein Homology CDS 668780 669103 . + 0 ID=cds-WP_002935553.1;Parent=gene-LIO31_RS03505;Dbxref=Genbank:WP_002935553.1;Name=WP_002935553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942999.1;locus_tag=LIO31_RS03505;product=metal-sulfur cluster assembly factor;protein_id=WP_002935553.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 669284 669441 . + . ID=gene-LIO31_RS03510;Name=LIO31_RS03510;end_range=669441,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03510;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 669284 669441 . + 0 ID=cds-LIO31_RS03510;Parent=gene-LIO31_RS03510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=669441,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775157.1;locus_tag=LIO31_RS03510;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 669528 670658 . - . ID=gene-LIO31_RS03515;Name=LIO31_RS03515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03515;pseudo=true NZ_CP085086.1 Protein Homology CDS 669528 670658 . - 0 ID=cds-LIO31_RS03515;Parent=gene-LIO31_RS03515;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000564846.1;locus_tag=LIO31_RS03515;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 670754 671077 . + . ID=gene-LIO31_RS03520;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LIO31_RS03520;partial=true;pseudo=true;start_range=.,670754 NZ_CP085086.1 Protein Homology CDS 670754 671077 . + 0 ID=cds-LIO31_RS03520;Parent=gene-LIO31_RS03520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=LIO31_RS03520;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,670754;transl_table=11 NZ_CP085086.1 RefSeq gene 671217 671810 . - . ID=gene-LIO31_RS03525;Name=LIO31_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03525 NZ_CP085086.1 Protein Homology CDS 671217 671810 . - 0 ID=cds-WP_002935545.1;Parent=gene-LIO31_RS03525;Dbxref=Genbank:WP_002935545.1;Name=WP_002935545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736049.1;locus_tag=LIO31_RS03525;product=TVP38/TMEM64 family protein;protein_id=WP_002935545.1;transl_table=11 NZ_CP085086.1 RefSeq gene 671920 672273 . + . ID=gene-LIO31_RS03530;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LIO31_RS03530 NZ_CP085086.1 cmsearch tmRNA 671920 672273 . + . ID=rna-LIO31_RS03530;Parent=gene-LIO31_RS03530;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS03530;product=transfer-messenger RNA NZ_CP085086.1 cmsearch exon 671920 672273 . + . ID=exon-LIO31_RS03530-1;Parent=rna-LIO31_RS03530;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS03530;product=transfer-messenger RNA NZ_CP085086.1 RefSeq gene 672276 672363 . + . ID=gene-LIO31_RS03535;Name=LIO31_RS03535;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS03535 NZ_CP085086.1 tRNAscan-SE tRNA 672276 672363 . + . ID=rna-LIO31_RS03535;Parent=gene-LIO31_RS03535;anticodon=(pos:672310..672312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS03535;product=tRNA-Ser NZ_CP085086.1 tRNAscan-SE exon 672276 672363 . + . ID=exon-LIO31_RS03535-1;Parent=rna-LIO31_RS03535;anticodon=(pos:672310..672312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS03535;product=tRNA-Ser NZ_CP085086.1 RefSeq gene 672706 673869 . - . ID=gene-LIO31_RS03540;Name=LIO31_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03540 NZ_CP085086.1 Protein Homology CDS 672706 673869 . - 0 ID=cds-WP_226960893.1;Parent=gene-LIO31_RS03540;Dbxref=Genbank:WP_226960893.1;Name=WP_226960893.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677391.1;locus_tag=LIO31_RS03540;product=IS30 family transposase;protein_id=WP_226960893.1;transl_table=11 NZ_CP085086.1 RefSeq gene 674071 675072 . + . ID=gene-LIO31_RS03545;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=LIO31_RS03545 NZ_CP085086.1 Protein Homology CDS 674071 675072 . + 0 ID=cds-WP_014636572.1;Parent=gene-LIO31_RS03545;Dbxref=Genbank:WP_014636572.1;Name=WP_014636572.1;Ontology_term=GO:0043101,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636572.1;locus_tag=LIO31_RS03545;product=adenosine deaminase;protein_id=WP_014636572.1;transl_table=11 NZ_CP085086.1 RefSeq gene 675116 675898 . - . ID=gene-LIO31_RS03550;Name=LIO31_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03550 NZ_CP085086.1 Protein Homology CDS 675116 675898 . - 0 ID=cds-WP_011922087.1;Parent=gene-LIO31_RS03550;Dbxref=Genbank:WP_011922087.1;Name=WP_011922087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935541.1;locus_tag=LIO31_RS03550;product=hypothetical protein;protein_id=WP_011922087.1;transl_table=11 NZ_CP085086.1 RefSeq gene 675915 676622 . - . ID=gene-LIO31_RS03555;Name=LIO31_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03555 NZ_CP085086.1 Protein Homology CDS 675915 676622 . - 0 ID=cds-WP_011922088.1;Parent=gene-LIO31_RS03555;Dbxref=Genbank:WP_011922088.1;Name=WP_011922088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935539.1;locus_tag=LIO31_RS03555;product=ABC transporter ATP-binding protein;protein_id=WP_011922088.1;transl_table=11 NZ_CP085086.1 RefSeq gene 676615 676989 . - . ID=gene-LIO31_RS03560;Name=LIO31_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03560 NZ_CP085086.1 Protein Homology CDS 676615 676989 . - 0 ID=cds-WP_012775014.1;Parent=gene-LIO31_RS03560;Dbxref=Genbank:WP_012775014.1;Name=WP_012775014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935537.1;locus_tag=LIO31_RS03560;product=GntR family transcriptional regulator;protein_id=WP_012775014.1;transl_table=11 NZ_CP085086.1 RefSeq gene 677143 680253 . + . ID=gene-LIO31_RS03565;Name=LIO31_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03565 NZ_CP085086.1 Protein Homology CDS 677143 680253 . + 0 ID=cds-WP_074389606.1;Parent=gene-LIO31_RS03565;Dbxref=Genbank:WP_074389606.1;Name=WP_074389606.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940960.1;locus_tag=LIO31_RS03565;product=DNA polymerase III subunit alpha;protein_id=WP_074389606.1;transl_table=11 NZ_CP085086.1 RefSeq gene 680338 681348 . + . ID=gene-LIO31_RS03570;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LIO31_RS03570 NZ_CP085086.1 Protein Homology CDS 680338 681348 . + 0 ID=cds-WP_002940961.1;Parent=gene-LIO31_RS03570;Dbxref=Genbank:WP_002940961.1;Name=WP_002940961.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590682.1;locus_tag=LIO31_RS03570;product=6-phosphofructokinase;protein_id=WP_002940961.1;transl_table=11 NZ_CP085086.1 RefSeq gene 681415 682920 . + . ID=gene-LIO31_RS03575;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LIO31_RS03575 NZ_CP085086.1 Protein Homology CDS 681415 682920 . + 0 ID=cds-WP_024379423.1;Parent=gene-LIO31_RS03575;Dbxref=Genbank:WP_024379423.1;Name=WP_024379423.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809276.1;locus_tag=LIO31_RS03575;product=pyruvate kinase;protein_id=WP_024379423.1;transl_table=11 NZ_CP085086.1 RefSeq gene 683081 686494 . + . ID=gene-LIO31_RS03580;Name=ide;gbkey=Gene;gene=ide;gene_biotype=protein_coding;locus_tag=LIO31_RS03580 NZ_CP085086.1 Protein Homology CDS 683081 686494 . + 0 ID=cds-WP_226960928.1;Parent=gene-LIO31_RS03580;Dbxref=Genbank:WP_226960928.1;Name=WP_226960928.1;gbkey=CDS;gene=ide;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922092.1;locus_tag=LIO31_RS03580;product=IdeS family IgM protease;protein_id=WP_226960928.1;transl_table=11 NZ_CP085086.1 RefSeq gene 686819 687928 . - . ID=gene-LIO31_RS03585;Name=LIO31_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03585 NZ_CP085086.1 Protein Homology CDS 686819 687928 . - 0 ID=cds-WP_012775645.1;Parent=gene-LIO31_RS03585;Dbxref=Genbank:WP_012775645.1;Name=WP_012775645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638276.1;locus_tag=LIO31_RS03585;product=FAD-binding oxidoreductase;protein_id=WP_012775645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 688013 688630 . + . ID=gene-LIO31_RS03590;Name=LIO31_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03590 NZ_CP085086.1 Protein Homology CDS 688013 688630 . + 0 ID=cds-WP_002935518.1;Parent=gene-LIO31_RS03590;Dbxref=Genbank:WP_002935518.1;Name=WP_002935518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935518.1;locus_tag=LIO31_RS03590;product=GDSL-type esterase/lipase family protein;protein_id=WP_002935518.1;transl_table=11 NZ_CP085086.1 RefSeq gene 688673 689215 . + . ID=gene-LIO31_RS03595;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LIO31_RS03595 NZ_CP085086.1 Protein Homology CDS 688673 689215 . + 0 ID=cds-WP_002940970.1;Parent=gene-LIO31_RS03595;Dbxref=Genbank:WP_002940970.1;Name=WP_002940970.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940970.1;locus_tag=LIO31_RS03595;product=signal peptidase I;protein_id=WP_002940970.1;transl_table=11 NZ_CP085086.1 RefSeq gene 689405 691216 . + . ID=gene-LIO31_RS03600;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LIO31_RS03600 NZ_CP085086.1 Protein Homology CDS 689405 691216 . + 0 ID=cds-WP_024406047.1;Parent=gene-LIO31_RS03600;Dbxref=Genbank:WP_024406047.1;Name=WP_024406047.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621492.1;locus_tag=LIO31_RS03600;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_024406047.1;transl_table=11 NZ_CP085086.1 RefSeq gene 691370 692011 . + . ID=gene-LIO31_RS03605;Name=LIO31_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03605 NZ_CP085086.1 Protein Homology CDS 691370 692011 . + 0 ID=cds-WP_002940990.1;Parent=gene-LIO31_RS03605;Dbxref=Genbank:WP_002940990.1;Name=WP_002940990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004228788.1;locus_tag=LIO31_RS03605;product=amino acid ABC transporter permease;protein_id=WP_002940990.1;transl_table=11 NZ_CP085086.1 RefSeq gene 692021 692653 . + . ID=gene-LIO31_RS03610;Name=LIO31_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03610 NZ_CP085086.1 Protein Homology CDS 692021 692653 . + 0 ID=cds-WP_074389604.1;Parent=gene-LIO31_RS03610;Dbxref=Genbank:WP_074389604.1;Name=WP_074389604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909533.1;locus_tag=LIO31_RS03610;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_074389604.1;transl_table=11 NZ_CP085086.1 RefSeq gene 692680 693510 . + . ID=gene-LIO31_RS03615;Name=LIO31_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03615 NZ_CP085086.1 Protein Homology CDS 692680 693510 . + 0 ID=cds-WP_024390310.1;Parent=gene-LIO31_RS03615;Dbxref=Genbank:WP_024390310.1;Name=WP_024390310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759190.1;locus_tag=LIO31_RS03615;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_024390310.1;transl_table=11 NZ_CP085086.1 RefSeq gene 694105 695268 . - . ID=gene-LIO31_RS03620;Name=LIO31_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03620 NZ_CP085086.1 Protein Homology CDS 694105 695268 . - 0 ID=cds-WP_011921673.1;Parent=gene-LIO31_RS03620;Dbxref=Genbank:WP_011921673.1;Name=WP_011921673.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636190.1;locus_tag=LIO31_RS03620;product=IS110 family transposase;protein_id=WP_011921673.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 695819 696103 . + . ID=gene-LIO31_RS03625;Name=LIO31_RS03625;end_range=696103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03625;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 695819 696103 . + 0 ID=cds-LIO31_RS03625;Parent=gene-LIO31_RS03625;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=696103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011680908.1;locus_tag=LIO31_RS03625;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 696551 697189 . - . ID=gene-LIO31_RS03630;Name=LIO31_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03630 NZ_CP085086.1 Protein Homology CDS 696551 697189 . - 0 ID=cds-WP_009909540.1;Parent=gene-LIO31_RS03630;Dbxref=Genbank:WP_009909540.1;Name=WP_009909540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938932.1;locus_tag=LIO31_RS03630;product=MBL fold metallo-hydrolase;protein_id=WP_009909540.1;transl_table=11 NZ_CP085086.1 RefSeq gene 697306 699765 . + . ID=gene-LIO31_RS03635;Name=LIO31_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03635 NZ_CP085086.1 Protein Homology CDS 697306 699765 . + 0 ID=cds-WP_226960434.1;Parent=gene-LIO31_RS03635;Dbxref=Genbank:WP_226960434.1;Name=WP_226960434.1;Ontology_term=GO:0006139,GO:0006260,GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA,DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775018.1;locus_tag=LIO31_RS03635;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=WP_226960434.1;transl_table=11 NZ_CP085086.1 RefSeq gene 699925 701001 . + . ID=gene-LIO31_RS03640;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LIO31_RS03640 NZ_CP085086.1 Protein Homology CDS 699925 701001 . + 0 ID=cds-WP_226960929.1;Parent=gene-LIO31_RS03640;Dbxref=Genbank:WP_226960929.1;Name=WP_226960929.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730270.1;locus_tag=LIO31_RS03640;product=glutamate 5-kinase;protein_id=WP_226960929.1;transl_table=11 NZ_CP085086.1 RefSeq gene 701066 702304 . + . ID=gene-LIO31_RS03645;Name=LIO31_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03645 NZ_CP085086.1 Protein Homology CDS 701066 702304 . + 0 ID=cds-WP_074389292.1;Parent=gene-LIO31_RS03645;Dbxref=Genbank:WP_074389292.1;Name=WP_074389292.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922104.1;locus_tag=LIO31_RS03645;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_074389292.1;transl_table=11 NZ_CP085086.1 RefSeq gene 702314 703099 . + . ID=gene-LIO31_RS03650;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LIO31_RS03650 NZ_CP085086.1 Protein Homology CDS 702314 703099 . + 0 ID=cds-WP_074389293.1;Parent=gene-LIO31_RS03650;Dbxref=Genbank:WP_074389293.1;Name=WP_074389293.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636251.1;locus_tag=LIO31_RS03650;product=pyrroline-5-carboxylate reductase;protein_id=WP_074389293.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 703290 703526 . - . ID=gene-LIO31_RS03655;Name=LIO31_RS03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03655;partial=true;pseudo=true;start_range=.,703290 NZ_CP085086.1 Protein Homology CDS 703290 703526 . - 0 ID=cds-LIO31_RS03655;Parent=gene-LIO31_RS03655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002921461.1;locus_tag=LIO31_RS03655;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,703290;transl_table=11 NZ_CP085086.1 RefSeq gene 703653 704504 . + . ID=gene-LIO31_RS03660;Name=LIO31_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03660 NZ_CP085086.1 Protein Homology CDS 703653 704504 . + 0 ID=cds-WP_024377015.1;Parent=gene-LIO31_RS03660;Dbxref=Genbank:WP_024377015.1;Name=WP_024377015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938910.1;locus_tag=LIO31_RS03660;product=DegV family protein;protein_id=WP_024377015.1;transl_table=11 NZ_CP085086.1 RefSeq gene 704603 705862 . - . ID=gene-LIO31_RS03665;Name=LIO31_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03665 NZ_CP085086.1 Protein Homology CDS 704603 705862 . - 0 ID=cds-WP_024383681.1;Parent=gene-LIO31_RS03665;Dbxref=Genbank:WP_024383681.1;Name=WP_024383681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194921.1;locus_tag=LIO31_RS03665;product=PLP-dependent aminotransferase family protein;protein_id=WP_024383681.1;transl_table=11 NZ_CP085086.1 RefSeq gene 705985 706719 . + . ID=gene-LIO31_RS03670;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LIO31_RS03670 NZ_CP085086.1 Protein Homology CDS 705985 706719 . + 0 ID=cds-WP_024381470.1;Parent=gene-LIO31_RS03670;Dbxref=Genbank:WP_024381470.1;Name=WP_024381470.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638263.1;locus_tag=LIO31_RS03670;product=peroxide stress protein YaaA;protein_id=WP_024381470.1;transl_table=11 NZ_CP085086.1 RefSeq gene 706849 708288 . + . ID=gene-LIO31_RS03675;Name=LIO31_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03675 NZ_CP085086.1 Protein Homology CDS 706849 708288 . + 0 ID=cds-WP_024383682.1;Parent=gene-LIO31_RS03675;Dbxref=Genbank:WP_024383682.1;Name=WP_024383682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638262.1;locus_tag=LIO31_RS03675;product=LCP family protein;protein_id=WP_024383682.1;transl_table=11 NZ_CP085086.1 RefSeq gene 708304 708993 . + . ID=gene-LIO31_RS03680;Name=LIO31_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03680 NZ_CP085086.1 Protein Homology CDS 708304 708993 . + 0 ID=cds-WP_013730276.1;Parent=gene-LIO31_RS03680;Dbxref=Genbank:WP_013730276.1;Name=WP_013730276.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638897.1;locus_tag=LIO31_RS03680;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_013730276.1;transl_table=11 NZ_CP085086.1 RefSeq gene 709003 709689 . + . ID=gene-LIO31_RS03685;Name=LIO31_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03685 NZ_CP085086.1 Protein Homology CDS 709003 709689 . + 0 ID=cds-WP_013730277.1;Parent=gene-LIO31_RS03685;Dbxref=Genbank:WP_013730277.1;Name=WP_013730277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922733.1;locus_tag=LIO31_RS03685;product=tyrosine-protein kinase;protein_id=WP_013730277.1;transl_table=11 NZ_CP085086.1 RefSeq gene 709728 710459 . + . ID=gene-LIO31_RS03690;Name=LIO31_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03690 NZ_CP085086.1 Protein Homology CDS 709728 710459 . + 0 ID=cds-WP_013730278.1;Parent=gene-LIO31_RS03690;Dbxref=Genbank:WP_013730278.1;Name=WP_013730278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565352.1;locus_tag=LIO31_RS03690;product=tyrosine protein phosphatase;protein_id=WP_013730278.1;transl_table=11 NZ_CP085086.1 RefSeq gene 710489 712315 . + . ID=gene-LIO31_RS03695;Name=LIO31_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03695 NZ_CP085086.1 Protein Homology CDS 710489 712315 . + 0 ID=cds-WP_074389601.1;Parent=gene-LIO31_RS03695;Dbxref=Genbank:WP_074389601.1;Name=WP_074389601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636872.1;locus_tag=LIO31_RS03695;product=polysaccharide biosynthesis protein;protein_id=WP_074389601.1;transl_table=11 NZ_CP085086.1 RefSeq gene 712760 713458 . + . ID=gene-LIO31_RS03700;Name=LIO31_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03700 NZ_CP085086.1 Protein Homology CDS 712760 713458 . + 0 ID=cds-WP_014636873.1;Parent=gene-LIO31_RS03700;Dbxref=Genbank:WP_014636873.1;Name=WP_014636873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378094.1;locus_tag=LIO31_RS03700;product=sugar transferase;protein_id=WP_014636873.1;transl_table=11 NZ_CP085086.1 RefSeq gene 713468 714688 . + . ID=gene-LIO31_RS03705;Name=LIO31_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03705 NZ_CP085086.1 Protein Homology CDS 713468 714688 . + 0 ID=cds-WP_024390820.1;Parent=gene-LIO31_RS03705;Dbxref=Genbank:WP_024390820.1;Name=WP_024390820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636874.1;locus_tag=LIO31_RS03705;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_024390820.1;transl_table=11 NZ_CP085086.1 RefSeq gene 714681 715511 . + . ID=gene-LIO31_RS03710;Name=LIO31_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03710 NZ_CP085086.1 Protein Homology CDS 714681 715511 . + 0 ID=cds-WP_024390819.1;Parent=gene-LIO31_RS03710;Dbxref=Genbank:WP_024390819.1;Name=WP_024390819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378096.1;locus_tag=LIO31_RS03710;product=glycosyltransferase;protein_id=WP_024390819.1;transl_table=11 NZ_CP085086.1 RefSeq gene 715588 716481 . + . ID=gene-LIO31_RS03715;Name=LIO31_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03715 NZ_CP085086.1 Protein Homology CDS 715588 716481 . + 0 ID=cds-WP_024390818.1;Parent=gene-LIO31_RS03715;Dbxref=Genbank:WP_024390818.1;Name=WP_024390818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014536.2;locus_tag=LIO31_RS03715;product=hypothetical protein;protein_id=WP_024390818.1;transl_table=11 NZ_CP085086.1 RefSeq gene 716486 717076 . + . ID=gene-LIO31_RS03720;Name=LIO31_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03720 NZ_CP085086.1 Protein Homology CDS 716486 717076 . + 0 ID=cds-WP_024390817.1;Parent=gene-LIO31_RS03720;Dbxref=Genbank:WP_024390817.1;Name=WP_024390817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012792.2;locus_tag=LIO31_RS03720;product=GNAT family N-acetyltransferase;protein_id=WP_024390817.1;transl_table=11 NZ_CP085086.1 RefSeq gene 717073 718230 . + . ID=gene-LIO31_RS03725;Name=LIO31_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03725 NZ_CP085086.1 GeneMarkS-2+ CDS 717073 718230 . + 0 ID=cds-WP_074412167.1;Parent=gene-LIO31_RS03725;Dbxref=Genbank:WP_074412167.1;Name=WP_074412167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03725;product=hypothetical protein;protein_id=WP_074412167.1;transl_table=11 NZ_CP085086.1 RefSeq gene 718227 719129 . + . ID=gene-LIO31_RS03730;Name=LIO31_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03730 NZ_CP085086.1 Protein Homology CDS 718227 719129 . + 0 ID=cds-WP_161944493.1;Parent=gene-LIO31_RS03730;Dbxref=Genbank:WP_161944493.1;Name=WP_161944493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021616.2;locus_tag=LIO31_RS03730;product=glycosyltransferase;protein_id=WP_161944493.1;transl_table=11 NZ_CP085086.1 RefSeq gene 719126 720541 . + . ID=gene-LIO31_RS03735;Name=LIO31_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03735 NZ_CP085086.1 Protein Homology CDS 719126 720541 . + 0 ID=cds-WP_024390814.1;Parent=gene-LIO31_RS03735;Dbxref=Genbank:WP_024390814.1;Name=WP_024390814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024832.2;locus_tag=LIO31_RS03735;product=oligosaccharide flippase family protein;protein_id=WP_024390814.1;transl_table=11 NZ_CP085086.1 RefSeq gene 720713 722218 . + . ID=gene-LIO31_RS03740;Name=LIO31_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03740 NZ_CP085086.1 Protein Homology CDS 720713 722218 . + 0 ID=cds-WP_024390813.1;Parent=gene-LIO31_RS03740;Dbxref=Genbank:WP_024390813.1;Name=WP_024390813.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730287.1;locus_tag=LIO31_RS03740;product=nucleotide sugar dehydrogenase;protein_id=WP_024390813.1;transl_table=11 NZ_CP085086.1 RefSeq gene 722330 723577 . - . ID=gene-LIO31_RS03745;Name=LIO31_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03745 NZ_CP085086.1 Protein Homology CDS 722330 723577 . - 0 ID=cds-WP_074389816.1;Parent=gene-LIO31_RS03745;Dbxref=Genbank:WP_074389816.1;Name=WP_074389816.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735620.1;locus_tag=LIO31_RS03745;product=ISL3 family transposase;protein_id=WP_074389816.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 723740 724909 . - . ID=gene-LIO31_RS03750;Name=LIO31_RS03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03750;partial=true;pseudo=true;start_range=.,723740 NZ_CP085086.1 Protein Homology CDS 723740 724909 . - 0 ID=cds-LIO31_RS03750;Parent=gene-LIO31_RS03750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941577.1;locus_tag=LIO31_RS03750;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,723740;transl_table=11 NZ_CP085086.1 RefSeq gene 724863 725063 . - . ID=gene-LIO31_RS03755;Name=LIO31_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03755 NZ_CP085086.1 Protein Homology CDS 724863 725063 . - 0 ID=cds-WP_013730290.1;Parent=gene-LIO31_RS03755;Dbxref=Genbank:WP_013730290.1;Name=WP_013730290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=LIO31_RS03755;product=hypothetical protein;protein_id=WP_013730290.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 725136 725273 . - . ID=gene-LIO31_RS03760;Name=LIO31_RS03760;end_range=725273,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03760;partial=true;pseudo=true;start_range=.,725136 NZ_CP085086.1 Protein Homology CDS 725136 725273 . - 0 ID=cds-LIO31_RS03760;Parent=gene-LIO31_RS03760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=725273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS03760;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,725136;transl_table=11 NZ_CP085086.1 RefSeq gene 725352 725537 . + . ID=gene-LIO31_RS03765;Name=LIO31_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03765 NZ_CP085086.1 Protein Homology CDS 725352 725537 . + 0 ID=cds-WP_013730291.1;Parent=gene-LIO31_RS03765;Dbxref=Genbank:WP_013730291.1;Name=WP_013730291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935182.1;locus_tag=LIO31_RS03765;product=hypothetical protein;protein_id=WP_013730291.1;transl_table=11 NZ_CP085086.1 RefSeq gene 725569 726468 . - . ID=gene-LIO31_RS03770;Name=LIO31_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03770 NZ_CP085086.1 Protein Homology CDS 725569 726468 . - 0 ID=cds-WP_074389817.1;Parent=gene-LIO31_RS03770;Dbxref=Genbank:WP_074389817.1;Name=WP_074389817.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384879.1;locus_tag=LIO31_RS03770;product=tyrosine-type recombinase/integrase;protein_id=WP_074389817.1;transl_table=11 NZ_CP085086.1 RefSeq gene 726876 727865 . - . ID=gene-LIO31_RS03775;Name=LIO31_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03775 NZ_CP085086.1 Protein Homology CDS 726876 727865 . - 0 ID=cds-WP_018379641.1;Parent=gene-LIO31_RS03775;Dbxref=Genbank:WP_018379641.1;Name=WP_018379641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694215.1;locus_tag=LIO31_RS03775;product=hypothetical protein;protein_id=WP_018379641.1;transl_table=11 NZ_CP085086.1 RefSeq gene 728079 729359 . + . ID=gene-LIO31_RS03780;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LIO31_RS03780 NZ_CP085086.1 Protein Homology CDS 728079 729359 . + 0 ID=cds-WP_014636887.1;Parent=gene-LIO31_RS03780;Dbxref=Genbank:WP_014636887.1;Name=WP_014636887.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775025.1;locus_tag=LIO31_RS03780;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_014636887.1;transl_table=11 NZ_CP085086.1 RefSeq gene 729368 729859 . + . ID=gene-LIO31_RS03785;Name=LIO31_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03785 NZ_CP085086.1 Protein Homology CDS 729368 729859 . + 0 ID=cds-WP_014636886.1;Parent=gene-LIO31_RS03785;Dbxref=Genbank:WP_014636886.1;Name=WP_014636886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638246.1;locus_tag=LIO31_RS03785;product=shikimate kinase;protein_id=WP_014636886.1;transl_table=11 NZ_CP085086.1 RefSeq gene 729850 730677 . + . ID=gene-LIO31_RS03790;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LIO31_RS03790 NZ_CP085086.1 Protein Homology CDS 729850 730677 . + 0 ID=cds-WP_024381706.1;Parent=gene-LIO31_RS03790;Dbxref=Genbank:WP_024381706.1;Name=WP_024381706.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941297.1;locus_tag=LIO31_RS03790;product=prephenate dehydratase;protein_id=WP_024381706.1;transl_table=11 NZ_CP085086.1 RefSeq gene 730689 732011 . + . ID=gene-LIO31_RS03795;Name=LIO31_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03795 NZ_CP085086.1 Protein Homology CDS 730689 732011 . + 0 ID=cds-WP_013730298.1;Parent=gene-LIO31_RS03795;Dbxref=Genbank:WP_013730298.1;Name=WP_013730298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000032347.1;locus_tag=LIO31_RS03795;product=LCP family protein;protein_id=WP_013730298.1;transl_table=11 NZ_CP085086.1 RefSeq gene 732078 733439 . + . ID=gene-LIO31_RS03800;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LIO31_RS03800 NZ_CP085086.1 Protein Homology CDS 732078 733439 . + 0 ID=cds-WP_024394786.1;Parent=gene-LIO31_RS03800;Dbxref=Genbank:WP_024394786.1;Name=WP_024394786.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935126.1;locus_tag=LIO31_RS03800;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_024394786.1;transl_table=11 NZ_CP085086.1 RefSeq gene 733650 733817 . + . ID=gene-LIO31_RS03805;Name=LIO31_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03805 NZ_CP085086.1 Protein Homology CDS 733650 733817 . + 0 ID=cds-WP_032500895.1;Parent=gene-LIO31_RS03805;Dbxref=Genbank:WP_032500895.1;Name=WP_032500895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943390.1;locus_tag=LIO31_RS03805;product=hypothetical protein;protein_id=WP_032500895.1;transl_table=11 NZ_CP085086.1 RefSeq gene 733820 734638 . + . ID=gene-LIO31_RS03810;Name=LIO31_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03810 NZ_CP085086.1 Protein Homology CDS 733820 734638 . + 0 ID=cds-WP_074389819.1;Parent=gene-LIO31_RS03810;Dbxref=Genbank:WP_074389819.1;Name=WP_074389819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648301.1;locus_tag=LIO31_RS03810;product=replication initiator protein A;protein_id=WP_074389819.1;transl_table=11 NZ_CP085086.1 RefSeq gene 734787 736142 . + . ID=gene-LIO31_RS03815;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=LIO31_RS03815 NZ_CP085086.1 Protein Homology CDS 734787 736142 . + 0 ID=cds-WP_074389820.1;Parent=gene-LIO31_RS03815;Dbxref=Genbank:WP_074389820.1;Name=WP_074389820.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000670032.1;locus_tag=LIO31_RS03815;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_074389820.1;transl_table=11 NZ_CP085086.1 RefSeq gene 736126 736554 . + . ID=gene-LIO31_RS03820;Name=LIO31_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03820 NZ_CP085086.1 Protein Homology CDS 736126 736554 . + 0 ID=cds-WP_011922469.1;Parent=gene-LIO31_RS03820;Dbxref=Genbank:WP_011922469.1;Name=WP_011922469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050381.1;locus_tag=LIO31_RS03820;product=hypothetical protein;protein_id=WP_011922469.1;transl_table=11 NZ_CP085086.1 RefSeq gene 736565 736948 . + . ID=gene-LIO31_RS03825;Name=LIO31_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03825 NZ_CP085086.1 Protein Homology CDS 736565 736948 . + 0 ID=cds-WP_024383762.1;Parent=gene-LIO31_RS03825;Dbxref=Genbank:WP_024383762.1;Name=WP_024383762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770591.1;locus_tag=LIO31_RS03825;product=arsenate reductase;protein_id=WP_024383762.1;transl_table=11 NZ_CP085086.1 RefSeq gene 736957 737190 . + . ID=gene-LIO31_RS03830;Name=LIO31_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03830 NZ_CP085086.1 Protein Homology CDS 736957 737190 . + 0 ID=cds-WP_001005705.1;Parent=gene-LIO31_RS03830;Dbxref=Genbank:WP_001005705.1;Name=WP_001005705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003065178.1;locus_tag=LIO31_RS03830;product=hypothetical protein;protein_id=WP_001005705.1;transl_table=11 NZ_CP085086.1 RefSeq gene 737193 737777 . + . ID=gene-LIO31_RS03835;Name=LIO31_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03835 NZ_CP085086.1 Protein Homology CDS 737193 737777 . + 0 ID=cds-WP_023370108.1;Parent=gene-LIO31_RS03835;Dbxref=Genbank:WP_023370108.1;Name=WP_023370108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000619435.1;locus_tag=LIO31_RS03835;product=CPBP family intramembrane metalloprotease;protein_id=WP_023370108.1;transl_table=11 NZ_CP085086.1 RefSeq gene 737855 738343 . + . ID=gene-LIO31_RS03840;Name=LIO31_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03840 NZ_CP085086.1 Protein Homology CDS 737855 738343 . + 0 ID=cds-WP_024383761.1;Parent=gene-LIO31_RS03840;Dbxref=Genbank:WP_024383761.1;Name=WP_024383761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648298.1;locus_tag=LIO31_RS03840;product=hypothetical protein;protein_id=WP_024383761.1;transl_table=11 NZ_CP085086.1 RefSeq gene 738343 740160 . + . ID=gene-LIO31_RS03845;Name=LIO31_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03845 NZ_CP085086.1 Protein Homology CDS 738343 740160 . + 0 ID=cds-WP_074412173.1;Parent=gene-LIO31_RS03845;Dbxref=Genbank:WP_074412173.1;Name=WP_074412173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287311.1;locus_tag=LIO31_RS03845;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_074412173.1;transl_table=11 NZ_CP085086.1 RefSeq gene 740178 740420 . + . ID=gene-LIO31_RS03850;Name=LIO31_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03850 NZ_CP085086.1 Protein Homology CDS 740178 740420 . + 0 ID=cds-WP_023370112.1;Parent=gene-LIO31_RS03850;Dbxref=Genbank:WP_023370112.1;Name=WP_023370112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012678629.1;locus_tag=LIO31_RS03850;product=hypothetical protein;protein_id=WP_023370112.1;transl_table=11 NZ_CP085086.1 RefSeq gene 740439 741293 . + . ID=gene-LIO31_RS03855;Name=LIO31_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03855 NZ_CP085086.1 Protein Homology CDS 740439 741293 . + 0 ID=cds-WP_226960930.1;Parent=gene-LIO31_RS03855;Dbxref=Genbank:WP_226960930.1;Name=WP_226960930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003065166.1;locus_tag=LIO31_RS03855;product=conjugal transfer protein TrbL;protein_id=WP_226960930.1;transl_table=11 NZ_CP085086.1 RefSeq gene 741355 741708 . + . ID=gene-LIO31_RS03860;Name=LIO31_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03860 NZ_CP085086.1 Protein Homology CDS 741355 741708 . + 0 ID=cds-WP_014636950.1;Parent=gene-LIO31_RS03860;Dbxref=Genbank:WP_014636950.1;Name=WP_014636950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775519.1;locus_tag=LIO31_RS03860;product=PrgI family protein;protein_id=WP_014636950.1;transl_table=11 NZ_CP085086.1 RefSeq gene 741665 744016 . + . ID=gene-LIO31_RS03865;Name=LIO31_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03865 NZ_CP085086.1 Protein Homology CDS 741665 744016 . + 0 ID=cds-WP_171841164.1;Parent=gene-LIO31_RS03865;Dbxref=Genbank:WP_171841164.1;Name=WP_171841164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734154.1;locus_tag=LIO31_RS03865;product=AAA family ATPase;protein_id=WP_171841164.1;transl_table=11 NZ_CP085086.1 RefSeq gene 744018 746819 . + . ID=gene-LIO31_RS03870;Name=LIO31_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03870 NZ_CP085086.1 Protein Homology CDS 744018 746819 . + 0 ID=cds-WP_226960931.1;Parent=gene-LIO31_RS03870;Dbxref=Genbank:WP_226960931.1;Name=WP_226960931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656693.1;locus_tag=LIO31_RS03870;product=phage tail tip lysozyme;protein_id=WP_226960931.1;transl_table=11 NZ_CP085086.1 RefSeq gene 746941 747534 . + . ID=gene-LIO31_RS03875;Name=LIO31_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03875 NZ_CP085086.1 Protein Homology CDS 746941 747534 . + 0 ID=cds-WP_032510474.1;Parent=gene-LIO31_RS03875;Dbxref=Genbank:WP_032510474.1;Name=WP_032510474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364835.1;locus_tag=LIO31_RS03875;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_032510474.1;transl_table=11 NZ_CP085086.1 RefSeq gene 747531 748373 . + . ID=gene-LIO31_RS03880;Name=LIO31_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03880 NZ_CP085086.1 Protein Homology CDS 747531 748373 . + 0 ID=cds-WP_024405442.1;Parent=gene-LIO31_RS03880;Dbxref=Genbank:WP_024405442.1;Name=WP_024405442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672732.1;locus_tag=LIO31_RS03880;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_024405442.1;transl_table=11 NZ_CP085086.1 RefSeq gene 748380 748607 . + . ID=gene-LIO31_RS03885;Name=LIO31_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03885 NZ_CP085086.1 GeneMarkS-2+ CDS 748380 748607 . + 0 ID=cds-WP_029750527.1;Parent=gene-LIO31_RS03885;Dbxref=Genbank:WP_029750527.1;Name=WP_029750527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS03885;product=hypothetical protein;protein_id=WP_029750527.1;transl_table=11 NZ_CP085086.1 RefSeq gene 749115 754010 . + . ID=gene-LIO31_RS03890;Name=LIO31_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03890 NZ_CP085086.1 Protein Homology CDS 749115 754010 . + 0 ID=cds-WP_226960932.1;Parent=gene-LIO31_RS03890;Dbxref=Genbank:WP_226960932.1;Name=WP_226960932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167702.1;locus_tag=LIO31_RS03890;product=GbpC/Spa domain-containing protein;protein_id=WP_226960932.1;transl_table=11 NZ_CP085086.1 RefSeq gene 754011 754202 . + . ID=gene-LIO31_RS03895;Name=LIO31_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03895 NZ_CP085086.1 Protein Homology CDS 754011 754202 . + 0 ID=cds-WP_044693404.1;Parent=gene-LIO31_RS03895;Dbxref=Genbank:WP_044693404.1;Name=WP_044693404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017370833.1;locus_tag=LIO31_RS03895;product=calcium-binding protein;protein_id=WP_044693404.1;transl_table=11 NZ_CP085086.1 RefSeq gene 754186 754737 . + . ID=gene-LIO31_RS03900;Name=LIO31_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03900 NZ_CP085086.1 Protein Homology CDS 754186 754737 . + 0 ID=cds-WP_074389831.1;Parent=gene-LIO31_RS03900;Dbxref=Genbank:WP_074389831.1;Name=WP_074389831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017370834.1;locus_tag=LIO31_RS03900;product=hypothetical protein;protein_id=WP_074389831.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 754788 758597 . + . ID=gene-LIO31_RS03905;Name=LIO31_RS03905;end_range=758597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03905;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 754788 758597 . + 0 ID=cds-LIO31_RS03905;Parent=gene-LIO31_RS03905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006306,GO:0003677,GO:0008170;end_range=758597,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071192.1;locus_tag=LIO31_RS03905;partial=true;product=N-6 DNA methylase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 758597 759028 . + . ID=gene-LIO31_RS03910;Name=LIO31_RS03910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03910;partial=true;pseudo=true;start_range=.,758597 NZ_CP085086.1 Protein Homology CDS 758597 759028 . + 0 ID=cds-LIO31_RS03910;Parent=gene-LIO31_RS03910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017771980.1;locus_tag=LIO31_RS03910;partial=true;product=peptidylprolyl isomerase;pseudo=true;start_range=.,758597;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 759067 759471 . + . ID=gene-LIO31_RS03915;Name=LIO31_RS03915;end_range=759471,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03915;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 759067 759471 . + 0 ID=cds-LIO31_RS03915;Parent=gene-LIO31_RS03915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=759471,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922442.1;locus_tag=LIO31_RS03915;partial=true;product=DNA primase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 759473 759541 . + . ID=gene-LIO31_RS03920;Name=LIO31_RS03920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03920;partial=true;pseudo=true;start_range=.,759473 NZ_CP085086.1 Protein Homology CDS 759473 759541 . + 0 ID=cds-LIO31_RS03920;Parent=gene-LIO31_RS03920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000048064.1;locus_tag=LIO31_RS03920;partial=true;product=DUF5945 family protein;pseudo=true;start_range=.,759473;transl_table=11 NZ_CP085086.1 RefSeq gene 759591 759881 . + . ID=gene-LIO31_RS03925;Name=LIO31_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03925 NZ_CP085086.1 Protein Homology CDS 759591 759881 . + 0 ID=cds-WP_024405543.1;Parent=gene-LIO31_RS03925;Dbxref=Genbank:WP_024405543.1;Name=WP_024405543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000667954.1;locus_tag=LIO31_RS03925;product=hypothetical protein;protein_id=WP_024405543.1;transl_table=11 NZ_CP085086.1 RefSeq gene 759951 760427 . + . ID=gene-LIO31_RS03930;Name=LIO31_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03930 NZ_CP085086.1 Protein Homology CDS 759951 760427 . + 0 ID=cds-WP_024405542.1;Parent=gene-LIO31_RS03930;Dbxref=Genbank:WP_024405542.1;Name=WP_024405542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013851913.1;locus_tag=LIO31_RS03930;product=helix-turn-helix domain-containing protein;protein_id=WP_024405542.1;transl_table=11 NZ_CP085086.1 RefSeq gene 760427 761203 . + . ID=gene-LIO31_RS03935;Name=LIO31_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03935 NZ_CP085086.1 Protein Homology CDS 760427 761203 . + 0 ID=cds-WP_024405541.1;Parent=gene-LIO31_RS03935;Dbxref=Genbank:WP_024405541.1;Name=WP_024405541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048438.1;locus_tag=LIO31_RS03935;product=zeta toxin family protein;protein_id=WP_024405541.1;transl_table=11 NZ_CP085086.1 RefSeq gene 761200 762099 . + . ID=gene-LIO31_RS03940;Name=LIO31_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03940 NZ_CP085086.1 Protein Homology CDS 761200 762099 . + 0 ID=cds-WP_216092534.1;Parent=gene-LIO31_RS03940;Dbxref=Genbank:WP_216092534.1;Name=WP_216092534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003050786.1;locus_tag=LIO31_RS03940;product=AAA family ATPase;protein_id=WP_216092534.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 762203 762391 . + . ID=gene-LIO31_RS03945;Name=LIO31_RS03945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03945;partial=true;pseudo=true;start_range=.,762203 NZ_CP085086.1 Protein Homology CDS 762203 762391 . + 0 ID=cds-LIO31_RS03945;Parent=gene-LIO31_RS03945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344418.1;locus_tag=LIO31_RS03945;partial=true;product=nuclear transport factor 2 family protein;pseudo=true;start_range=.,762203;transl_table=11 NZ_CP085086.1 RefSeq gene 762404 763054 . + . ID=gene-LIO31_RS03950;Name=LIO31_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03950 NZ_CP085086.1 Protein Homology CDS 762404 763054 . + 0 ID=cds-WP_216092535.1;Parent=gene-LIO31_RS03950;Dbxref=Genbank:WP_216092535.1;Name=WP_216092535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573113.1;locus_tag=LIO31_RS03950;product=SAP domain-containing protein;protein_id=WP_216092535.1;transl_table=11 NZ_CP085086.1 RefSeq gene 763344 764456 . + . ID=gene-LIO31_RS03955;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LIO31_RS03955 NZ_CP085086.1 Protein Homology CDS 763344 764456 . + 0 ID=cds-WP_024405520.1;Parent=gene-LIO31_RS03955;Dbxref=Genbank:WP_024405520.1;Name=WP_024405520.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941733.1;locus_tag=LIO31_RS03955;product=UDP-galactopyranose mutase;protein_id=WP_024405520.1;transl_table=11 NZ_CP085086.1 RefSeq gene 764553 765098 . - . ID=gene-LIO31_RS03960;Name=LIO31_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03960 NZ_CP085086.1 Protein Homology CDS 764553 765098 . - 0 ID=cds-WP_002941732.1;Parent=gene-LIO31_RS03960;Dbxref=Genbank:WP_002941732.1;Name=WP_002941732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775026.1;locus_tag=LIO31_RS03960;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002941732.1;transl_table=11 NZ_CP085086.1 RefSeq gene 765161 765610 . - . ID=gene-LIO31_RS03965;Name=LIO31_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03965 NZ_CP085086.1 Protein Homology CDS 765161 765610 . - 0 ID=cds-WP_024383028.1;Parent=gene-LIO31_RS03965;Dbxref=Genbank:WP_024383028.1;Name=WP_024383028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909619.1;locus_tag=LIO31_RS03965;product=MarR family transcriptional regulator;protein_id=WP_024383028.1;transl_table=11 NZ_CP085086.1 RefSeq gene 765912 766409 . + . ID=gene-LIO31_RS03970;Name=LIO31_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03970 NZ_CP085086.1 Protein Homology CDS 765912 766409 . + 0 ID=cds-WP_024405519.1;Parent=gene-LIO31_RS03970;Dbxref=Genbank:WP_024405519.1;Name=WP_024405519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736015.1;locus_tag=LIO31_RS03970;product=DUF5590 domain-containing protein;protein_id=WP_024405519.1;transl_table=11 NZ_CP085086.1 RefSeq gene 766406 767587 . + . ID=gene-LIO31_RS03975;Name=LIO31_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03975 NZ_CP085086.1 Protein Homology CDS 766406 767587 . + 0 ID=cds-WP_024383693.1;Parent=gene-LIO31_RS03975;Dbxref=Genbank:WP_024383693.1;Name=WP_024383693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002267262.1;locus_tag=LIO31_RS03975;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_024383693.1;transl_table=11 NZ_CP085086.1 RefSeq gene 767602 768948 . + . ID=gene-LIO31_RS03980;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LIO31_RS03980 NZ_CP085086.1 Protein Homology CDS 767602 768948 . + 0 ID=cds-WP_024405517.1;Parent=gene-LIO31_RS03980;Dbxref=Genbank:WP_024405517.1;Name=WP_024405517.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038477.1;locus_tag=LIO31_RS03980;product=asparagine--tRNA ligase;protein_id=WP_024405517.1;transl_table=11 NZ_CP085086.1 RefSeq gene 769220 769447 . + . ID=gene-LIO31_RS03985;Name=LIO31_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03985 NZ_CP085086.1 Protein Homology CDS 769220 769447 . + 0 ID=cds-WP_002938604.1;Parent=gene-LIO31_RS03985;Dbxref=Genbank:WP_002938604.1;Name=WP_002938604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938604.1;locus_tag=LIO31_RS03985;product=DUF6290 family protein;protein_id=WP_002938604.1;transl_table=11 NZ_CP085086.1 RefSeq gene 769437 769706 . + . ID=gene-LIO31_RS03990;Name=LIO31_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS03990 NZ_CP085086.1 Protein Homology CDS 769437 769706 . + 0 ID=cds-WP_011922754.1;Parent=gene-LIO31_RS03990;Dbxref=Genbank:WP_011922754.1;Name=WP_011922754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636891.1;locus_tag=LIO31_RS03990;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_011922754.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 770112 771436 . + . ID=gene-LIO31_RS03995;Name=LIO31_RS03995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS03995;pseudo=true NZ_CP085086.1 Protein Homology CDS 770112 771436 . + 0 ID=cds-LIO31_RS03995;Parent=gene-LIO31_RS03995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775027.1;locus_tag=LIO31_RS03995;product=MATE family efflux transporter;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 771620 771997 . + . ID=gene-LIO31_RS04000;Name=LIO31_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04000 NZ_CP085086.1 Protein Homology CDS 771620 771997 . + 0 ID=cds-WP_002937263.1;Parent=gene-LIO31_RS04000;Dbxref=Genbank:WP_002937263.1;Name=WP_002937263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011011789.1;locus_tag=LIO31_RS04000;product=RidA family protein;protein_id=WP_002937263.1;transl_table=11 NZ_CP085086.1 RefSeq gene 772019 772906 . + . ID=gene-LIO31_RS04005;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LIO31_RS04005 NZ_CP085086.1 Protein Homology CDS 772019 772906 . + 0 ID=cds-WP_002937261.1;Parent=gene-LIO31_RS04005;Dbxref=Genbank:WP_002937261.1;Name=WP_002937261.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933011.1;locus_tag=LIO31_RS04005;product=RNase adapter RapZ;protein_id=WP_002937261.1;transl_table=11 NZ_CP085086.1 RefSeq gene 772903 773877 . + . ID=gene-LIO31_RS04010;Name=LIO31_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04010 NZ_CP085086.1 Protein Homology CDS 772903 773877 . + 0 ID=cds-WP_024383695.1;Parent=gene-LIO31_RS04010;Dbxref=Genbank:WP_024383695.1;Name=WP_024383695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937257.1;locus_tag=LIO31_RS04010;product=YvcK family protein;protein_id=WP_024383695.1;transl_table=11 NZ_CP085086.1 RefSeq gene 773874 774791 . + . ID=gene-LIO31_RS04015;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=LIO31_RS04015 NZ_CP085086.1 Protein Homology CDS 773874 774791 . + 0 ID=cds-WP_002937252.1;Parent=gene-LIO31_RS04015;Dbxref=Genbank:WP_002937252.1;Name=WP_002937252.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736011.1;locus_tag=LIO31_RS04015;product=DNA-binding protein WhiA;protein_id=WP_002937252.1;transl_table=11 NZ_CP085086.1 RefSeq gene 775075 775770 . + . ID=gene-LIO31_RS04020;Name=LIO31_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04020 NZ_CP085086.1 Protein Homology CDS 775075 775770 . + 0 ID=cds-WP_002937251.1;Parent=gene-LIO31_RS04020;Dbxref=Genbank:WP_002937251.1;Name=WP_002937251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941723.1;locus_tag=LIO31_RS04020;product=Crp/Fnr family transcriptional regulator;protein_id=WP_002937251.1;transl_table=11 NZ_CP085086.1 RefSeq gene 776029 777261 . + . ID=gene-LIO31_RS04025;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=LIO31_RS04025 NZ_CP085086.1 Protein Homology CDS 776029 777261 . + 0 ID=cds-WP_024383696.1;Parent=gene-LIO31_RS04025;Dbxref=Genbank:WP_024383696.1;Name=WP_024383696.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012560827.1;locus_tag=LIO31_RS04025;product=arginine deiminase;protein_id=WP_024383696.1;transl_table=11 NZ_CP085086.1 RefSeq gene 777261 777701 . + . ID=gene-LIO31_RS04030;Name=LIO31_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04030 NZ_CP085086.1 Protein Homology CDS 777261 777701 . + 0 ID=cds-WP_002937248.1;Parent=gene-LIO31_RS04030;Dbxref=Genbank:WP_002937248.1;Name=WP_002937248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922163.1;locus_tag=LIO31_RS04030;product=GNAT family N-acetyltransferase;protein_id=WP_002937248.1;transl_table=11 NZ_CP085086.1 RefSeq gene 777720 778733 . + . ID=gene-LIO31_RS04035;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LIO31_RS04035 NZ_CP085086.1 Protein Homology CDS 777720 778733 . + 0 ID=cds-WP_002937241.1;Parent=gene-LIO31_RS04035;Dbxref=Genbank:WP_002937241.1;Name=WP_002937241.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000195397.1;locus_tag=LIO31_RS04035;product=ornithine carbamoyltransferase;protein_id=WP_002937241.1;transl_table=11 NZ_CP085086.1 RefSeq gene 778851 779798 . + . ID=gene-LIO31_RS04040;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=LIO31_RS04040 NZ_CP085086.1 Protein Homology CDS 778851 779798 . + 0 ID=cds-WP_009909634.1;Parent=gene-LIO31_RS04040;Dbxref=Genbank:WP_009909634.1;Name=WP_009909634.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025409.1;locus_tag=LIO31_RS04040;product=carbamate kinase;protein_id=WP_009909634.1;transl_table=11 NZ_CP085086.1 RefSeq gene 780288 781790 . + . ID=gene-LIO31_RS04045;Name=LIO31_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04045 NZ_CP085086.1 Protein Homology CDS 780288 781790 . + 0 ID=cds-WP_024383698.1;Parent=gene-LIO31_RS04045;Dbxref=Genbank:WP_024383698.1;Name=WP_024383698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937239.1;locus_tag=LIO31_RS04045;product=YfcC family protein;protein_id=WP_024383698.1;transl_table=11 NZ_CP085086.1 RefSeq gene 781909 783249 . + . ID=gene-LIO31_RS04050;Name=LIO31_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04050 NZ_CP085086.1 Protein Homology CDS 781909 783249 . + 0 ID=cds-WP_074389834.1;Parent=gene-LIO31_RS04050;Dbxref=Genbank:WP_074389834.1;Name=WP_074389834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775030.1;locus_tag=LIO31_RS04050;product=dipeptidase;protein_id=WP_074389834.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 783913 785640 . + . ID=gene-LIO31_RS04055;Name=LIO31_RS04055;end_range=785640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04055;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 783913 785640 . + 0 ID=cds-LIO31_RS04055;Parent=gene-LIO31_RS04055;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004553;end_range=785640,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012925.2;locus_tag=LIO31_RS04055;partial=true;product=family 16 glycosylhydrolase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 786313 787548 . + . ID=gene-LIO31_RS04060;Name=LIO31_RS04060;end_range=787548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04060;partial=true;pseudo=true;start_range=.,786313 NZ_CP085086.1 Protein Homology CDS 786313 787548 . + 0 ID=cds-LIO31_RS04060;Parent=gene-LIO31_RS04060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975,GO:0004553;end_range=787548,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000764181.1;locus_tag=LIO31_RS04060;partial=true;product=family 20 glycosylhydrolase;pseudo=true;start_range=.,786313;transl_table=11 NZ_CP085086.1 RefSeq gene 788169 788642 . - . ID=gene-LIO31_RS04065;Name=LIO31_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04065 NZ_CP085086.1 Protein Homology CDS 788169 788642 . - 0 ID=cds-WP_002941715.1;Parent=gene-LIO31_RS04065;Dbxref=Genbank:WP_002941715.1;Name=WP_002941715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646987.1;locus_tag=LIO31_RS04065;product=arginine repressor;protein_id=WP_002941715.1;transl_table=11 NZ_CP085086.1 RefSeq gene 788691 789719 . - . ID=gene-LIO31_RS04070;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LIO31_RS04070 NZ_CP085086.1 Protein Homology CDS 788691 789719 . - 0 ID=cds-WP_012775031.1;Parent=gene-LIO31_RS04070;Dbxref=Genbank:WP_012775031.1;Name=WP_012775031.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646986.1;locus_tag=LIO31_RS04070;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_012775031.1;transl_table=11 NZ_CP085086.1 RefSeq gene 790065 790769 . + . ID=gene-LIO31_RS04075;Name=LIO31_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04075 NZ_CP085086.1 Protein Homology CDS 790065 790769 . + 0 ID=cds-WP_011922172.1;Parent=gene-LIO31_RS04075;Dbxref=Genbank:WP_011922172.1;Name=WP_011922172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937230.1;locus_tag=LIO31_RS04075;product=glucosamine-6-phosphate deaminase;protein_id=WP_011922172.1;transl_table=11 NZ_CP085086.1 RefSeq gene 791236 791562 . + . ID=gene-LIO31_RS04080;Name=LIO31_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04080 NZ_CP085086.1 Protein Homology CDS 791236 791562 . + 0 ID=cds-WP_074389836.1;Parent=gene-LIO31_RS04080;Dbxref=Genbank:WP_074389836.1;Name=WP_074389836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646976.1;locus_tag=LIO31_RS04080;product=hypothetical protein;protein_id=WP_074389836.1;transl_table=11 NZ_CP085086.1 RefSeq gene 791969 792283 . + . ID=gene-LIO31_RS04085;Name=LIO31_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04085 NZ_CP085086.1 Protein Homology CDS 791969 792283 . + 0 ID=cds-WP_013730310.1;Parent=gene-LIO31_RS04085;Dbxref=Genbank:WP_013730310.1;Name=WP_013730310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736000.1;locus_tag=LIO31_RS04085;product=hypothetical protein;protein_id=WP_013730310.1;transl_table=11 NZ_CP085086.1 RefSeq gene 792714 793049 . + . ID=gene-LIO31_RS04090;Name=LIO31_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04090 NZ_CP085086.1 Protein Homology CDS 792714 793049 . + 0 ID=cds-WP_012775034.1;Parent=gene-LIO31_RS04090;Dbxref=Genbank:WP_012775034.1;Name=WP_012775034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775034.1;locus_tag=LIO31_RS04090;product=hypothetical protein;protein_id=WP_012775034.1;transl_table=11 NZ_CP085086.1 RefSeq gene 793159 793503 . + . ID=gene-LIO31_RS04095;Name=LIO31_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04095 NZ_CP085086.1 Protein Homology CDS 793159 793503 . + 0 ID=cds-WP_011922174.1;Parent=gene-LIO31_RS04095;Dbxref=Genbank:WP_011922174.1;Name=WP_011922174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937212.1;locus_tag=LIO31_RS04095;product=hypothetical protein;protein_id=WP_011922174.1;transl_table=11 NZ_CP085086.1 RefSeq gene 793976 794101 . + . ID=gene-LIO31_RS04100;Name=dltX;gbkey=Gene;gene=dltX;gene_biotype=protein_coding;locus_tag=LIO31_RS04100 NZ_CP085086.1 Protein Homology CDS 793976 794101 . + 0 ID=cds-WP_002937209.1;Parent=gene-LIO31_RS04100;Dbxref=Genbank:WP_002937209.1;Name=WP_002937209.1;gbkey=CDS;gene=dltX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937209.1;locus_tag=LIO31_RS04100;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_002937209.1;transl_table=11 NZ_CP085086.1 RefSeq gene 794118 795653 . + . ID=gene-LIO31_RS04105;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=LIO31_RS04105 NZ_CP085086.1 Protein Homology CDS 794118 795653 . + 0 ID=cds-WP_074389837.1;Parent=gene-LIO31_RS04105;Dbxref=Genbank:WP_074389837.1;Name=WP_074389837.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltA;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937207.1;locus_tag=LIO31_RS04105;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_074389837.1;transl_table=11 NZ_CP085086.1 RefSeq gene 795650 796891 . + . ID=gene-LIO31_RS04110;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=LIO31_RS04110 NZ_CP085086.1 Protein Homology CDS 795650 796891 . + 0 ID=cds-WP_011922177.1;Parent=gene-LIO31_RS04110;Dbxref=Genbank:WP_011922177.1;Name=WP_011922177.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730314.1;locus_tag=LIO31_RS04110;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_011922177.1;transl_table=11 NZ_CP085086.1 RefSeq gene 796934 797173 . + . ID=gene-LIO31_RS04115;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=LIO31_RS04115 NZ_CP085086.1 Protein Homology CDS 796934 797173 . + 0 ID=cds-WP_002937198.1;Parent=gene-LIO31_RS04115;Dbxref=Genbank:WP_002937198.1;Name=WP_002937198.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591431.1;locus_tag=LIO31_RS04115;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=WP_002937198.1;transl_table=11 NZ_CP085086.1 RefSeq gene 797166 798431 . + . ID=gene-LIO31_RS04120;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=LIO31_RS04120 NZ_CP085086.1 Protein Homology CDS 797166 798431 . + 0 ID=cds-WP_074389838.1;Parent=gene-LIO31_RS04120;Dbxref=Genbank:WP_074389838.1;Name=WP_074389838.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735995.1;locus_tag=LIO31_RS04120;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_074389838.1;transl_table=11 NZ_CP085086.1 RefSeq gene 798520 799635 . - . ID=gene-LIO31_RS04125;Name=LIO31_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04125 NZ_CP085086.1 Protein Homology CDS 798520 799635 . - 0 ID=cds-WP_024405512.1;Parent=gene-LIO31_RS04125;Dbxref=Genbank:WP_024405512.1;Name=WP_024405512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922179.1;locus_tag=LIO31_RS04125;product=low temperature requirement protein A;protein_id=WP_024405512.1;transl_table=11 NZ_CP085086.1 RefSeq gene 799708 800664 . - . ID=gene-LIO31_RS04130;Name=LIO31_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04130 NZ_CP085086.1 Protein Homology CDS 799708 800664 . - 0 ID=cds-WP_011922180.1;Parent=gene-LIO31_RS04130;Dbxref=Genbank:WP_011922180.1;Name=WP_011922180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523788.1;locus_tag=LIO31_RS04130;product=glutathione S-transferase family protein;protein_id=WP_011922180.1;transl_table=11 NZ_CP085086.1 RefSeq gene 800803 801519 . + . ID=gene-LIO31_RS04135;Name=LIO31_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04135 NZ_CP085086.1 Protein Homology CDS 800803 801519 . + 0 ID=cds-WP_014735992.1;Parent=gene-LIO31_RS04135;Dbxref=Genbank:WP_014735992.1;Name=WP_014735992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922181.1;locus_tag=LIO31_RS04135;product=rRNA pseudouridine synthase;protein_id=WP_014735992.1;transl_table=11 NZ_CP085086.1 RefSeq gene 801533 802012 . + . ID=gene-LIO31_RS04140;Name=LIO31_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04140 NZ_CP085086.1 Protein Homology CDS 801533 802012 . + 0 ID=cds-WP_014735991.1;Parent=gene-LIO31_RS04140;Dbxref=Genbank:WP_014735991.1;Name=WP_014735991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937188.1;locus_tag=LIO31_RS04140;product=glutathione peroxidase;protein_id=WP_014735991.1;transl_table=11 NZ_CP085086.1 RefSeq gene 802031 803032 . - . ID=gene-LIO31_RS04145;Name=LIO31_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04145 NZ_CP085086.1 Protein Homology CDS 802031 803032 . - 0 ID=cds-WP_014735990.1;Parent=gene-LIO31_RS04145;Dbxref=Genbank:WP_014735990.1;Name=WP_014735990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922183.1;locus_tag=LIO31_RS04145;product=iron ABC transporter permease;protein_id=WP_014735990.1;transl_table=11 NZ_CP085086.1 RefSeq gene 803029 804054 . - . ID=gene-LIO31_RS04150;Name=LIO31_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04150 NZ_CP085086.1 Protein Homology CDS 803029 804054 . - 0 ID=cds-WP_024405511.1;Parent=gene-LIO31_RS04150;Dbxref=Genbank:WP_024405511.1;Name=WP_024405511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941649.1;locus_tag=LIO31_RS04150;product=iron ABC transporter permease;protein_id=WP_024405511.1;transl_table=11 NZ_CP085086.1 RefSeq gene 804068 804997 . - . ID=gene-LIO31_RS04155;Name=LIO31_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04155 NZ_CP085086.1 Protein Homology CDS 804068 804997 . - 0 ID=cds-WP_074389839.1;Parent=gene-LIO31_RS04155;Dbxref=Genbank:WP_074389839.1;Name=WP_074389839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937175.1;locus_tag=LIO31_RS04155;product=ABC transporter substrate-binding protein;protein_id=WP_074389839.1;transl_table=11 NZ_CP085086.1 RefSeq gene 805010 805795 . - . ID=gene-LIO31_RS04160;Name=LIO31_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04160 NZ_CP085086.1 Protein Homology CDS 805010 805795 . - 0 ID=cds-WP_011922762.1;Parent=gene-LIO31_RS04160;Dbxref=Genbank:WP_011922762.1;Name=WP_011922762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019774490.1;locus_tag=LIO31_RS04160;product=ABC transporter ATP-binding protein;protein_id=WP_011922762.1;transl_table=11 NZ_CP085086.1 RefSeq gene 805947 807392 . - . ID=gene-LIO31_RS04165;Name=LIO31_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04165 NZ_CP085086.1 Protein Homology CDS 805947 807392 . - 0 ID=cds-WP_024405510.1;Parent=gene-LIO31_RS04165;Dbxref=Genbank:WP_024405510.1;Name=WP_024405510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013990079.1;locus_tag=LIO31_RS04165;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_024405510.1;transl_table=11 NZ_CP085086.1 RefSeq gene 807538 808284 . + . ID=gene-LIO31_RS04170;Name=LIO31_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04170 NZ_CP085086.1 Protein Homology CDS 807538 808284 . + 0 ID=cds-WP_014735985.1;Parent=gene-LIO31_RS04170;Dbxref=Genbank:WP_014735985.1;Name=WP_014735985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941633.1;locus_tag=LIO31_RS04170;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_014735985.1;transl_table=11 NZ_CP085086.1 RefSeq gene 808351 809013 . + . ID=gene-LIO31_RS04175;Name=LIO31_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04175 NZ_CP085086.1 Protein Homology CDS 808351 809013 . + 0 ID=cds-WP_024405509.1;Parent=gene-LIO31_RS04175;Dbxref=Genbank:WP_024405509.1;Name=WP_024405509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935348.1;locus_tag=LIO31_RS04175;product=helix-hairpin-helix domain-containing protein;protein_id=WP_024405509.1;transl_table=11 NZ_CP085086.1 RefSeq gene 808997 811234 . + . ID=gene-LIO31_RS04180;Name=LIO31_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04180 NZ_CP085086.1 Protein Homology CDS 808997 811234 . + 0 ID=cds-WP_024405508.1;Parent=gene-LIO31_RS04180;Dbxref=Genbank:WP_024405508.1;Name=WP_024405508.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636902.1;locus_tag=LIO31_RS04180;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_024405508.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 811251 811376 . + . ID=gene-LIO31_RS04185;Name=LIO31_RS04185;end_range=811376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04185;partial=true;pseudo=true;start_range=.,811251 NZ_CP085086.1 Protein Homology CDS 811251 811376 . + 0 ID=cds-LIO31_RS04185;Parent=gene-LIO31_RS04185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=811376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=LIO31_RS04185;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,811251;transl_table=11 NZ_CP085086.1 RefSeq gene 811559 812215 . + . ID=gene-LIO31_RS04190;Name=LIO31_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04190 NZ_CP085086.1 Protein Homology CDS 811559 812215 . + 0 ID=cds-WP_011922763.1;Parent=gene-LIO31_RS04190;Dbxref=Genbank:WP_011922763.1;Name=WP_011922763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256822.1;locus_tag=LIO31_RS04190;product=CBS domain-containing protein;protein_id=WP_011922763.1;transl_table=11 NZ_CP085086.1 RefSeq gene 812309 813136 . + . ID=gene-LIO31_RS04195;Name=LIO31_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04195 NZ_CP085086.1 Protein Homology CDS 812309 813136 . + 0 ID=cds-WP_011922194.1;Parent=gene-LIO31_RS04195;Dbxref=Genbank:WP_011922194.1;Name=WP_011922194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735981.1;locus_tag=LIO31_RS04195;product=hypothetical protein;protein_id=WP_011922194.1;transl_table=11 NZ_CP085086.1 RefSeq gene 813142 814413 . + . ID=gene-LIO31_RS04200;Name=LIO31_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04200 NZ_CP085086.1 Protein Homology CDS 813142 814413 . + 0 ID=cds-WP_024405507.1;Parent=gene-LIO31_RS04200;Dbxref=Genbank:WP_024405507.1;Name=WP_024405507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646958.1;locus_tag=LIO31_RS04200;product=toxic anion resistance protein;protein_id=WP_024405507.1;transl_table=11 NZ_CP085086.1 RefSeq gene 814450 815316 . - . ID=gene-LIO31_RS04205;Name=LIO31_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04205 NZ_CP085086.1 Protein Homology CDS 814450 815316 . - 0 ID=cds-WP_002935357.1;Parent=gene-LIO31_RS04205;Dbxref=Genbank:WP_002935357.1;Name=WP_002935357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935357.1;locus_tag=LIO31_RS04205;product=YitT family protein;protein_id=WP_002935357.1;transl_table=11 NZ_CP085086.1 RefSeq gene 815491 816129 . + . ID=gene-LIO31_RS04210;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LIO31_RS04210 NZ_CP085086.1 Protein Homology CDS 815491 816129 . + 0 ID=cds-WP_024379691.1;Parent=gene-LIO31_RS04210;Dbxref=Genbank:WP_024379691.1;Name=WP_024379691.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193056.1;locus_tag=LIO31_RS04210;product=dTMP kinase;protein_id=WP_024379691.1;transl_table=11 NZ_CP085086.1 RefSeq gene 816126 817010 . + . ID=gene-LIO31_RS04215;Name=LIO31_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04215 NZ_CP085086.1 Protein Homology CDS 816126 817010 . + 0 ID=cds-WP_024405505.1;Parent=gene-LIO31_RS04215;Dbxref=Genbank:WP_024405505.1;Name=WP_024405505.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935359.1;locus_tag=LIO31_RS04215;product=DNA polymerase III subunit delta';protein_id=WP_024405505.1;transl_table=11 NZ_CP085086.1 RefSeq gene 817030 817347 . + . ID=gene-LIO31_RS04220;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=LIO31_RS04220 NZ_CP085086.1 Protein Homology CDS 817030 817347 . + 0 ID=cds-WP_002935361.1;Parent=gene-LIO31_RS04220;Dbxref=Genbank:WP_002935361.1;Name=WP_002935361.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935361.1;locus_tag=LIO31_RS04220;product=DNA replication initiation control protein YabA;protein_id=WP_002935361.1;transl_table=11 NZ_CP085086.1 RefSeq gene 817349 818212 . + . ID=gene-LIO31_RS04225;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LIO31_RS04225 NZ_CP085086.1 Protein Homology CDS 817349 818212 . + 0 ID=cds-WP_024402772.1;Parent=gene-LIO31_RS04225;Dbxref=Genbank:WP_024402772.1;Name=WP_024402772.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935362.1;locus_tag=LIO31_RS04225;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_024402772.1;transl_table=11 NZ_CP085086.1 RefSeq gene 818568 819659 . + . ID=gene-LIO31_RS04230;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LIO31_RS04230 NZ_CP085086.1 Protein Homology CDS 818568 819659 . + 0 ID=cds-WP_011922200.1;Parent=gene-LIO31_RS04230;Dbxref=Genbank:WP_011922200.1;Name=WP_011922200.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922200.1;locus_tag=LIO31_RS04230;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_011922200.1;transl_table=11 NZ_CP085086.1 RefSeq gene 819659 820216 . + . ID=gene-LIO31_RS04235;Name=LIO31_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04235 NZ_CP085086.1 Protein Homology CDS 819659 820216 . + 0 ID=cds-WP_023370699.1;Parent=gene-LIO31_RS04235;Dbxref=Genbank:WP_023370699.1;Name=WP_023370699.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298948.1;locus_tag=LIO31_RS04235;product=GNAT family N-acetyltransferase;protein_id=WP_023370699.1;transl_table=11 NZ_CP085086.1 RefSeq gene 820270 821451 . + . ID=gene-LIO31_RS04240;Name=LIO31_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04240 NZ_CP085086.1 Protein Homology CDS 820270 821451 . + 0 ID=cds-WP_014638089.1;Parent=gene-LIO31_RS04240;Dbxref=Genbank:WP_014638089.1;Name=WP_014638089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636364.1;locus_tag=LIO31_RS04240;product=phosphoglycerate dehydrogenase;protein_id=WP_014638089.1;transl_table=11 NZ_CP085086.1 RefSeq gene 821454 821960 . + . ID=gene-LIO31_RS04245;Name=LIO31_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04245 NZ_CP085086.1 Protein Homology CDS 821454 821960 . + 0 ID=cds-WP_024381555.1;Parent=gene-LIO31_RS04245;Dbxref=Genbank:WP_024381555.1;Name=WP_024381555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935366.1;locus_tag=LIO31_RS04245;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_024381555.1;transl_table=11 NZ_CP085086.1 RefSeq gene 821944 822297 . + . ID=gene-LIO31_RS04250;Name=LIO31_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04250 NZ_CP085086.1 Protein Homology CDS 821944 822297 . + 0 ID=cds-WP_002935368.1;Parent=gene-LIO31_RS04250;Dbxref=Genbank:WP_002935368.1;Name=WP_002935368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935368.1;locus_tag=LIO31_RS04250;product=arsenate reductase family protein;protein_id=WP_002935368.1;transl_table=11 NZ_CP085086.1 RefSeq gene 822314 823213 . - . ID=gene-LIO31_RS04255;Name=LIO31_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04255 NZ_CP085086.1 Protein Homology CDS 822314 823213 . - 0 ID=cds-WP_023370693.1;Parent=gene-LIO31_RS04255;Dbxref=Genbank:WP_023370693.1;Name=WP_023370693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935369.1;locus_tag=LIO31_RS04255;product=cation transporter;protein_id=WP_023370693.1;transl_table=11 NZ_CP085086.1 RefSeq gene 823400 824227 . - . ID=gene-LIO31_RS04260;Name=LIO31_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04260 NZ_CP085086.1 Protein Homology CDS 823400 824227 . - 0 ID=cds-WP_012775042.1;Parent=gene-LIO31_RS04260;Dbxref=Genbank:WP_012775042.1;Name=WP_012775042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735971.1;locus_tag=LIO31_RS04260;product=exodeoxyribonuclease III;protein_id=WP_012775042.1;transl_table=11 NZ_CP085086.1 RefSeq gene 824383 826044 . + . ID=gene-LIO31_RS04265;Name=LIO31_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04265 NZ_CP085086.1 Protein Homology CDS 824383 826044 . + 0 ID=cds-WP_024405504.1;Parent=gene-LIO31_RS04265;Dbxref=Genbank:WP_024405504.1;Name=WP_024405504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298972.1;locus_tag=LIO31_RS04265;product=hypothetical protein;protein_id=WP_024405504.1;transl_table=11 NZ_CP085086.1 RefSeq gene 826204 827592 . + . ID=gene-LIO31_RS04270;Name=LIO31_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04270 NZ_CP085086.1 Protein Homology CDS 826204 827592 . + 0 ID=cds-WP_011922209.1;Parent=gene-LIO31_RS04270;Dbxref=Genbank:WP_011922209.1;Name=WP_011922209.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922209.1;locus_tag=LIO31_RS04270;product=amino acid permease;protein_id=WP_011922209.1;transl_table=11 NZ_CP085086.1 RefSeq gene 827715 828596 . + . ID=gene-LIO31_RS04275;Name=LIO31_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04275 NZ_CP085086.1 Protein Homology CDS 827715 828596 . + 0 ID=cds-WP_024401794.1;Parent=gene-LIO31_RS04275;Dbxref=Genbank:WP_024401794.1;Name=WP_024401794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935373.1;locus_tag=LIO31_RS04275;product=DUF975 family protein;protein_id=WP_024401794.1;transl_table=11 NZ_CP085086.1 RefSeq gene 828789 829625 . + . ID=gene-LIO31_RS04280;Name=LIO31_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04280 NZ_CP085086.1 Protein Homology CDS 828789 829625 . + 0 ID=cds-WP_024405502.1;Parent=gene-LIO31_RS04280;Dbxref=Genbank:WP_024405502.1;Name=WP_024405502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636366.1;locus_tag=LIO31_RS04280;product=DUF975 family protein;protein_id=WP_024405502.1;transl_table=11 NZ_CP085086.1 RefSeq gene 829643 830518 . - . ID=gene-LIO31_RS04285;Name=LIO31_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04285 NZ_CP085086.1 Protein Homology CDS 829643 830518 . - 0 ID=cds-WP_074389359.1;Parent=gene-LIO31_RS04285;Dbxref=Genbank:WP_074389359.1;Name=WP_074389359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638084.1;locus_tag=LIO31_RS04285;product=CPBP family intramembrane metalloprotease;protein_id=WP_074389359.1;transl_table=11 NZ_CP085086.1 RefSeq gene 830641 831252 . + . ID=gene-LIO31_RS04290;Name=LIO31_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04290 NZ_CP085086.1 Protein Homology CDS 830641 831252 . + 0 ID=cds-WP_024402767.1;Parent=gene-LIO31_RS04290;Dbxref=Genbank:WP_024402767.1;Name=WP_024402767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922773.1;locus_tag=LIO31_RS04290;product=DUF3885 domain-containing protein;protein_id=WP_024402767.1;transl_table=11 NZ_CP085086.1 RefSeq gene 832245 834281 . + . ID=gene-LIO31_RS04300;Name=LIO31_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04300 NZ_CP085086.1 Protein Homology CDS 832245 834281 . + 0 ID=cds-WP_226960933.1;Parent=gene-LIO31_RS04300;Dbxref=Genbank:WP_226960933.1;Name=WP_226960933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100979.1;locus_tag=LIO31_RS04300;product=DNA methyltransferase;protein_id=WP_226960933.1;transl_table=11 NZ_CP085086.1 RefSeq gene 834285 837377 . + . ID=gene-LIO31_RS04305;Name=LIO31_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04305 NZ_CP085086.1 Protein Homology CDS 834285 837377 . + 0 ID=cds-WP_074413350.1;Parent=gene-LIO31_RS04305;Dbxref=Genbank:WP_074413350.1;Name=WP_074413350.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917230.1;locus_tag=LIO31_RS04305;product=DEAD/DEAH box helicase family protein;protein_id=WP_074413350.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 837726 838239 . + . ID=gene-LIO31_RS04310;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=LIO31_RS04310;pseudo=true NZ_CP085086.1 Protein Homology CDS 837726 838239 . + 0 ID=cds-LIO31_RS04310;Parent=gene-LIO31_RS04310;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775157.1;locus_tag=LIO31_RS04310;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 838402 840120 . - . ID=gene-LIO31_RS04315;Name=LIO31_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04315 NZ_CP085086.1 Protein Homology CDS 838402 840120 . - 0 ID=cds-WP_024408131.1;Parent=gene-LIO31_RS04315;Dbxref=Genbank:WP_024408131.1;Name=WP_024408131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943598.1;locus_tag=LIO31_RS04315;product=phospho-sugar mutase;protein_id=WP_024408131.1;transl_table=11 NZ_CP085086.1 RefSeq gene 840211 840780 . - . ID=gene-LIO31_RS04320;Name=LIO31_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04320 NZ_CP085086.1 Protein Homology CDS 840211 840780 . - 0 ID=cds-WP_002935390.1;Parent=gene-LIO31_RS04320;Dbxref=Genbank:WP_002935390.1;Name=WP_002935390.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730330.1;locus_tag=LIO31_RS04320;product=ECF transporter S component;protein_id=WP_002935390.1;transl_table=11 NZ_CP085086.1 RefSeq gene 840767 841315 . - . ID=gene-LIO31_RS04325;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=LIO31_RS04325 NZ_CP085086.1 Protein Homology CDS 840767 841315 . - 0 ID=cds-WP_002935392.1;Parent=gene-LIO31_RS04325;Dbxref=Genbank:WP_002935392.1;Name=WP_002935392.1;Ontology_term=GO:0015937,GO:0004633;gbkey=CDS;gene=coaC;go_function=phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935392.1;locus_tag=LIO31_RS04325;product=phosphopantothenoylcysteine decarboxylase;protein_id=WP_002935392.1;transl_table=11 NZ_CP085086.1 RefSeq gene 841308 842003 . - . ID=gene-LIO31_RS04330;Name=LIO31_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04330 NZ_CP085086.1 Protein Homology CDS 841308 842003 . - 0 ID=cds-WP_022540619.1;Parent=gene-LIO31_RS04330;Dbxref=Genbank:WP_022540619.1;Name=WP_022540619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646940.1;locus_tag=LIO31_RS04330;product=phosphopantothenate--cysteine ligase;protein_id=WP_022540619.1;transl_table=11 NZ_CP085086.1 RefSeq gene 842507 844177 . + . ID=gene-LIO31_RS04335;Name=LIO31_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04335 NZ_CP085086.1 Protein Homology CDS 842507 844177 . + 0 ID=cds-WP_074389841.1;Parent=gene-LIO31_RS04335;Dbxref=Genbank:WP_074389841.1;Name=WP_074389841.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803354.1;locus_tag=LIO31_RS04335;product=formate--tetrahydrofolate ligase;protein_id=WP_074389841.1;transl_table=11 NZ_CP085086.1 RefSeq gene 844217 845026 . - . ID=gene-LIO31_RS04340;Name=LIO31_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04340 NZ_CP085086.1 Protein Homology CDS 844217 845026 . - 0 ID=cds-WP_074389842.1;Parent=gene-LIO31_RS04340;Dbxref=Genbank:WP_074389842.1;Name=WP_074389842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381403.1;locus_tag=LIO31_RS04340;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_074389842.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 845243 846554 . + . ID=gene-LIO31_RS04345;Name=LIO31_RS04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04345;pseudo=true NZ_CP085086.1 Protein Homology CDS 845243 846554 . + 0 ID=cds-LIO31_RS04345;Parent=gene-LIO31_RS04345;Note=frameshifted%3B internal stop;Ontology_term=GO:0045454,GO:0016668,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015631733.1;locus_tag=LIO31_RS04345;product=FAD-containing oxidoreductase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 846647 849325 . + . ID=gene-LIO31_RS04350;Name=LIO31_RS04350;end_range=849325,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04350;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 846647 849325 . + 0 ID=cds-LIO31_RS04350;Parent=gene-LIO31_RS04350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006304,GO:0003677,GO:0004519;end_range=849325,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922226.1;locus_tag=LIO31_RS04350;partial=true;product=type I restriction endonuclease;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 849541 849912 . + . ID=gene-LIO31_RS04355;Name=LIO31_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04355 NZ_CP085086.1 GeneMarkS-2+ CDS 849541 849912 . + 0 ID=cds-WP_011922781.1;Parent=gene-LIO31_RS04355;Dbxref=Genbank:WP_011922781.1;Name=WP_011922781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS04355;product=hypothetical protein;protein_id=WP_011922781.1;transl_table=11 NZ_CP085086.1 RefSeq gene 849975 850751 . - . ID=gene-LIO31_RS04360;Name=LIO31_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04360 NZ_CP085086.1 Protein Homology CDS 849975 850751 . - 0 ID=cds-WP_012775631.1;Parent=gene-LIO31_RS04360;Dbxref=Genbank:WP_012775631.1;Name=WP_012775631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775631.1;locus_tag=LIO31_RS04360;product=DUF6261 family protein;protein_id=WP_012775631.1;transl_table=11 NZ_CP085086.1 RefSeq gene 851103 851720 . + . ID=gene-LIO31_RS04365;Name=LIO31_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04365 NZ_CP085086.1 Protein Homology CDS 851103 851720 . + 0 ID=cds-WP_074389843.1;Parent=gene-LIO31_RS04365;Dbxref=Genbank:WP_074389843.1;Name=WP_074389843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922233.1;locus_tag=LIO31_RS04365;product=DUF5052 family protein;protein_id=WP_074389843.1;transl_table=11 NZ_CP085086.1 RefSeq gene 851721 852230 . + . ID=gene-LIO31_RS04370;Name=LIO31_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04370 NZ_CP085086.1 Protein Homology CDS 851721 852230 . + 0 ID=cds-WP_226960934.1;Parent=gene-LIO31_RS04370;Dbxref=Genbank:WP_226960934.1;Name=WP_226960934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935404.1;locus_tag=LIO31_RS04370;product=GNAT family N-acetyltransferase;protein_id=WP_226960934.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 852220 852873 . + . ID=gene-LIO31_RS04375;Name=LIO31_RS04375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04375;pseudo=true NZ_CP085086.1 Protein Homology CDS 852220 852873 . + 0 ID=cds-LIO31_RS04375;Parent=gene-LIO31_RS04375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754918.1;locus_tag=LIO31_RS04375;product=DNA alkylation repair protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 852882 853169 . + . ID=gene-LIO31_RS04380;Name=LIO31_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04380 NZ_CP085086.1 Protein Homology CDS 852882 853169 . + 0 ID=cds-WP_011922237.1;Parent=gene-LIO31_RS04380;Dbxref=Genbank:WP_011922237.1;Name=WP_011922237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646933.1;locus_tag=LIO31_RS04380;product=DUF1905 domain-containing protein;protein_id=WP_011922237.1;transl_table=11 NZ_CP085086.1 RefSeq gene 853872 854648 . - . ID=gene-LIO31_RS04385;Name=LIO31_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04385 NZ_CP085086.1 Protein Homology CDS 853872 854648 . - 0 ID=cds-WP_024405492.1;Parent=gene-LIO31_RS04385;Dbxref=Genbank:WP_024405492.1;Name=WP_024405492.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019321467.1;locus_tag=LIO31_RS04385;product=glycyl-radical enzyme activating protein;protein_id=WP_024405492.1;transl_table=11 NZ_CP085086.1 RefSeq gene 854780 855523 . + . ID=gene-LIO31_RS04390;Name=LIO31_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04390 NZ_CP085086.1 Protein Homology CDS 854780 855523 . + 0 ID=cds-WP_011922238.1;Parent=gene-LIO31_RS04390;Dbxref=Genbank:WP_011922238.1;Name=WP_011922238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922238.1;locus_tag=LIO31_RS04390;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_011922238.1;transl_table=11 NZ_CP085086.1 RefSeq gene 855536 856510 . + . ID=gene-LIO31_RS04395;Name=LIO31_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04395 NZ_CP085086.1 Protein Homology CDS 855536 856510 . + 0 ID=cds-WP_014735951.1;Parent=gene-LIO31_RS04395;Dbxref=Genbank:WP_014735951.1;Name=WP_014735951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935426.1;locus_tag=LIO31_RS04395;product=sugar-binding transcriptional regulator;protein_id=WP_014735951.1;transl_table=11 NZ_CP085086.1 RefSeq gene 856698 857021 . + . ID=gene-LIO31_RS04400;Name=LIO31_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04400 NZ_CP085086.1 Protein Homology CDS 856698 857021 . + 0 ID=cds-WP_011922241.1;Parent=gene-LIO31_RS04400;Dbxref=Genbank:WP_011922241.1;Name=WP_011922241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935429.1;locus_tag=LIO31_RS04400;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_011922241.1;transl_table=11 NZ_CP085086.1 RefSeq gene 857054 857359 . + . ID=gene-LIO31_RS04405;Name=LIO31_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04405 NZ_CP085086.1 Protein Homology CDS 857054 857359 . + 0 ID=cds-WP_011922242.1;Parent=gene-LIO31_RS04405;Dbxref=Genbank:WP_011922242.1;Name=WP_011922242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922242.1;locus_tag=LIO31_RS04405;product=PTS sugar transporter subunit IIB;protein_id=WP_011922242.1;transl_table=11 NZ_CP085086.1 RefSeq gene 857372 858673 . + . ID=gene-LIO31_RS04410;Name=LIO31_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04410 NZ_CP085086.1 Protein Homology CDS 857372 858673 . + 0 ID=cds-WP_024405490.1;Parent=gene-LIO31_RS04410;Dbxref=Genbank:WP_024405490.1;Name=WP_024405490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935431.1;locus_tag=LIO31_RS04410;product=PTS sugar transporter subunit IIC;protein_id=WP_024405490.1;transl_table=11 NZ_CP085086.1 RefSeq gene 858825 861269 . + . ID=gene-LIO31_RS04415;Name=LIO31_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04415 NZ_CP085086.1 Protein Homology CDS 858825 861269 . + 0 ID=cds-WP_024405489.1;Parent=gene-LIO31_RS04415;Dbxref=Genbank:WP_024405489.1;Name=WP_024405489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909698.1;locus_tag=LIO31_RS04415;product=glycyl radical protein;protein_id=WP_024405489.1;transl_table=11 NZ_CP085086.1 RefSeq gene 861284 861952 . + . ID=gene-LIO31_RS04420;Name=LIO31_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04420 NZ_CP085086.1 Protein Homology CDS 861284 861952 . + 0 ID=cds-WP_024382948.1;Parent=gene-LIO31_RS04420;Dbxref=Genbank:WP_024382948.1;Name=WP_024382948.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898502.1;locus_tag=LIO31_RS04420;product=fructose-6-phosphate aldolase;protein_id=WP_024382948.1;transl_table=11 NZ_CP085086.1 RefSeq gene 861984 862940 . + . ID=gene-LIO31_RS04425;Name=LIO31_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04425 NZ_CP085086.1 Protein Homology CDS 861984 862940 . + 0 ID=cds-WP_014735946.1;Parent=gene-LIO31_RS04425;Dbxref=Genbank:WP_014735946.1;Name=WP_014735946.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646929.1;locus_tag=LIO31_RS04425;product=iron-containing alcohol dehydrogenase;protein_id=WP_014735946.1;transl_table=11 NZ_CP085086.1 RefSeq gene 863061 864155 . + . ID=gene-LIO31_RS04430;Name=LIO31_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04430 NZ_CP085086.1 Protein Homology CDS 863061 864155 . + 0 ID=cds-WP_024405487.1;Parent=gene-LIO31_RS04430;Dbxref=Genbank:WP_024405487.1;Name=WP_024405487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910745.1;locus_tag=LIO31_RS04430;product=glycerol dehydrogenase;protein_id=WP_024405487.1;transl_table=11 NZ_CP085086.1 RefSeq gene 864324 865400 . + . ID=gene-LIO31_RS04435;Name=LIO31_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04435 NZ_CP085086.1 Protein Homology CDS 864324 865400 . + 0 ID=cds-WP_014735944.1;Parent=gene-LIO31_RS04435;Dbxref=Genbank:WP_014735944.1;Name=WP_014735944.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=LIO31_RS04435;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_014735944.1;transl_table=11 NZ_CP085086.1 RefSeq gene 865473 866408 . + . ID=gene-LIO31_RS04440;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LIO31_RS04440 NZ_CP085086.1 Protein Homology CDS 865473 866408 . + 0 ID=cds-WP_024400438.1;Parent=gene-LIO31_RS04440;Dbxref=Genbank:WP_024400438.1;Name=WP_024400438.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935444.1;locus_tag=LIO31_RS04440;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_024400438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 866887 868239 . + . ID=gene-LIO31_RS04445;Name=LIO31_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04445 NZ_CP085086.1 Protein Homology CDS 866887 868239 . + 0 ID=cds-WP_024405486.1;Parent=gene-LIO31_RS04445;Dbxref=Genbank:WP_024405486.1;Name=WP_024405486.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735942.1;locus_tag=LIO31_RS04445;product=FAD-dependent oxidoreductase;protein_id=WP_024405486.1;transl_table=11 NZ_CP085086.1 RefSeq gene 868229 869692 . + . ID=gene-LIO31_RS04450;Name=LIO31_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04450 NZ_CP085086.1 Protein Homology CDS 868229 869692 . + 0 ID=cds-WP_024405485.1;Parent=gene-LIO31_RS04450;Dbxref=Genbank:WP_024405485.1;Name=WP_024405485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775047.1;locus_tag=LIO31_RS04450;product=helix-turn-helix domain-containing protein;protein_id=WP_024405485.1;transl_table=11 NZ_CP085086.1 RefSeq gene 869922 871436 . + . ID=gene-LIO31_RS04455;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LIO31_RS04455 NZ_CP085086.1 Protein Homology CDS 869922 871436 . + 0 ID=cds-WP_024405484.1;Parent=gene-LIO31_RS04455;Dbxref=Genbank:WP_024405484.1;Name=WP_024405484.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917235.1;locus_tag=LIO31_RS04455;product=glycerol kinase GlpK;protein_id=WP_024405484.1;transl_table=11 NZ_CP085086.1 RefSeq gene 871512 873341 . + . ID=gene-LIO31_RS04460;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=LIO31_RS04460 NZ_CP085086.1 Protein Homology CDS 871512 873341 . + 0 ID=cds-WP_074389846.1;Parent=gene-LIO31_RS04460;Dbxref=Genbank:WP_074389846.1;Name=WP_074389846.1;Ontology_term=GO:0006072,GO:0004368;gbkey=CDS;gene=glpO;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646923.1;locus_tag=LIO31_RS04460;product=type 1 glycerol-3-phosphate oxidase;protein_id=WP_074389846.1;transl_table=11 NZ_CP085086.1 RefSeq gene 873355 874062 . + . ID=gene-LIO31_RS04465;Name=LIO31_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04465 NZ_CP085086.1 Protein Homology CDS 873355 874062 . + 0 ID=cds-WP_012775050.1;Parent=gene-LIO31_RS04465;Dbxref=Genbank:WP_012775050.1;Name=WP_012775050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775050.1;locus_tag=LIO31_RS04465;product=aquaporin family protein;protein_id=WP_012775050.1;transl_table=11 NZ_CP085086.1 RefSeq gene 874194 875144 . + . ID=gene-LIO31_RS04470;Name=LIO31_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04470 NZ_CP085086.1 Protein Homology CDS 874194 875144 . + 0 ID=cds-WP_011922256.1;Parent=gene-LIO31_RS04470;Dbxref=Genbank:WP_011922256.1;Name=WP_011922256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646921.1;locus_tag=LIO31_RS04470;product=2%2C6-dichloro-p-hydroquinone 1%2C2-dioxygenase;protein_id=WP_011922256.1;transl_table=11 NZ_CP085086.1 RefSeq gene 875367 875759 . + . ID=gene-LIO31_RS04475;Name=LIO31_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04475 NZ_CP085086.1 Protein Homology CDS 875367 875759 . + 0 ID=cds-WP_011922258.1;Parent=gene-LIO31_RS04475;Dbxref=Genbank:WP_011922258.1;Name=WP_011922258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922258.1;locus_tag=LIO31_RS04475;product=hypothetical protein;protein_id=WP_011922258.1;transl_table=11 NZ_CP085086.1 RefSeq gene 875784 877574 . - . ID=gene-LIO31_RS04480;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=LIO31_RS04480 NZ_CP085086.1 Protein Homology CDS 875784 877574 . - 0 ID=cds-WP_226960935.1;Parent=gene-LIO31_RS04480;Dbxref=Genbank:WP_226960935.1;Name=WP_226960935.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646919.1;locus_tag=LIO31_RS04480;product=oligoendopeptidase F;protein_id=WP_226960935.1;transl_table=11 NZ_CP085086.1 RefSeq gene 877741 878079 . + . ID=gene-LIO31_RS04485;Name=LIO31_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04485 NZ_CP085086.1 Protein Homology CDS 877741 878079 . + 0 ID=cds-WP_002935455.1;Parent=gene-LIO31_RS04485;Dbxref=Genbank:WP_002935455.1;Name=WP_002935455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002264292.1;locus_tag=LIO31_RS04485;product=ATP cone domain-containing protein;protein_id=WP_002935455.1;transl_table=11 NZ_CP085086.1 RefSeq gene 878264 879631 . + . ID=gene-LIO31_RS04490;Name=LIO31_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04490 NZ_CP085086.1 Protein Homology CDS 878264 879631 . + 0 ID=cds-WP_012775051.1;Parent=gene-LIO31_RS04490;Dbxref=Genbank:WP_012775051.1;Name=WP_012775051.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612254.1;locus_tag=LIO31_RS04490;product=FAD-dependent oxidoreductase;protein_id=WP_012775051.1;transl_table=11 NZ_CP085086.1 RefSeq gene 879919 882198 . + . ID=gene-LIO31_RS04495;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=LIO31_RS04495 NZ_CP085086.1 Protein Homology CDS 879919 882198 . + 0 ID=cds-WP_029752275.1;Parent=gene-LIO31_RS04495;Dbxref=Genbank:WP_029752275.1;Name=WP_029752275.1;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638906.1;locus_tag=LIO31_RS04495;product=DNA helicase PcrA;protein_id=WP_029752275.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 882261 882350 . + . ID=id-NZ_CP085086.1:882261..882350;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 882684 883331 . + . ID=gene-LIO31_RS04500;Name=LIO31_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04500 NZ_CP085086.1 Protein Homology CDS 882684 883331 . + 0 ID=cds-WP_029752276.1;Parent=gene-LIO31_RS04500;Dbxref=Genbank:WP_029752276.1;Name=WP_029752276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922263.1;locus_tag=LIO31_RS04500;product=HAD hydrolase-like protein;protein_id=WP_029752276.1;transl_table=11 NZ_CP085086.1 RefSeq gene 883328 884125 . + . ID=gene-LIO31_RS04505;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LIO31_RS04505 NZ_CP085086.1 Protein Homology CDS 883328 884125 . + 0 ID=cds-WP_024381770.1;Parent=gene-LIO31_RS04505;Dbxref=Genbank:WP_024381770.1;Name=WP_024381770.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922264.1;locus_tag=LIO31_RS04505;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_024381770.1;transl_table=11 NZ_CP085086.1 RefSeq gene 884130 884915 . + . ID=gene-LIO31_RS04510;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=LIO31_RS04510 NZ_CP085086.1 Protein Homology CDS 884130 884915 . + 0 ID=cds-WP_074389108.1;Parent=gene-LIO31_RS04510;Dbxref=Genbank:WP_074389108.1;Name=WP_074389108.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922265.1;locus_tag=LIO31_RS04510;product=hydroxyethylthiazole kinase;protein_id=WP_074389108.1;transl_table=11 NZ_CP085086.1 RefSeq gene 884908 885642 . + . ID=gene-LIO31_RS04515;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LIO31_RS04515 NZ_CP085086.1 Protein Homology CDS 884908 885642 . + 0 ID=cds-WP_226960936.1;Parent=gene-LIO31_RS04515;Dbxref=Genbank:WP_226960936.1;Name=WP_226960936.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638907.1;locus_tag=LIO31_RS04515;product=thiamine phosphate synthase;protein_id=WP_226960936.1;transl_table=11 NZ_CP085086.1 RefSeq gene 886119 886754 . + . ID=gene-LIO31_RS04520;Name=LIO31_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04520 NZ_CP085086.1 Protein Homology CDS 886119 886754 . + 0 ID=cds-WP_226960937.1;Parent=gene-LIO31_RS04520;Dbxref=Genbank:WP_226960937.1;Name=WP_226960937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775052.1;locus_tag=LIO31_RS04520;product=cyclic nucleotide-binding domain-containing protein;protein_id=WP_226960937.1;transl_table=11 NZ_CP085086.1 RefSeq gene 886766 887512 . + . ID=gene-LIO31_RS04525;Name=LIO31_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04525 NZ_CP085086.1 Protein Homology CDS 886766 887512 . + 0 ID=cds-WP_011922794.1;Parent=gene-LIO31_RS04525;Dbxref=Genbank:WP_011922794.1;Name=WP_011922794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922794.1;locus_tag=LIO31_RS04525;product=nucleoside phosphorylase;protein_id=WP_011922794.1;transl_table=11 NZ_CP085086.1 RefSeq gene 887547 888128 . + . ID=gene-LIO31_RS04530;Name=LIO31_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04530 NZ_CP085086.1 Protein Homology CDS 887547 888128 . + 0 ID=cds-WP_223375669.1;Parent=gene-LIO31_RS04530;Dbxref=Genbank:WP_223375669.1;Name=WP_223375669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922270.1;locus_tag=LIO31_RS04530;product=ECF transporter S component;protein_id=WP_223375669.1;transl_table=11 NZ_CP085086.1 RefSeq gene 888139 888903 . + . ID=gene-LIO31_RS04535;Name=LIO31_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04535 NZ_CP085086.1 Protein Homology CDS 888139 888903 . + 0 ID=cds-WP_014635952.1;Parent=gene-LIO31_RS04535;Dbxref=Genbank:WP_014635952.1;Name=WP_014635952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922271.1;locus_tag=LIO31_RS04535;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_014635952.1;transl_table=11 NZ_CP085086.1 RefSeq gene 888903 889757 . + . ID=gene-LIO31_RS04540;Name=LIO31_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04540 NZ_CP085086.1 Protein Homology CDS 888903 889757 . + 0 ID=cds-WP_011922272.1;Parent=gene-LIO31_RS04540;Dbxref=Genbank:WP_011922272.1;Name=WP_011922272.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922272.1;locus_tag=LIO31_RS04540;product=ATP-binding cassette domain-containing protein;protein_id=WP_011922272.1;transl_table=11 NZ_CP085086.1 RefSeq gene 889754 890551 . + . ID=gene-LIO31_RS04545;Name=LIO31_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04545 NZ_CP085086.1 Protein Homology CDS 889754 890551 . + 0 ID=cds-WP_011922273.1;Parent=gene-LIO31_RS04545;Dbxref=Genbank:WP_011922273.1;Name=WP_011922273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922273.1;locus_tag=LIO31_RS04545;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_011922273.1;transl_table=11 NZ_CP085086.1 RefSeq gene 891173 891856 . + . ID=gene-LIO31_RS04550;Name=LIO31_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04550 NZ_CP085086.1 Protein Homology CDS 891173 891856 . + 0 ID=cds-WP_012775054.1;Parent=gene-LIO31_RS04550;Dbxref=Genbank:WP_012775054.1;Name=WP_012775054.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775054.1;locus_tag=LIO31_RS04550;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_012775054.1;transl_table=11 NZ_CP085086.1 RefSeq gene 891935 892699 . + . ID=gene-LIO31_RS04555;Name=LIO31_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04555 NZ_CP085086.1 Protein Homology CDS 891935 892699 . + 0 ID=cds-WP_011922275.1;Parent=gene-LIO31_RS04555;Dbxref=Genbank:WP_011922275.1;Name=WP_011922275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646912.1;locus_tag=LIO31_RS04555;product=CPBP family intramembrane metalloprotease;protein_id=WP_011922275.1;transl_table=11 NZ_CP085086.1 RefSeq gene 892942 893193 . + . ID=gene-LIO31_RS04560;Name=LIO31_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04560 NZ_CP085086.1 Protein Homology CDS 892942 893193 . + 0 ID=cds-WP_012775055.1;Parent=gene-LIO31_RS04560;Dbxref=Genbank:WP_012775055.1;Name=WP_012775055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935464.1;locus_tag=LIO31_RS04560;product=phage holin;protein_id=WP_012775055.1;transl_table=11 NZ_CP085086.1 RefSeq gene 893673 894965 . - . ID=gene-LIO31_RS04565;Name=LIO31_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04565 NZ_CP085086.1 Protein Homology CDS 893673 894965 . - 0 ID=cds-WP_171840749.1-4;Parent=gene-LIO31_RS04565;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS04565;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 895317 896072 . + . ID=gene-LIO31_RS04570;Name=ldcB;gbkey=Gene;gene=ldcB;gene_biotype=protein_coding;locus_tag=LIO31_RS04570 NZ_CP085086.1 Protein Homology CDS 895317 896072 . + 0 ID=cds-WP_012775056.1;Parent=gene-LIO31_RS04570;Dbxref=Genbank:WP_012775056.1;Name=WP_012775056.1;gbkey=CDS;gene=ldcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775056.1;locus_tag=LIO31_RS04570;product=LD-carboxypeptidase LdcB/DacB;protein_id=WP_012775056.1;transl_table=11 NZ_CP085086.1 RefSeq gene 896161 896604 . + . ID=gene-LIO31_RS04575;Name=LIO31_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04575 NZ_CP085086.1 Protein Homology CDS 896161 896604 . + 0 ID=cds-WP_002935466.1;Parent=gene-LIO31_RS04575;Dbxref=Genbank:WP_002935466.1;Name=WP_002935466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935466.1;locus_tag=LIO31_RS04575;product=VOC family protein;protein_id=WP_002935466.1;transl_table=11 NZ_CP085086.1 RefSeq gene 896632 898242 . - . ID=gene-LIO31_RS04580;Name=LIO31_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04580 NZ_CP085086.1 Protein Homology CDS 896632 898242 . - 0 ID=cds-WP_226960938.1;Parent=gene-LIO31_RS04580;Dbxref=Genbank:WP_226960938.1;Name=WP_226960938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638048.1;locus_tag=LIO31_RS04580;product=permease;protein_id=WP_226960938.1;transl_table=11 NZ_CP085086.1 RefSeq gene 898239 898982 . - . ID=gene-LIO31_RS04585;Name=LIO31_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04585 NZ_CP085086.1 Protein Homology CDS 898239 898982 . - 0 ID=cds-WP_011922278.1;Parent=gene-LIO31_RS04585;Dbxref=Genbank:WP_011922278.1;Name=WP_011922278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922278.1;locus_tag=LIO31_RS04585;product=ABC transporter ATP-binding protein;protein_id=WP_011922278.1;transl_table=11 NZ_CP085086.1 RefSeq gene 899222 901006 . + . ID=gene-LIO31_RS04590;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LIO31_RS04590 NZ_CP085086.1 Protein Homology CDS 899222 901006 . + 0 ID=cds-WP_012775432.1;Parent=gene-LIO31_RS04590;Dbxref=Genbank:WP_012775432.1;Name=WP_012775432.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775432.1;locus_tag=LIO31_RS04590;product=excinuclease ABC subunit UvrC;protein_id=WP_012775432.1;transl_table=11 NZ_CP085086.1 RefSeq gene 901063 901191 . + . ID=gene-LIO31_RS04595;Name=LIO31_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04595 NZ_CP085086.1 Protein Homology CDS 901063 901191 . + 0 ID=cds-WP_002935474.1;Parent=gene-LIO31_RS04595;Dbxref=Genbank:WP_002935474.1;Name=WP_002935474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935474.1;locus_tag=LIO31_RS04595;product=DUF4044 domain-containing protein;protein_id=WP_002935474.1;transl_table=11 NZ_CP085086.1 RefSeq gene 901395 902708 . + . ID=gene-LIO31_RS04600;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LIO31_RS04600 NZ_CP085086.1 Protein Homology CDS 901395 902708 . + 0 ID=cds-WP_011922805.1;Parent=gene-LIO31_RS04600;Dbxref=Genbank:WP_011922805.1;Name=WP_011922805.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061643.1;locus_tag=LIO31_RS04600;product=GTPase ObgE;protein_id=WP_011922805.1;transl_table=11 NZ_CP085086.1 RefSeq gene 903082 903246 . + . ID=gene-LIO31_RS04605;Name=LIO31_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04605 NZ_CP085086.1 Protein Homology CDS 903082 903246 . + 0 ID=cds-WP_012775058.1;Parent=gene-LIO31_RS04605;Dbxref=Genbank:WP_012775058.1;Name=WP_012775058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935476.1;locus_tag=LIO31_RS04605;product=hypothetical protein;protein_id=WP_012775058.1;transl_table=11 NZ_CP085086.1 RefSeq gene 903610 906993 . + . ID=gene-LIO31_RS04610;Name=LIO31_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04610 NZ_CP085086.1 Protein Homology CDS 903610 906993 . + 0 ID=cds-WP_074389867.1;Parent=gene-LIO31_RS04610;Dbxref=Genbank:WP_074389867.1;Name=WP_074389867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775059.1;locus_tag=LIO31_RS04610;product=MucBP domain-containing protein;protein_id=WP_074389867.1;transl_table=11 NZ_CP085086.1 RefSeq gene 907284 910550 . + . ID=gene-LIO31_RS04615;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=LIO31_RS04615 NZ_CP085086.1 Protein Homology CDS 907284 910550 . + 0 ID=cds-WP_074412208.1;Parent=gene-LIO31_RS04615;Dbxref=Genbank:WP_074412208.1;Name=WP_074412208.1;Ontology_term=GO:0000724;gbkey=CDS;gene=rexB;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646904.1;locus_tag=LIO31_RS04615;product=ATP-dependent nuclease subunit B;protein_id=WP_074412208.1;transl_table=11 NZ_CP085086.1 RefSeq gene 910550 914200 . + . ID=gene-LIO31_RS04620;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=LIO31_RS04620 NZ_CP085086.1 Protein Homology CDS 910550 914200 . + 0 ID=cds-WP_171840759.1;Parent=gene-LIO31_RS04620;Dbxref=Genbank:WP_171840759.1;Name=WP_171840759.1;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638042.1;locus_tag=LIO31_RS04620;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_171840759.1;transl_table=11 NZ_CP085086.1 RefSeq gene 914322 914966 . - . ID=gene-LIO31_RS04625;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LIO31_RS04625 NZ_CP085086.1 Protein Homology CDS 914322 914966 . - 0 ID=cds-WP_012775062.1;Parent=gene-LIO31_RS04625;Dbxref=Genbank:WP_012775062.1;Name=WP_012775062.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638041.1;locus_tag=LIO31_RS04625;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_012775062.1;transl_table=11 NZ_CP085086.1 RefSeq gene 915109 917052 . + . ID=gene-LIO31_RS04630;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LIO31_RS04630 NZ_CP085086.1 Protein Homology CDS 915109 917052 . + 0 ID=cds-WP_012775063.1;Parent=gene-LIO31_RS04630;Dbxref=Genbank:WP_012775063.1;Name=WP_012775063.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604618.1;locus_tag=LIO31_RS04630;product=DNA topoisomerase IV subunit B;protein_id=WP_012775063.1;transl_table=11 NZ_CP085086.1 RefSeq gene 917082 917894 . + . ID=gene-LIO31_RS04635;Name=LIO31_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04635 NZ_CP085086.1 Protein Homology CDS 917082 917894 . + 0 ID=cds-WP_011922289.1;Parent=gene-LIO31_RS04635;Dbxref=Genbank:WP_011922289.1;Name=WP_011922289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922289.1;locus_tag=LIO31_RS04635;product=hypothetical protein;protein_id=WP_011922289.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 918075 918681 . + . ID=gene-LIO31_RS04640;Name=LIO31_RS04640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04640;pseudo=true NZ_CP085086.1 Protein Homology CDS 918075 918681 . + 0 ID=cds-LIO31_RS04640;Parent=gene-LIO31_RS04640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002395946.1;locus_tag=LIO31_RS04640;product=Fic family protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 918714 919217 . + . ID=gene-LIO31_RS04645;Name=LIO31_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04645 NZ_CP085086.1 Protein Homology CDS 918714 919217 . + 0 ID=cds-WP_012775064.1;Parent=gene-LIO31_RS04645;Dbxref=Genbank:WP_012775064.1;Name=WP_012775064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735915.1;locus_tag=LIO31_RS04645;product=YkvA family protein;protein_id=WP_012775064.1;transl_table=11 NZ_CP085086.1 RefSeq gene 919220 919672 . + . ID=gene-LIO31_RS04650;Name=LIO31_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04650 NZ_CP085086.1 Protein Homology CDS 919220 919672 . + 0 ID=cds-WP_012775065.1;Parent=gene-LIO31_RS04650;Dbxref=Genbank:WP_012775065.1;Name=WP_012775065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935488.1;locus_tag=LIO31_RS04650;product=hypothetical protein;protein_id=WP_012775065.1;transl_table=11 NZ_CP085086.1 RefSeq gene 919873 922326 . + . ID=gene-LIO31_RS04655;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LIO31_RS04655 NZ_CP085086.1 Protein Homology CDS 919873 922326 . + 0 ID=cds-WP_012775433.1;Parent=gene-LIO31_RS04655;Dbxref=Genbank:WP_012775433.1;Name=WP_012775433.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638038.1;locus_tag=LIO31_RS04655;product=DNA topoisomerase IV subunit A;protein_id=WP_012775433.1;transl_table=11 NZ_CP085086.1 RefSeq gene 922389 923006 . + . ID=gene-LIO31_RS04660;Name=LIO31_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04660 NZ_CP085086.1 Protein Homology CDS 922389 923006 . + 0 ID=cds-WP_012775066.1;Parent=gene-LIO31_RS04660;Dbxref=Genbank:WP_012775066.1;Name=WP_012775066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735911.1;locus_tag=LIO31_RS04660;product=DUF4230 domain-containing protein;protein_id=WP_012775066.1;transl_table=11 NZ_CP085086.1 RefSeq gene 923117 924139 . + . ID=gene-LIO31_RS04665;Name=LIO31_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04665 NZ_CP085086.1 Protein Homology CDS 923117 924139 . + 0 ID=cds-WP_012775067.1;Parent=gene-LIO31_RS04665;Dbxref=Genbank:WP_012775067.1;Name=WP_012775067.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730267.1;locus_tag=LIO31_RS04665;product=branched-chain amino acid aminotransferase;protein_id=WP_012775067.1;transl_table=11 NZ_CP085086.1 RefSeq gene 924206 924439 . + . ID=gene-LIO31_RS04670;Name=LIO31_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04670 NZ_CP085086.1 Protein Homology CDS 924206 924439 . + 0 ID=cds-WP_012775068.1;Parent=gene-LIO31_RS04670;Dbxref=Genbank:WP_012775068.1;Name=WP_012775068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775068.1;locus_tag=LIO31_RS04670;product=DUF2969 domain-containing protein;protein_id=WP_012775068.1;transl_table=11 NZ_CP085086.1 RefSeq gene 924491 924571 . + . ID=gene-LIO31_RS04675;Name=LIO31_RS04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS04675 NZ_CP085086.1 tRNAscan-SE tRNA 924491 924571 . + . ID=rna-LIO31_RS04675;Parent=gene-LIO31_RS04675;anticodon=(pos:924525..924527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04675;product=tRNA-Tyr NZ_CP085086.1 tRNAscan-SE exon 924491 924571 . + . ID=exon-LIO31_RS04675-1;Parent=rna-LIO31_RS04675;anticodon=(pos:924525..924527);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04675;product=tRNA-Tyr NZ_CP085086.1 RefSeq gene 924847 924918 . + . ID=gene-LIO31_RS04680;Name=LIO31_RS04680;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS04680 NZ_CP085086.1 tRNAscan-SE tRNA 924847 924918 . + . ID=rna-LIO31_RS04680;Parent=gene-LIO31_RS04680;anticodon=(pos:924879..924881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04680;product=tRNA-Gln NZ_CP085086.1 tRNAscan-SE exon 924847 924918 . + . ID=exon-LIO31_RS04680-1;Parent=rna-LIO31_RS04680;anticodon=(pos:924879..924881);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04680;product=tRNA-Gln NZ_CP085086.1 RefSeq gene 925042 926247 . + . ID=gene-LIO31_RS04685;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LIO31_RS04685 NZ_CP085086.1 Protein Homology CDS 925042 926247 . + 0 ID=cds-WP_074389871.1;Parent=gene-LIO31_RS04685;Dbxref=Genbank:WP_074389871.1;Name=WP_074389871.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=LIO31_RS04685;product=30S ribosomal protein S1;protein_id=WP_074389871.1;transl_table=11 NZ_CP085086.1 RefSeq gene 926285 926356 . + . ID=gene-LIO31_RS04690;Name=LIO31_RS04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS04690 NZ_CP085086.1 tRNAscan-SE tRNA 926285 926356 . + . ID=rna-LIO31_RS04690;Parent=gene-LIO31_RS04690;anticodon=(pos:926318..926320);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04690;product=tRNA-Arg NZ_CP085086.1 tRNAscan-SE exon 926285 926356 . + . ID=exon-LIO31_RS04690-1;Parent=rna-LIO31_RS04690;anticodon=(pos:926318..926320);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS04690;product=tRNA-Arg NZ_CP085086.1 RefSeq gene 926418 927446 . + . ID=gene-LIO31_RS04695;Name=LIO31_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04695 NZ_CP085086.1 Protein Homology CDS 926418 927446 . + 0 ID=cds-WP_011922304.1;Parent=gene-LIO31_RS04695;Dbxref=Genbank:WP_011922304.1;Name=WP_011922304.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016503195.1;locus_tag=LIO31_RS04695;product=beta-eliminating lyase-related protein;protein_id=WP_011922304.1;transl_table=11 NZ_CP085086.1 RefSeq gene 927465 927848 . - . ID=gene-LIO31_RS04700;Name=LIO31_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04700 NZ_CP085086.1 Protein Homology CDS 927465 927848 . - 0 ID=cds-WP_012775070.1;Parent=gene-LIO31_RS04700;Dbxref=Genbank:WP_012775070.1;Name=WP_012775070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735908.1;locus_tag=LIO31_RS04700;product=hypothetical protein;protein_id=WP_012775070.1;transl_table=11 NZ_CP085086.1 RefSeq gene 927909 928322 . - . ID=gene-LIO31_RS04705;Name=LIO31_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04705 NZ_CP085086.1 Protein Homology CDS 927909 928322 . - 0 ID=cds-WP_012775071.1;Parent=gene-LIO31_RS04705;Dbxref=Genbank:WP_012775071.1;Name=WP_012775071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638033.1;locus_tag=LIO31_RS04705;product=hypothetical protein;protein_id=WP_012775071.1;transl_table=11 NZ_CP085086.1 RefSeq gene 928435 929577 . + . ID=gene-LIO31_RS04710;Name=LIO31_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04710 NZ_CP085086.1 Protein Homology CDS 928435 929577 . + 0 ID=cds-WP_011922306.1;Parent=gene-LIO31_RS04710;Dbxref=Genbank:WP_011922306.1;Name=WP_011922306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543459.1;locus_tag=LIO31_RS04710;product=cysteine desulfurase;protein_id=WP_011922306.1;transl_table=11 NZ_CP085086.1 RefSeq gene 929579 930796 . + . ID=gene-LIO31_RS04715;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LIO31_RS04715 NZ_CP085086.1 Protein Homology CDS 929579 930796 . + 0 ID=cds-WP_011922307.1;Parent=gene-LIO31_RS04715;Dbxref=Genbank:WP_011922307.1;Name=WP_011922307.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922307.1;locus_tag=LIO31_RS04715;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_011922307.1;transl_table=11 NZ_CP085086.1 RefSeq gene 930918 932243 . + . ID=gene-LIO31_RS04720;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=LIO31_RS04720 NZ_CP085086.1 Protein Homology CDS 930918 932243 . + 0 ID=cds-WP_012775072.1;Parent=gene-LIO31_RS04720;Dbxref=Genbank:WP_012775072.1;Name=WP_012775072.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636384.1;locus_tag=LIO31_RS04720;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_012775072.1;transl_table=11 NZ_CP085086.1 cmsearch sequence_feature 932310 932398 . + . ID=id-NZ_CP085086.1:932310..932398;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085086.1 RefSeq gene 932434 932748 . + . ID=gene-LIO31_RS04725;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LIO31_RS04725 NZ_CP085086.1 Protein Homology CDS 932434 932748 . + 0 ID=cds-WP_002941330.1;Parent=gene-LIO31_RS04725;Dbxref=Genbank:WP_002941330.1;Name=WP_002941330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=LIO31_RS04725;product=50S ribosomal protein L21;protein_id=WP_002941330.1;transl_table=11 NZ_CP085086.1 RefSeq gene 932795 933088 . + . ID=gene-LIO31_RS04730;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LIO31_RS04730 NZ_CP085086.1 Protein Homology CDS 932795 933088 . + 0 ID=cds-WP_009909754.1;Parent=gene-LIO31_RS04730;Dbxref=Genbank:WP_009909754.1;Name=WP_009909754.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=LIO31_RS04730;product=50S ribosomal protein L27;protein_id=WP_009909754.1;transl_table=11 NZ_CP085086.1 RefSeq gene 933280 933438 . + . ID=gene-LIO31_RS04735;Name=LIO31_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04735 NZ_CP085086.1 Protein Homology CDS 933280 933438 . + 0 ID=cds-WP_012028070.1;Parent=gene-LIO31_RS04735;Dbxref=Genbank:WP_012028070.1;Name=WP_012028070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012792.2;locus_tag=LIO31_RS04735;product=GNAT family N-acetyltransferase;protein_id=WP_012028070.1;transl_table=11 NZ_CP085086.1 RefSeq gene 933521 934435 . + . ID=gene-LIO31_RS04740;Name=LIO31_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04740 NZ_CP085086.1 Protein Homology CDS 933521 934435 . + 0 ID=cds-WP_011922313.1;Parent=gene-LIO31_RS04740;Dbxref=Genbank:WP_011922313.1;Name=WP_011922313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735901.1;locus_tag=LIO31_RS04740;product=LysR family transcriptional regulator;protein_id=WP_011922313.1;transl_table=11 NZ_CP085086.1 RefSeq gene 934428 934892 . + . ID=gene-LIO31_RS04745;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LIO31_RS04745 NZ_CP085086.1 Protein Homology CDS 934428 934892 . + 0 ID=cds-WP_012775073.1;Parent=gene-LIO31_RS04745;Dbxref=Genbank:WP_012775073.1;Name=WP_012775073.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226252.1;locus_tag=LIO31_RS04745;product=signal peptidase II;protein_id=WP_012775073.1;transl_table=11 NZ_CP085086.1 RefSeq gene 934876 935769 . + . ID=gene-LIO31_RS04750;Name=LIO31_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04750 NZ_CP085086.1 Protein Homology CDS 934876 935769 . + 0 ID=cds-WP_002939451.1;Parent=gene-LIO31_RS04750;Dbxref=Genbank:WP_002939451.1;Name=WP_002939451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939451.1;locus_tag=LIO31_RS04750;product=RluA family pseudouridine synthase;protein_id=WP_002939451.1;transl_table=11 NZ_CP085086.1 RefSeq gene 935850 936188 . + . ID=gene-LIO31_RS04755;Name=LIO31_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04755 NZ_CP085086.1 Protein Homology CDS 935850 936188 . + 0 ID=cds-WP_012775074.1;Parent=gene-LIO31_RS04755;Dbxref=Genbank:WP_012775074.1;Name=WP_012775074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920966.1;locus_tag=LIO31_RS04755;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_012775074.1;transl_table=11 NZ_CP085086.1 RefSeq gene 936234 936881 . + . ID=gene-LIO31_RS04760;Name=LIO31_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04760 NZ_CP085086.1 Protein Homology CDS 936234 936881 . + 0 ID=cds-WP_023370456.1;Parent=gene-LIO31_RS04760;Dbxref=Genbank:WP_023370456.1;Name=WP_023370456.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939141.1;locus_tag=LIO31_RS04760;product=Pr6Pr family membrane protein;protein_id=WP_023370456.1;transl_table=11 NZ_CP085086.1 RefSeq gene 937080 937601 . + . ID=gene-LIO31_RS04765;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LIO31_RS04765 NZ_CP085086.1 Protein Homology CDS 937080 937601 . + 0 ID=cds-WP_011922318.1;Parent=gene-LIO31_RS04765;Dbxref=Genbank:WP_011922318.1;Name=WP_011922318.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939140.1;locus_tag=LIO31_RS04765;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_011922318.1;transl_table=11 NZ_CP085086.1 RefSeq gene 937657 938580 . + . ID=gene-LIO31_RS04770;Name=LIO31_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04770 NZ_CP085086.1 Protein Homology CDS 937657 938580 . + 0 ID=cds-WP_074389873.1;Parent=gene-LIO31_RS04770;Dbxref=Genbank:WP_074389873.1;Name=WP_074389873.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889464.1;locus_tag=LIO31_RS04770;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_074389873.1;transl_table=11 NZ_CP085086.1 RefSeq gene 938828 939907 . + . ID=gene-LIO31_RS04775;Name=LIO31_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04775 NZ_CP085086.1 Protein Homology CDS 938828 939907 . + 0 ID=cds-WP_002939138.1;Parent=gene-LIO31_RS04775;Dbxref=Genbank:WP_002939138.1;Name=WP_002939138.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940690.1;locus_tag=LIO31_RS04775;product=carbamoyl phosphate synthase small subunit;protein_id=WP_002939138.1;transl_table=11 NZ_CP085086.1 RefSeq gene 940267 943446 . + . ID=gene-LIO31_RS04780;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LIO31_RS04780 NZ_CP085086.1 Protein Homology CDS 940267 943446 . + 0 ID=cds-WP_074389909.1;Parent=gene-LIO31_RS04780;Dbxref=Genbank:WP_074389909.1;Name=WP_074389909.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803305.1;locus_tag=LIO31_RS04780;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_074389909.1;transl_table=11 NZ_CP085086.1 RefSeq gene 943510 944265 . + . ID=gene-LIO31_RS04785;Name=LIO31_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04785 NZ_CP085086.1 Protein Homology CDS 943510 944265 . + 0 ID=cds-WP_012775077.1;Parent=gene-LIO31_RS04785;Dbxref=Genbank:WP_012775077.1;Name=WP_012775077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735893.1;locus_tag=LIO31_RS04785;product=class I SAM-dependent methyltransferase;protein_id=WP_012775077.1;transl_table=11 NZ_CP085086.1 RefSeq gene 944262 944909 . + . ID=gene-LIO31_RS04790;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=LIO31_RS04790 NZ_CP085086.1 Protein Homology CDS 944262 944909 . + 0 ID=cds-WP_002940685.1;Parent=gene-LIO31_RS04790;Dbxref=Genbank:WP_002940685.1;Name=WP_002940685.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398107.1;locus_tag=LIO31_RS04790;product=pyroglutamyl-peptidase I;protein_id=WP_002940685.1;transl_table=11 NZ_CP085086.1 RefSeq gene 944921 945217 . + . ID=gene-LIO31_RS04795;Name=LIO31_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04795 NZ_CP085086.1 Protein Homology CDS 944921 945217 . + 0 ID=cds-WP_012775078.1;Parent=gene-LIO31_RS04795;Dbxref=Genbank:WP_012775078.1;Name=WP_012775078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775078.1;locus_tag=LIO31_RS04795;product=DUF4298 domain-containing protein;protein_id=WP_012775078.1;transl_table=11 NZ_CP085086.1 RefSeq gene 945341 945613 . + . ID=gene-LIO31_RS04800;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LIO31_RS04800 NZ_CP085086.1 Protein Homology CDS 945341 945613 . + 0 ID=cds-WP_002940682.1;Parent=gene-LIO31_RS04800;Dbxref=Genbank:WP_002940682.1;Name=WP_002940682.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=LIO31_RS04800;product=30S ribosomal protein S16;protein_id=WP_002940682.1;transl_table=11 NZ_CP085086.1 RefSeq gene 945635 945877 . + . ID=gene-LIO31_RS04805;Name=LIO31_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04805 NZ_CP085086.1 Protein Homology CDS 945635 945877 . + 0 ID=cds-WP_012028079.1;Parent=gene-LIO31_RS04805;Dbxref=Genbank:WP_012028079.1;Name=WP_012028079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379626.1;locus_tag=LIO31_RS04805;product=KH domain-containing protein;protein_id=WP_012028079.1;transl_table=11 NZ_CP085086.1 RefSeq gene 945953 947689 . + . ID=gene-LIO31_RS04810;Name=LIO31_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04810 NZ_CP085086.1 Protein Homology CDS 945953 947689 . + 0 ID=cds-WP_074389411.1;Parent=gene-LIO31_RS04810;Dbxref=Genbank:WP_074389411.1;Name=WP_074389411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286381.1;locus_tag=LIO31_RS04810;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389411.1;transl_table=11 NZ_CP085086.1 RefSeq gene 947698 949467 . + . ID=gene-LIO31_RS04815;Name=LIO31_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04815 NZ_CP085086.1 Protein Homology CDS 947698 949467 . + 0 ID=cds-WP_074389412.1;Parent=gene-LIO31_RS04815;Dbxref=Genbank:WP_074389412.1;Name=WP_074389412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646883.1;locus_tag=LIO31_RS04815;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389412.1;transl_table=11 NZ_CP085086.1 RefSeq gene 949524 950447 . - . ID=gene-LIO31_RS04820;Name=LIO31_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04820 NZ_CP085086.1 Protein Homology CDS 949524 950447 . - 0 ID=cds-WP_024383788.1;Parent=gene-LIO31_RS04820;Dbxref=Genbank:WP_024383788.1;Name=WP_024383788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735889.1;locus_tag=LIO31_RS04820;product=polysaccharide deacetylase family protein;protein_id=WP_024383788.1;transl_table=11 NZ_CP085086.1 RefSeq gene 950552 951838 . + . ID=gene-LIO31_RS04825;Name=LIO31_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04825 NZ_CP085086.1 Protein Homology CDS 950552 951838 . + 0 ID=cds-WP_074389874.1;Parent=gene-LIO31_RS04825;Dbxref=Genbank:WP_074389874.1;Name=WP_074389874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019782768.1;locus_tag=LIO31_RS04825;product=homoserine dehydrogenase;protein_id=WP_074389874.1;transl_table=11 NZ_CP085086.1 RefSeq gene 951842 952702 . + . ID=gene-LIO31_RS04830;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LIO31_RS04830 NZ_CP085086.1 Protein Homology CDS 951842 952702 . + 0 ID=cds-WP_011922331.1;Parent=gene-LIO31_RS04830;Dbxref=Genbank:WP_011922331.1;Name=WP_011922331.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922331.1;locus_tag=LIO31_RS04830;product=homoserine kinase;protein_id=WP_011922331.1;transl_table=11 NZ_CP085086.1 RefSeq gene 952933 953841 . + . ID=gene-LIO31_RS04835;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LIO31_RS04835 NZ_CP085086.1 Protein Homology CDS 952933 953841 . + 0 ID=cds-WP_011922332.1;Parent=gene-LIO31_RS04835;Dbxref=Genbank:WP_011922332.1;Name=WP_011922332.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922332.1;locus_tag=LIO31_RS04835;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_011922332.1;transl_table=11 NZ_CP085086.1 RefSeq gene 953880 955034 . + . ID=gene-LIO31_RS04840;Name=LIO31_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04840 NZ_CP085086.1 Protein Homology CDS 953880 955034 . + 0 ID=cds-WP_002938664.1;Parent=gene-LIO31_RS04840;Dbxref=Genbank:WP_002938664.1;Name=WP_002938664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940673.1;locus_tag=LIO31_RS04840;product=ABC transporter ATP-binding protein;protein_id=WP_002938664.1;transl_table=11 NZ_CP085086.1 RefSeq gene 955018 955818 . + . ID=gene-LIO31_RS04845;Name=LIO31_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04845 NZ_CP085086.1 Protein Homology CDS 955018 955818 . + 0 ID=cds-WP_226960939.1;Parent=gene-LIO31_RS04845;Dbxref=Genbank:WP_226960939.1;Name=WP_226960939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938659.1;locus_tag=LIO31_RS04845;product=ABC transporter permease subunit;protein_id=WP_226960939.1;transl_table=11 NZ_CP085086.1 RefSeq gene 955818 956588 . + . ID=gene-LIO31_RS04850;Name=LIO31_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04850 NZ_CP085086.1 Protein Homology CDS 955818 956588 . + 0 ID=cds-WP_002938656.1;Parent=gene-LIO31_RS04850;Dbxref=Genbank:WP_002938656.1;Name=WP_002938656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646880.1;locus_tag=LIO31_RS04850;product=ABC transporter permease;protein_id=WP_002938656.1;transl_table=11 NZ_CP085086.1 RefSeq gene 956588 957658 . + . ID=gene-LIO31_RS04855;Name=LIO31_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04855 NZ_CP085086.1 Protein Homology CDS 956588 957658 . + 0 ID=cds-WP_011922335.1;Parent=gene-LIO31_RS04855;Dbxref=Genbank:WP_011922335.1;Name=WP_011922335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735885.1;locus_tag=LIO31_RS04855;product=ABC transporter substrate-binding protein;protein_id=WP_011922335.1;transl_table=11 NZ_CP085086.1 RefSeq gene 957772 959310 . + . ID=gene-LIO31_RS04860;Name=LIO31_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04860 NZ_CP085086.1 Protein Homology CDS 957772 959310 . + 0 ID=cds-WP_024405725.1;Parent=gene-LIO31_RS04860;Dbxref=Genbank:WP_024405725.1;Name=WP_024405725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621447.1;locus_tag=LIO31_RS04860;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=WP_024405725.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 959359 959680 . - . ID=gene-LIO31_RS04865;Name=LIO31_RS04865;end_range=959680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04865;partial=true;pseudo=true;start_range=.,959359 NZ_CP085086.1 Protein Homology CDS 959359 959680 . - 0 ID=cds-LIO31_RS04865;Parent=gene-LIO31_RS04865;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=959680,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935801.1;locus_tag=LIO31_RS04865;partial=true;product=transposase;pseudo=true;start_range=.,959359;transl_table=11 NZ_CP085086.1 RefSeq gene 960132 960701 . + . ID=gene-LIO31_RS04870;Name=LIO31_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04870 NZ_CP085086.1 Protein Homology CDS 960132 960701 . + 0 ID=cds-WP_074389875.1;Parent=gene-LIO31_RS04870;Dbxref=Genbank:WP_074389875.1;Name=WP_074389875.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=LIO31_RS04870;product=YSIRK-type signal peptide-containing protein;protein_id=WP_074389875.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 960841 961944 . + . ID=gene-LIO31_RS04875;Name=LIO31_RS04875;end_range=961944,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS04875;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 960841 961944 . + 0 ID=cds-LIO31_RS04875;Parent=gene-LIO31_RS04875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0008236;end_range=961944,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.2;locus_tag=LIO31_RS04875;partial=true;product=S8 family serine peptidase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 961936 964878 . + . ID=gene-LIO31_RS04880;Name=LIO31_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04880 NZ_CP085086.1 Protein Homology CDS 961936 964878 . + 0 ID=cds-WP_253180730.1;Parent=gene-LIO31_RS04880;Dbxref=Genbank:WP_253180730.1;Name=WP_253180730.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF018035.2;locus_tag=LIO31_RS04880;product=Fn3-like domain-containing protein;protein_id=WP_253180730.1;transl_table=11 NZ_CP085086.1 RefSeq gene 965060 965911 . - . ID=gene-LIO31_RS04885;Name=LIO31_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04885 NZ_CP085086.1 Protein Homology CDS 965060 965911 . - 0 ID=cds-WP_024383543.1;Parent=gene-LIO31_RS04885;Dbxref=Genbank:WP_024383543.1;Name=WP_024383543.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941443.1;locus_tag=LIO31_RS04885;product=NAD(P)H-hydrate dehydratase;protein_id=WP_024383543.1;transl_table=11 NZ_CP085086.1 RefSeq gene 966010 966633 . + . ID=gene-LIO31_RS04890;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LIO31_RS04890 NZ_CP085086.1 Protein Homology CDS 966010 966633 . + 0 ID=cds-WP_012775083.1;Parent=gene-LIO31_RS04890;Dbxref=Genbank:WP_012775083.1;Name=WP_012775083.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378713.1;locus_tag=LIO31_RS04890;product=endonuclease III;protein_id=WP_012775083.1;transl_table=11 NZ_CP085086.1 RefSeq gene 966919 967902 . + . ID=gene-LIO31_RS04895;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=LIO31_RS04895 NZ_CP085086.1 Protein Homology CDS 966919 967902 . + 0 ID=cds-WP_024405722.1;Parent=gene-LIO31_RS04895;Dbxref=Genbank:WP_024405722.1;Name=WP_024405722.1;Ontology_term=GO:0015950,GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide interconversion|0015950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017769630.1;locus_tag=LIO31_RS04895;product=GMP reductase;protein_id=WP_024405722.1;transl_table=11 NZ_CP085086.1 RefSeq gene 967972 969321 . + . ID=gene-LIO31_RS04900;Name=LIO31_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04900 NZ_CP085086.1 Protein Homology CDS 967972 969321 . + 0 ID=cds-WP_074389413.1;Parent=gene-LIO31_RS04900;Dbxref=Genbank:WP_074389413.1;Name=WP_074389413.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730355.1;locus_tag=LIO31_RS04900;product=MATE family efflux transporter;protein_id=WP_074389413.1;transl_table=11 NZ_CP085086.1 RefSeq gene 969419 969937 . + . ID=gene-LIO31_RS04905;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LIO31_RS04905 NZ_CP085086.1 Protein Homology CDS 969419 969937 . + 0 ID=cds-WP_015646874.1;Parent=gene-LIO31_RS04905;Dbxref=Genbank:WP_015646874.1;Name=WP_015646874.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465641.1;locus_tag=LIO31_RS04905;product=ribosome maturation factor RimM;protein_id=WP_015646874.1;transl_table=11 NZ_CP085086.1 RefSeq gene 969927 970652 . + . ID=gene-LIO31_RS04910;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LIO31_RS04910 NZ_CP085086.1 Protein Homology CDS 969927 970652 . + 0 ID=cds-WP_044682382.1;Parent=gene-LIO31_RS04910;Dbxref=Genbank:WP_044682382.1;Name=WP_044682382.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941457.1;locus_tag=LIO31_RS04910;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_044682382.1;transl_table=11 NZ_CP085086.1 RefSeq gene 970683 971738 . + . ID=gene-LIO31_RS04915;Name=LIO31_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04915 NZ_CP085086.1 Protein Homology CDS 970683 971738 . + 0 ID=cds-WP_024403097.1;Parent=gene-LIO31_RS04915;Dbxref=Genbank:WP_024403097.1;Name=WP_024403097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646873.1;locus_tag=LIO31_RS04915;product=histidinol-phosphate aminotransferase family protein;protein_id=WP_024403097.1;transl_table=11 NZ_CP085086.1 RefSeq gene 971833 972582 . + . ID=gene-LIO31_RS04920;Name=LIO31_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04920 NZ_CP085086.1 Protein Homology CDS 971833 972582 . + 0 ID=cds-WP_014637965.1;Parent=gene-LIO31_RS04920;Dbxref=Genbank:WP_014637965.1;Name=WP_014637965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909780.1;locus_tag=LIO31_RS04920;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_014637965.1;transl_table=11 NZ_CP085086.1 RefSeq gene 972579 973490 . + . ID=gene-LIO31_RS04925;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=LIO31_RS04925 NZ_CP085086.1 Protein Homology CDS 972579 973490 . + 0 ID=cds-WP_024403096.1;Parent=gene-LIO31_RS04925;Dbxref=Genbank:WP_024403096.1;Name=WP_024403096.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019323947.1;locus_tag=LIO31_RS04925;product=1-phosphofructokinase;protein_id=WP_024403096.1;transl_table=11 NZ_CP085086.1 RefSeq gene 973487 975442 . + . ID=gene-LIO31_RS04930;Name=LIO31_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04930 NZ_CP085086.1 Protein Homology CDS 973487 975442 . + 0 ID=cds-WP_074389876.1;Parent=gene-LIO31_RS04930;Dbxref=Genbank:WP_074389876.1;Name=WP_074389876.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637963.1;locus_tag=LIO31_RS04930;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_074389876.1;transl_table=11 NZ_CP085086.1 RefSeq gene 975539 975913 . + . ID=gene-LIO31_RS04935;Name=LIO31_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04935 NZ_CP085086.1 Protein Homology CDS 975539 975913 . + 0 ID=cds-WP_002934959.1;Parent=gene-LIO31_RS04935;Dbxref=Genbank:WP_002934959.1;Name=WP_002934959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002305392.1;locus_tag=LIO31_RS04935;product=DUF1149 family protein;protein_id=WP_002934959.1;transl_table=11 NZ_CP085086.1 RefSeq gene 975915 976766 . + . ID=gene-LIO31_RS04940;Name=LIO31_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04940 NZ_CP085086.1 Protein Homology CDS 975915 976766 . + 0 ID=cds-WP_024405718.1;Parent=gene-LIO31_RS04940;Dbxref=Genbank:WP_024405718.1;Name=WP_024405718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943144.1;locus_tag=LIO31_RS04940;product=DegV family protein;protein_id=WP_024405718.1;transl_table=11 NZ_CP085086.1 RefSeq gene 976775 977542 . + . ID=gene-LIO31_RS04945;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LIO31_RS04945 NZ_CP085086.1 Protein Homology CDS 976775 977542 . + 0 ID=cds-WP_024381818.1;Parent=gene-LIO31_RS04945;Dbxref=Genbank:WP_024381818.1;Name=WP_024381818.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262893.1;locus_tag=LIO31_RS04945;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_024381818.1;transl_table=11 NZ_CP085086.1 RefSeq gene 977539 978750 . + . ID=gene-LIO31_RS04950;Name=LIO31_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04950 NZ_CP085086.1 Protein Homology CDS 977539 978750 . + 0 ID=cds-WP_024405717.1;Parent=gene-LIO31_RS04950;Dbxref=Genbank:WP_024405717.1;Name=WP_024405717.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646866.1;locus_tag=LIO31_RS04950;product=CCA tRNA nucleotidyltransferase;protein_id=WP_024405717.1;transl_table=11 NZ_CP085086.1 RefSeq gene 978743 980611 . + . ID=gene-LIO31_RS04955;Name=LIO31_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04955 NZ_CP085086.1 Protein Homology CDS 978743 980611 . + 0 ID=cds-WP_024405716.1;Parent=gene-LIO31_RS04955;Dbxref=Genbank:WP_024405716.1;Name=WP_024405716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836912.1;locus_tag=LIO31_RS04955;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_024405716.1;transl_table=11 NZ_CP085086.1 RefSeq gene 980612 980947 . + . ID=gene-LIO31_RS04960;Name=LIO31_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04960 NZ_CP085086.1 Protein Homology CDS 980612 980947 . + 0 ID=cds-WP_002934966.1;Parent=gene-LIO31_RS04960;Dbxref=Genbank:WP_002934966.1;Name=WP_002934966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934966.1;locus_tag=LIO31_RS04960;product=hypothetical protein;protein_id=WP_002934966.1;transl_table=11 NZ_CP085086.1 RefSeq gene 981043 982002 . + . ID=gene-LIO31_RS04965;Name=LIO31_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04965 NZ_CP085086.1 Protein Homology CDS 981043 982002 . + 0 ID=cds-WP_023370402.1;Parent=gene-LIO31_RS04965;Dbxref=Genbank:WP_023370402.1;Name=WP_023370402.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078546.1;locus_tag=LIO31_RS04965;product=ROK family glucokinase;protein_id=WP_023370402.1;transl_table=11 NZ_CP085086.1 RefSeq gene 982129 982407 . + . ID=gene-LIO31_RS04970;Name=LIO31_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04970 NZ_CP085086.1 Protein Homology CDS 982129 982407 . + 0 ID=cds-WP_012775087.1;Parent=gene-LIO31_RS04970;Dbxref=Genbank:WP_012775087.1;Name=WP_012775087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775087.1;locus_tag=LIO31_RS04970;product=hypothetical protein;protein_id=WP_012775087.1;transl_table=11 NZ_CP085086.1 RefSeq gene 982419 982721 . + . ID=gene-LIO31_RS04975;Name=LIO31_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04975 NZ_CP085086.1 Protein Homology CDS 982419 982721 . + 0 ID=cds-WP_024383529.1;Parent=gene-LIO31_RS04975;Dbxref=Genbank:WP_024383529.1;Name=WP_024383529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638912.1;locus_tag=LIO31_RS04975;product=hypothetical protein;protein_id=WP_024383529.1;transl_table=11 NZ_CP085086.1 RefSeq gene 982774 983613 . + . ID=gene-LIO31_RS04980;Name=LIO31_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04980 NZ_CP085086.1 Protein Homology CDS 982774 983613 . + 0 ID=cds-WP_014637954.1;Parent=gene-LIO31_RS04980;Dbxref=Genbank:WP_014637954.1;Name=WP_014637954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632084.1;locus_tag=LIO31_RS04980;product=thymidylate synthase;protein_id=WP_014637954.1;transl_table=11 NZ_CP085086.1 RefSeq gene 983951 984463 . + . ID=gene-LIO31_RS04985;Name=LIO31_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS04985 NZ_CP085086.1 Protein Homology CDS 983951 984463 . + 0 ID=cds-WP_024405715.1;Parent=gene-LIO31_RS04985;Dbxref=Genbank:WP_024405715.1;Name=WP_024405715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646861.1;locus_tag=LIO31_RS04985;product=dihydrofolate reductase;protein_id=WP_024405715.1;transl_table=11 NZ_CP085086.1 RefSeq gene 984661 985887 . + . ID=gene-LIO31_RS04990;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LIO31_RS04990 NZ_CP085086.1 Protein Homology CDS 984661 985887 . + 0 ID=cds-WP_002934974.1;Parent=gene-LIO31_RS04990;Dbxref=Genbank:WP_002934974.1;Name=WP_002934974.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943186.1;locus_tag=LIO31_RS04990;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002934974.1;transl_table=11 NZ_CP085086.1 RefSeq gene 985942 986529 . + . ID=gene-LIO31_RS04995;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LIO31_RS04995 NZ_CP085086.1 Protein Homology CDS 985942 986529 . + 0 ID=cds-WP_014638915.1;Parent=gene-LIO31_RS04995;Dbxref=Genbank:WP_014638915.1;Name=WP_014638915.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915299.1;locus_tag=LIO31_RS04995;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_014638915.1;transl_table=11 NZ_CP085086.1 RefSeq gene 986552 986965 . + . ID=gene-LIO31_RS05000;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LIO31_RS05000 NZ_CP085086.1 Protein Homology CDS 986552 986965 . + 0 ID=cds-WP_024405714.1;Parent=gene-LIO31_RS05000;Dbxref=Genbank:WP_024405714.1;Name=WP_024405714.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934976.1;locus_tag=LIO31_RS05000;product=nucleoside-diphosphate kinase;protein_id=WP_024405714.1;transl_table=11 NZ_CP085086.1 RefSeq gene 987061 988893 . + . ID=gene-LIO31_RS05005;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LIO31_RS05005 NZ_CP085086.1 Protein Homology CDS 987061 988893 . + 0 ID=cds-WP_024405713.1;Parent=gene-LIO31_RS05005;Dbxref=Genbank:WP_024405713.1;Name=WP_024405713.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017645216.1;locus_tag=LIO31_RS05005;product=translation elongation factor 4;protein_id=WP_024405713.1;transl_table=11 NZ_CP085086.1 RefSeq gene 988947 989234 . + . ID=gene-LIO31_RS05010;Name=LIO31_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05010 NZ_CP085086.1 GeneMarkS-2+ CDS 988947 989234 . + 0 ID=cds-WP_024405712.1;Parent=gene-LIO31_RS05010;Dbxref=Genbank:WP_024405712.1;Name=WP_024405712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS05010;product=hypothetical protein;protein_id=WP_024405712.1;transl_table=11 NZ_CP085086.1 RefSeq gene 989651 989833 . - . ID=gene-LIO31_RS05015;Name=LIO31_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05015 NZ_CP085086.1 Protein Homology CDS 989651 989833 . - 0 ID=cds-WP_002934978.1;Parent=gene-LIO31_RS05015;Dbxref=Genbank:WP_002934978.1;Name=WP_002934978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117229.1;locus_tag=LIO31_RS05015;product=4-oxalocrotonate tautomerase;protein_id=WP_002934978.1;transl_table=11 NZ_CP085086.1 RefSeq gene 989956 990180 . + . ID=gene-LIO31_RS05020;Name=LIO31_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05020 NZ_CP085086.1 Protein Homology CDS 989956 990180 . + 0 ID=cds-WP_024405711.1;Parent=gene-LIO31_RS05020;Dbxref=Genbank:WP_024405711.1;Name=WP_024405711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934981.1;locus_tag=LIO31_RS05020;product=hypothetical protein;protein_id=WP_024405711.1;transl_table=11 NZ_CP085086.1 RefSeq gene 990279 990860 . + . ID=gene-LIO31_RS05025;Name=LIO31_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05025 NZ_CP085086.1 Protein Homology CDS 990279 990860 . + 0 ID=cds-WP_002934983.1;Parent=gene-LIO31_RS05025;Dbxref=Genbank:WP_002934983.1;Name=WP_002934983.1;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028098.1;locus_tag=LIO31_RS05025;product=thymidine kinase;protein_id=WP_002934983.1;transl_table=11 NZ_CP085086.1 RefSeq gene 991139 992218 . + . ID=gene-LIO31_RS05030;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LIO31_RS05030 NZ_CP085086.1 Protein Homology CDS 991139 992218 . + 0 ID=cds-WP_024392196.1;Parent=gene-LIO31_RS05030;Dbxref=Genbank:WP_024392196.1;Name=WP_024392196.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028822.1;locus_tag=LIO31_RS05030;product=peptide chain release factor 1;protein_id=WP_024392196.1;transl_table=11 NZ_CP085086.1 RefSeq gene 992218 993051 . + . ID=gene-LIO31_RS05035;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LIO31_RS05035 NZ_CP085086.1 Protein Homology CDS 992218 993051 . + 0 ID=cds-WP_024405710.1;Parent=gene-LIO31_RS05035;Dbxref=Genbank:WP_024405710.1;Name=WP_024405710.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934985.1;locus_tag=LIO31_RS05035;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_024405710.1;transl_table=11 NZ_CP085086.1 RefSeq gene 993038 993646 . + . ID=gene-LIO31_RS05040;Name=LIO31_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05040 NZ_CP085086.1 Protein Homology CDS 993038 993646 . + 0 ID=cds-WP_009909811.1;Parent=gene-LIO31_RS05040;Dbxref=Genbank:WP_009909811.1;Name=WP_009909811.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922372.1;locus_tag=LIO31_RS05040;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_009909811.1;transl_table=11 NZ_CP085086.1 RefSeq gene 993643 994074 . + . ID=gene-LIO31_RS05045;Name=LIO31_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05045 NZ_CP085086.1 Protein Homology CDS 993643 994074 . + 0 ID=cds-WP_074389878.1;Parent=gene-LIO31_RS05045;Dbxref=Genbank:WP_074389878.1;Name=WP_074389878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735865.1;locus_tag=LIO31_RS05045;product=GNAT family N-acetyltransferase;protein_id=WP_074389878.1;transl_table=11 NZ_CP085086.1 RefSeq gene 994098 995357 . + . ID=gene-LIO31_RS05050;Name=LIO31_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05050 NZ_CP085086.1 Protein Homology CDS 994098 995357 . + 0 ID=cds-WP_002934988.1;Parent=gene-LIO31_RS05050;Dbxref=Genbank:WP_002934988.1;Name=WP_002934988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646853.1;locus_tag=LIO31_RS05050;product=serine hydroxymethyltransferase;protein_id=WP_002934988.1;transl_table=11 NZ_CP085086.1 RefSeq gene 995357 996331 . + . ID=gene-LIO31_RS05055;Name=LIO31_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05055 NZ_CP085086.1 Protein Homology CDS 995357 996331 . + 0 ID=cds-WP_074389879.1;Parent=gene-LIO31_RS05055;Dbxref=Genbank:WP_074389879.1;Name=WP_074389879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153495.1;locus_tag=LIO31_RS05055;product=nucleoid-associated protein;protein_id=WP_074389879.1;transl_table=11 NZ_CP085086.1 RefSeq gene 996332 996931 . + . ID=gene-LIO31_RS05060;Name=LIO31_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05060 NZ_CP085086.1 Protein Homology CDS 996332 996931 . + 0 ID=cds-WP_002934990.1;Parent=gene-LIO31_RS05060;Dbxref=Genbank:WP_002934990.1;Name=WP_002934990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028102.1;locus_tag=LIO31_RS05060;product=lysozyme family protein;protein_id=WP_002934990.1;transl_table=11 NZ_CP085086.1 RefSeq gene 997032 997790 . + . ID=gene-LIO31_RS05065;Name=LIO31_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05065 NZ_CP085086.1 Protein Homology CDS 997032 997790 . + 0 ID=cds-WP_002943202.1;Parent=gene-LIO31_RS05065;Dbxref=Genbank:WP_002943202.1;Name=WP_002943202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002934991.1;locus_tag=LIO31_RS05065;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002943202.1;transl_table=11 NZ_CP085086.1 RefSeq gene 997807 998553 . + . ID=gene-LIO31_RS05070;Name=LIO31_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05070 NZ_CP085086.1 Protein Homology CDS 997807 998553 . + 0 ID=cds-WP_024405707.1;Parent=gene-LIO31_RS05070;Dbxref=Genbank:WP_024405707.1;Name=WP_024405707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775625.1;locus_tag=LIO31_RS05070;product=DUF6287 domain-containing protein;protein_id=WP_024405707.1;transl_table=11 NZ_CP085086.1 RefSeq gene 998575 998922 . + . ID=gene-LIO31_RS05075;Name=LIO31_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05075 NZ_CP085086.1 Protein Homology CDS 998575 998922 . + 0 ID=cds-WP_024378649.1;Parent=gene-LIO31_RS05075;Dbxref=Genbank:WP_024378649.1;Name=WP_024378649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646849.1;locus_tag=LIO31_RS05075;product=HIRAN domain-containing protein;protein_id=WP_024378649.1;transl_table=11 NZ_CP085086.1 RefSeq gene 998951 999808 . - . ID=gene-LIO31_RS05080;Name=LIO31_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05080 NZ_CP085086.1 Protein Homology CDS 998951 999808 . - 0 ID=cds-WP_029752299.1;Parent=gene-LIO31_RS05080;Dbxref=Genbank:WP_029752299.1;Name=WP_029752299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775092.1;locus_tag=LIO31_RS05080;product=hypothetical protein;protein_id=WP_029752299.1;transl_table=11 NZ_CP085086.1 RefSeq gene 999926 1000714 . - . ID=gene-LIO31_RS05085;Name=LIO31_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05085 NZ_CP085086.1 Protein Homology CDS 999926 1000714 . - 0 ID=cds-WP_024405705.1;Parent=gene-LIO31_RS05085;Dbxref=Genbank:WP_024405705.1;Name=WP_024405705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943206.1;locus_tag=LIO31_RS05085;product=hypothetical protein;protein_id=WP_024405705.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1000909 1002606 . + . ID=gene-LIO31_RS05090;Name=LIO31_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05090 NZ_CP085086.1 Protein Homology CDS 1000909 1002606 . + 0 ID=cds-WP_024405704.1;Parent=gene-LIO31_RS05090;Dbxref=Genbank:WP_024405704.1;Name=WP_024405704.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735858.1;locus_tag=LIO31_RS05090;product=AAA family ATPase;protein_id=WP_024405704.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1002603 1003652 . + . ID=gene-LIO31_RS05095;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=LIO31_RS05095 NZ_CP085086.1 Protein Homology CDS 1002603 1003652 . + 0 ID=cds-WP_024405703.1;Parent=gene-LIO31_RS05095;Dbxref=Genbank:WP_024405703.1;Name=WP_024405703.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922381.1;locus_tag=LIO31_RS05095;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WP_024405703.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1003853 1005403 . - . ID=gene-LIO31_RS05100;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LIO31_RS05100 NZ_CP085086.1 Protein Homology CDS 1003853 1005403 . - 0 ID=cds-WP_002934999.1;Parent=gene-LIO31_RS05100;Dbxref=Genbank:WP_002934999.1;Name=WP_002934999.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009880616.1;locus_tag=LIO31_RS05100;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_002934999.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1005679 1006377 . + . ID=gene-LIO31_RS05105;Name=LIO31_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05105 NZ_CP085086.1 Protein Homology CDS 1005679 1006377 . + 0 ID=cds-WP_002943214.1;Parent=gene-LIO31_RS05105;Dbxref=Genbank:WP_002943214.1;Name=WP_002943214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003076949.1;locus_tag=LIO31_RS05105;product=GntR family transcriptional regulator;protein_id=WP_002943214.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1006481 1006813 . + . ID=gene-LIO31_RS05110;Name=LIO31_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05110 NZ_CP085086.1 Protein Homology CDS 1006481 1006813 . + 0 ID=cds-WP_002935001.1;Parent=gene-LIO31_RS05110;Dbxref=Genbank:WP_002935001.1;Name=WP_002935001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637934.1;locus_tag=LIO31_RS05110;product=putative DNA-binding protein;protein_id=WP_002935001.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1006826 1008400 . + . ID=gene-LIO31_RS05115;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LIO31_RS05115 NZ_CP085086.1 Protein Homology CDS 1006826 1008400 . + 0 ID=cds-WP_024405702.1;Parent=gene-LIO31_RS05115;Dbxref=Genbank:WP_024405702.1;Name=WP_024405702.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863601.1;locus_tag=LIO31_RS05115;product=signal recognition particle protein;protein_id=WP_024405702.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1008594 1009262 . + . ID=gene-LIO31_RS05120;Name=LIO31_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05120 NZ_CP085086.1 Protein Homology CDS 1008594 1009262 . + 0 ID=cds-WP_074389422.1;Parent=gene-LIO31_RS05120;Dbxref=Genbank:WP_074389422.1;Name=WP_074389422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646841.1;locus_tag=LIO31_RS05120;product=SatD family protein;protein_id=WP_074389422.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1009266 1010006 . + . ID=gene-LIO31_RS05125;Name=LIO31_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05125 NZ_CP085086.1 Protein Homology CDS 1009266 1010006 . + 0 ID=cds-WP_074389423.1;Parent=gene-LIO31_RS05125;Dbxref=Genbank:WP_074389423.1;Name=WP_074389423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909823.1;locus_tag=LIO31_RS05125;product=DUF3307 domain-containing protein;protein_id=WP_074389423.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1010073 1010366 . + . ID=gene-LIO31_RS05130;Name=LIO31_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05130 NZ_CP085086.1 GeneMarkS-2+ CDS 1010073 1010366 . + 0 ID=cds-WP_226319149.1;Parent=gene-LIO31_RS05130;Dbxref=Genbank:WP_226319149.1;Name=WP_226319149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS05130;product=hypothetical protein;protein_id=WP_226319149.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1010363 1010599 . + . ID=gene-LIO31_RS05135;Name=LIO31_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05135 NZ_CP085086.1 GeneMarkS-2+ CDS 1010363 1010599 . + 0 ID=cds-WP_226319150.1;Parent=gene-LIO31_RS05135;Dbxref=Genbank:WP_226319150.1;Name=WP_226319150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS05135;product=hypothetical protein;protein_id=WP_226319150.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1010766 1011836 . + . ID=gene-LIO31_RS05140;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=protein_coding;locus_tag=LIO31_RS05140 NZ_CP085086.1 Protein Homology CDS 1010766 1011836 . + 0 ID=cds-WP_024405698.1;Parent=gene-LIO31_RS05140;Dbxref=Genbank:WP_024405698.1;Name=WP_024405698.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012658412.1;locus_tag=LIO31_RS05140;product=tyrosine recombinase XerS;protein_id=WP_024405698.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1011906 1013414 . - . ID=gene-LIO31_RS05145;Name=LIO31_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05145 NZ_CP085086.1 Protein Homology CDS 1011906 1013414 . - 0 ID=cds-WP_024405697.1;Parent=gene-LIO31_RS05145;Dbxref=Genbank:WP_024405697.1;Name=WP_024405697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646836.1;locus_tag=LIO31_RS05145;product=phosphoglucomutase;protein_id=WP_024405697.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1013489 1014430 . - . ID=gene-LIO31_RS05150;Name=LIO31_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05150 NZ_CP085086.1 Protein Homology CDS 1013489 1014430 . - 0 ID=cds-WP_024405696.1;Parent=gene-LIO31_RS05150;Dbxref=Genbank:WP_024405696.1;Name=WP_024405696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775102.1;locus_tag=LIO31_RS05150;product=sensor histidine kinase;protein_id=WP_024405696.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1014427 1015092 . - . ID=gene-LIO31_RS05155;Name=LIO31_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05155 NZ_CP085086.1 Protein Homology CDS 1014427 1015092 . - 0 ID=cds-WP_024405695.1;Parent=gene-LIO31_RS05155;Dbxref=Genbank:WP_024405695.1;Name=WP_024405695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961975.1;locus_tag=LIO31_RS05155;product=response regulator transcription factor;protein_id=WP_024405695.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1015134 1015400 . - . ID=gene-LIO31_RS05160;Name=LIO31_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05160 NZ_CP085086.1 Protein Homology CDS 1015134 1015400 . - 0 ID=cds-WP_024405694.1;Parent=gene-LIO31_RS05160;Dbxref=Genbank:WP_024405694.1;Name=WP_024405694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637925.1;locus_tag=LIO31_RS05160;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_024405694.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1015384 1015635 . - . ID=gene-LIO31_RS05165;Name=LIO31_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05165 NZ_CP085086.1 Protein Homology CDS 1015384 1015635 . - 0 ID=cds-WP_012775104.1;Parent=gene-LIO31_RS05165;Dbxref=Genbank:WP_012775104.1;Name=WP_012775104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943256.1;locus_tag=LIO31_RS05165;product=DUF6290 family protein;protein_id=WP_012775104.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1015727 1017697 . - . ID=gene-LIO31_RS05170;Name=LIO31_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05170 NZ_CP085086.1 Protein Homology CDS 1015727 1017697 . - 0 ID=cds-WP_074389880.1;Parent=gene-LIO31_RS05170;Dbxref=Genbank:WP_074389880.1;Name=WP_074389880.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935016.1;locus_tag=LIO31_RS05170;product=FtsX-like permease family protein;protein_id=WP_074389880.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1017698 1018450 . - . ID=gene-LIO31_RS05175;Name=LIO31_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05175 NZ_CP085086.1 Protein Homology CDS 1017698 1018450 . - 0 ID=cds-WP_011922409.1;Parent=gene-LIO31_RS05175;Dbxref=Genbank:WP_011922409.1;Name=WP_011922409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017650232.1;locus_tag=LIO31_RS05175;product=ABC transporter ATP-binding protein;protein_id=WP_011922409.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1018471 1018848 . - . ID=gene-LIO31_RS05180;Name=LIO31_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05180 NZ_CP085086.1 Protein Homology CDS 1018471 1018848 . - 0 ID=cds-WP_011922413.1;Parent=gene-LIO31_RS05180;Dbxref=Genbank:WP_011922413.1;Name=WP_011922413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922413.1;locus_tag=LIO31_RS05180;product=NisI/SpaI family lantibiotic immunity lipoprotein;protein_id=WP_011922413.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1018861 1019001 . - . ID=gene-LIO31_RS05185;Name=LIO31_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05185 NZ_CP085086.1 Protein Homology CDS 1018861 1019001 . - 0 ID=cds-WP_012775106.1;Parent=gene-LIO31_RS05185;Dbxref=Genbank:WP_012775106.1;Name=WP_012775106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775106.1;locus_tag=LIO31_RS05185;product=hypothetical protein;protein_id=WP_012775106.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1019141 1020307 . - . ID=gene-LIO31_RS05190;Name=LIO31_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05190 NZ_CP085086.1 Protein Homology CDS 1019141 1020307 . - 0 ID=cds-WP_011922414.1;Parent=gene-LIO31_RS05190;Dbxref=Genbank:WP_011922414.1;Name=WP_011922414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922414.1;locus_tag=LIO31_RS05190;product=carbamoyl phosphate synthase large subunit;protein_id=WP_011922414.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1020325 1021071 . - . ID=gene-LIO31_RS05195;Name=LIO31_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05195 NZ_CP085086.1 Protein Homology CDS 1020325 1021071 . - 0 ID=cds-WP_014637916.1;Parent=gene-LIO31_RS05195;Dbxref=Genbank:WP_014637916.1;Name=WP_014637916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909732.1;locus_tag=LIO31_RS05195;product=alpha/beta hydrolase-fold protein;protein_id=WP_014637916.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1021102 1021929 . - . ID=gene-LIO31_RS05200;Name=LIO31_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05200 NZ_CP085086.1 Protein Homology CDS 1021102 1021929 . - 0 ID=cds-WP_024405692.1;Parent=gene-LIO31_RS05200;Dbxref=Genbank:WP_024405692.1;Name=WP_024405692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935033.1;locus_tag=LIO31_RS05200;product=alpha/beta hydrolase;protein_id=WP_024405692.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1022043 1023047 . - . ID=gene-LIO31_RS05205;Name=LIO31_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05205 NZ_CP085086.1 Protein Homology CDS 1022043 1023047 . - 0 ID=cds-WP_012775107.1;Parent=gene-LIO31_RS05205;Dbxref=Genbank:WP_012775107.1;Name=WP_012775107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775107.1;locus_tag=LIO31_RS05205;product=winged helix DNA-binding domain-containing protein;protein_id=WP_012775107.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1023112 1023948 . - . ID=gene-LIO31_RS05210;Name=LIO31_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05210 NZ_CP085086.1 Protein Homology CDS 1023112 1023948 . - 0 ID=cds-WP_014636394.1;Parent=gene-LIO31_RS05210;Dbxref=Genbank:WP_014636394.1;Name=WP_014636394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636394.1;locus_tag=LIO31_RS05210;product=AraC family transcriptional regulator;protein_id=WP_014636394.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1024025 1025359 . - . ID=gene-LIO31_RS05215;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=LIO31_RS05215 NZ_CP085086.1 Protein Homology CDS 1024025 1025359 . - 0 ID=cds-WP_074389424.1;Parent=gene-LIO31_RS05215;Dbxref=Genbank:WP_074389424.1;Name=WP_074389424.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922419.1;locus_tag=LIO31_RS05215;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_074389424.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1025555 1026304 . - . ID=gene-LIO31_RS05220;Name=LIO31_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05220 NZ_CP085086.1 Protein Homology CDS 1025555 1026304 . - 0 ID=cds-WP_011922420.1;Parent=gene-LIO31_RS05220;Dbxref=Genbank:WP_011922420.1;Name=WP_011922420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646823.1;locus_tag=LIO31_RS05220;product=HAD family hydrolase;protein_id=WP_011922420.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1026429 1026794 . - . ID=gene-LIO31_RS05225;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LIO31_RS05225 NZ_CP085086.1 Protein Homology CDS 1026429 1026794 . - 0 ID=cds-WP_002936483.1;Parent=gene-LIO31_RS05225;Dbxref=Genbank:WP_002936483.1;Name=WP_002936483.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=LIO31_RS05225;product=50S ribosomal protein L7/L12;protein_id=WP_002936483.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1026860 1027354 . - . ID=gene-LIO31_RS05230;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LIO31_RS05230 NZ_CP085086.1 Protein Homology CDS 1026860 1027354 . - 0 ID=cds-WP_002936486.1;Parent=gene-LIO31_RS05230;Dbxref=Genbank:WP_002936486.1;Name=WP_002936486.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=LIO31_RS05230;product=50S ribosomal protein L10;protein_id=WP_002936486.1;transl_table=11 NZ_CP085086.1 cmsearch sequence_feature 1027381 1027515 . - . ID=id-NZ_CP085086.1:1027381..1027515;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085086.1 RefSeq gene 1027931 1030024 . - . ID=gene-LIO31_RS05235;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LIO31_RS05235 NZ_CP085086.1 Protein Homology CDS 1027931 1030024 . - 0 ID=cds-WP_074389881.1;Parent=gene-LIO31_RS05235;Dbxref=Genbank:WP_074389881.1;Name=WP_074389881.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591982.1;locus_tag=LIO31_RS05235;product=type I DNA topoisomerase;protein_id=WP_074389881.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1030117 1030959 . - . ID=gene-LIO31_RS05240;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LIO31_RS05240 NZ_CP085086.1 Protein Homology CDS 1030117 1030959 . - 0 ID=cds-WP_012775129.1;Parent=gene-LIO31_RS05240;Dbxref=Genbank:WP_012775129.1;Name=WP_012775129.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735834.1;locus_tag=LIO31_RS05240;product=DNA-processing protein DprA;protein_id=WP_012775129.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1031018 1031575 . - . ID=gene-LIO31_RS05245;Name=LIO31_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05245 NZ_CP085086.1 Protein Homology CDS 1031018 1031575 . - 0 ID=cds-WP_009909862.1;Parent=gene-LIO31_RS05245;Dbxref=Genbank:WP_009909862.1;Name=WP_009909862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917244.1;locus_tag=LIO31_RS05245;product=sugar O-acetyltransferase;protein_id=WP_009909862.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1031586 1031846 . - . ID=gene-LIO31_RS05250;Name=LIO31_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05250 NZ_CP085086.1 Protein Homology CDS 1031586 1031846 . - 0 ID=cds-WP_074389882.1;Parent=gene-LIO31_RS05250;Dbxref=Genbank:WP_074389882.1;Name=WP_074389882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909865.1;locus_tag=LIO31_RS05250;product=metal-sensitive transcriptional regulator;protein_id=WP_074389882.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1031953 1032276 . + . ID=gene-LIO31_RS05255;Name=LIO31_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05255 NZ_CP085086.1 Protein Homology CDS 1031953 1032276 . + 0 ID=cds-WP_024385727.1;Parent=gene-LIO31_RS05255;Dbxref=Genbank:WP_024385727.1;Name=WP_024385727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936495.1;locus_tag=LIO31_RS05255;product=rhodanese-like domain-containing protein;protein_id=WP_024385727.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1032273 1033925 . + . ID=gene-LIO31_RS05260;Name=LIO31_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05260 NZ_CP085086.1 Protein Homology CDS 1032273 1033925 . + 0 ID=cds-WP_074389883.1;Parent=gene-LIO31_RS05260;Dbxref=Genbank:WP_074389883.1;Name=WP_074389883.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922481.1;locus_tag=LIO31_RS05260;product=FAD-dependent oxidoreductase;protein_id=WP_074389883.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1034033 1034584 . + . ID=gene-LIO31_RS05265;Name=LIO31_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05265 NZ_CP085086.1 Protein Homology CDS 1034033 1034584 . + 0 ID=cds-WP_024405686.1;Parent=gene-LIO31_RS05265;Dbxref=Genbank:WP_024405686.1;Name=WP_024405686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646818.1;locus_tag=LIO31_RS05265;product=DUF1836 domain-containing protein;protein_id=WP_024405686.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1034574 1035224 . + . ID=gene-LIO31_RS05270;Name=LIO31_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05270 NZ_CP085086.1 Protein Homology CDS 1034574 1035224 . + 0 ID=cds-WP_024405685.1;Parent=gene-LIO31_RS05270;Dbxref=Genbank:WP_024405685.1;Name=WP_024405685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286719.1;locus_tag=LIO31_RS05270;product=hemolysin III family protein;protein_id=WP_024405685.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1035257 1036267 . - . ID=gene-LIO31_RS05275;Name=LIO31_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05275 NZ_CP085086.1 Protein Homology CDS 1035257 1036267 . - 0 ID=cds-WP_024405684.1;Parent=gene-LIO31_RS05275;Dbxref=Genbank:WP_024405684.1;Name=WP_024405684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445222.1;locus_tag=LIO31_RS05275;product=YdcF family protein;protein_id=WP_024405684.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1036264 1037043 . - . ID=gene-LIO31_RS05280;Name=LIO31_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05280 NZ_CP085086.1 Protein Homology CDS 1036264 1037043 . - 0 ID=cds-WP_074389884.1;Parent=gene-LIO31_RS05280;Dbxref=Genbank:WP_074389884.1;Name=WP_074389884.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195683.1;locus_tag=LIO31_RS05280;product=ribonuclease HII;protein_id=WP_074389884.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1037030 1037881 . - . ID=gene-LIO31_RS05285;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=LIO31_RS05285 NZ_CP085086.1 Protein Homology CDS 1037030 1037881 . - 0 ID=cds-WP_024405682.1;Parent=gene-LIO31_RS05285;Dbxref=Genbank:WP_024405682.1;Name=WP_024405682.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002962311.1;locus_tag=LIO31_RS05285;product=ribosome biogenesis GTPase YlqF;protein_id=WP_024405682.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1038058 1038525 . - . ID=gene-LIO31_RS05290;Name=LIO31_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05290 NZ_CP085086.1 Protein Homology CDS 1038058 1038525 . - 0 ID=cds-WP_074412210.1;Parent=gene-LIO31_RS05290;Dbxref=Genbank:WP_074412210.1;Name=WP_074412210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006532139.1;locus_tag=LIO31_RS05290;product=hypothetical protein;protein_id=WP_074412210.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1038607 1038744 . - . ID=gene-LIO31_RS05295;Name=LIO31_RS05295;end_range=1038744,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS05295;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1038607 1038744 . - 0 ID=cds-LIO31_RS05295;Parent=gene-LIO31_RS05295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1038744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398178.1;locus_tag=LIO31_RS05295;partial=true;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1038951 1041890 . - . ID=gene-LIO31_RS05300;Name=LIO31_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05300 NZ_CP085086.1 Protein Homology CDS 1038951 1041890 . - 0 ID=cds-WP_074412211.1;Parent=gene-LIO31_RS05300;Dbxref=Genbank:WP_074412211.1;Name=WP_074412211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638945.1;locus_tag=LIO31_RS05300;product=NPCBM/NEW2 domain-containing protein;protein_id=WP_074412211.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1042031 1042924 . - . ID=gene-LIO31_RS05305;Name=LIO31_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05305 NZ_CP085086.1 Protein Homology CDS 1042031 1042924 . - 0 ID=cds-WP_074412212.1;Parent=gene-LIO31_RS05305;Dbxref=Genbank:WP_074412212.1;Name=WP_074412212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638946.1;locus_tag=LIO31_RS05305;product=ROK family protein;protein_id=WP_074412212.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1042926 1044803 . - . ID=gene-LIO31_RS05310;Name=LIO31_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05310 NZ_CP085086.1 Protein Homology CDS 1042926 1044803 . - 0 ID=cds-WP_074412227.1;Parent=gene-LIO31_RS05310;Dbxref=Genbank:WP_074412227.1;Name=WP_074412227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195672.1;locus_tag=LIO31_RS05310;product=alpha-N-acetylgalactosaminidase;protein_id=WP_074412227.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1044793 1046127 . - . ID=gene-LIO31_RS05315;Name=LIO31_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05315 NZ_CP085086.1 Protein Homology CDS 1044793 1046127 . - 0 ID=cds-WP_074412213.1;Parent=gene-LIO31_RS05315;Dbxref=Genbank:WP_074412213.1;Name=WP_074412213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003066419.1;locus_tag=LIO31_RS05315;product=alpha-L-fucosidase;protein_id=WP_074412213.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1046124 1046963 . - . ID=gene-LIO31_RS05320;Name=LIO31_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05320 NZ_CP085086.1 Protein Homology CDS 1046124 1046963 . - 0 ID=cds-WP_074412214.1;Parent=gene-LIO31_RS05320;Dbxref=Genbank:WP_074412214.1;Name=WP_074412214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001819555.1;locus_tag=LIO31_RS05320;product=carbohydrate ABC transporter permease;protein_id=WP_074412214.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1046974 1047894 . - . ID=gene-LIO31_RS05325;Name=LIO31_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05325 NZ_CP085086.1 Protein Homology CDS 1046974 1047894 . - 0 ID=cds-WP_004195666.1;Parent=gene-LIO31_RS05325;Dbxref=Genbank:WP_004195666.1;Name=WP_004195666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195666.1;locus_tag=LIO31_RS05325;product=sugar ABC transporter permease;protein_id=WP_004195666.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1047946 1049244 . - . ID=gene-LIO31_RS05330;Name=LIO31_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05330 NZ_CP085086.1 Protein Homology CDS 1047946 1049244 . - 0 ID=cds-WP_226960889.1;Parent=gene-LIO31_RS05330;Dbxref=Genbank:WP_226960889.1;Name=WP_226960889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195663.1;locus_tag=LIO31_RS05330;product=extracellular solute-binding protein;protein_id=WP_226960889.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1049261 1049899 . - . ID=gene-LIO31_RS05335;Name=LIO31_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05335 NZ_CP085086.1 Protein Homology CDS 1049261 1049899 . - 0 ID=cds-WP_171841311.1;Parent=gene-LIO31_RS05335;Dbxref=Genbank:WP_171841311.1;Name=WP_171841311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001286141.1;locus_tag=LIO31_RS05335;product=L-fuculose-phosphate aldolase;protein_id=WP_171841311.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1049920 1051707 . - . ID=gene-LIO31_RS05340;Name=LIO31_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05340 NZ_CP085086.1 Protein Homology CDS 1049920 1051707 . - 0 ID=cds-WP_172046033.1;Parent=gene-LIO31_RS05340;Dbxref=Genbank:WP_172046033.1;Name=WP_172046033.1;Ontology_term=GO:0005996,GO:0019317,GO:0008736,GO:0030145;gbkey=CDS;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=monosaccharide metabolic process|0005996||IEA,fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638950.1;locus_tag=LIO31_RS05340;product=L-fucose isomerase;protein_id=WP_172046033.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1051691 1053118 . - . ID=gene-LIO31_RS05345;Name=LIO31_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05345 NZ_CP085086.1 Protein Homology CDS 1051691 1053118 . - 0 ID=cds-WP_074412218.1;Parent=gene-LIO31_RS05345;Dbxref=Genbank:WP_074412218.1;Name=WP_074412218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195657.1;locus_tag=LIO31_RS05345;product=rhamnulokinase;protein_id=WP_074412218.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1053277 1054044 . + . ID=gene-LIO31_RS05350;Name=LIO31_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05350 NZ_CP085086.1 Protein Homology CDS 1053277 1054044 . + 0 ID=cds-WP_074412219.1;Parent=gene-LIO31_RS05350;Dbxref=Genbank:WP_074412219.1;Name=WP_074412219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195655.1;locus_tag=LIO31_RS05350;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_074412219.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1054976 1055464 . - . ID=gene-LIO31_RS05355;Name=LIO31_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05355 NZ_CP085086.1 Protein Homology CDS 1054976 1055464 . - 0 ID=cds-WP_002936504.1;Parent=gene-LIO31_RS05355;Dbxref=Genbank:WP_002936504.1;Name=WP_002936504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939525.1;locus_tag=LIO31_RS05355;product=YkgJ family cysteine cluster protein;protein_id=WP_002936504.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1055516 1056163 . - . ID=gene-LIO31_RS05360;Name=LIO31_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05360 NZ_CP085086.1 Protein Homology CDS 1055516 1056163 . - 0 ID=cds-WP_074389886.1;Parent=gene-LIO31_RS05360;Dbxref=Genbank:WP_074389886.1;Name=WP_074389886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735825.1;locus_tag=LIO31_RS05360;product=Maf family protein;protein_id=WP_074389886.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1056215 1058305 . - . ID=gene-LIO31_RS05365;Name=nt5e;gbkey=Gene;gene=nt5e;gene_biotype=protein_coding;locus_tag=LIO31_RS05365 NZ_CP085086.1 Protein Homology CDS 1056215 1058305 . - 0 ID=cds-WP_170240035.1;Parent=gene-LIO31_RS05365;Dbxref=Genbank:WP_170240035.1;Name=WP_170240035.1;gbkey=CDS;gene=nt5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638963.1;locus_tag=LIO31_RS05365;product=cell surface ecto-5'-nucleotidase Nt5e;protein_id=WP_170240035.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1058436 1059707 . - . ID=gene-LIO31_RS05370;Name=LIO31_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05370 NZ_CP085086.1 Protein Homology CDS 1058436 1059707 . - 0 ID=cds-WP_074389888.1;Parent=gene-LIO31_RS05370;Dbxref=Genbank:WP_074389888.1;Name=WP_074389888.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939545.1;locus_tag=LIO31_RS05370;product=dihydroorotase;protein_id=WP_074389888.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1059747 1060400 . - . ID=gene-LIO31_RS05375;Name=LIO31_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05375 NZ_CP085086.1 Protein Homology CDS 1059747 1060400 . - 0 ID=cds-WP_002939547.1;Parent=gene-LIO31_RS05375;Dbxref=Genbank:WP_002939547.1;Name=WP_002939547.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841111.1;locus_tag=LIO31_RS05375;product=uracil-DNA glycosylase;protein_id=WP_002939547.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1060410 1061336 . - . ID=gene-LIO31_RS05380;Name=LIO31_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05380 NZ_CP085086.1 Protein Homology CDS 1060410 1061336 . - 0 ID=cds-WP_013730366.1;Parent=gene-LIO31_RS05380;Dbxref=Genbank:WP_013730366.1;Name=WP_013730366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730366.1;locus_tag=LIO31_RS05380;product=glycosyltransferase family 2 protein;protein_id=WP_013730366.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1061445 1062077 . - . ID=gene-LIO31_RS05385;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LIO31_RS05385 NZ_CP085086.1 Protein Homology CDS 1061445 1062077 . - 0 ID=cds-WP_014637891.1;Parent=gene-LIO31_RS05385;Dbxref=Genbank:WP_014637891.1;Name=WP_014637891.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775594.1;locus_tag=LIO31_RS05385;product=orotate phosphoribosyltransferase;protein_id=WP_014637891.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1062215 1062541 . - . ID=gene-LIO31_RS05390;Name=LIO31_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05390 NZ_CP085086.1 Protein Homology CDS 1062215 1062541 . - 0 ID=cds-WP_013730368.1;Parent=gene-LIO31_RS05390;Dbxref=Genbank:WP_013730368.1;Name=WP_013730368.1;Ontology_term=GO:0006796,GO:0000287,GO:0004427,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939556.1;locus_tag=LIO31_RS05390;product=inorganic diphosphatase;protein_id=WP_013730368.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1062534 1063229 . - . ID=gene-LIO31_RS05395;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LIO31_RS05395 NZ_CP085086.1 Protein Homology CDS 1062534 1063229 . - 0 ID=cds-WP_074389889.1;Parent=gene-LIO31_RS05395;Dbxref=Genbank:WP_074389889.1;Name=WP_074389889.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922496.1;locus_tag=LIO31_RS05395;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_074389889.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1063394 1064335 . - . ID=gene-LIO31_RS05400;Name=LIO31_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05400 NZ_CP085086.1 Protein Homology CDS 1063394 1064335 . - 0 ID=cds-WP_044755125.1;Parent=gene-LIO31_RS05400;Dbxref=Genbank:WP_044755125.1;Name=WP_044755125.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637011.1;locus_tag=LIO31_RS05400;product=dihydroorotate dehydrogenase;protein_id=WP_044755125.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1064345 1065157 . - . ID=gene-LIO31_RS05405;Name=LIO31_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05405 NZ_CP085086.1 Protein Homology CDS 1064345 1065157 . - 0 ID=cds-WP_264295849.1;Parent=gene-LIO31_RS05405;Dbxref=Genbank:WP_264295849.1;Name=WP_264295849.1;Ontology_term=GO:0006221,GO:0016491,GO:0050660,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014635980.1;locus_tag=LIO31_RS05405;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=WP_264295849.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1065332 1066237 . + . ID=gene-LIO31_RS05410;Name=LIO31_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05410 NZ_CP085086.1 Protein Homology CDS 1065332 1066237 . + 0 ID=cds-WP_074389891.1;Parent=gene-LIO31_RS05410;Dbxref=Genbank:WP_074389891.1;Name=WP_074389891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637886.1;locus_tag=LIO31_RS05410;product=LysR family transcriptional regulator;protein_id=WP_074389891.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1066407 1067534 . + . ID=gene-LIO31_RS05415;Name=LIO31_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05415 NZ_CP085086.1 Protein Homology CDS 1066407 1067534 . + 0 ID=cds-WP_011922500.1;Parent=gene-LIO31_RS05415;Dbxref=Genbank:WP_011922500.1;Name=WP_011922500.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935156.1;locus_tag=LIO31_RS05415;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_011922500.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1067547 1068662 . + . ID=gene-LIO31_RS05420;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=LIO31_RS05420 NZ_CP085086.1 Protein Homology CDS 1067547 1068662 . + 0 ID=cds-WP_011922501.1;Parent=gene-LIO31_RS05420;Dbxref=Genbank:WP_011922501.1;Name=WP_011922501.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgD;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922501.1;locus_tag=LIO31_RS05420;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=WP_011922501.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1068671 1070116 . + . ID=gene-LIO31_RS05425;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=LIO31_RS05425 NZ_CP085086.1 Protein Homology CDS 1068671 1070116 . + 0 ID=cds-WP_226960891.1;Parent=gene-LIO31_RS05425;Dbxref=Genbank:WP_226960891.1;Name=WP_226960891.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935158.1;locus_tag=LIO31_RS05425;product=glycogen synthase GlgA;protein_id=WP_226960891.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1070189 1072027 . + . ID=gene-LIO31_RS05430;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LIO31_RS05430 NZ_CP085086.1 Protein Homology CDS 1070189 1072027 . + 0 ID=cds-WP_044758746.1;Parent=gene-LIO31_RS05430;Dbxref=Genbank:WP_044758746.1;Name=WP_044758746.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909892.1;locus_tag=LIO31_RS05430;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_044758746.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1072155 1072955 . - . ID=gene-LIO31_RS05435;Name=LIO31_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05435 NZ_CP085086.1 Protein Homology CDS 1072155 1072955 . - 0 ID=cds-WP_074389428.1;Parent=gene-LIO31_RS05435;Dbxref=Genbank:WP_074389428.1;Name=WP_074389428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735814.1;locus_tag=LIO31_RS05435;product=transporter substrate-binding domain-containing protein;protein_id=WP_074389428.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1073127 1073939 . - . ID=gene-LIO31_RS05440;Name=LIO31_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05440 NZ_CP085086.1 Protein Homology CDS 1073127 1073939 . - 0 ID=cds-WP_014636396.1;Parent=gene-LIO31_RS05440;Dbxref=Genbank:WP_014636396.1;Name=WP_014636396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637882.1;locus_tag=LIO31_RS05440;product=transporter substrate-binding domain-containing protein;protein_id=WP_014636396.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1074136 1074603 . - . ID=gene-LIO31_RS05445;Name=LIO31_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05445 NZ_CP085086.1 Protein Homology CDS 1074136 1074603 . - 0 ID=cds-WP_012028182.1;Parent=gene-LIO31_RS05445;Dbxref=Genbank:WP_012028182.1;Name=WP_012028182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028182.1;locus_tag=LIO31_RS05445;product=8-oxo-dGTP diphosphatase;protein_id=WP_012028182.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1074596 1075099 . - . ID=gene-LIO31_RS05450;Name=LIO31_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05450 NZ_CP085086.1 Protein Homology CDS 1074596 1075099 . - 0 ID=cds-WP_171840760.1;Parent=gene-LIO31_RS05450;Dbxref=Genbank:WP_171840760.1;Name=WP_171840760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730376.1;locus_tag=LIO31_RS05450;product=GNAT family N-acetyltransferase;protein_id=WP_171840760.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1075177 1080957 . - . ID=gene-LIO31_RS05455;Name=LIO31_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05455 NZ_CP085086.1 Protein Homology CDS 1075177 1080957 . - 0 ID=cds-WP_074389892.1;Parent=gene-LIO31_RS05455;Dbxref=Genbank:WP_074389892.1;Name=WP_074389892.1;Ontology_term=GO:0004222,GO:0008270,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775141.1;locus_tag=LIO31_RS05455;product=ZmpA/ZmpB/ZmpC family metallo-endopeptidase;protein_id=WP_074389892.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1081130 1081222 . - . ID=gene-LIO31_RS05460;Name=LIO31_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05460 NZ_CP085086.1 Protein Homology CDS 1081130 1081222 . - 0 ID=cds-WP_225938945.1;Parent=gene-LIO31_RS05460;Dbxref=Genbank:WP_225938945.1;Name=WP_225938945.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF014232.2;locus_tag=LIO31_RS05460;product=UvrB/UvrC motif-containing protein;protein_id=WP_225938945.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1081271 1083094 . - . ID=gene-LIO31_RS05465;Name=LIO31_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05465 NZ_CP085086.1 Protein Homology CDS 1081271 1083094 . - 0 ID=cds-WP_014636397.1;Parent=gene-LIO31_RS05465;Dbxref=Genbank:WP_014636397.1;Name=WP_014636397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636397.1;locus_tag=LIO31_RS05465;product=DUF2971 domain-containing protein;protein_id=WP_014636397.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1083109 1085094 . - . ID=gene-LIO31_RS05470;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LIO31_RS05470 NZ_CP085086.1 Protein Homology CDS 1083109 1085094 . - 0 ID=cds-WP_226960892.1;Parent=gene-LIO31_RS05470;Dbxref=Genbank:WP_226960892.1;Name=WP_226960892.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935167.1;locus_tag=LIO31_RS05470;product=excinuclease ABC subunit UvrB;protein_id=WP_226960892.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1085292 1087490 . + . ID=gene-LIO31_RS05475;Name=LIO31_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05475 NZ_CP085086.1 Protein Homology CDS 1085292 1087490 . + 0 ID=cds-WP_074389893.1;Parent=gene-LIO31_RS05475;Dbxref=Genbank:WP_074389893.1;Name=WP_074389893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735809.1;locus_tag=LIO31_RS05475;product=ABC transporter substrate-binding protein/permease;protein_id=WP_074389893.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1087490 1088230 . + . ID=gene-LIO31_RS05480;Name=LIO31_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05480 NZ_CP085086.1 Protein Homology CDS 1087490 1088230 . + 0 ID=cds-WP_002940438.1;Parent=gene-LIO31_RS05480;Dbxref=Genbank:WP_002940438.1;Name=WP_002940438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=LIO31_RS05480;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002940438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1088288 1088779 . - . ID=gene-LIO31_RS05485;Name=LIO31_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05485 NZ_CP085086.1 Protein Homology CDS 1088288 1088779 . - 0 ID=cds-WP_074389894.1;Parent=gene-LIO31_RS05485;Dbxref=Genbank:WP_074389894.1;Name=WP_074389894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922516.1;locus_tag=LIO31_RS05485;product=GNAT family N-acetyltransferase;protein_id=WP_074389894.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1089079 1090610 . + . ID=gene-LIO31_RS05490;Name=LIO31_RS05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS05490;pseudo=true NZ_CP085086.1 Protein Homology CDS 1089079 1090610 . + 0 ID=cds-LIO31_RS05490;Parent=gene-LIO31_RS05490;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735808.1;locus_tag=LIO31_RS05490;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1090688 1091968 . - . ID=gene-LIO31_RS05495;Name=LIO31_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05495 NZ_CP085086.1 Protein Homology CDS 1090688 1091968 . - 0 ID=cds-WP_074412220.1;Parent=gene-LIO31_RS05495;Dbxref=Genbank:WP_074412220.1;Name=WP_074412220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604466.1;locus_tag=LIO31_RS05495;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=WP_074412220.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1092153 1092773 . - . ID=gene-LIO31_RS05500;Name=LIO31_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05500 NZ_CP085086.1 Protein Homology CDS 1092153 1092773 . - 0 ID=cds-WP_023370082.1;Parent=gene-LIO31_RS05500;Dbxref=Genbank:WP_023370082.1;Name=WP_023370082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250587.1;locus_tag=LIO31_RS05500;product=hypothetical protein;protein_id=WP_023370082.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1093108 1094001 . - . ID=gene-LIO31_RS05505;Name=LIO31_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05505 NZ_CP085086.1 Protein Homology CDS 1093108 1094001 . - 0 ID=cds-WP_074389896.1;Parent=gene-LIO31_RS05505;Dbxref=Genbank:WP_074389896.1;Name=WP_074389896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935214.1;locus_tag=LIO31_RS05505;product=aldose 1-epimerase family protein;protein_id=WP_074389896.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1094068 1095474 . - . ID=gene-LIO31_RS05510;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=LIO31_RS05510 NZ_CP085086.1 Protein Homology CDS 1094068 1095474 . - 0 ID=cds-WP_074389897.1;Parent=gene-LIO31_RS05510;Dbxref=Genbank:WP_074389897.1;Name=WP_074389897.1;Ontology_term=GO:0006012,GO:0004565,GO:0009341;gbkey=CDS;gene=lacG;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003060941.1;locus_tag=LIO31_RS05510;product=6-phospho-beta-galactosidase;protein_id=WP_074389897.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1095709 1097388 . - . ID=gene-LIO31_RS05515;Name=LIO31_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05515 NZ_CP085086.1 Protein Homology CDS 1095709 1097388 . - 0 ID=cds-WP_023370076.1;Parent=gene-LIO31_RS05515;Dbxref=Genbank:WP_023370076.1;Name=WP_023370076.1;Ontology_term=GO:0009401,GO:0015155,GO:0019197;gbkey=CDS;go_component=phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048452.1;locus_tag=LIO31_RS05515;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_023370076.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1097388 1097705 . - . ID=gene-LIO31_RS05520;Name=LIO31_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05520 NZ_CP085086.1 Protein Homology CDS 1097388 1097705 . - 0 ID=cds-WP_023370074.1;Parent=gene-LIO31_RS05520;Dbxref=Genbank:WP_023370074.1;Name=WP_023370074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730102.1;locus_tag=LIO31_RS05520;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_023370074.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1097836 1098669 . - . ID=gene-LIO31_RS05525;Name=LIO31_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05525 NZ_CP085086.1 Protein Homology CDS 1097836 1098669 . - 0 ID=cds-WP_024402532.1;Parent=gene-LIO31_RS05525;Dbxref=Genbank:WP_024402532.1;Name=WP_024402532.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770255.1;locus_tag=LIO31_RS05525;product=PRD domain-containing protein;protein_id=WP_024402532.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1098857 1099834 . - . ID=gene-LIO31_RS05530;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=LIO31_RS05530 NZ_CP085086.1 Protein Homology CDS 1098857 1099834 . - 0 ID=cds-WP_074389898.1;Parent=gene-LIO31_RS05530;Dbxref=Genbank:WP_074389898.1;Name=WP_074389898.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775145.1;locus_tag=LIO31_RS05530;product=tagatose-bisphosphate aldolase;protein_id=WP_074389898.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1099836 1100768 . - . ID=gene-LIO31_RS05535;Name=LIO31_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05535 NZ_CP085086.1 Protein Homology CDS 1099836 1100768 . - 0 ID=cds-WP_074389899.1;Parent=gene-LIO31_RS05535;Dbxref=Genbank:WP_074389899.1;Name=WP_074389899.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250260.1;locus_tag=LIO31_RS05535;product=tagatose-6-phosphate kinase;protein_id=WP_074389899.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1100778 1101293 . - . ID=gene-LIO31_RS05540;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=LIO31_RS05540 NZ_CP085086.1 Protein Homology CDS 1100778 1101293 . - 0 ID=cds-WP_024408802.1;Parent=gene-LIO31_RS05540;Dbxref=Genbank:WP_024408802.1;Name=WP_024408802.1;gbkey=CDS;gene=lacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027025.1;locus_tag=LIO31_RS05540;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_024408802.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1101320 1101742 . - . ID=gene-LIO31_RS05545;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=LIO31_RS05545 NZ_CP085086.1 Protein Homology CDS 1101320 1101742 . - 0 ID=cds-WP_074389900.1;Parent=gene-LIO31_RS05545;Dbxref=Genbank:WP_074389900.1;Name=WP_074389900.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacA;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002982747.1;locus_tag=LIO31_RS05545;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_074389900.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1101959 1102726 . - . ID=gene-LIO31_RS05550;Name=LIO31_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05550 NZ_CP085086.1 Protein Homology CDS 1101959 1102726 . - 0 ID=cds-WP_024397918.1;Parent=gene-LIO31_RS05550;Dbxref=Genbank:WP_024397918.1;Name=WP_024397918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027028.1;locus_tag=LIO31_RS05550;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_024397918.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1103006 1103761 . + . ID=gene-LIO31_RS05555;Name=LIO31_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05555 NZ_CP085086.1 Protein Homology CDS 1103006 1103761 . + 0 ID=cds-WP_024383715.1;Parent=gene-LIO31_RS05555;Dbxref=Genbank:WP_024383715.1;Name=WP_024383715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909915.1;locus_tag=LIO31_RS05555;product=hypothetical protein;protein_id=WP_024383715.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1103850 1104038 . + . ID=gene-LIO31_RS05560;Name=LIO31_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05560 NZ_CP085086.1 Protein Homology CDS 1103850 1104038 . + 0 ID=cds-WP_002935229.1;Parent=gene-LIO31_RS05560;Dbxref=Genbank:WP_002935229.1;Name=WP_002935229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775147.1;locus_tag=LIO31_RS05560;product=helix-turn-helix domain-containing protein;protein_id=WP_002935229.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1104129 1105175 . + . ID=gene-LIO31_RS05565;Name=LIO31_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05565 NZ_CP085086.1 Protein Homology CDS 1104129 1105175 . + 0 ID=cds-WP_074389901.1;Parent=gene-LIO31_RS05565;Dbxref=Genbank:WP_074389901.1;Name=WP_074389901.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004269878.1;locus_tag=LIO31_RS05565;product=tyrosine-type recombinase/integrase;protein_id=WP_074389901.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1105401 1105943 . - . ID=gene-LIO31_RS05570;Name=LIO31_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05570 NZ_CP085086.1 Protein Homology CDS 1105401 1105943 . - 0 ID=cds-WP_074389902.1;Parent=gene-LIO31_RS05570;Dbxref=Genbank:WP_074389902.1;Name=WP_074389902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637873.1;locus_tag=LIO31_RS05570;product=hypothetical protein;protein_id=WP_074389902.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1105963 1106433 . - . ID=gene-LIO31_RS05575;Name=LIO31_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05575 NZ_CP085086.1 Protein Homology CDS 1105963 1106433 . - 0 ID=cds-WP_074389903.1;Parent=gene-LIO31_RS05575;Dbxref=Genbank:WP_074389903.1;Name=WP_074389903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935233.1;locus_tag=LIO31_RS05575;product=hypothetical protein;protein_id=WP_074389903.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1106564 1107364 . + . ID=gene-LIO31_RS05580;Name=LIO31_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05580 NZ_CP085086.1 Protein Homology CDS 1106564 1107364 . + 0 ID=cds-WP_024385762.1;Parent=gene-LIO31_RS05580;Dbxref=Genbank:WP_024385762.1;Name=WP_024385762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646784.1;locus_tag=LIO31_RS05580;product=XRE family transcriptional regulator;protein_id=WP_024385762.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1108027 1109187 . - . ID=gene-LIO31_RS05585;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LIO31_RS05585 NZ_CP085086.1 Protein Homology CDS 1108027 1109187 . - 0 ID=cds-WP_170240038.1;Parent=gene-LIO31_RS05585;Dbxref=Genbank:WP_170240038.1;Name=WP_170240038.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646783.1;locus_tag=LIO31_RS05585;product=A/G-specific adenine glycosylase;protein_id=WP_170240038.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1109365 1109757 . - . ID=gene-LIO31_RS05590;Name=LIO31_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05590 NZ_CP085086.1 Protein Homology CDS 1109365 1109757 . - 0 ID=cds-WP_170240039.1;Parent=gene-LIO31_RS05590;Dbxref=Genbank:WP_170240039.1;Name=WP_170240039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027036.1;locus_tag=LIO31_RS05590;product=PaaI family thioesterase;protein_id=WP_170240039.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1109741 1111483 . - . ID=gene-LIO31_RS05595;Name=LIO31_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05595 NZ_CP085086.1 Protein Homology CDS 1109741 1111483 . - 0 ID=cds-WP_074389905.1;Parent=gene-LIO31_RS05595;Dbxref=Genbank:WP_074389905.1;Name=WP_074389905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028203.1;locus_tag=LIO31_RS05595;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389905.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1111470 1113209 . - . ID=gene-LIO31_RS05600;Name=LIO31_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05600 NZ_CP085086.1 Protein Homology CDS 1111470 1113209 . - 0 ID=cds-WP_074389906.1;Parent=gene-LIO31_RS05600;Dbxref=Genbank:WP_074389906.1;Name=WP_074389906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940726.1;locus_tag=LIO31_RS05600;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389906.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1113211 1114185 . - . ID=gene-LIO31_RS05605;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LIO31_RS05605 NZ_CP085086.1 Protein Homology CDS 1113211 1114185 . - 0 ID=cds-WP_002935239.1;Parent=gene-LIO31_RS05605;Dbxref=Genbank:WP_002935239.1;Name=WP_002935239.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935239.1;locus_tag=LIO31_RS05605;product=phosphate acetyltransferase;protein_id=WP_002935239.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1114203 1115096 . - . ID=gene-LIO31_RS05610;Name=LIO31_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05610 NZ_CP085086.1 Protein Homology CDS 1114203 1115096 . - 0 ID=cds-WP_012027041.1;Parent=gene-LIO31_RS05610;Dbxref=Genbank:WP_012027041.1;Name=WP_012027041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940727.1;locus_tag=LIO31_RS05610;product=RluA family pseudouridine synthase;protein_id=WP_012027041.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1115096 1115923 . - . ID=gene-LIO31_RS05615;Name=LIO31_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05615 NZ_CP085086.1 Protein Homology CDS 1115096 1115923 . - 0 ID=cds-WP_032500985.1;Parent=gene-LIO31_RS05615;Dbxref=Genbank:WP_032500985.1;Name=WP_032500985.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378750.1;locus_tag=LIO31_RS05615;product=NAD kinase;protein_id=WP_032500985.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1115898 1116569 . - . ID=gene-LIO31_RS05620;Name=LIO31_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05620 NZ_CP085086.1 Protein Homology CDS 1115898 1116569 . - 0 ID=cds-WP_002935242.1;Parent=gene-LIO31_RS05620;Dbxref=Genbank:WP_002935242.1;Name=WP_002935242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935242.1;locus_tag=LIO31_RS05620;product=GTP pyrophosphokinase family protein;protein_id=WP_002935242.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1116656 1117222 . + . ID=gene-LIO31_RS05625;Name=LIO31_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05625 NZ_CP085086.1 Protein Homology CDS 1116656 1117222 . + 0 ID=cds-WP_002935243.1;Parent=gene-LIO31_RS05625;Dbxref=Genbank:WP_002935243.1;Name=WP_002935243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646779.1;locus_tag=LIO31_RS05625;product=CYTH domain-containing protein;protein_id=WP_002935243.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1117367 1118344 . + . ID=gene-LIO31_RS05630;Name=LIO31_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05630 NZ_CP085086.1 Protein Homology CDS 1117367 1118344 . + 0 ID=cds-WP_012775438.1;Parent=gene-LIO31_RS05630;Dbxref=Genbank:WP_012775438.1;Name=WP_012775438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940729.1;locus_tag=LIO31_RS05630;product=ribose-phosphate diphosphokinase;protein_id=WP_012775438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1118355 1119470 . + . ID=gene-LIO31_RS05635;Name=LIO31_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05635 NZ_CP085086.1 Protein Homology CDS 1118355 1119470 . + 0 ID=cds-WP_012028207.1;Parent=gene-LIO31_RS05635;Dbxref=Genbank:WP_012028207.1;Name=WP_012028207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935247.1;locus_tag=LIO31_RS05635;product=cysteine desulfurase;protein_id=WP_012028207.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1119472 1119816 . + . ID=gene-LIO31_RS05640;Name=LIO31_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05640 NZ_CP085086.1 Protein Homology CDS 1119472 1119816 . + 0 ID=cds-WP_002935248.1;Parent=gene-LIO31_RS05640;Dbxref=Genbank:WP_002935248.1;Name=WP_002935248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935248.1;locus_tag=LIO31_RS05640;product=DUF1831 domain-containing protein;protein_id=WP_002935248.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1119818 1120021 . + . ID=gene-LIO31_RS05645;Name=LIO31_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05645 NZ_CP085086.1 Protein Homology CDS 1119818 1120021 . + 0 ID=cds-WP_012775154.1;Parent=gene-LIO31_RS05645;Dbxref=Genbank:WP_012775154.1;Name=WP_012775154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935250.1;locus_tag=LIO31_RS05645;product=DUF4649 family protein;protein_id=WP_012775154.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1120156 1120794 . + . ID=gene-LIO31_RS05650;Name=LIO31_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05650 NZ_CP085086.1 Protein Homology CDS 1120156 1120794 . + 0 ID=cds-WP_002935251.1;Parent=gene-LIO31_RS05650;Dbxref=Genbank:WP_002935251.1;Name=WP_002935251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735795.1;locus_tag=LIO31_RS05650;product=redox-sensing transcriptional repressor Rex;protein_id=WP_002935251.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1120798 1121490 . + . ID=gene-LIO31_RS05655;Name=LIO31_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05655 NZ_CP085086.1 Protein Homology CDS 1120798 1121490 . + 0 ID=cds-WP_012028208.1;Parent=gene-LIO31_RS05655;Dbxref=Genbank:WP_012028208.1;Name=WP_012028208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735794.1;locus_tag=LIO31_RS05655;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_012028208.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1121487 1122156 . - . ID=gene-LIO31_RS05660;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=LIO31_RS05660;pseudo=true NZ_CP085086.1 Protein Homology CDS 1121487 1122156 . - 0 ID=cds-LIO31_RS05660;Parent=gene-LIO31_RS05660;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775155.1;locus_tag=LIO31_RS05660;product=DNA repair protein RadC;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1122269 1123018 . - . ID=gene-LIO31_RS05665;Name=LIO31_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05665 NZ_CP085086.1 Protein Homology CDS 1122269 1123018 . - 0 ID=cds-WP_012028210.1;Parent=gene-LIO31_RS05665;Dbxref=Genbank:WP_012028210.1;Name=WP_012028210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028210.1;locus_tag=LIO31_RS05665;product=class A sortase;protein_id=WP_012028210.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1123025 1125469 . - . ID=gene-LIO31_RS05670;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LIO31_RS05670 NZ_CP085086.1 Protein Homology CDS 1123025 1125469 . - 0 ID=cds-WP_012027057.1;Parent=gene-LIO31_RS05670;Dbxref=Genbank:WP_012027057.1;Name=WP_012027057.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940813.1;locus_tag=LIO31_RS05670;product=DNA gyrase subunit A;protein_id=WP_012027057.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1125658 1126641 . + . ID=gene-LIO31_RS05675;Name=LIO31_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05675 NZ_CP085086.1 Protein Homology CDS 1125658 1126641 . + 0 ID=cds-WP_002935259.1;Parent=gene-LIO31_RS05675;Dbxref=Genbank:WP_002935259.1;Name=WP_002935259.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003050541.1;locus_tag=LIO31_RS05675;product=L-lactate dehydrogenase;protein_id=WP_002935259.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1126684 1126917 . - . ID=gene-LIO31_RS05680;Name=LIO31_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05680 NZ_CP085086.1 Protein Homology CDS 1126684 1126917 . - 0 ID=cds-WP_012028211.1;Parent=gene-LIO31_RS05680;Dbxref=Genbank:WP_012028211.1;Name=WP_012028211.1;Ontology_term=GO:0008703;gbkey=CDS;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028211.1;locus_tag=LIO31_RS05680;product=dihydrofolate reductase family protein;protein_id=WP_012028211.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1126921 1127214 . - . ID=gene-LIO31_RS05685;Name=LIO31_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05685 NZ_CP085086.1 Protein Homology CDS 1126921 1127214 . - 0 ID=cds-WP_225535469.1;Parent=gene-LIO31_RS05685;Dbxref=Genbank:WP_225535469.1;Name=WP_225535469.1;Ontology_term=GO:0008703;gbkey=CDS;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA;inference=COORDINATES: protein motif:HMM:NF013989.2;locus_tag=LIO31_RS05685;product=dihydrofolate reductase family protein;protein_id=WP_225535469.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1127370 1128323 . - . ID=gene-LIO31_RS05690;Name=LIO31_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05690 NZ_CP085086.1 Protein Homology CDS 1127370 1128323 . - 0 ID=cds-WP_012775589.1;Parent=gene-LIO31_RS05690;Dbxref=Genbank:WP_012775589.1;Name=WP_012775589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060306.1;locus_tag=LIO31_RS05690;product=ABC transporter permease;protein_id=WP_012775589.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1128325 1129386 . - . ID=gene-LIO31_RS05695;Name=LIO31_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05695 NZ_CP085086.1 Protein Homology CDS 1128325 1129386 . - 0 ID=cds-WP_002935270.1;Parent=gene-LIO31_RS05695;Dbxref=Genbank:WP_002935270.1;Name=WP_002935270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935270.1;locus_tag=LIO31_RS05695;product=ABC transporter permease;protein_id=WP_002935270.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1129379 1130914 . - . ID=gene-LIO31_RS05700;Name=LIO31_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05700 NZ_CP085086.1 Protein Homology CDS 1129379 1130914 . - 0 ID=cds-WP_002935272.1;Parent=gene-LIO31_RS05700;Dbxref=Genbank:WP_002935272.1;Name=WP_002935272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940835.1;locus_tag=LIO31_RS05700;product=ABC transporter ATP-binding protein;protein_id=WP_002935272.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1131109 1132176 . - . ID=gene-LIO31_RS05705;Name=LIO31_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05705 NZ_CP085086.1 Protein Homology CDS 1131109 1132176 . - 0 ID=cds-WP_012028212.1;Parent=gene-LIO31_RS05705;Dbxref=Genbank:WP_012028212.1;Name=WP_012028212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646778.1;locus_tag=LIO31_RS05705;product=BMP family protein;protein_id=WP_012028212.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1132257 1132646 . - . ID=gene-LIO31_RS05710;Name=LIO31_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05710 NZ_CP085086.1 Protein Homology CDS 1132257 1132646 . - 0 ID=cds-WP_012775156.1;Parent=gene-LIO31_RS05710;Dbxref=Genbank:WP_012775156.1;Name=WP_012775156.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775156.1;locus_tag=LIO31_RS05710;product=cytidine deaminase;protein_id=WP_012775156.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1132633 1133295 . - . ID=gene-LIO31_RS05715;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LIO31_RS05715 NZ_CP085086.1 Protein Homology CDS 1132633 1133295 . - 0 ID=cds-WP_002935276.1;Parent=gene-LIO31_RS05715;Dbxref=Genbank:WP_002935276.1;Name=WP_002935276.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011836882.1;locus_tag=LIO31_RS05715;product=deoxyribose-phosphate aldolase;protein_id=WP_002935276.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1133311 1134588 . - . ID=gene-LIO31_RS05720;Name=LIO31_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05720 NZ_CP085086.1 Protein Homology CDS 1133311 1134588 . - 0 ID=cds-WP_074389907.1;Parent=gene-LIO31_RS05720;Dbxref=Genbank:WP_074389907.1;Name=WP_074389907.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018543466.1;locus_tag=LIO31_RS05720;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_074389907.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1134585 1135175 . - . ID=gene-LIO31_RS05725;Name=LIO31_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05725 NZ_CP085086.1 Protein Homology CDS 1134585 1135175 . - 0 ID=cds-WP_074389908.1;Parent=gene-LIO31_RS05725;Dbxref=Genbank:WP_074389908.1;Name=WP_074389908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637855.1;locus_tag=LIO31_RS05725;product=class I SAM-dependent methyltransferase;protein_id=WP_074389908.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1135284 1136204 . + . ID=gene-LIO31_RS05730;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=LIO31_RS05730 NZ_CP085086.1 Protein Homology CDS 1135284 1136204 . + 0 ID=cds-WP_002935283.1;Parent=gene-LIO31_RS05730;Dbxref=Genbank:WP_002935283.1;Name=WP_002935283.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009568566.1;locus_tag=LIO31_RS05730;product=type I pantothenate kinase;protein_id=WP_002935283.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1136263 1136511 . + . ID=gene-LIO31_RS05735;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LIO31_RS05735 NZ_CP085086.1 Protein Homology CDS 1136263 1136511 . + 0 ID=cds-WP_012027069.1;Parent=gene-LIO31_RS05735;Dbxref=Genbank:WP_012027069.1;Name=WP_012027069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368578.1;locus_tag=LIO31_RS05735;product=30S ribosomal protein S20;protein_id=WP_012027069.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1136773 1138002 . - . ID=gene-LIO31_RS05740;Name=LIO31_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05740 NZ_CP085086.1 Protein Homology CDS 1136773 1138002 . - 0 ID=cds-WP_023369936.1;Parent=gene-LIO31_RS05740;Dbxref=Genbank:WP_023369936.1;Name=WP_023369936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637854.1;locus_tag=LIO31_RS05740;product=transglutaminase;protein_id=WP_023369936.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1138326 1139705 . - . ID=gene-LIO31_RS05745;Name=LIO31_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05745 NZ_CP085086.1 Protein Homology CDS 1138326 1139705 . - 0 ID=cds-WP_024383407.1;Parent=gene-LIO31_RS05745;Dbxref=Genbank:WP_024383407.1;Name=WP_024383407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027074.1;locus_tag=LIO31_RS05745;product=HAMP domain-containing histidine kinase;protein_id=WP_024383407.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1139698 1140369 . - . ID=gene-LIO31_RS05750;Name=LIO31_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05750 NZ_CP085086.1 Protein Homology CDS 1139698 1140369 . - 0 ID=cds-WP_024394126.1;Parent=gene-LIO31_RS05750;Dbxref=Genbank:WP_024394126.1;Name=WP_024394126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637852.1;locus_tag=LIO31_RS05750;product=response regulator transcription factor;protein_id=WP_024394126.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1140563 1140943 . - . ID=gene-LIO31_RS05755;Name=LIO31_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05755 NZ_CP085086.1 Protein Homology CDS 1140563 1140943 . - 0 ID=cds-WP_023369940.1;Parent=gene-LIO31_RS05755;Dbxref=Genbank:WP_023369940.1;Name=WP_023369940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027076.1;locus_tag=LIO31_RS05755;product=hypothetical protein;protein_id=WP_023369940.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1141238 1142530 . + . ID=gene-LIO31_RS05760;Name=LIO31_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05760 NZ_CP085086.1 Protein Homology CDS 1141238 1142530 . + 0 ID=cds-WP_226960943.1-2;Parent=gene-LIO31_RS05760;Dbxref=Genbank:WP_226960943.1;Name=WP_226960943.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS05760;product=IS110 family transposase;protein_id=WP_226960943.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1142732 1143388 . - . ID=gene-LIO31_RS05765;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LIO31_RS05765 NZ_CP085086.1 Protein Homology CDS 1142732 1143388 . - 0 ID=cds-WP_002937611.1;Parent=gene-LIO31_RS05765;Dbxref=Genbank:WP_002937611.1;Name=WP_002937611.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946475.1;locus_tag=LIO31_RS05765;product=phosphate signaling complex protein PhoU;protein_id=WP_002937611.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1143417 1144175 . - . ID=gene-LIO31_RS05770;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LIO31_RS05770 NZ_CP085086.1 Protein Homology CDS 1143417 1144175 . - 0 ID=cds-WP_002937614.1;Parent=gene-LIO31_RS05770;Dbxref=Genbank:WP_002937614.1;Name=WP_002937614.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294590.1;locus_tag=LIO31_RS05770;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002937614.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1144187 1144990 . - . ID=gene-LIO31_RS05775;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LIO31_RS05775 NZ_CP085086.1 Protein Homology CDS 1144187 1144990 . - 0 ID=cds-WP_074389641.1;Parent=gene-LIO31_RS05775;Dbxref=Genbank:WP_074389641.1;Name=WP_074389641.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852852.1;locus_tag=LIO31_RS05775;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_074389641.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1145015 1145902 . - . ID=gene-LIO31_RS05780;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LIO31_RS05780 NZ_CP085086.1 Protein Homology CDS 1145015 1145902 . - 0 ID=cds-WP_074389640.1;Parent=gene-LIO31_RS05780;Dbxref=Genbank:WP_074389640.1;Name=WP_074389640.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019316415.1;locus_tag=LIO31_RS05780;product=phosphate ABC transporter permease PstA;protein_id=WP_074389640.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1145892 1146809 . - . ID=gene-LIO31_RS05785;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LIO31_RS05785 NZ_CP085086.1 Protein Homology CDS 1145892 1146809 . - 0 ID=cds-WP_002937619.1;Parent=gene-LIO31_RS05785;Dbxref=Genbank:WP_002937619.1;Name=WP_002937619.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378778.1;locus_tag=LIO31_RS05785;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_002937619.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1146812 1147681 . - . ID=gene-LIO31_RS05790;Name=LIO31_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05790 NZ_CP085086.1 Protein Homology CDS 1146812 1147681 . - 0 ID=cds-WP_014635997.1;Parent=gene-LIO31_RS05790;Dbxref=Genbank:WP_014635997.1;Name=WP_014635997.1;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646776.1;locus_tag=LIO31_RS05790;product=phosphate ABC transporter substrate-binding protein PstS family protein;protein_id=WP_014635997.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1147819 1149120 . - . ID=gene-LIO31_RS05795;Name=LIO31_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05795 NZ_CP085086.1 Protein Homology CDS 1147819 1149120 . - 0 ID=cds-WP_023369943.1;Parent=gene-LIO31_RS05795;Dbxref=Genbank:WP_023369943.1;Name=WP_023369943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775160.1;locus_tag=LIO31_RS05795;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_023369943.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1149120 1149878 . - . ID=gene-LIO31_RS05800;Name=LIO31_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05800 NZ_CP085086.1 Protein Homology CDS 1149120 1149878 . - 0 ID=cds-WP_002940870.1;Parent=gene-LIO31_RS05800;Dbxref=Genbank:WP_002940870.1;Name=WP_002940870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775161.1;locus_tag=LIO31_RS05800;product=inositol monophosphatase family protein;protein_id=WP_002940870.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1149868 1150146 . - . ID=gene-LIO31_RS05805;Name=LIO31_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05805 NZ_CP085086.1 Protein Homology CDS 1149868 1150146 . - 0 ID=cds-WP_024383710.1;Parent=gene-LIO31_RS05805;Dbxref=Genbank:WP_024383710.1;Name=WP_024383710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286915.1;locus_tag=LIO31_RS05805;product=UPF0223 family protein;protein_id=WP_024383710.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1150161 1150562 . - . ID=gene-LIO31_RS05810;Name=LIO31_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05810 NZ_CP085086.1 Protein Homology CDS 1150161 1150562 . - 0 ID=cds-WP_009909989.1;Parent=gene-LIO31_RS05810;Dbxref=Genbank:WP_009909989.1;Name=WP_009909989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246303.1;locus_tag=LIO31_RS05810;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_009909989.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1150637 1151383 . - . ID=gene-LIO31_RS05815;Name=LIO31_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05815 NZ_CP085086.1 Protein Homology CDS 1150637 1151383 . - 0 ID=cds-WP_014637847.1;Parent=gene-LIO31_RS05815;Dbxref=Genbank:WP_014637847.1;Name=WP_014637847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775162.1;locus_tag=LIO31_RS05815;product=potassium channel family protein;protein_id=WP_014637847.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1151376 1152299 . - . ID=gene-LIO31_RS05820;Name=LIO31_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05820 NZ_CP085086.1 Protein Homology CDS 1151376 1152299 . - 0 ID=cds-WP_023369947.1;Parent=gene-LIO31_RS05820;Dbxref=Genbank:WP_023369947.1;Name=WP_023369947.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917251.1;locus_tag=LIO31_RS05820;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_023369947.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1152334 1153209 . - . ID=gene-LIO31_RS05825;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LIO31_RS05825 NZ_CP085086.1 Protein Homology CDS 1152334 1153209 . - 0 ID=cds-WP_032503491.1;Parent=gene-LIO31_RS05825;Dbxref=Genbank:WP_032503491.1;Name=WP_032503491.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590179.1;locus_tag=LIO31_RS05825;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_032503491.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1153262 1153471 . - . ID=gene-LIO31_RS05830;Name=LIO31_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05830 NZ_CP085086.1 Protein Homology CDS 1153262 1153471 . - 0 ID=cds-WP_023369951.1;Parent=gene-LIO31_RS05830;Dbxref=Genbank:WP_023369951.1;Name=WP_023369951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027091.1;locus_tag=LIO31_RS05830;product=hypothetical protein;protein_id=WP_023369951.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1153502 1154822 . - . ID=gene-LIO31_RS05835;Name=LIO31_RS05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS05835;pseudo=true NZ_CP085086.1 Protein Homology CDS 1153502 1154822 . - 0 ID=cds-LIO31_RS05835;Parent=gene-LIO31_RS05835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002312832.1;locus_tag=LIO31_RS05835;product=DUF438 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1154822 1155052 . - . ID=gene-LIO31_RS05840;Name=LIO31_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05840 NZ_CP085086.1 Protein Homology CDS 1154822 1155052 . - 0 ID=cds-WP_002937656.1;Parent=gene-LIO31_RS05840;Dbxref=Genbank:WP_002937656.1;Name=WP_002937656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646769.1;locus_tag=LIO31_RS05840;product=DUF1858 domain-containing protein;protein_id=WP_002937656.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1155065 1155559 . - . ID=gene-LIO31_RS05845;Name=LIO31_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05845 NZ_CP085086.1 Protein Homology CDS 1155065 1155559 . - 0 ID=cds-WP_074389639.1;Parent=gene-LIO31_RS05845;Dbxref=Genbank:WP_074389639.1;Name=WP_074389639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937658.1;locus_tag=LIO31_RS05845;product=GNAT family N-acetyltransferase;protein_id=WP_074389639.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1155561 1156815 . - . ID=gene-LIO31_RS05850;Name=LIO31_RS05850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS05850;pseudo=true NZ_CP085086.1 Protein Homology CDS 1155561 1156815 . - 0 ID=cds-LIO31_RS05850;Parent=gene-LIO31_RS05850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646767.1;locus_tag=LIO31_RS05850;product=DUF2130 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1156822 1157079 . - . ID=gene-LIO31_RS05855;Name=LIO31_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05855 NZ_CP085086.1 Protein Homology CDS 1156822 1157079 . - 0 ID=cds-WP_002940881.1;Parent=gene-LIO31_RS05855;Dbxref=Genbank:WP_002940881.1;Name=WP_002940881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937660.1;locus_tag=LIO31_RS05855;product=hypothetical protein;protein_id=WP_002940881.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1157097 1157567 . - . ID=gene-LIO31_RS05860;Name=LIO31_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05860 NZ_CP085086.1 Protein Homology CDS 1157097 1157567 . - 0 ID=cds-WP_012027098.1;Parent=gene-LIO31_RS05860;Dbxref=Genbank:WP_012027098.1;Name=WP_012027098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937661.1;locus_tag=LIO31_RS05860;product=ATPase;protein_id=WP_012027098.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1157949 1158764 . + . ID=gene-LIO31_RS05865;Name=LIO31_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05865 NZ_CP085086.1 Protein Homology CDS 1157949 1158764 . + 0 ID=cds-WP_024405797.1;Parent=gene-LIO31_RS05865;Dbxref=Genbank:WP_024405797.1;Name=WP_024405797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646765.1;locus_tag=LIO31_RS05865;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_024405797.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1158774 1159994 . + . ID=gene-LIO31_RS05870;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=LIO31_RS05870 NZ_CP085086.1 Protein Homology CDS 1158774 1159994 . + 0 ID=cds-WP_012027100.1;Parent=gene-LIO31_RS05870;Dbxref=Genbank:WP_012027100.1;Name=WP_012027100.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027100.1;locus_tag=LIO31_RS05870;product=peptidase T;protein_id=WP_012027100.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1160122 1160520 . + . ID=gene-LIO31_RS05875;Name=LIO31_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05875 NZ_CP085086.1 Protein Homology CDS 1160122 1160520 . + 0 ID=cds-WP_012028234.1;Parent=gene-LIO31_RS05875;Dbxref=Genbank:WP_012028234.1;Name=WP_012028234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937681.1;locus_tag=LIO31_RS05875;product=DUF5684 domain-containing protein;protein_id=WP_012028234.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1160556 1161470 . - . ID=gene-LIO31_RS05880;Name=LIO31_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05880 NZ_CP085086.1 Protein Homology CDS 1160556 1161470 . - 0 ID=cds-WP_012028235.1;Parent=gene-LIO31_RS05880;Dbxref=Genbank:WP_012028235.1;Name=WP_012028235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637837.1;locus_tag=LIO31_RS05880;product=transporter;protein_id=WP_012028235.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1161601 1161918 . + . ID=gene-LIO31_RS05885;Name=LIO31_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05885 NZ_CP085086.1 Protein Homology CDS 1161601 1161918 . + 0 ID=cds-WP_002940906.1;Parent=gene-LIO31_RS05885;Dbxref=Genbank:WP_002940906.1;Name=WP_002940906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937690.1;locus_tag=LIO31_RS05885;product=PadR family transcriptional regulator;protein_id=WP_002940906.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1161915 1163027 . + . ID=gene-LIO31_RS05890;Name=LIO31_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05890 NZ_CP085086.1 Protein Homology CDS 1161915 1163027 . + 0 ID=cds-WP_074389637.1;Parent=gene-LIO31_RS05890;Dbxref=Genbank:WP_074389637.1;Name=WP_074389637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730399.1;locus_tag=LIO31_RS05890;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_074389637.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1163039 1163617 . + . ID=gene-LIO31_RS05895;Name=LIO31_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05895 NZ_CP085086.1 Protein Homology CDS 1163039 1163617 . + 0 ID=cds-WP_012027104.1;Parent=gene-LIO31_RS05895;Dbxref=Genbank:WP_012027104.1;Name=WP_012027104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735772.1;locus_tag=LIO31_RS05895;product=DUF1700 domain-containing protein;protein_id=WP_012027104.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1163604 1164458 . + . ID=gene-LIO31_RS05900;Name=LIO31_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05900 NZ_CP085086.1 Protein Homology CDS 1163604 1164458 . + 0 ID=cds-WP_012775164.1;Parent=gene-LIO31_RS05900;Dbxref=Genbank:WP_012775164.1;Name=WP_012775164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917252.1;locus_tag=LIO31_RS05900;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_012775164.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1164495 1164854 . - . ID=gene-LIO31_RS05905;Name=LIO31_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05905 NZ_CP085086.1 Protein Homology CDS 1164495 1164854 . - 0 ID=cds-WP_012775165.1;Parent=gene-LIO31_RS05905;Dbxref=Genbank:WP_012775165.1;Name=WP_012775165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637833.1;locus_tag=LIO31_RS05905;product=DUF1304 domain-containing protein;protein_id=WP_012775165.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1164874 1165299 . - . ID=gene-LIO31_RS05910;Name=LIO31_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05910 NZ_CP085086.1 Protein Homology CDS 1164874 1165299 . - 0 ID=cds-WP_012027107.1;Parent=gene-LIO31_RS05910;Dbxref=Genbank:WP_012027107.1;Name=WP_012027107.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937706.1;locus_tag=LIO31_RS05910;product=MarR family transcriptional regulator;protein_id=WP_012027107.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1165461 1166219 . + . ID=gene-LIO31_RS05915;Name=LIO31_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05915 NZ_CP085086.1 Protein Homology CDS 1165461 1166219 . + 0 ID=cds-WP_012027108.1;Parent=gene-LIO31_RS05915;Dbxref=Genbank:WP_012027108.1;Name=WP_012027108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937708.1;locus_tag=LIO31_RS05915;product=threonine/serine exporter family protein;protein_id=WP_012027108.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1166223 1166675 . + . ID=gene-LIO31_RS05920;Name=LIO31_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05920 NZ_CP085086.1 Protein Homology CDS 1166223 1166675 . + 0 ID=cds-WP_012775166.1;Parent=gene-LIO31_RS05920;Dbxref=Genbank:WP_012775166.1;Name=WP_012775166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735768.1;locus_tag=LIO31_RS05920;product=threonine/serine exporter family protein;protein_id=WP_012775166.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1166732 1167970 . + . ID=gene-LIO31_RS05925;Name=LIO31_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05925 NZ_CP085086.1 Protein Homology CDS 1166732 1167970 . + 0 ID=cds-WP_024405794.1;Parent=gene-LIO31_RS05925;Dbxref=Genbank:WP_024405794.1;Name=WP_024405794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910001.1;locus_tag=LIO31_RS05925;product=cation diffusion facilitator family transporter;protein_id=WP_024405794.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1168253 1169563 . - . ID=gene-LIO31_RS05930;Name=LIO31_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05930 NZ_CP085086.1 Protein Homology CDS 1168253 1169563 . - 0 ID=cds-WP_024394154.1;Parent=gene-LIO31_RS05930;Dbxref=Genbank:WP_024394154.1;Name=WP_024394154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775168.1;locus_tag=LIO31_RS05930;product=GntP family permease;protein_id=WP_024394154.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1169614 1170102 . - . ID=gene-LIO31_RS05935;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LIO31_RS05935 NZ_CP085086.1 Protein Homology CDS 1169614 1170102 . - 0 ID=cds-WP_023369979.1;Parent=gene-LIO31_RS05935;Dbxref=Genbank:WP_023369979.1;Name=WP_023369979.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028243.1;locus_tag=LIO31_RS05935;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_023369979.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1170099 1170461 . - . ID=gene-LIO31_RS05940;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LIO31_RS05940 NZ_CP085086.1 Protein Homology CDS 1170099 1170461 . - 0 ID=cds-WP_012027113.1;Parent=gene-LIO31_RS05940;Dbxref=Genbank:WP_012027113.1;Name=WP_012027113.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735766.1;locus_tag=LIO31_RS05940;product=dihydroneopterin aldolase;protein_id=WP_012027113.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1170454 1171266 . - . ID=gene-LIO31_RS05945;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LIO31_RS05945 NZ_CP085086.1 Protein Homology CDS 1170454 1171266 . - 0 ID=cds-WP_002938084.1;Parent=gene-LIO31_RS05945;Dbxref=Genbank:WP_002938084.1;Name=WP_002938084.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938084.1;locus_tag=LIO31_RS05945;product=dihydropteroate synthase;protein_id=WP_002938084.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1171275 1171838 . - . ID=gene-LIO31_RS05950;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LIO31_RS05950 NZ_CP085086.1 Protein Homology CDS 1171275 1171838 . - 0 ID=cds-WP_002938082.1;Parent=gene-LIO31_RS05950;Dbxref=Genbank:WP_002938082.1;Name=WP_002938082.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938082.1;locus_tag=LIO31_RS05950;product=GTP cyclohydrolase I FolE;protein_id=WP_002938082.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1172005 1172487 . + . ID=gene-LIO31_RS05955;Name=LIO31_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05955 NZ_CP085086.1 Protein Homology CDS 1172005 1172487 . + 0 ID=cds-WP_024381385.1;Parent=gene-LIO31_RS05955;Dbxref=Genbank:WP_024381385.1;Name=WP_024381385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027114.1;locus_tag=LIO31_RS05955;product=8-oxo-dGTP diphosphatase;protein_id=WP_024381385.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1172536 1173213 . - . ID=gene-LIO31_RS05960;Name=LIO31_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05960 NZ_CP085086.1 Protein Homology CDS 1172536 1173213 . - 0 ID=cds-WP_002938079.1;Parent=gene-LIO31_RS05960;Dbxref=Genbank:WP_002938079.1;Name=WP_002938079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637824.1;locus_tag=LIO31_RS05960;product=DUF4956 domain-containing protein;protein_id=WP_002938079.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1173200 1173943 . - . ID=gene-LIO31_RS05965;Name=LIO31_RS05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS05965;pseudo=true NZ_CP085086.1 Protein Homology CDS 1173200 1173943 . - 0 ID=cds-LIO31_RS05965;Parent=gene-LIO31_RS05965;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735765.1;locus_tag=LIO31_RS05965;product=polyphosphate polymerase domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1174136 1174438 . + . ID=gene-LIO31_RS05970;Name=LIO31_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05970 NZ_CP085086.1 Protein Homology CDS 1174136 1174438 . + 0 ID=cds-WP_002938072.1;Parent=gene-LIO31_RS05970;Dbxref=Genbank:WP_002938072.1;Name=WP_002938072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938072.1;locus_tag=LIO31_RS05970;product=hypothetical protein;protein_id=WP_002938072.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1174459 1174725 . - . ID=gene-LIO31_RS05975;Name=LIO31_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05975 NZ_CP085086.1 Protein Homology CDS 1174459 1174725 . - 0 ID=cds-WP_012775169.1;Parent=gene-LIO31_RS05975;Dbxref=Genbank:WP_012775169.1;Name=WP_012775169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637821.1;locus_tag=LIO31_RS05975;product=DUF2087 domain-containing protein;protein_id=WP_012775169.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1174780 1177179 . - . ID=gene-LIO31_RS05980;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LIO31_RS05980 NZ_CP085086.1 Protein Homology CDS 1174780 1177179 . - 0 ID=cds-WP_012775584.1;Parent=gene-LIO31_RS05980;Dbxref=Genbank:WP_012775584.1;Name=WP_012775584.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897790.1;locus_tag=LIO31_RS05980;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_012775584.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1177181 1177702 . - . ID=gene-LIO31_RS05985;Name=LIO31_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05985 NZ_CP085086.1 Protein Homology CDS 1177181 1177702 . - 0 ID=cds-WP_012775170.1;Parent=gene-LIO31_RS05985;Dbxref=Genbank:WP_012775170.1;Name=WP_012775170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938061.1;locus_tag=LIO31_RS05985;product=GNAT family N-acetyltransferase;protein_id=WP_012775170.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1177904 1178947 . - . ID=gene-LIO31_RS05990;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LIO31_RS05990 NZ_CP085086.1 Protein Homology CDS 1177904 1178947 . - 0 ID=cds-WP_002938060.1;Parent=gene-LIO31_RS05990;Dbxref=Genbank:WP_002938060.1;Name=WP_002938060.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646750.1;locus_tag=LIO31_RS05990;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002938060.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1179403 1181127 . - . ID=gene-LIO31_RS05995;Name=LIO31_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS05995 NZ_CP085086.1 Protein Homology CDS 1179403 1181127 . - 0 ID=cds-WP_074389634.1;Parent=gene-LIO31_RS05995;Dbxref=Genbank:WP_074389634.1;Name=WP_074389634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137776.1;locus_tag=LIO31_RS05995;product=glycoside hydrolase family 3 protein;protein_id=WP_074389634.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1181138 1182928 . - . ID=gene-LIO31_RS06000;Name=LIO31_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06000 NZ_CP085086.1 Protein Homology CDS 1181138 1182928 . - 0 ID=cds-WP_024405793.1;Parent=gene-LIO31_RS06000;Dbxref=Genbank:WP_024405793.1;Name=WP_024405793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939767.1;locus_tag=LIO31_RS06000;product=beta-hexosaminidase;protein_id=WP_024405793.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1182977 1183777 . - . ID=gene-LIO31_RS06005;Name=LIO31_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06005 NZ_CP085086.1 Protein Homology CDS 1182977 1183777 . - 0 ID=cds-WP_024405792.1;Parent=gene-LIO31_RS06005;Dbxref=Genbank:WP_024405792.1;Name=WP_024405792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027122.1;locus_tag=LIO31_RS06005;product=HAD family hydrolase;protein_id=WP_024405792.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1183777 1184616 . - . ID=gene-LIO31_RS06010;Name=LIO31_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06010 NZ_CP085086.1 Protein Homology CDS 1183777 1184616 . - 0 ID=cds-WP_024405791.1;Parent=gene-LIO31_RS06010;Dbxref=Genbank:WP_024405791.1;Name=WP_024405791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000047575.1;locus_tag=LIO31_RS06010;product=SDR family oxidoreductase;protein_id=WP_024405791.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1184618 1185718 . - . ID=gene-LIO31_RS06015;Name=LIO31_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06015 NZ_CP085086.1 Protein Homology CDS 1184618 1185718 . - 0 ID=cds-WP_074392684.1;Parent=gene-LIO31_RS06015;Dbxref=Genbank:WP_074392684.1;Name=WP_074392684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939775.1;locus_tag=LIO31_RS06015;product=mannonate dehydratase;protein_id=WP_074392684.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1185732 1187132 . - . ID=gene-LIO31_RS06020;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=LIO31_RS06020 NZ_CP085086.1 Protein Homology CDS 1185732 1187132 . - 0 ID=cds-WP_024405789.1;Parent=gene-LIO31_RS06020;Dbxref=Genbank:WP_024405789.1;Name=WP_024405789.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775172.1;locus_tag=LIO31_RS06020;product=glucuronate isomerase;protein_id=WP_024405789.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1187122 1187754 . - . ID=gene-LIO31_RS06025;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LIO31_RS06025 NZ_CP085086.1 Protein Homology CDS 1187122 1187754 . - 0 ID=cds-WP_024403158.1;Parent=gene-LIO31_RS06025;Dbxref=Genbank:WP_024403158.1;Name=WP_024403158.1;Ontology_term=GO:0009084,GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=glutamine family amino acid biosynthetic process|0009084||IEA,Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938042.1;locus_tag=LIO31_RS06025;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_024403158.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1187877 1188593 . - . ID=gene-LIO31_RS06030;Name=LIO31_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06030 NZ_CP085086.1 Protein Homology CDS 1187877 1188593 . - 0 ID=cds-WP_002938037.1;Parent=gene-LIO31_RS06030;Dbxref=Genbank:WP_002938037.1;Name=WP_002938037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118301.1;locus_tag=LIO31_RS06030;product=FadR family transcriptional regulator;protein_id=WP_002938037.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1188639 1190438 . - . ID=gene-LIO31_RS06035;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=LIO31_RS06035 NZ_CP085086.1 Protein Homology CDS 1188639 1190438 . - 0 ID=cds-WP_074389631.1;Parent=gene-LIO31_RS06035;Dbxref=Genbank:WP_074389631.1;Name=WP_074389631.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636410.1;locus_tag=LIO31_RS06035;product=beta-glucuronidase;protein_id=WP_074389631.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1190454 1191482 . - . ID=gene-LIO31_RS06040;Name=LIO31_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06040 NZ_CP085086.1 Protein Homology CDS 1190454 1191482 . - 0 ID=cds-WP_074389065.1;Parent=gene-LIO31_RS06040;Dbxref=Genbank:WP_074389065.1;Name=WP_074389065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939788.1;locus_tag=LIO31_RS06040;product=sugar kinase;protein_id=WP_074389065.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1191538 1193091 . - . ID=gene-LIO31_RS06045;Name=LIO31_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06045 NZ_CP085086.1 Protein Homology CDS 1191538 1193091 . - 0 ID=cds-WP_024405786.1;Parent=gene-LIO31_RS06045;Dbxref=Genbank:WP_024405786.1;Name=WP_024405786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775176.1;locus_tag=LIO31_RS06045;product=MFS transporter;protein_id=WP_024405786.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1193278 1194117 . - . ID=gene-LIO31_RS06050;Name=LIO31_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06050 NZ_CP085086.1 Protein Homology CDS 1193278 1194117 . - 0 ID=cds-WP_012028260.1;Parent=gene-LIO31_RS06050;Dbxref=Genbank:WP_012028260.1;Name=WP_012028260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735752.1;locus_tag=LIO31_RS06050;product=DNA/RNA non-specific endonuclease;protein_id=WP_012028260.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1194147 1194338 . - . ID=gene-LIO31_RS06055;Name=LIO31_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06055 NZ_CP085086.1 Protein Homology CDS 1194147 1194338 . - 0 ID=cds-WP_012775177.1;Parent=gene-LIO31_RS06055;Dbxref=Genbank:WP_012775177.1;Name=WP_012775177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775177.1;locus_tag=LIO31_RS06055;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_012775177.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1194331 1195614 . - . ID=gene-LIO31_RS06060;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LIO31_RS06060 NZ_CP085086.1 Protein Homology CDS 1194331 1195614 . - 0 ID=cds-WP_074389630.1;Parent=gene-LIO31_RS06060;Dbxref=Genbank:WP_074389630.1;Name=WP_074389630.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637806.1;locus_tag=LIO31_RS06060;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_074389630.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1195638 1195862 . - . ID=gene-LIO31_RS06065;Name=LIO31_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06065 NZ_CP085086.1 Protein Homology CDS 1195638 1195862 . - 0 ID=cds-WP_012775178.1;Parent=gene-LIO31_RS06065;Dbxref=Genbank:WP_012775178.1;Name=WP_012775178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775178.1;locus_tag=LIO31_RS06065;product=DUF1146 family protein;protein_id=WP_012775178.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1195922 1196338 . - . ID=gene-LIO31_RS06070;Name=LIO31_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06070 NZ_CP085086.1 Protein Homology CDS 1195922 1196338 . - 0 ID=cds-WP_002936007.1;Parent=gene-LIO31_RS06070;Dbxref=Genbank:WP_002936007.1;Name=WP_002936007.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637038.1;locus_tag=LIO31_RS06070;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_002936007.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1196348 1197754 . - . ID=gene-LIO31_RS06075;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LIO31_RS06075 NZ_CP085086.1 Protein Homology CDS 1196348 1197754 . - 0 ID=cds-WP_002936008.1;Parent=gene-LIO31_RS06075;Dbxref=Genbank:WP_002936008.1;Name=WP_002936008.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=LIO31_RS06075;product=F0F1 ATP synthase subunit beta;protein_id=WP_002936008.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1197774 1198652 . - . ID=gene-LIO31_RS06080;Name=LIO31_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06080 NZ_CP085086.1 Protein Homology CDS 1197774 1198652 . - 0 ID=cds-WP_002936012.1;Parent=gene-LIO31_RS06080;Dbxref=Genbank:WP_002936012.1;Name=WP_002936012.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301235.1;locus_tag=LIO31_RS06080;product=F0F1 ATP synthase subunit gamma;protein_id=WP_002936012.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1198664 1200184 . - . ID=gene-LIO31_RS06085;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LIO31_RS06085 NZ_CP085086.1 Protein Homology CDS 1198664 1200184 . - 0 ID=cds-WP_032497571.1;Parent=gene-LIO31_RS06085;Dbxref=Genbank:WP_032497571.1;Name=WP_032497571.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011889023.1;locus_tag=LIO31_RS06085;product=F0F1 ATP synthase subunit alpha;protein_id=WP_032497571.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1200188 1200721 . - . ID=gene-LIO31_RS06090;Name=LIO31_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06090 NZ_CP085086.1 Protein Homology CDS 1200188 1200721 . - 0 ID=cds-WP_012027140.1;Parent=gene-LIO31_RS06090;Dbxref=Genbank:WP_012027140.1;Name=WP_012027140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027140.1;locus_tag=LIO31_RS06090;product=F0F1 ATP synthase subunit delta;protein_id=WP_012027140.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1200722 1201228 . - . ID=gene-LIO31_RS06095;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LIO31_RS06095 NZ_CP085086.1 Protein Homology CDS 1200722 1201228 . - 0 ID=cds-WP_002936017.1;Parent=gene-LIO31_RS06095;Dbxref=Genbank:WP_002936017.1;Name=WP_002936017.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936017.1;locus_tag=LIO31_RS06095;product=F0F1 ATP synthase subunit B;protein_id=WP_002936017.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1201246 1201962 . - . ID=gene-LIO31_RS06100;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LIO31_RS06100 NZ_CP085086.1 Protein Homology CDS 1201246 1201962 . - 0 ID=cds-WP_002936020.1;Parent=gene-LIO31_RS06100;Dbxref=Genbank:WP_002936020.1;Name=WP_002936020.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936020.1;locus_tag=LIO31_RS06100;product=F0F1 ATP synthase subunit A;protein_id=WP_002936020.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1201999 1202199 . - . ID=gene-LIO31_RS06105;Name=LIO31_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06105 NZ_CP085086.1 Protein Homology CDS 1201999 1202199 . - 0 ID=cds-WP_002936021.1;Parent=gene-LIO31_RS06105;Dbxref=Genbank:WP_002936021.1;Name=WP_002936021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936021.1;locus_tag=LIO31_RS06105;product=F0F1 ATP synthase subunit C;protein_id=WP_002936021.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1202336 1203379 . - . ID=gene-LIO31_RS06110;Name=LIO31_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06110 NZ_CP085086.1 Protein Homology CDS 1202336 1203379 . - 0 ID=cds-WP_002939803.1;Parent=gene-LIO31_RS06110;Dbxref=Genbank:WP_002939803.1;Name=WP_002939803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939803.1;locus_tag=LIO31_RS06110;product=diacylglycerol kinase family lipid kinase;protein_id=WP_002939803.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1203390 1205348 . - . ID=gene-LIO31_RS06115;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LIO31_RS06115 NZ_CP085086.1 Protein Homology CDS 1203390 1205348 . - 0 ID=cds-WP_024403163.1;Parent=gene-LIO31_RS06115;Dbxref=Genbank:WP_024403163.1;Name=WP_024403163.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011837172.1;locus_tag=LIO31_RS06115;product=NAD-dependent DNA ligase LigA;protein_id=WP_024403163.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1205471 1205617 . + . ID=gene-LIO31_RS06120;Name=LIO31_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06120 NZ_CP085086.1 Protein Homology CDS 1205471 1205617 . + 0 ID=cds-WP_012027144.1;Parent=gene-LIO31_RS06120;Dbxref=Genbank:WP_012027144.1;Name=WP_012027144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027144.1;locus_tag=LIO31_RS06120;product=SPJ_0845 family protein;protein_id=WP_012027144.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1205619 1206524 . + . ID=gene-LIO31_RS06125;Name=LIO31_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06125 NZ_CP085086.1 Protein Homology CDS 1205619 1206524 . + 0 ID=cds-WP_012027145.1;Parent=gene-LIO31_RS06125;Dbxref=Genbank:WP_012027145.1;Name=WP_012027145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027145.1;locus_tag=LIO31_RS06125;product=permease;protein_id=WP_012027145.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1206521 1207336 . + . ID=gene-LIO31_RS06130;Name=LIO31_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06130 NZ_CP085086.1 Protein Homology CDS 1206521 1207336 . + 0 ID=cds-WP_012027146.1;Parent=gene-LIO31_RS06130;Dbxref=Genbank:WP_012027146.1;Name=WP_012027146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617844.1;locus_tag=LIO31_RS06130;product=TIGR03943 family protein;protein_id=WP_012027146.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1207415 1208902 . + . ID=gene-LIO31_RS06135;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LIO31_RS06135 NZ_CP085086.1 Protein Homology CDS 1207415 1208902 . + 0 ID=cds-WP_012027147.1;Parent=gene-LIO31_RS06135;Dbxref=Genbank:WP_012027147.1;Name=WP_012027147.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096131.1;locus_tag=LIO31_RS06135;product=glucose-6-phosphate dehydrogenase;protein_id=WP_012027147.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1209102 1209776 . + . ID=gene-LIO31_RS06140;Name=LIO31_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06140 NZ_CP085086.1 Protein Homology CDS 1209102 1209776 . + 0 ID=cds-WP_012027148.1;Parent=gene-LIO31_RS06140;Dbxref=Genbank:WP_012027148.1;Name=WP_012027148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637800.1;locus_tag=LIO31_RS06140;product=DNA alkylation repair protein;protein_id=WP_012027148.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1209778 1210335 . + . ID=gene-LIO31_RS06145;Name=LIO31_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06145 NZ_CP085086.1 Protein Homology CDS 1209778 1210335 . + 0 ID=cds-WP_012027149.1;Parent=gene-LIO31_RS06145;Dbxref=Genbank:WP_012027149.1;Name=WP_012027149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646735.1;locus_tag=LIO31_RS06145;product=GNAT family N-acetyltransferase;protein_id=WP_012027149.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1210359 1211633 . - . ID=gene-LIO31_RS06150;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LIO31_RS06150 NZ_CP085086.1 Protein Homology CDS 1210359 1211633 . - 0 ID=cds-WP_012775180.1;Parent=gene-LIO31_RS06150;Dbxref=Genbank:WP_012775180.1;Name=WP_012775180.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004299108.1;locus_tag=LIO31_RS06150;product=signal recognition particle-docking protein FtsY;protein_id=WP_012775180.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1211635 1212447 . - . ID=gene-LIO31_RS06155;Name=LIO31_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06155 NZ_CP085086.1 Protein Homology CDS 1211635 1212447 . - 0 ID=cds-WP_074389629.1;Parent=gene-LIO31_RS06155;Dbxref=Genbank:WP_074389629.1;Name=WP_074389629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465979.1;locus_tag=LIO31_RS06155;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_074389629.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1212437 1213246 . - . ID=gene-LIO31_RS06160;Name=LIO31_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06160 NZ_CP085086.1 Protein Homology CDS 1212437 1213246 . - 0 ID=cds-WP_012027151.1;Parent=gene-LIO31_RS06160;Dbxref=Genbank:WP_012027151.1;Name=WP_012027151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027151.1;locus_tag=LIO31_RS06160;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_012027151.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1213243 1216776 . - . ID=gene-LIO31_RS06165;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LIO31_RS06165 NZ_CP085086.1 Protein Homology CDS 1213243 1216776 . - 0 ID=cds-WP_012775578.1;Parent=gene-LIO31_RS06165;Dbxref=Genbank:WP_012775578.1;Name=WP_012775578.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004299103.1;locus_tag=LIO31_RS06165;product=chromosome segregation protein SMC;protein_id=WP_012775578.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1216779 1217465 . - . ID=gene-LIO31_RS06170;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LIO31_RS06170 NZ_CP085086.1 Protein Homology CDS 1216779 1217465 . - 0 ID=cds-WP_012028264.1;Parent=gene-LIO31_RS06170;Dbxref=Genbank:WP_012028264.1;Name=WP_012028264.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636411.1;locus_tag=LIO31_RS06170;product=ribonuclease III;protein_id=WP_012028264.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1217654 1218643 . + . ID=gene-LIO31_RS06175;Name=LIO31_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06175 NZ_CP085086.1 Protein Homology CDS 1217654 1218643 . + 0 ID=cds-WP_012775577.1;Parent=gene-LIO31_RS06175;Dbxref=Genbank:WP_012775577.1;Name=WP_012775577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775577.1;locus_tag=LIO31_RS06175;product=membrane protein;protein_id=WP_012775577.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1218889 1219929 . - . ID=gene-LIO31_RS06180;Name=LIO31_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06180 NZ_CP085086.1 Protein Homology CDS 1218889 1219929 . - 0 ID=cds-WP_012775181.1;Parent=gene-LIO31_RS06180;Dbxref=Genbank:WP_012775181.1;Name=WP_012775181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910042.1;locus_tag=LIO31_RS06180;product=ArsR family transcriptional regulator;protein_id=WP_012775181.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1219941 1221212 . - . ID=gene-LIO31_RS06185;Name=LIO31_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06185 NZ_CP085086.1 Protein Homology CDS 1219941 1221212 . - 0 ID=cds-WP_012775182.1;Parent=gene-LIO31_RS06185;Dbxref=Genbank:WP_012775182.1;Name=WP_012775182.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775182.1;locus_tag=LIO31_RS06185;product=MFS transporter;protein_id=WP_012775182.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1221585 1222748 . - . ID=gene-LIO31_RS06190;Name=LIO31_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06190 NZ_CP085086.1 Protein Homology CDS 1221585 1222748 . - 0 ID=cds-WP_226960893.1-2;Parent=gene-LIO31_RS06190;Dbxref=Genbank:WP_226960893.1;Name=WP_226960893.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677391.1;locus_tag=LIO31_RS06190;product=IS30 family transposase;protein_id=WP_226960893.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1223031 1224518 . + . ID=gene-LIO31_RS06195;Name=LIO31_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06195 NZ_CP085086.1 Protein Homology CDS 1223031 1224518 . + 0 ID=cds-WP_002936048.1;Parent=gene-LIO31_RS06195;Dbxref=Genbank:WP_002936048.1;Name=WP_002936048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735734.1;locus_tag=LIO31_RS06195;product=DUF1846 domain-containing protein;protein_id=WP_002936048.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1224600 1226339 . - . ID=gene-LIO31_RS06200;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LIO31_RS06200 NZ_CP085086.1 Protein Homology CDS 1224600 1226339 . - 0 ID=cds-WP_074389758.1;Parent=gene-LIO31_RS06200;Dbxref=Genbank:WP_074389758.1;Name=WP_074389758.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294264.1;locus_tag=LIO31_RS06200;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_074389758.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1226344 1226607 . - . ID=gene-LIO31_RS06205;Name=LIO31_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06205 NZ_CP085086.1 Protein Homology CDS 1226344 1226607 . - 0 ID=cds-WP_002936050.1;Parent=gene-LIO31_RS06205;Dbxref=Genbank:WP_002936050.1;Name=WP_002936050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=LIO31_RS06205;product=phosphocarrier protein HPr;protein_id=WP_002936050.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1226763 1227944 . - . ID=gene-LIO31_RS06210;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LIO31_RS06210 NZ_CP085086.1 Protein Homology CDS 1226763 1227944 . - 0 ID=cds-WP_012027162.1;Parent=gene-LIO31_RS06210;Dbxref=Genbank:WP_012027162.1;Name=WP_012027162.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019804703.1;locus_tag=LIO31_RS06210;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_012027162.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1227947 1228123 . - . ID=gene-LIO31_RS06215;Name=LIO31_RS06215;end_range=1228123,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS06215;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1227947 1228123 . - 0 ID=cds-LIO31_RS06215;Parent=gene-LIO31_RS06215;Note=catalyzes the formation of citrate from acetyl-CoA and oxaloacetate%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1228123,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936052.1;locus_tag=LIO31_RS06215;partial=true;product=citrate synthase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1228120 1230606 . - . ID=gene-LIO31_RS06220;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=LIO31_RS06220;partial=true;pseudo=true;start_range=.,1228120 NZ_CP085086.1 Protein Homology CDS 1228120 1230606 . - 0 ID=cds-LIO31_RS06220;Parent=gene-LIO31_RS06220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960406.1;locus_tag=LIO31_RS06220;partial=true;product=aconitate hydratase AcnA;pseudo=true;start_range=.,1228120;transl_table=11 NZ_CP085086.1 RefSeq gene 1230993 1231211 . + . ID=gene-LIO31_RS06225;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=LIO31_RS06225 NZ_CP085086.1 Protein Homology CDS 1230993 1231211 . + 0 ID=cds-WP_004299071.1;Parent=gene-LIO31_RS06225;Dbxref=Genbank:WP_004299071.1;Name=WP_004299071.1;Ontology_term=GO:0097573;gbkey=CDS;gene=nrdH;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936054.1;locus_tag=LIO31_RS06225;product=glutaredoxin-like protein NrdH;protein_id=WP_004299071.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1231244 1233403 . + . ID=gene-LIO31_RS06230;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=LIO31_RS06230 NZ_CP085086.1 Protein Homology CDS 1231244 1233403 . + 0 ID=cds-WP_024405779.1;Parent=gene-LIO31_RS06230;Dbxref=Genbank:WP_024405779.1;Name=WP_024405779.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=LIO31_RS06230;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_024405779.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1233533 1234492 . + . ID=gene-LIO31_RS06235;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=LIO31_RS06235 NZ_CP085086.1 Protein Homology CDS 1233533 1234492 . + 0 ID=cds-WP_002936057.1;Parent=gene-LIO31_RS06235;Dbxref=Genbank:WP_002936057.1;Name=WP_002936057.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646719.1;locus_tag=LIO31_RS06235;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_002936057.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1234928 1235929 . - . ID=gene-LIO31_RS06240;Name=LIO31_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06240 NZ_CP085086.1 Protein Homology CDS 1234928 1235929 . - 0 ID=cds-WP_002936059.1;Parent=gene-LIO31_RS06240;Dbxref=Genbank:WP_002936059.1;Name=WP_002936059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000412458.1;locus_tag=LIO31_RS06240;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002936059.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1236025 1237926 . - . ID=gene-LIO31_RS06245;Name=LIO31_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06245 NZ_CP085086.1 Protein Homology CDS 1236025 1237926 . - 0 ID=cds-WP_074389759.1;Parent=gene-LIO31_RS06245;Dbxref=Genbank:WP_074389759.1;Name=WP_074389759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936062.1;locus_tag=LIO31_RS06245;product=alginate lyase family protein;protein_id=WP_074389759.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1238260 1241778 . - . ID=gene-LIO31_RS06250;Name=hylA;gbkey=Gene;gene=hylA;gene_biotype=protein_coding;locus_tag=LIO31_RS06250 NZ_CP085086.1 Protein Homology CDS 1238260 1241778 . - 0 ID=cds-WP_024405777.1;Parent=gene-LIO31_RS06250;Dbxref=Genbank:WP_024405777.1;Name=WP_024405777.1;gbkey=CDS;gene=hylA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936069.1;locus_tag=LIO31_RS06250;product=hyaluronate lyase;protein_id=WP_024405777.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1241875 1242183 . - . ID=gene-LIO31_RS06255;Name=LIO31_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06255 NZ_CP085086.1 Protein Homology CDS 1241875 1242183 . - 0 ID=cds-WP_012027175.1;Parent=gene-LIO31_RS06255;Dbxref=Genbank:WP_012027175.1;Name=WP_012027175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027175.1;locus_tag=LIO31_RS06255;product=preprotein translocase subunit YajC;protein_id=WP_012027175.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1242190 1243005 . - . ID=gene-LIO31_RS06260;Name=LIO31_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06260 NZ_CP085086.1 Protein Homology CDS 1242190 1243005 . - 0 ID=cds-WP_002936073.1;Parent=gene-LIO31_RS06260;Dbxref=Genbank:WP_002936073.1;Name=WP_002936073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148012.1;locus_tag=LIO31_RS06260;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_002936073.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1242992 1243768 . - . ID=gene-LIO31_RS06265;Name=LIO31_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06265 NZ_CP085086.1 Protein Homology CDS 1242992 1243768 . - 0 ID=cds-WP_002936077.1;Parent=gene-LIO31_RS06265;Dbxref=Genbank:WP_002936077.1;Name=WP_002936077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026606.1;locus_tag=LIO31_RS06265;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_002936077.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1243787 1244278 . - . ID=gene-LIO31_RS06270;Name=LIO31_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06270 NZ_CP085086.1 Protein Homology CDS 1243787 1244278 . - 0 ID=cds-WP_024381419.1;Parent=gene-LIO31_RS06270;Dbxref=Genbank:WP_024381419.1;Name=WP_024381419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178618.1;locus_tag=LIO31_RS06270;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_024381419.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1244288 1245478 . - . ID=gene-LIO31_RS06275;Name=LIO31_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06275 NZ_CP085086.1 Protein Homology CDS 1244288 1245478 . - 0 ID=cds-WP_012775184.1;Parent=gene-LIO31_RS06275;Dbxref=Genbank:WP_012775184.1;Name=WP_012775184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936082.1;locus_tag=LIO31_RS06275;product=glycoside hydrolase family 88 protein;protein_id=WP_012775184.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1245490 1245924 . - . ID=gene-LIO31_RS06280;Name=LIO31_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06280 NZ_CP085086.1 Protein Homology CDS 1245490 1245924 . - 0 ID=cds-WP_012027178.1;Parent=gene-LIO31_RS06280;Dbxref=Genbank:WP_012027178.1;Name=WP_012027178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027178.1;locus_tag=LIO31_RS06280;product=PTS sugar transporter subunit IIA;protein_id=WP_012027178.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1246211 1246852 . - . ID=gene-LIO31_RS06285;Name=LIO31_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06285 NZ_CP085086.1 Protein Homology CDS 1246211 1246852 . - 0 ID=cds-WP_012775185.1;Parent=gene-LIO31_RS06285;Dbxref=Genbank:WP_012775185.1;Name=WP_012775185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775185.1;locus_tag=LIO31_RS06285;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_012775185.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1246863 1247864 . - . ID=gene-LIO31_RS06290;Name=LIO31_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06290 NZ_CP085086.1 Protein Homology CDS 1246863 1247864 . - 0 ID=cds-WP_012775576.1;Parent=gene-LIO31_RS06290;Dbxref=Genbank:WP_012775576.1;Name=WP_012775576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027180.1;locus_tag=LIO31_RS06290;product=sugar kinase;protein_id=WP_012775576.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1247881 1248522 . - . ID=gene-LIO31_RS06295;Name=LIO31_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06295 NZ_CP085086.1 Protein Homology CDS 1247881 1248522 . - 0 ID=cds-WP_012028272.1;Parent=gene-LIO31_RS06295;Dbxref=Genbank:WP_012028272.1;Name=WP_012028272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028272.1;locus_tag=LIO31_RS06295;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_012028272.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1248573 1249388 . - . ID=gene-LIO31_RS06300;Name=LIO31_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06300 NZ_CP085086.1 Protein Homology CDS 1248573 1249388 . - 0 ID=cds-WP_012027182.1;Parent=gene-LIO31_RS06300;Dbxref=Genbank:WP_012027182.1;Name=WP_012027182.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735717.1;locus_tag=LIO31_RS06300;product=gluconate 5-dehydrogenase;protein_id=WP_012027182.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1250466 1250861 . - . ID=gene-LIO31_RS06305;Name=LIO31_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06305 NZ_CP085086.1 Protein Homology CDS 1250466 1250861 . - 0 ID=cds-WP_226315728.1;Parent=gene-LIO31_RS06305;Dbxref=Genbank:WP_226315728.1;Name=WP_226315728.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF014430.2;locus_tag=LIO31_RS06305;product=transposase;protein_id=WP_226315728.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1250792 1251550 . - . ID=gene-LIO31_RS06310;Name=LIO31_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06310 NZ_CP085086.1 Protein Homology CDS 1250792 1251550 . - 0 ID=cds-WP_023369845.1;Parent=gene-LIO31_RS06310;Dbxref=Genbank:WP_023369845.1;Name=WP_023369845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013698.2;locus_tag=LIO31_RS06310;product=IS110 family transposase;protein_id=WP_023369845.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1251659 1252333 . - . ID=gene-LIO31_RS06315;Name=LIO31_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06315 NZ_CP085086.1 Protein Homology CDS 1251659 1252333 . - 0 ID=cds-WP_023369843.1;Parent=gene-LIO31_RS06315;Dbxref=Genbank:WP_023369843.1;Name=WP_023369843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775574.1;locus_tag=LIO31_RS06315;product=CPBP family intramembrane metalloprotease;protein_id=WP_023369843.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1252343 1252660 . - . ID=gene-LIO31_RS06320;Name=LIO31_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06320 NZ_CP085086.1 Protein Homology CDS 1252343 1252660 . - 0 ID=cds-WP_002936096.1;Parent=gene-LIO31_RS06320;Dbxref=Genbank:WP_002936096.1;Name=WP_002936096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936096.1;locus_tag=LIO31_RS06320;product=hypothetical protein;protein_id=WP_002936096.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1252670 1253359 . - . ID=gene-LIO31_RS06325;Name=LIO31_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06325 NZ_CP085086.1 Protein Homology CDS 1252670 1253359 . - 0 ID=cds-WP_012775187.1;Parent=gene-LIO31_RS06325;Dbxref=Genbank:WP_012775187.1;Name=WP_012775187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637783.1;locus_tag=LIO31_RS06325;product=CPBP family intramembrane metalloprotease;protein_id=WP_012775187.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1253385 1253591 . - . ID=gene-LIO31_RS06330;Name=LIO31_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06330 NZ_CP085086.1 Protein Homology CDS 1253385 1253591 . - 0 ID=cds-WP_009910094.1;Parent=gene-LIO31_RS06330;Dbxref=Genbank:WP_009910094.1;Name=WP_009910094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910094.1;locus_tag=LIO31_RS06330;product=hypothetical protein;protein_id=WP_009910094.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1253613 1254371 . - . ID=gene-LIO31_RS06335;Name=LIO31_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06335 NZ_CP085086.1 Protein Homology CDS 1253613 1254371 . - 0 ID=cds-WP_013730414.1;Parent=gene-LIO31_RS06335;Dbxref=Genbank:WP_013730414.1;Name=WP_013730414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735713.1;locus_tag=LIO31_RS06335;product=DUF3169 family protein;protein_id=WP_013730414.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1254368 1254583 . - . ID=gene-LIO31_RS06340;Name=LIO31_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06340 NZ_CP085086.1 Protein Homology CDS 1254368 1254583 . - 0 ID=cds-WP_009910096.1;Parent=gene-LIO31_RS06340;Dbxref=Genbank:WP_009910096.1;Name=WP_009910096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028279.1;locus_tag=LIO31_RS06340;product=helix-turn-helix transcriptional regulator;protein_id=WP_009910096.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1254596 1255162 . - . ID=gene-LIO31_RS06345;Name=LIO31_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06345 NZ_CP085086.1 Protein Homology CDS 1254596 1255162 . - 0 ID=cds-WP_023369841.1;Parent=gene-LIO31_RS06345;Dbxref=Genbank:WP_023369841.1;Name=WP_023369841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028280.1;locus_tag=LIO31_RS06345;product=DUF3267 domain-containing protein;protein_id=WP_023369841.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1255348 1255572 . - . ID=gene-LIO31_RS06350;Name=LIO31_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06350 NZ_CP085086.1 Protein Homology CDS 1255348 1255572 . - 0 ID=cds-WP_012775188.1;Parent=gene-LIO31_RS06350;Dbxref=Genbank:WP_012775188.1;Name=WP_012775188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775188.1;locus_tag=LIO31_RS06350;product=hypothetical protein;protein_id=WP_012775188.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1255606 1255806 . - . ID=gene-LIO31_RS06355;Name=LIO31_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06355 NZ_CP085086.1 Protein Homology CDS 1255606 1255806 . - 0 ID=cds-WP_012775189.1;Parent=gene-LIO31_RS06355;Dbxref=Genbank:WP_012775189.1;Name=WP_012775189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775189.1;locus_tag=LIO31_RS06355;product=hypothetical protein;protein_id=WP_012775189.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1256015 1258633 . - . ID=gene-LIO31_RS06360;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LIO31_RS06360 NZ_CP085086.1 Protein Homology CDS 1256015 1258633 . - 0 ID=cds-WP_074389757.1;Parent=gene-LIO31_RS06360;Dbxref=Genbank:WP_074389757.1;Name=WP_074389757.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661542.1;locus_tag=LIO31_RS06360;product=alanine--tRNA ligase;protein_id=WP_074389757.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1259002 1259487 . - . ID=gene-LIO31_RS06365;Name=LIO31_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06365 NZ_CP085086.1 Protein Homology CDS 1259002 1259487 . - 0 ID=cds-WP_023369835.1;Parent=gene-LIO31_RS06365;Dbxref=Genbank:WP_023369835.1;Name=WP_023369835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735706.1;locus_tag=LIO31_RS06365;product=LURP-one-related family protein;protein_id=WP_023369835.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1259753 1260754 . - . ID=gene-LIO31_RS06370;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=LIO31_RS06370 NZ_CP085086.1 Protein Homology CDS 1259753 1260754 . - 0 ID=cds-WP_002938100.1;Parent=gene-LIO31_RS06370;Dbxref=Genbank:WP_002938100.1;Name=WP_002938100.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735705.1;locus_tag=LIO31_RS06370;product=peptidylprolyl isomerase PrsA;protein_id=WP_002938100.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1260815 1261534 . - . ID=gene-LIO31_RS06375;Name=LIO31_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06375 NZ_CP085086.1 Protein Homology CDS 1260815 1261534 . - 0 ID=cds-WP_009910106.1;Parent=gene-LIO31_RS06375;Dbxref=Genbank:WP_009910106.1;Name=WP_009910106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910106.1;locus_tag=LIO31_RS06375;product=O-methyltransferase;protein_id=WP_009910106.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1261609 1262157 . - . ID=gene-LIO31_RS06380;Name=LIO31_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06380 NZ_CP085086.1 Protein Homology CDS 1261609 1262157 . - 0 ID=cds-WP_002938103.1;Parent=gene-LIO31_RS06380;Dbxref=Genbank:WP_002938103.1;Name=WP_002938103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004299013.1;locus_tag=LIO31_RS06380;product=hypothetical protein;protein_id=WP_002938103.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1262173 1262613 . - . ID=gene-LIO31_RS06385;Name=LIO31_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06385 NZ_CP085086.1 Protein Homology CDS 1262173 1262613 . - 0 ID=cds-WP_012775191.1;Parent=gene-LIO31_RS06385;Dbxref=Genbank:WP_012775191.1;Name=WP_012775191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775191.1;locus_tag=LIO31_RS06385;product=hypothetical protein;protein_id=WP_012775191.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1262615 1264417 . - . ID=gene-LIO31_RS06390;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=LIO31_RS06390 NZ_CP085086.1 Protein Homology CDS 1262615 1264417 . - 0 ID=cds-WP_074389756.1;Parent=gene-LIO31_RS06390;Dbxref=Genbank:WP_074389756.1;Name=WP_074389756.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004299006.1;locus_tag=LIO31_RS06390;product=oligoendopeptidase F;protein_id=WP_074389756.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1264647 1265588 . - . ID=gene-LIO31_RS06395;Name=LIO31_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06395 NZ_CP085086.1 Protein Homology CDS 1264647 1265588 . - 0 ID=cds-WP_024405765.1;Parent=gene-LIO31_RS06395;Dbxref=Genbank:WP_024405765.1;Name=WP_024405765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027201.1;locus_tag=LIO31_RS06395;product=competence protein CoiA family protein;protein_id=WP_024405765.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1265649 1267652 . - . ID=gene-LIO31_RS06400;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LIO31_RS06400 NZ_CP085086.1 Protein Homology CDS 1265649 1267652 . - 0 ID=cds-WP_024405764.1;Parent=gene-LIO31_RS06400;Dbxref=Genbank:WP_024405764.1;Name=WP_024405764.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019313364.1;locus_tag=LIO31_RS06400;product=methionine--tRNA ligase;protein_id=WP_024405764.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1267809 1268402 . + . ID=gene-LIO31_RS06405;Name=LIO31_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06405 NZ_CP085086.1 Protein Homology CDS 1267809 1268402 . + 0 ID=cds-WP_024405763.1;Parent=gene-LIO31_RS06405;Dbxref=Genbank:WP_024405763.1;Name=WP_024405763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775192.1;locus_tag=LIO31_RS06405;product=DUF1361 domain-containing protein;protein_id=WP_024405763.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1268702 1269739 . + . ID=gene-LIO31_RS06410;Name=LIO31_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06410 NZ_CP085086.1 Protein Homology CDS 1268702 1269739 . + 0 ID=cds-WP_012027206.1;Parent=gene-LIO31_RS06410;Dbxref=Genbank:WP_012027206.1;Name=WP_012027206.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637762.1;locus_tag=LIO31_RS06410;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_012027206.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1269749 1270774 . + . ID=gene-LIO31_RS06415;Name=LIO31_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06415 NZ_CP085086.1 Protein Homology CDS 1269749 1270774 . + 0 ID=cds-WP_012027207.1;Parent=gene-LIO31_RS06415;Dbxref=Genbank:WP_012027207.1;Name=WP_012027207.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637761.1;locus_tag=LIO31_RS06415;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_012027207.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1270820 1271689 . + . ID=gene-LIO31_RS06420;Name=LIO31_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06420 NZ_CP085086.1 Protein Homology CDS 1270820 1271689 . + 0 ID=cds-WP_024405762.1;Parent=gene-LIO31_RS06420;Dbxref=Genbank:WP_024405762.1;Name=WP_024405762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735696.1;locus_tag=LIO31_RS06420;product=shikimate dehydrogenase;protein_id=WP_024405762.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1271702 1272769 . + . ID=gene-LIO31_RS06425;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LIO31_RS06425 NZ_CP085086.1 Protein Homology CDS 1271702 1272769 . + 0 ID=cds-WP_024405761.1;Parent=gene-LIO31_RS06425;Dbxref=Genbank:WP_024405761.1;Name=WP_024405761.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938125.1;locus_tag=LIO31_RS06425;product=3-dehydroquinate synthase;protein_id=WP_024405761.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1272974 1273774 . - . ID=gene-LIO31_RS06430;Name=LIO31_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06430 NZ_CP085086.1 Protein Homology CDS 1272974 1273774 . - 0 ID=cds-WP_024405760.1;Parent=gene-LIO31_RS06430;Dbxref=Genbank:WP_024405760.1;Name=WP_024405760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027210.1;locus_tag=LIO31_RS06430;product=ABC transporter ATP-binding protein;protein_id=WP_024405760.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1273784 1274677 . - . ID=gene-LIO31_RS06435;Name=LIO31_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06435 NZ_CP085086.1 Protein Homology CDS 1273784 1274677 . - 0 ID=cds-WP_024405759.1;Parent=gene-LIO31_RS06435;Dbxref=Genbank:WP_024405759.1;Name=WP_024405759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940642.1;locus_tag=LIO31_RS06435;product=ABC transporter permease;protein_id=WP_024405759.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1274732 1275706 . - . ID=gene-LIO31_RS06440;Name=LIO31_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06440 NZ_CP085086.1 Protein Homology CDS 1274732 1275706 . - 0 ID=cds-WP_074389755.1;Parent=gene-LIO31_RS06440;Dbxref=Genbank:WP_074389755.1;Name=WP_074389755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646692.1;locus_tag=LIO31_RS06440;product=ABC transporter substrate-binding protein;protein_id=WP_074389755.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1275730 1276689 . - . ID=gene-LIO31_RS06445;Name=LIO31_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06445 NZ_CP085086.1 Protein Homology CDS 1275730 1276689 . - 0 ID=cds-WP_024405757.1;Parent=gene-LIO31_RS06445;Dbxref=Genbank:WP_024405757.1;Name=WP_024405757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028292.1;locus_tag=LIO31_RS06445;product=ABC transporter substrate-binding protein;protein_id=WP_024405757.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1277415 1278416 . - . ID=gene-LIO31_RS06450;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=LIO31_RS06450 NZ_CP085086.1 Protein Homology CDS 1277415 1278416 . - 0 ID=cds-WP_024405756.1;Parent=gene-LIO31_RS06450;Dbxref=Genbank:WP_024405756.1;Name=WP_024405756.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735690.1;locus_tag=LIO31_RS06450;product=tagatose-bisphosphate aldolase;protein_id=WP_024405756.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1278439 1279584 . - . ID=gene-LIO31_RS06455;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LIO31_RS06455 NZ_CP085086.1 Protein Homology CDS 1278439 1279584 . - 0 ID=cds-WP_024381443.1;Parent=gene-LIO31_RS06455;Dbxref=Genbank:WP_024381443.1;Name=WP_024381443.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646690.1;locus_tag=LIO31_RS06455;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_024381443.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1279847 1280185 . - . ID=gene-LIO31_RS06460;Name=LIO31_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06460 NZ_CP085086.1 Protein Homology CDS 1279847 1280185 . - 0 ID=cds-WP_002938966.1;Parent=gene-LIO31_RS06460;Dbxref=Genbank:WP_002938966.1;Name=WP_002938966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938966.1;locus_tag=LIO31_RS06460;product=YlbF/YmcA family competence regulator;protein_id=WP_002938966.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1280195 1281298 . - . ID=gene-LIO31_RS06465;Name=LIO31_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06465 NZ_CP085086.1 Protein Homology CDS 1280195 1281298 . - 0 ID=cds-WP_024384372.1;Parent=gene-LIO31_RS06465;Dbxref=Genbank:WP_024384372.1;Name=WP_024384372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637754.1;locus_tag=LIO31_RS06465;product=prephenate dehydrogenase;protein_id=WP_024384372.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1281306 1282472 . - . ID=gene-LIO31_RS06470;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LIO31_RS06470 NZ_CP085086.1 Protein Homology CDS 1281306 1282472 . - 0 ID=cds-WP_004194717.1;Parent=gene-LIO31_RS06470;Dbxref=Genbank:WP_004194717.1;Name=WP_004194717.1;Ontology_term=GO:0009423,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002997861.1;locus_tag=LIO31_RS06470;product=chorismate synthase;protein_id=WP_004194717.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1282476 1283150 . - . ID=gene-LIO31_RS06475;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=LIO31_RS06475 NZ_CP085086.1 Protein Homology CDS 1282476 1283150 . - 0 ID=cds-WP_012027218.1;Parent=gene-LIO31_RS06475;Dbxref=Genbank:WP_012027218.1;Name=WP_012027218.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940621.1;locus_tag=LIO31_RS06475;product=type I 3-dehydroquinate dehydratase;protein_id=WP_012027218.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1283147 1284310 . - . ID=gene-LIO31_RS06480;Name=LIO31_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06480 NZ_CP085086.1 Protein Homology CDS 1283147 1284310 . - 0 ID=cds-WP_004194720.1;Parent=gene-LIO31_RS06480;Dbxref=Genbank:WP_004194720.1;Name=WP_004194720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194720.1;locus_tag=LIO31_RS06480;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_004194720.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1284426 1286606 . + . ID=gene-LIO31_RS06485;Name=LIO31_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06485 NZ_CP085086.1 Protein Homology CDS 1284426 1286606 . + 0 ID=cds-WP_012775195.1;Parent=gene-LIO31_RS06485;Dbxref=Genbank:WP_012775195.1;Name=WP_012775195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775195.1;locus_tag=LIO31_RS06485;product=LTA synthase family protein;protein_id=WP_012775195.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1286800 1289304 . - . ID=gene-LIO31_RS06490;Name=LIO31_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06490 NZ_CP085086.1 Protein Homology CDS 1286800 1289304 . - 0 ID=cds-WP_012775196.1;Parent=gene-LIO31_RS06490;Dbxref=Genbank:WP_012775196.1;Name=WP_012775196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735684.1;locus_tag=LIO31_RS06490;product=pneumococcal-type histidine triad protein;protein_id=WP_012775196.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1289630 1289989 . - . ID=gene-LIO31_RS06495;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LIO31_RS06495 NZ_CP085086.1 Protein Homology CDS 1289630 1289989 . - 0 ID=cds-WP_012028296.1;Parent=gene-LIO31_RS06495;Dbxref=Genbank:WP_012028296.1;Name=WP_012028296.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=LIO31_RS06495;product=50S ribosomal protein L20;protein_id=WP_012028296.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1290033 1290233 . - . ID=gene-LIO31_RS06500;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LIO31_RS06500 NZ_CP085086.1 Protein Homology CDS 1290033 1290233 . - 0 ID=cds-WP_012027223.1;Parent=gene-LIO31_RS06500;Dbxref=Genbank:WP_012027223.1;Name=WP_012027223.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002895038.1;locus_tag=LIO31_RS06500;product=50S ribosomal protein L35;protein_id=WP_012027223.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1290260 1290781 . - . ID=gene-LIO31_RS06505;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LIO31_RS06505 NZ_CP085086.1 Protein Homology CDS 1290260 1290781 . - 0 ID=cds-WP_032497583.1;Parent=gene-LIO31_RS06505;Dbxref=Genbank:WP_032497583.1;Name=WP_032497583.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012515489.1;locus_tag=LIO31_RS06505;product=translation initiation factor IF-3;protein_id=WP_032497583.1;transl_table=11 NZ_CP085086.1 cmsearch sequence_feature 1290807 1290935 . - . ID=id-NZ_CP085086.1:1290807..1290935;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085086.1 RefSeq gene 1290962 1291639 . - . ID=gene-LIO31_RS06510;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LIO31_RS06510 NZ_CP085086.1 Protein Homology CDS 1290962 1291639 . - 0 ID=cds-WP_002937055.1;Parent=gene-LIO31_RS06510;Dbxref=Genbank:WP_002937055.1;Name=WP_002937055.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775570.1;locus_tag=LIO31_RS06510;product=(d)CMP kinase;protein_id=WP_002937055.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1291649 1292125 . - . ID=gene-LIO31_RS06515;Name=LIO31_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06515 NZ_CP085086.1 Protein Homology CDS 1291649 1292125 . - 0 ID=cds-WP_024405755.1;Parent=gene-LIO31_RS06515;Dbxref=Genbank:WP_024405755.1;Name=WP_024405755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027224.1;locus_tag=LIO31_RS06515;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_024405755.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1292176 1292370 . + . ID=gene-LIO31_RS06520;Name=LIO31_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06520 NZ_CP085086.1 Protein Homology CDS 1292176 1292370 . + 0 ID=cds-WP_012775197.1;Parent=gene-LIO31_RS06520;Dbxref=Genbank:WP_012775197.1;Name=WP_012775197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910133.1;locus_tag=LIO31_RS06520;product=ferredoxin;protein_id=WP_012775197.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1292359 1292847 . - . ID=gene-LIO31_RS06525;Name=LIO31_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06525 NZ_CP085086.1 Protein Homology CDS 1292359 1292847 . - 0 ID=cds-WP_012027226.1;Parent=gene-LIO31_RS06525;Dbxref=Genbank:WP_012027226.1;Name=WP_012027226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735682.1;locus_tag=LIO31_RS06525;product=EbsA family protein;protein_id=WP_012027226.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1293030 1293800 . - . ID=gene-LIO31_RS06530;Name=LIO31_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06530 NZ_CP085086.1 Protein Homology CDS 1293030 1293800 . - 0 ID=cds-WP_012027227.1;Parent=gene-LIO31_RS06530;Dbxref=Genbank:WP_012027227.1;Name=WP_012027227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735681.1;locus_tag=LIO31_RS06530;product=glycosyltransferase;protein_id=WP_012027227.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1293790 1294146 . - . ID=gene-LIO31_RS06535;Name=LIO31_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06535 NZ_CP085086.1 Protein Homology CDS 1293790 1294146 . - 0 ID=cds-WP_002937073.1;Parent=gene-LIO31_RS06535;Dbxref=Genbank:WP_002937073.1;Name=WP_002937073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937073.1;locus_tag=LIO31_RS06535;product=DUF2304 domain-containing protein;protein_id=WP_002937073.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1294146 1294862 . - . ID=gene-LIO31_RS06540;Name=LIO31_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06540 NZ_CP085086.1 Protein Homology CDS 1294146 1294862 . - 0 ID=cds-WP_024382921.1;Parent=gene-LIO31_RS06540;Dbxref=Genbank:WP_024382921.1;Name=WP_024382921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604473.1;locus_tag=LIO31_RS06540;product=glycosyltransferase family 2 protein;protein_id=WP_024382921.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1294967 1296220 . - . ID=gene-LIO31_RS06545;Name=LIO31_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06545 NZ_CP085086.1 Protein Homology CDS 1294967 1296220 . - 0 ID=cds-WP_024405754.1;Parent=gene-LIO31_RS06545;Dbxref=Genbank:WP_024405754.1;Name=WP_024405754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637742.1;locus_tag=LIO31_RS06545;product=glycosyltransferase family 4 protein;protein_id=WP_024405754.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1296220 1298265 . - . ID=gene-LIO31_RS06550;Name=LIO31_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06550 NZ_CP085086.1 Protein Homology CDS 1296220 1298265 . - 0 ID=cds-WP_226319156.1;Parent=gene-LIO31_RS06550;Dbxref=Genbank:WP_226319156.1;Name=WP_226319156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937086.1;locus_tag=LIO31_RS06550;product=glycosyltransferase;protein_id=WP_226319156.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1298290 1299270 . - . ID=gene-LIO31_RS06555;Name=LIO31_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06555 NZ_CP085086.1 Protein Homology CDS 1298290 1299270 . - 0 ID=cds-WP_024405752.1;Parent=gene-LIO31_RS06555;Dbxref=Genbank:WP_024405752.1;Name=WP_024405752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027231.1;locus_tag=LIO31_RS06555;product=glycosyltransferase;protein_id=WP_024405752.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1299273 1300262 . - . ID=gene-LIO31_RS06560;Name=LIO31_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06560 NZ_CP085086.1 Protein Homology CDS 1299273 1300262 . - 0 ID=cds-WP_074389754.1;Parent=gene-LIO31_RS06560;Dbxref=Genbank:WP_074389754.1;Name=WP_074389754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735676.1;locus_tag=LIO31_RS06560;product=glycosyltransferase family 8 protein;protein_id=WP_074389754.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1300285 1301592 . - . ID=gene-LIO31_RS06565;Name=LIO31_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06565 NZ_CP085086.1 Protein Homology CDS 1300285 1301592 . - 0 ID=cds-WP_024405750.1;Parent=gene-LIO31_RS06565;Dbxref=Genbank:WP_024405750.1;Name=WP_024405750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775199.1;locus_tag=LIO31_RS06565;product=DUF2142 domain-containing protein;protein_id=WP_024405750.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1301589 1302848 . - . ID=gene-LIO31_RS06570;Name=LIO31_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06570 NZ_CP085086.1 Protein Homology CDS 1301589 1302848 . - 0 ID=cds-WP_024405749.1;Parent=gene-LIO31_RS06570;Dbxref=Genbank:WP_024405749.1;Name=WP_024405749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937095.1;locus_tag=LIO31_RS06570;product=lipopolysaccharide biosynthesis protein;protein_id=WP_024405749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1302881 1304644 . - . ID=gene-LIO31_RS06575;Name=LIO31_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06575 NZ_CP085086.1 Protein Homology CDS 1302881 1304644 . - 0 ID=cds-WP_226960404.1;Parent=gene-LIO31_RS06575;Dbxref=Genbank:WP_226960404.1;Name=WP_226960404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910147.1;locus_tag=LIO31_RS06575;product=rhamnan synthesis F family protein;protein_id=WP_226960404.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1304626 1305840 . - . ID=gene-LIO31_RS06580;Name=LIO31_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06580 NZ_CP085086.1 Protein Homology CDS 1304626 1305840 . - 0 ID=cds-WP_024405747.1;Parent=gene-LIO31_RS06580;Dbxref=Genbank:WP_024405747.1;Name=WP_024405747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937100.1;locus_tag=LIO31_RS06580;product=ABC transporter ATP-binding protein;protein_id=WP_024405747.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1305840 1306646 . - . ID=gene-LIO31_RS06585;Name=LIO31_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06585 NZ_CP085086.1 Protein Homology CDS 1305840 1306646 . - 0 ID=cds-WP_002937101.1;Parent=gene-LIO31_RS06585;Dbxref=Genbank:WP_002937101.1;Name=WP_002937101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937101.1;locus_tag=LIO31_RS06585;product=ABC transporter permease;protein_id=WP_002937101.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1306649 1307578 . - . ID=gene-LIO31_RS06590;Name=LIO31_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06590 NZ_CP085086.1 Protein Homology CDS 1306649 1307578 . - 0 ID=cds-WP_074389022.1;Parent=gene-LIO31_RS06590;Dbxref=Genbank:WP_074389022.1;Name=WP_074389022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933134.1;locus_tag=LIO31_RS06590;product=glycosyltransferase family 2 protein;protein_id=WP_074389022.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1307575 1308723 . - . ID=gene-LIO31_RS06595;Name=LIO31_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06595 NZ_CP085086.1 Protein Homology CDS 1307575 1308723 . - 0 ID=cds-WP_074389023.1;Parent=gene-LIO31_RS06595;Dbxref=Genbank:WP_074389023.1;Name=WP_074389023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937105.1;locus_tag=LIO31_RS06595;product=DUF1972 domain-containing protein;protein_id=WP_074389023.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1308937 1311486 . + . ID=gene-LIO31_RS06600;Name=LIO31_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06600 NZ_CP085086.1 Protein Homology CDS 1308937 1311486 . + 0 ID=cds-WP_024403170.1;Parent=gene-LIO31_RS06600;Dbxref=Genbank:WP_024403170.1;Name=WP_024403170.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937107.1;locus_tag=LIO31_RS06600;product=alkaline phosphatase family protein;protein_id=WP_024403170.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1311547 1311996 . - . ID=gene-LIO31_RS06605;Name=LIO31_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06605 NZ_CP085086.1 Protein Homology CDS 1311547 1311996 . - 0 ID=cds-WP_255304294.1;Parent=gene-LIO31_RS06605;Dbxref=Genbank:WP_255304294.1;Name=WP_255304294.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.2;locus_tag=LIO31_RS06605;product=glucosaminidase domain-containing protein;protein_id=WP_255304294.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1312053 1314830 . - . ID=gene-LIO31_RS06610;Name=LIO31_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06610 NZ_CP085086.1 Protein Homology CDS 1312053 1314830 . - 0 ID=cds-WP_226960405.1;Parent=gene-LIO31_RS06610;Dbxref=Genbank:WP_226960405.1;Name=WP_226960405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636035.1;locus_tag=LIO31_RS06610;product=GBS Bsp-like repeat-containing protein;protein_id=WP_226960405.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1314898 1315938 . - . ID=gene-LIO31_RS06615;Name=LIO31_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06615 NZ_CP085086.1 Protein Homology CDS 1314898 1315938 . - 0 ID=cds-WP_024405372.1;Parent=gene-LIO31_RS06615;Dbxref=Genbank:WP_024405372.1;Name=WP_024405372.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637729.1;locus_tag=LIO31_RS06615;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_024405372.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1315955 1316806 . - . ID=gene-LIO31_RS06620;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LIO31_RS06620 NZ_CP085086.1 Protein Homology CDS 1315955 1316806 . - 0 ID=cds-WP_024405373.1;Parent=gene-LIO31_RS06620;Dbxref=Genbank:WP_024405373.1;Name=WP_024405373.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019780653.1;locus_tag=LIO31_RS06620;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_024405373.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1316861 1317907 . - . ID=gene-LIO31_RS06625;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LIO31_RS06625 NZ_CP085086.1 Protein Homology CDS 1316861 1317907 . - 0 ID=cds-WP_002937117.1;Parent=gene-LIO31_RS06625;Dbxref=Genbank:WP_002937117.1;Name=WP_002937117.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884100.1;locus_tag=LIO31_RS06625;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_002937117.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1318096 1318581 . - . ID=gene-LIO31_RS06630;Name=LIO31_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06630 NZ_CP085086.1 Protein Homology CDS 1318096 1318581 . - 0 ID=cds-WP_002937118.1;Parent=gene-LIO31_RS06630;Dbxref=Genbank:WP_002937118.1;Name=WP_002937118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937118.1;locus_tag=LIO31_RS06630;product=hypothetical protein;protein_id=WP_002937118.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1318581 1319174 . - . ID=gene-LIO31_RS06635;Name=LIO31_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06635 NZ_CP085086.1 Protein Homology CDS 1318581 1319174 . - 0 ID=cds-WP_024405374.1;Parent=gene-LIO31_RS06635;Dbxref=Genbank:WP_024405374.1;Name=WP_024405374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018029578.1;locus_tag=LIO31_RS06635;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase family protein;protein_id=WP_024405374.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1319174 1320043 . - . ID=gene-LIO31_RS06640;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LIO31_RS06640 NZ_CP085086.1 Protein Homology CDS 1319174 1320043 . - 0 ID=cds-WP_002937121.1;Parent=gene-LIO31_RS06640;Dbxref=Genbank:WP_002937121.1;Name=WP_002937121.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276675.1;locus_tag=LIO31_RS06640;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_002937121.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1320141 1320965 . - . ID=gene-LIO31_RS06645;Name=LIO31_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06645 NZ_CP085086.1 Protein Homology CDS 1320141 1320965 . - 0 ID=cds-WP_024405376.1;Parent=gene-LIO31_RS06645;Dbxref=Genbank:WP_024405376.1;Name=WP_024405376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904720.1;locus_tag=LIO31_RS06645;product=ZIP family metal transporter;protein_id=WP_024405376.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1321141 1321935 . - . ID=gene-LIO31_RS06650;Name=LIO31_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06650 NZ_CP085086.1 Protein Homology CDS 1321141 1321935 . - 0 ID=cds-WP_023369775.1;Parent=gene-LIO31_RS06650;Dbxref=Genbank:WP_023369775.1;Name=WP_023369775.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881127.1;locus_tag=LIO31_RS06650;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_023369775.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1321925 1322608 . - . ID=gene-LIO31_RS06655;Name=LIO31_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06655 NZ_CP085086.1 Protein Homology CDS 1321925 1322608 . - 0 ID=cds-WP_226960894.1;Parent=gene-LIO31_RS06655;Dbxref=Genbank:WP_226960894.1;Name=WP_226960894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941360.1;locus_tag=LIO31_RS06655;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=WP_226960894.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1322610 1323284 . - . ID=gene-LIO31_RS06660;Name=LIO31_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06660 NZ_CP085086.1 Protein Homology CDS 1322610 1323284 . - 0 ID=cds-WP_014735657.1;Parent=gene-LIO31_RS06660;Dbxref=Genbank:WP_014735657.1;Name=WP_014735657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941367.1;locus_tag=LIO31_RS06660;product=DnaD domain-containing protein;protein_id=WP_014735657.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1323294 1324235 . - . ID=gene-LIO31_RS06665;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=LIO31_RS06665 NZ_CP085086.1 Protein Homology CDS 1323294 1324235 . - 0 ID=cds-WP_014637718.1;Parent=gene-LIO31_RS06665;Dbxref=Genbank:WP_014637718.1;Name=WP_014637718.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937134.1;locus_tag=LIO31_RS06665;product=homoserine O-succinyltransferase;protein_id=WP_014637718.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1324339 1324851 . - . ID=gene-LIO31_RS06670;Name=LIO31_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06670 NZ_CP085086.1 Protein Homology CDS 1324339 1324851 . - 0 ID=cds-WP_024382572.1;Parent=gene-LIO31_RS06670;Dbxref=Genbank:WP_024382572.1;Name=WP_024382572.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=LIO31_RS06670;product=adenine phosphoribosyltransferase;protein_id=WP_024382572.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1324866 1326032 . - . ID=gene-LIO31_RS06675;Name=LIO31_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06675 NZ_CP085086.1 Protein Homology CDS 1324866 1326032 . - 0 ID=cds-WP_024405377.1;Parent=gene-LIO31_RS06675;Dbxref=Genbank:WP_024405377.1;Name=WP_024405377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637717.1;locus_tag=LIO31_RS06675;product=DUF3114 domain-containing protein;protein_id=WP_024405377.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1326011 1328224 . - . ID=gene-LIO31_RS06680;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LIO31_RS06680 NZ_CP085086.1 Protein Homology CDS 1326011 1328224 . - 0 ID=cds-WP_074389028.1;Parent=gene-LIO31_RS06680;Dbxref=Genbank:WP_074389028.1;Name=WP_074389028.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937139.1;locus_tag=LIO31_RS06680;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_074389028.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1328381 1329928 . - . ID=gene-LIO31_RS06685;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LIO31_RS06685 NZ_CP085086.1 Protein Homology CDS 1328381 1329928 . - 0 ID=cds-WP_023369761.1;Parent=gene-LIO31_RS06685;Dbxref=Genbank:WP_023369761.1;Name=WP_023369761.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735652.1;locus_tag=LIO31_RS06685;product=cardiolipin synthase;protein_id=WP_023369761.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1330145 1333330 . + . ID=gene-LIO31_RS06690;Name=LIO31_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06690 NZ_CP085086.1 Protein Homology CDS 1330145 1333330 . + 0 ID=cds-WP_023369759.1;Parent=gene-LIO31_RS06690;Dbxref=Genbank:WP_023369759.1;Name=WP_023369759.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937143.1;locus_tag=LIO31_RS06690;product=M14 family zinc carboxypeptidase;protein_id=WP_023369759.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1333374 1334129 . - . ID=gene-LIO31_RS06695;Name=LIO31_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06695 NZ_CP085086.1 Protein Homology CDS 1333374 1334129 . - 0 ID=cds-WP_023369757.1;Parent=gene-LIO31_RS06695;Dbxref=Genbank:WP_023369757.1;Name=WP_023369757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637713.1;locus_tag=LIO31_RS06695;product=SDR family oxidoreductase;protein_id=WP_023369757.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1334126 1335055 . - . ID=gene-LIO31_RS06700;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=LIO31_RS06700 NZ_CP085086.1 Protein Homology CDS 1334126 1335055 . - 0 ID=cds-WP_023369755.1;Parent=gene-LIO31_RS06700;Dbxref=Genbank:WP_023369755.1;Name=WP_023369755.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354350.1;locus_tag=LIO31_RS06700;product=ribonuclease Z;protein_id=WP_023369755.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1335066 1335695 . - . ID=gene-LIO31_RS06705;Name=LIO31_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06705 NZ_CP085086.1 Protein Homology CDS 1335066 1335695 . - 0 ID=cds-WP_023369753.1;Parent=gene-LIO31_RS06705;Dbxref=Genbank:WP_023369753.1;Name=WP_023369753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637711.1;locus_tag=LIO31_RS06705;product=hypothetical protein;protein_id=WP_023369753.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1335679 1336929 . - . ID=gene-LIO31_RS06710;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LIO31_RS06710 NZ_CP085086.1 Protein Homology CDS 1335679 1336929 . - 0 ID=cds-WP_023369751.1;Parent=gene-LIO31_RS06710;Dbxref=Genbank:WP_023369751.1;Name=WP_023369751.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027262.1;locus_tag=LIO31_RS06710;product=GTPase HflX;protein_id=WP_023369751.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1336922 1337806 . - . ID=gene-LIO31_RS06715;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LIO31_RS06715 NZ_CP085086.1 Protein Homology CDS 1336922 1337806 . - 0 ID=cds-WP_023369749.1;Parent=gene-LIO31_RS06715;Dbxref=Genbank:WP_023369749.1;Name=WP_023369749.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028315.1;locus_tag=LIO31_RS06715;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_023369749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1337875 1338045 . + . ID=gene-LIO31_RS06720;Name=LIO31_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06720 NZ_CP085086.1 Protein Homology CDS 1337875 1338045 . + 0 ID=cds-WP_012775205.1;Parent=gene-LIO31_RS06720;Dbxref=Genbank:WP_012775205.1;Name=WP_012775205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002781.1;locus_tag=LIO31_RS06720;product=DUF3042 family protein;protein_id=WP_012775205.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1338145 1339311 . - . ID=gene-LIO31_RS06725;Name=LIO31_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06725 NZ_CP085086.1 Protein Homology CDS 1338145 1339311 . - 0 ID=cds-WP_023369747.1;Parent=gene-LIO31_RS06725;Dbxref=Genbank:WP_023369747.1;Name=WP_023369747.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730261.1;locus_tag=LIO31_RS06725;product=MFS transporter;protein_id=WP_023369747.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1339514 1340662 . + . ID=gene-LIO31_RS06730;Name=LIO31_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06730 NZ_CP085086.1 Protein Homology CDS 1339514 1340662 . + 0 ID=cds-WP_226960895.1;Parent=gene-LIO31_RS06730;Dbxref=Genbank:WP_226960895.1;Name=WP_226960895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027267.1;locus_tag=LIO31_RS06730;product=cobalamin-independent methionine synthase II family protein;protein_id=WP_226960895.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1341033 1341216 . - . ID=gene-LIO31_RS06735;Name=LIO31_RS06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS06735;partial=true;pseudo=true;start_range=.,1341033 NZ_CP085086.1 Protein Homology CDS 1341033 1341216 . - 0 ID=cds-LIO31_RS06735;Parent=gene-LIO31_RS06735;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002987985.1;locus_tag=LIO31_RS06735;partial=true;product=IS982 family transposase;pseudo=true;start_range=.,1341033;transl_table=11 NZ_CP085086.1 RefSeq gene 1341331 1342353 . - . ID=gene-LIO31_RS06740;Name=LIO31_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06740 NZ_CP085086.1 Protein Homology CDS 1341331 1342353 . - 0 ID=cds-WP_023369745.1;Parent=gene-LIO31_RS06740;Dbxref=Genbank:WP_023369745.1;Name=WP_023369745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735643.1;locus_tag=LIO31_RS06740;product=PhoH family protein;protein_id=WP_023369745.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1342432 1342647 . - . ID=gene-LIO31_RS06745;Name=LIO31_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06745 NZ_CP085086.1 Protein Homology CDS 1342432 1342647 . - 0 ID=cds-WP_023369743.1;Parent=gene-LIO31_RS06745;Dbxref=Genbank:WP_023369743.1;Name=WP_023369743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001232073.1;locus_tag=LIO31_RS06745;product=YozE family protein;protein_id=WP_023369743.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1342653 1343108 . - . ID=gene-LIO31_RS06750;Name=LIO31_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06750 NZ_CP085086.1 Protein Homology CDS 1342653 1343108 . - 0 ID=cds-WP_023369741.1;Parent=gene-LIO31_RS06750;Dbxref=Genbank:WP_023369741.1;Name=WP_023369741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646647.1;locus_tag=LIO31_RS06750;product=DUF1801 domain-containing protein;protein_id=WP_023369741.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1343118 1344038 . - . ID=gene-LIO31_RS06755;Name=LIO31_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06755 NZ_CP085086.1 Protein Homology CDS 1343118 1344038 . - 0 ID=cds-WP_023369740.1;Parent=gene-LIO31_RS06755;Dbxref=Genbank:WP_023369740.1;Name=WP_023369740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964166.1;locus_tag=LIO31_RS06755;product=2-dehydropantoate 2-reductase;protein_id=WP_023369740.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1344048 1344902 . - . ID=gene-LIO31_RS06760;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=LIO31_RS06760 NZ_CP085086.1 Protein Homology CDS 1344048 1344902 . - 0 ID=cds-WP_009910197.1;Parent=gene-LIO31_RS06760;Dbxref=Genbank:WP_009910197.1;Name=WP_009910197.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001095445.1;locus_tag=LIO31_RS06760;product=RNA-binding virulence regulatory protein CvfB;protein_id=WP_009910197.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1345034 1345591 . - . ID=gene-LIO31_RS06765;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LIO31_RS06765 NZ_CP085086.1 Protein Homology CDS 1345034 1345591 . - 0 ID=cds-WP_023369738.1;Parent=gene-LIO31_RS06765;Dbxref=Genbank:WP_023369738.1;Name=WP_023369738.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=LIO31_RS06765;product=ribosome recycling factor;protein_id=WP_023369738.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1345725 1346459 . - . ID=gene-LIO31_RS06770;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LIO31_RS06770 NZ_CP085086.1 Protein Homology CDS 1345725 1346459 . - 0 ID=cds-WP_015445263.1;Parent=gene-LIO31_RS06770;Dbxref=Genbank:WP_015445263.1;Name=WP_015445263.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445263.1;locus_tag=LIO31_RS06770;product=UMP kinase;protein_id=WP_015445263.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1346626 1348266 . - . ID=gene-LIO31_RS06775;Name=LIO31_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06775 NZ_CP085086.1 Protein Homology CDS 1346626 1348266 . - 0 ID=cds-WP_074389031.1;Parent=gene-LIO31_RS06775;Dbxref=Genbank:WP_074389031.1;Name=WP_074389031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636039.1;locus_tag=LIO31_RS06775;product=polysaccharide biosynthesis protein;protein_id=WP_074389031.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1348521 1349309 . - . ID=gene-LIO31_RS06780;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=LIO31_RS06780 NZ_CP085086.1 Protein Homology CDS 1348521 1349309 . - 0 ID=cds-WP_074389032.1;Parent=gene-LIO31_RS06780;Dbxref=Genbank:WP_074389032.1;Name=WP_074389032.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028317.1;locus_tag=LIO31_RS06780;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_074389032.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1349318 1349608 . - . ID=gene-LIO31_RS06785;Name=LIO31_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06785 NZ_CP085086.1 Protein Homology CDS 1349318 1349608 . - 0 ID=cds-WP_012775208.1;Parent=gene-LIO31_RS06785;Dbxref=Genbank:WP_012775208.1;Name=WP_012775208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775208.1;locus_tag=LIO31_RS06785;product=hypothetical protein;protein_id=WP_012775208.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1349713 1350402 . - . ID=gene-LIO31_RS06790;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LIO31_RS06790 NZ_CP085086.1 Protein Homology CDS 1349713 1350402 . - 0 ID=cds-WP_074389751.1;Parent=gene-LIO31_RS06790;Dbxref=Genbank:WP_074389751.1;Name=WP_074389751.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194879.1;locus_tag=LIO31_RS06790;product=50S ribosomal protein L1;protein_id=WP_074389751.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1350443 1350868 . - . ID=gene-LIO31_RS06795;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LIO31_RS06795 NZ_CP085086.1 Protein Homology CDS 1350443 1350868 . - 0 ID=cds-WP_002935890.1;Parent=gene-LIO31_RS06795;Dbxref=Genbank:WP_002935890.1;Name=WP_002935890.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004226069.1;locus_tag=LIO31_RS06795;product=50S ribosomal protein L11;protein_id=WP_002935890.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1351023 1351391 . + . ID=gene-LIO31_RS06800;Name=LIO31_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06800 NZ_CP085086.1 Protein Homology CDS 1351023 1351391 . + 0 ID=cds-WP_074389033.1;Parent=gene-LIO31_RS06800;Dbxref=Genbank:WP_074389033.1;Name=WP_074389033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194874.1;locus_tag=LIO31_RS06800;product=DUF3397 domain-containing protein;protein_id=WP_074389033.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1351760 1352146 . - . ID=gene-LIO31_RS06805;Name=LIO31_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06805 NZ_CP085086.1 Protein Homology CDS 1351760 1352146 . - 0 ID=cds-WP_009910215.1;Parent=gene-LIO31_RS06805;Dbxref=Genbank:WP_009910215.1;Name=WP_009910215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002931159.1;locus_tag=LIO31_RS06805;product=VOC family protein;protein_id=WP_009910215.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1352146 1354515 . - . ID=gene-LIO31_RS06810;Name=LIO31_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06810 NZ_CP085086.1 Protein Homology CDS 1352146 1354515 . - 0 ID=cds-WP_074389750.1;Parent=gene-LIO31_RS06810;Dbxref=Genbank:WP_074389750.1;Name=WP_074389750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027278.1;locus_tag=LIO31_RS06810;product=DNA translocase FtsK;protein_id=WP_074389750.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1354641 1355999 . - . ID=gene-LIO31_RS06815;Name=LIO31_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06815 NZ_CP085086.1 Protein Homology CDS 1354641 1355999 . - 0 ID=cds-WP_074389749.1;Parent=gene-LIO31_RS06815;Dbxref=Genbank:WP_074389749.1;Name=WP_074389749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028321.1;locus_tag=LIO31_RS06815;product=glycoside hydrolase family 32 protein;protein_id=WP_074389749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1356017 1357627 . - . ID=gene-LIO31_RS06820;Name=LIO31_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06820 NZ_CP085086.1 Protein Homology CDS 1356017 1357627 . - 0 ID=cds-WP_074389036.1;Parent=gene-LIO31_RS06820;Dbxref=Genbank:WP_074389036.1;Name=WP_074389036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775209.1;locus_tag=LIO31_RS06820;product=ABC transporter substrate-binding protein;protein_id=WP_074389036.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1357772 1358659 . - . ID=gene-LIO31_RS06825;Name=LIO31_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06825 NZ_CP085086.1 Protein Homology CDS 1357772 1358659 . - 0 ID=cds-WP_074389037.1;Parent=gene-LIO31_RS06825;Dbxref=Genbank:WP_074389037.1;Name=WP_074389037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646639.1;locus_tag=LIO31_RS06825;product=carbohydrate ABC transporter permease;protein_id=WP_074389037.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1358669 1359589 . - . ID=gene-LIO31_RS06830;Name=LIO31_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06830 NZ_CP085086.1 Protein Homology CDS 1358669 1359589 . - 0 ID=cds-WP_024399918.1;Parent=gene-LIO31_RS06830;Dbxref=Genbank:WP_024399918.1;Name=WP_024399918.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194862.1;locus_tag=LIO31_RS06830;product=ABC transporter permease subunit;protein_id=WP_024399918.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1359744 1360733 . - . ID=gene-LIO31_RS06835;Name=LIO31_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06835 NZ_CP085086.1 Protein Homology CDS 1359744 1360733 . - 0 ID=cds-WP_044678495.1;Parent=gene-LIO31_RS06835;Dbxref=Genbank:WP_044678495.1;Name=WP_044678495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194861.1;locus_tag=LIO31_RS06835;product=LacI family transcriptional regulator;protein_id=WP_044678495.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1360890 1361435 . - . ID=gene-LIO31_RS06840;Name=LIO31_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06840 NZ_CP085086.1 Protein Homology CDS 1360890 1361435 . - 0 ID=cds-WP_074389038.1;Parent=gene-LIO31_RS06840;Dbxref=Genbank:WP_074389038.1;Name=WP_074389038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730254.1;locus_tag=LIO31_RS06840;product=hypothetical protein;protein_id=WP_074389038.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1361436 1361813 . - . ID=gene-LIO31_RS06845;Name=LIO31_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06845 NZ_CP085086.1 Protein Homology CDS 1361436 1361813 . - 0 ID=cds-WP_002935876.1;Parent=gene-LIO31_RS06845;Dbxref=Genbank:WP_002935876.1;Name=WP_002935876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625774.1;locus_tag=LIO31_RS06845;product=glyoxalase/bleomycin resistance/extradiol dioxygenase family protein;protein_id=WP_002935876.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1361898 1362251 . - . ID=gene-LIO31_RS06850;Name=LIO31_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06850 NZ_CP085086.1 Protein Homology CDS 1361898 1362251 . - 0 ID=cds-WP_074389039.1;Parent=gene-LIO31_RS06850;Dbxref=Genbank:WP_074389039.1;Name=WP_074389039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935873.1;locus_tag=LIO31_RS06850;product=DUF2500 domain-containing protein;protein_id=WP_074389039.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1362394 1363197 . + . ID=gene-LIO31_RS06855;Name=LIO31_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06855 NZ_CP085086.1 Protein Homology CDS 1362394 1363197 . + 0 ID=cds-WP_012027287.1;Parent=gene-LIO31_RS06855;Dbxref=Genbank:WP_012027287.1;Name=WP_012027287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935869.1;locus_tag=LIO31_RS06855;product=peptidylprolyl isomerase;protein_id=WP_012027287.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1363326 1364582 . + . ID=gene-LIO31_RS06860;Name=LIO31_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06860 NZ_CP085086.1 Protein Homology CDS 1363326 1364582 . + 0 ID=cds-WP_226960406.1;Parent=gene-LIO31_RS06860;Dbxref=Genbank:WP_226960406.1;Name=WP_226960406.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677188.1;locus_tag=LIO31_RS06860;product=ISL3 family transposase;protein_id=WP_226960406.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1364880 1366424 . - . ID=gene-LIO31_RS06865;Name=LIO31_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06865 NZ_CP085086.1 Protein Homology CDS 1364880 1366424 . - 0 ID=cds-WP_024403372.1;Parent=gene-LIO31_RS06865;Dbxref=Genbank:WP_024403372.1;Name=WP_024403372.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=LIO31_RS06865;product=peptide chain release factor 3;protein_id=WP_024403372.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1366661 1368997 . + . ID=gene-LIO31_RS06870;Name=LIO31_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06870 NZ_CP085086.1 Protein Homology CDS 1366661 1368997 . + 0 ID=cds-WP_024405649.1;Parent=gene-LIO31_RS06870;Dbxref=Genbank:WP_024405649.1;Name=WP_024405649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298878.1;locus_tag=LIO31_RS06870;product=cation-translocating P-type ATPase;protein_id=WP_024405649.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1369028 1369726 . - . ID=gene-LIO31_RS06875;Name=LIO31_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06875 NZ_CP085086.1 Protein Homology CDS 1369028 1369726 . - 0 ID=cds-WP_024405650.1;Parent=gene-LIO31_RS06875;Dbxref=Genbank:WP_024405650.1;Name=WP_024405650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298877.1;locus_tag=LIO31_RS06875;product=TIGR02206 family membrane protein;protein_id=WP_024405650.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1369817 1371178 . - . ID=gene-LIO31_RS06880;Name=LIO31_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06880 NZ_CP085086.1 Protein Homology CDS 1369817 1371178 . - 0 ID=cds-WP_074389307.1;Parent=gene-LIO31_RS06880;Dbxref=Genbank:WP_074389307.1;Name=WP_074389307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735630.1;locus_tag=LIO31_RS06880;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_074389307.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1371307 1371687 . - . ID=gene-LIO31_RS06885;Name=LIO31_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06885 NZ_CP085086.1 Protein Homology CDS 1371307 1371687 . - 0 ID=cds-WP_023369702.1;Parent=gene-LIO31_RS06885;Dbxref=Genbank:WP_023369702.1;Name=WP_023369702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637684.1;locus_tag=LIO31_RS06885;product=OsmC family protein;protein_id=WP_023369702.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1371775 1372821 . - . ID=gene-LIO31_RS06890;Name=LIO31_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06890 NZ_CP085086.1 Protein Homology CDS 1371775 1372821 . - 0 ID=cds-WP_023369700.1;Parent=gene-LIO31_RS06890;Dbxref=Genbank:WP_023369700.1;Name=WP_023369700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935850.1;locus_tag=LIO31_RS06890;product=D-alanine--D-alanine ligase;protein_id=WP_023369700.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1372926 1373522 . - . ID=gene-LIO31_RS06895;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LIO31_RS06895 NZ_CP085086.1 Protein Homology CDS 1372926 1373522 . - 0 ID=cds-WP_002935848.1;Parent=gene-LIO31_RS06895;Dbxref=Genbank:WP_002935848.1;Name=WP_002935848.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=LIO31_RS06895;product=recombination mediator RecR;protein_id=WP_002935848.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1373531 1375606 . - . ID=gene-LIO31_RS06900;Name=pbp2b;gbkey=Gene;gene=pbp2b;gene_biotype=protein_coding;locus_tag=LIO31_RS06900 NZ_CP085086.1 Protein Homology CDS 1373531 1375606 . - 0 ID=cds-WP_024405652.1;Parent=gene-LIO31_RS06900;Dbxref=Genbank:WP_024405652.1;Name=WP_024405652.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2b;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775443.1;locus_tag=LIO31_RS06900;product=penicillin-binding protein PBP2B;protein_id=WP_024405652.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1375698 1376084 . - . ID=gene-LIO31_RS06905;Name=LIO31_RS06905;end_range=1376084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS06905;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1375698 1376084 . - 0 ID=cds-LIO31_RS06905;Parent=gene-LIO31_RS06905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=1376084,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LIO31_RS06905;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1376440 1377243 . - . ID=gene-LIO31_RS06910;Name=LIO31_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06910 NZ_CP085086.1 Protein Homology CDS 1376440 1377243 . - 0 ID=cds-WP_023369694.1;Parent=gene-LIO31_RS06910;Dbxref=Genbank:WP_023369694.1;Name=WP_023369694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016465920.1;locus_tag=LIO31_RS06910;product=MBL fold metallo-hydrolase;protein_id=WP_023369694.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1377250 1378599 . - . ID=gene-LIO31_RS06915;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=LIO31_RS06915 NZ_CP085086.1 Protein Homology CDS 1377250 1378599 . - 0 ID=cds-WP_024405653.1;Parent=gene-LIO31_RS06915;Dbxref=Genbank:WP_024405653.1;Name=WP_024405653.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298856.1;locus_tag=LIO31_RS06915;product=cell wall metabolism sensor histidine kinase VicK;protein_id=WP_024405653.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1378592 1379296 . - . ID=gene-LIO31_RS06920;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=LIO31_RS06920 NZ_CP085086.1 Protein Homology CDS 1378592 1379296 . - 0 ID=cds-WP_002935840.1;Parent=gene-LIO31_RS06920;Dbxref=Genbank:WP_002935840.1;Name=WP_002935840.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005589489.1;locus_tag=LIO31_RS06920;product=response regulator YycF;protein_id=WP_002935840.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1379490 1380251 . + . ID=gene-LIO31_RS06925;Name=LIO31_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06925 NZ_CP085086.1 Protein Homology CDS 1379490 1380251 . + 0 ID=cds-WP_002935839.1;Parent=gene-LIO31_RS06925;Dbxref=Genbank:WP_002935839.1;Name=WP_002935839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935839.1;locus_tag=LIO31_RS06925;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002935839.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1380262 1381101 . + . ID=gene-LIO31_RS06930;Name=LIO31_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06930 NZ_CP085086.1 Protein Homology CDS 1380262 1381101 . + 0 ID=cds-WP_023369690.1;Parent=gene-LIO31_RS06930;Dbxref=Genbank:WP_023369690.1;Name=WP_023369690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646622.1;locus_tag=LIO31_RS06930;product=transporter substrate-binding domain-containing protein;protein_id=WP_023369690.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1381116 1381814 . + . ID=gene-LIO31_RS06935;Name=LIO31_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06935 NZ_CP085086.1 Protein Homology CDS 1381116 1381814 . + 0 ID=cds-WP_015646621.1;Parent=gene-LIO31_RS06935;Dbxref=Genbank:WP_015646621.1;Name=WP_015646621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646621.1;locus_tag=LIO31_RS06935;product=amino acid ABC transporter permease;protein_id=WP_015646621.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1381829 1382488 . + . ID=gene-LIO31_RS06940;Name=LIO31_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06940 NZ_CP085086.1 Protein Homology CDS 1381829 1382488 . + 0 ID=cds-WP_002935828.1;Parent=gene-LIO31_RS06940;Dbxref=Genbank:WP_002935828.1;Name=WP_002935828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659320.1;locus_tag=LIO31_RS06940;product=amino acid ABC transporter permease;protein_id=WP_002935828.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1382560 1384512 . - . ID=gene-LIO31_RS06945;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LIO31_RS06945 NZ_CP085086.1 Protein Homology CDS 1382560 1384512 . - 0 ID=cds-WP_074389733.1;Parent=gene-LIO31_RS06945;Dbxref=Genbank:WP_074389733.1;Name=WP_074389733.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646620.1;locus_tag=LIO31_RS06945;product=threonine--tRNA ligase;protein_id=WP_074389733.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1384530 1384901 . - . ID=gene-LIO31_RS06950;Name=LIO31_RS06950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS06950;pseudo=true NZ_CP085086.1 Protein Homology CDS 1384530 1384901 . - 0 ID=cds-LIO31_RS06950;Parent=gene-LIO31_RS06950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646619.1;locus_tag=LIO31_RS06950;product=MazG-like protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1385164 1385538 . - . ID=gene-LIO31_RS06955;Name=LIO31_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06955 NZ_CP085086.1 Protein Homology CDS 1385164 1385538 . - 0 ID=cds-WP_013730246.1;Parent=gene-LIO31_RS06955;Dbxref=Genbank:WP_013730246.1;Name=WP_013730246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646618.1;locus_tag=LIO31_RS06955;product=hypothetical protein;protein_id=WP_013730246.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1385553 1386866 . - . ID=gene-LIO31_RS06960;Name=LIO31_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06960 NZ_CP085086.1 Protein Homology CDS 1385553 1386866 . - 0 ID=cds-WP_074389731.1;Parent=gene-LIO31_RS06960;Dbxref=Genbank:WP_074389731.1;Name=WP_074389731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735622.1;locus_tag=LIO31_RS06960;product=glycosyltransferase family 4 protein;protein_id=WP_074389731.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1386867 1387865 . - . ID=gene-LIO31_RS06965;Name=LIO31_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06965 NZ_CP085086.1 Protein Homology CDS 1386867 1387865 . - 0 ID=cds-WP_014637671.1;Parent=gene-LIO31_RS06965;Dbxref=Genbank:WP_014637671.1;Name=WP_014637671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192896.1;locus_tag=LIO31_RS06965;product=glycosyltransferase;protein_id=WP_014637671.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1388176 1390188 . + . ID=gene-LIO31_RS06970;Name=LIO31_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06970 NZ_CP085086.1 Protein Homology CDS 1388176 1390188 . + 0 ID=cds-WP_226960407.1;Parent=gene-LIO31_RS06970;Dbxref=Genbank:WP_226960407.1;Name=WP_226960407.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775559.1;locus_tag=LIO31_RS06970;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_226960407.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1390622 1391626 . - . ID=gene-LIO31_RS06975;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=LIO31_RS06975 NZ_CP085086.1 Protein Homology CDS 1390622 1391626 . - 0 ID=cds-WP_004298830.1;Parent=gene-LIO31_RS06975;Dbxref=Genbank:WP_004298830.1;Name=WP_004298830.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636430.1;locus_tag=LIO31_RS06975;product=catabolite control protein A;protein_id=WP_004298830.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1391836 1392921 . + . ID=gene-LIO31_RS06980;Name=LIO31_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06980 NZ_CP085086.1 Protein Homology CDS 1391836 1392921 . + 0 ID=cds-WP_226960896.1;Parent=gene-LIO31_RS06980;Dbxref=Genbank:WP_226960896.1;Name=WP_226960896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000040814.1;locus_tag=LIO31_RS06980;product=M24 family metallopeptidase;protein_id=WP_226960896.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1392960 1394102 . - . ID=gene-LIO31_RS06985;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LIO31_RS06985 NZ_CP085086.1 Protein Homology CDS 1392960 1394102 . - 0 ID=cds-WP_074389729.1;Parent=gene-LIO31_RS06985;Dbxref=Genbank:WP_074389729.1;Name=WP_074389729.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184131.1;locus_tag=LIO31_RS06985;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_074389729.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1394422 1395264 . + . ID=gene-LIO31_RS06990;Name=LIO31_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06990 NZ_CP085086.1 Protein Homology CDS 1394422 1395264 . + 0 ID=cds-WP_012027317.1;Parent=gene-LIO31_RS06990;Dbxref=Genbank:WP_012027317.1;Name=WP_012027317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646614.1;locus_tag=LIO31_RS06990;product=DUF975 family protein;protein_id=WP_012027317.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1395559 1395996 . - . ID=gene-LIO31_RS06995;Name=LIO31_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS06995 NZ_CP085086.1 Protein Homology CDS 1395559 1395996 . - 0 ID=cds-WP_012027318.1;Parent=gene-LIO31_RS06995;Dbxref=Genbank:WP_012027318.1;Name=WP_012027318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298822.1;locus_tag=LIO31_RS06995;product=CoA-binding protein;protein_id=WP_012027318.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1396117 1396872 . - . ID=gene-LIO31_RS07000;Name=LIO31_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07000 NZ_CP085086.1 Protein Homology CDS 1396117 1396872 . - 0 ID=cds-WP_226319170.1;Parent=gene-LIO31_RS07000;Dbxref=Genbank:WP_226319170.1;Name=WP_226319170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298821.1;locus_tag=LIO31_RS07000;product=glucose-6-phosphate isomerase;protein_id=WP_226319170.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1396886 1399522 . - . ID=gene-LIO31_RS07005;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LIO31_RS07005 NZ_CP085086.1 Protein Homology CDS 1396886 1399522 . - 0 ID=cds-WP_074389335.1;Parent=gene-LIO31_RS07005;Dbxref=Genbank:WP_074389335.1;Name=WP_074389335.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646612.1;locus_tag=LIO31_RS07005;product=DNA polymerase I;protein_id=WP_074389335.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1399598 1400905 . - . ID=gene-LIO31_RS07010;Name=LIO31_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07010 NZ_CP085086.1 Protein Homology CDS 1399598 1400905 . - 0 ID=cds-WP_014636651.1;Parent=gene-LIO31_RS07010;Dbxref=Genbank:WP_014636651.1;Name=WP_014636651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636651.1;locus_tag=LIO31_RS07010;product=hypothetical protein;protein_id=WP_014636651.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1401075 1404440 . - . ID=gene-LIO31_RS07015;Name=LIO31_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07015 NZ_CP085086.1 Protein Homology CDS 1401075 1404440 . - 0 ID=cds-WP_012775222.1;Parent=gene-LIO31_RS07015;Dbxref=Genbank:WP_012775222.1;Name=WP_012775222.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646610.1;locus_tag=LIO31_RS07015;product=FtsX-like permease family protein;protein_id=WP_012775222.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1404452 1405153 . - . ID=gene-LIO31_RS07020;Name=LIO31_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07020 NZ_CP085086.1 Protein Homology CDS 1404452 1405153 . - 0 ID=cds-WP_012027323.1;Parent=gene-LIO31_RS07020;Dbxref=Genbank:WP_012027323.1;Name=WP_012027323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027323.1;locus_tag=LIO31_RS07020;product=ABC transporter ATP-binding protein;protein_id=WP_012027323.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1405242 1405577 . - . ID=gene-LIO31_RS07025;Name=LIO31_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07025 NZ_CP085086.1 Protein Homology CDS 1405242 1405577 . - 0 ID=cds-WP_012775223.1;Parent=gene-LIO31_RS07025;Dbxref=Genbank:WP_012775223.1;Name=WP_012775223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935785.1;locus_tag=LIO31_RS07025;product=hypothetical protein;protein_id=WP_012775223.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1405672 1406157 . - . ID=gene-LIO31_RS07030;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LIO31_RS07030 NZ_CP085086.1 Protein Homology CDS 1405672 1406157 . - 0 ID=cds-WP_074389727.1;Parent=gene-LIO31_RS07030;Dbxref=Genbank:WP_074389727.1;Name=WP_074389727.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775224.1;locus_tag=LIO31_RS07030;product=thiol peroxidase;protein_id=WP_074389727.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1406236 1408686 . - . ID=gene-LIO31_RS07035;Name=LIO31_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07035 NZ_CP085086.1 Protein Homology CDS 1406236 1408686 . - 0 ID=cds-WP_226960897.1;Parent=gene-LIO31_RS07035;Dbxref=Genbank:WP_226960897.1;Name=WP_226960897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646606.1;locus_tag=LIO31_RS07035;product=heavy metal translocating P-type ATPase;protein_id=WP_226960897.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1409017 1410840 . - . ID=gene-LIO31_RS07040;Name=LIO31_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07040 NZ_CP085086.1 Protein Homology CDS 1409017 1410840 . - 0 ID=cds-WP_012028341.1;Parent=gene-LIO31_RS07040;Dbxref=Genbank:WP_012028341.1;Name=WP_012028341.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646605.1;locus_tag=LIO31_RS07040;product=C69 family dipeptidase;protein_id=WP_012028341.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1411034 1411894 . - . ID=gene-LIO31_RS07045;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=LIO31_RS07045 NZ_CP085086.1 Protein Homology CDS 1411034 1411894 . - 0 ID=cds-WP_012775226.1;Parent=gene-LIO31_RS07045;Dbxref=Genbank:WP_012775226.1;Name=WP_012775226.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935774.1;locus_tag=LIO31_RS07045;product=SAM-dependent methyltransferase TehB;protein_id=WP_012775226.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1412063 1413106 . + . ID=gene-LIO31_RS07050;Name=LIO31_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07050 NZ_CP085086.1 Protein Homology CDS 1412063 1413106 . + 0 ID=cds-WP_012775227.1;Parent=gene-LIO31_RS07050;Dbxref=Genbank:WP_012775227.1;Name=WP_012775227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775227.1;locus_tag=LIO31_RS07050;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_012775227.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1413193 1413660 . - . ID=gene-LIO31_RS07055;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LIO31_RS07055 NZ_CP085086.1 Protein Homology CDS 1413193 1413660 . - 0 ID=cds-WP_012027332.1;Parent=gene-LIO31_RS07055;Dbxref=Genbank:WP_012027332.1;Name=WP_012027332.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894882.1;locus_tag=LIO31_RS07055;product=SsrA-binding protein SmpB;protein_id=WP_012027332.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1413663 1416032 . - . ID=gene-LIO31_RS07060;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LIO31_RS07060 NZ_CP085086.1 Protein Homology CDS 1413663 1416032 . - 0 ID=cds-WP_074389725.1;Parent=gene-LIO31_RS07060;Dbxref=Genbank:WP_074389725.1;Name=WP_074389725.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298775.1;locus_tag=LIO31_RS07060;product=ribonuclease R;protein_id=WP_074389725.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1416464 1416697 . - . ID=gene-LIO31_RS07065;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LIO31_RS07065 NZ_CP085086.1 Protein Homology CDS 1416464 1416697 . - 0 ID=cds-WP_012027334.1;Parent=gene-LIO31_RS07065;Dbxref=Genbank:WP_012027334.1;Name=WP_012027334.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012000186.1;locus_tag=LIO31_RS07065;product=preprotein translocase subunit SecG;protein_id=WP_012027334.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1416744 1416893 . - . ID=gene-LIO31_RS07070;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LIO31_RS07070 NZ_CP085086.1 Protein Homology CDS 1416744 1416893 . - 0 ID=cds-WP_012775228.1;Parent=gene-LIO31_RS07070;Dbxref=Genbank:WP_012775228.1;Name=WP_012775228.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809064.1;locus_tag=LIO31_RS07070;product=50S ribosomal protein L33;protein_id=WP_012775228.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1416893 1418098 . - . ID=gene-LIO31_RS07075;Name=LIO31_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07075 NZ_CP085086.1 Protein Homology CDS 1416893 1418098 . - 0 ID=cds-WP_012028343.1;Parent=gene-LIO31_RS07075;Dbxref=Genbank:WP_012028343.1;Name=WP_012028343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028343.1;locus_tag=LIO31_RS07075;product=multidrug efflux MFS transporter;protein_id=WP_012028343.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1418085 1418687 . - . ID=gene-LIO31_RS07080;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LIO31_RS07080 NZ_CP085086.1 Protein Homology CDS 1418085 1418687 . - 0 ID=cds-WP_012027337.1;Parent=gene-LIO31_RS07080;Dbxref=Genbank:WP_012027337.1;Name=WP_012027337.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637643.1;locus_tag=LIO31_RS07080;product=dephospho-CoA kinase;protein_id=WP_012027337.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1418680 1419507 . - . ID=gene-LIO31_RS07085;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LIO31_RS07085 NZ_CP085086.1 Protein Homology CDS 1418680 1419507 . - 0 ID=cds-WP_012775229.1;Parent=gene-LIO31_RS07085;Dbxref=Genbank:WP_012775229.1;Name=WP_012775229.1;Ontology_term=GO:0006281,GO:0008534,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910298.1;locus_tag=LIO31_RS07085;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_012775229.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1420120 1421019 . - . ID=gene-LIO31_RS07090;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LIO31_RS07090 NZ_CP085086.1 Protein Homology CDS 1420120 1421019 . - 0 ID=cds-WP_002935752.1;Parent=gene-LIO31_RS07090;Dbxref=Genbank:WP_002935752.1;Name=WP_002935752.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935752.1;locus_tag=LIO31_RS07090;product=GTPase Era;protein_id=WP_002935752.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1421036 1421437 . - . ID=gene-LIO31_RS07095;Name=LIO31_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07095 NZ_CP085086.1 Protein Homology CDS 1421036 1421437 . - 0 ID=cds-WP_012027339.1;Parent=gene-LIO31_RS07095;Dbxref=Genbank:WP_012027339.1;Name=WP_012027339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298763.1;locus_tag=LIO31_RS07095;product=diacylglycerol kinase family protein;protein_id=WP_012027339.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1421418 1421915 . - . ID=gene-LIO31_RS07100;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LIO31_RS07100 NZ_CP085086.1 Protein Homology CDS 1421418 1421915 . - 0 ID=cds-WP_074389153.1;Parent=gene-LIO31_RS07100;Dbxref=Genbank:WP_074389153.1;Name=WP_074389153.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=LIO31_RS07100;product=rRNA maturation RNase YbeY;protein_id=WP_074389153.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1422015 1422827 . + . ID=gene-LIO31_RS07105;Name=LIO31_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07105 NZ_CP085086.1 Protein Homology CDS 1422015 1422827 . + 0 ID=cds-WP_002935747.1;Parent=gene-LIO31_RS07105;Dbxref=Genbank:WP_002935747.1;Name=WP_002935747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935747.1;locus_tag=LIO31_RS07105;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002935747.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1422931 1424439 . - . ID=gene-LIO31_RS07110;Name=LIO31_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07110 NZ_CP085086.1 Protein Homology CDS 1422931 1424439 . - 0 ID=cds-WP_012027342.1;Parent=gene-LIO31_RS07110;Dbxref=Genbank:WP_012027342.1;Name=WP_012027342.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298759.1;locus_tag=LIO31_RS07110;product=PTS transporter subunit EIIC;protein_id=WP_012027342.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1424467 1425168 . - . ID=gene-LIO31_RS07115;Name=LIO31_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07115 NZ_CP085086.1 Protein Homology CDS 1424467 1425168 . - 0 ID=cds-WP_024405662.1;Parent=gene-LIO31_RS07115;Dbxref=Genbank:WP_024405662.1;Name=WP_024405662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735599.1;locus_tag=LIO31_RS07115;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_024405662.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1425479 1426972 . - . ID=gene-LIO31_RS07120;Name=sly;gbkey=Gene;gene=sly;gene_biotype=protein_coding;locus_tag=LIO31_RS07120 NZ_CP085086.1 Protein Homology CDS 1425479 1426972 . - 0 ID=cds-WP_012027344.1;Parent=gene-LIO31_RS07120;Dbxref=Genbank:WP_012027344.1;Name=WP_012027344.1;gbkey=CDS;gene=sly;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027344.1;locus_tag=LIO31_RS07120;product=cholesterol-dependent cytolysin suilysin;protein_id=WP_012027344.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1427562 1428272 . - . ID=gene-LIO31_RS07125;Name=LIO31_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07125 NZ_CP085086.1 Protein Homology CDS 1427562 1428272 . - 0 ID=cds-WP_012027345.1;Parent=gene-LIO31_RS07125;Dbxref=Genbank:WP_012027345.1;Name=WP_012027345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027345.1;locus_tag=LIO31_RS07125;product=HAD family hydrolase;protein_id=WP_012027345.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1428326 1430065 . - . ID=gene-LIO31_RS07130;Name=LIO31_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07130 NZ_CP085086.1 Protein Homology CDS 1428326 1430065 . - 0 ID=cds-WP_012027346.1;Parent=gene-LIO31_RS07130;Dbxref=Genbank:WP_012027346.1;Name=WP_012027346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646585.1;locus_tag=LIO31_RS07130;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012027346.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1430065 1431792 . - . ID=gene-LIO31_RS07135;Name=LIO31_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07135 NZ_CP085086.1 Protein Homology CDS 1430065 1431792 . - 0 ID=cds-WP_012028347.1;Parent=gene-LIO31_RS07135;Dbxref=Genbank:WP_012028347.1;Name=WP_012028347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027347.1;locus_tag=LIO31_RS07135;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012028347.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1432262 1432334 . - . ID=gene-LIO31_RS07140;Name=LIO31_RS07140;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07140 NZ_CP085086.1 tRNAscan-SE tRNA 1432262 1432334 . - . ID=rna-LIO31_RS07140;Parent=gene-LIO31_RS07140;anticodon=(pos:complement(1432299..1432301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07140;product=tRNA-Thr NZ_CP085086.1 tRNAscan-SE exon 1432262 1432334 . - . ID=exon-LIO31_RS07140-1;Parent=rna-LIO31_RS07140;anticodon=(pos:complement(1432299..1432301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07140;product=tRNA-Thr NZ_CP085086.1 RefSeq gene 1432491 1432961 . + . ID=gene-LIO31_RS07145;Name=LIO31_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07145 NZ_CP085086.1 Protein Homology CDS 1432491 1432961 . + 0 ID=cds-WP_012775230.1;Parent=gene-LIO31_RS07145;Dbxref=Genbank:WP_012775230.1;Name=WP_012775230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936194.1;locus_tag=LIO31_RS07145;product=ferrous iron transport protein A;protein_id=WP_012775230.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1432958 1435102 . + . ID=gene-LIO31_RS07150;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LIO31_RS07150 NZ_CP085086.1 Protein Homology CDS 1432958 1435102 . + 0 ID=cds-WP_074389723.1;Parent=gene-LIO31_RS07150;Dbxref=Genbank:WP_074389723.1;Name=WP_074389723.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646582.1;locus_tag=LIO31_RS07150;product=ferrous iron transport protein B;protein_id=WP_074389723.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1435102 1435254 . + . ID=gene-LIO31_RS07155;Name=LIO31_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07155 NZ_CP085086.1 Protein Homology CDS 1435102 1435254 . + 0 ID=cds-WP_085461704.1;Parent=gene-LIO31_RS07155;Dbxref=Genbank:WP_085461704.1;Name=WP_085461704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298744.1;locus_tag=LIO31_RS07155;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_085461704.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1435307 1436236 . - . ID=gene-LIO31_RS07160;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LIO31_RS07160 NZ_CP085086.1 Protein Homology CDS 1435307 1436236 . - 0 ID=cds-WP_024383899.1;Parent=gene-LIO31_RS07160;Dbxref=Genbank:WP_024383899.1;Name=WP_024383899.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298742.1;locus_tag=LIO31_RS07160;product=permease-like cell division protein FtsX;protein_id=WP_024383899.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1436229 1436921 . - . ID=gene-LIO31_RS07165;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LIO31_RS07165 NZ_CP085086.1 Protein Homology CDS 1436229 1436921 . - 0 ID=cds-WP_014735589.1;Parent=gene-LIO31_RS07165;Dbxref=Genbank:WP_014735589.1;Name=WP_014735589.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012130521.1;locus_tag=LIO31_RS07165;product=cell division ATP-binding protein FtsE;protein_id=WP_014735589.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1437062 1438157 . - . ID=gene-LIO31_RS07170;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LIO31_RS07170 NZ_CP085086.1 Protein Homology CDS 1438086 1438157 . - 0 ID=cds-WP_105155068.1;Parent=gene-LIO31_RS07170;Dbxref=Genbank:WP_105155068.1;Name=WP_105155068.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775232.1;locus_tag=LIO31_RS07170;product=peptide chain release factor 2;protein_id=WP_105155068.1;transl_table=11 NZ_CP085086.1 Protein Homology CDS 1437062 1438084 . - 0 ID=cds-WP_105155068.1;Parent=gene-LIO31_RS07170;Dbxref=Genbank:WP_105155068.1;Name=WP_105155068.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775232.1;locus_tag=LIO31_RS07170;product=peptide chain release factor 2;protein_id=WP_105155068.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1438192 1439319 . - . ID=gene-LIO31_RS07175;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LIO31_RS07175 NZ_CP085086.1 Protein Homology CDS 1438192 1439319 . - 0 ID=cds-WP_024383901.1;Parent=gene-LIO31_RS07175;Dbxref=Genbank:WP_024383901.1;Name=WP_024383901.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636834.1;locus_tag=LIO31_RS07175;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_024383901.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1439360 1439848 . - . ID=gene-LIO31_RS07180;Name=LIO31_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07180 NZ_CP085086.1 Protein Homology CDS 1439360 1439848 . - 0 ID=cds-WP_015646579.1;Parent=gene-LIO31_RS07180;Dbxref=Genbank:WP_015646579.1;Name=WP_015646579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936187.1;locus_tag=LIO31_RS07180;product=VanZ family protein;protein_id=WP_015646579.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1440018 1440434 . - . ID=gene-LIO31_RS07185;Name=LIO31_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07185 NZ_CP085086.1 Protein Homology CDS 1440018 1440434 . - 0 ID=cds-WP_004298733.1;Parent=gene-LIO31_RS07185;Dbxref=Genbank:WP_004298733.1;Name=WP_004298733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298733.1;locus_tag=LIO31_RS07185;product=TM2 domain-containing protein;protein_id=WP_004298733.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1440568 1440768 . + . ID=gene-LIO31_RS07190;Name=LIO31_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07190 NZ_CP085086.1 Protein Homology CDS 1440568 1440768 . + 0 ID=cds-WP_014636456.1;Parent=gene-LIO31_RS07190;Dbxref=Genbank:WP_014636456.1;Name=WP_014636456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636456.1;locus_tag=LIO31_RS07190;product=hypothetical protein;protein_id=WP_014636456.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1440870 1441061 . + . ID=gene-LIO31_RS07195;Name=LIO31_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07195 NZ_CP085086.1 Protein Homology CDS 1440870 1441061 . + 0 ID=cds-WP_012027357.1;Parent=gene-LIO31_RS07195;Dbxref=Genbank:WP_012027357.1;Name=WP_012027357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636832.1;locus_tag=LIO31_RS07195;product=hypothetical protein;protein_id=WP_012027357.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1441177 1443864 . - . ID=gene-LIO31_RS07200;Name=LIO31_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07200 NZ_CP085086.1 Protein Homology CDS 1441177 1443864 . - 0 ID=cds-WP_023369626.1;Parent=gene-LIO31_RS07200;Dbxref=Genbank:WP_023369626.1;Name=WP_023369626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922034.1;locus_tag=LIO31_RS07200;product=cation-translocating P-type ATPase;protein_id=WP_023369626.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1444074 1444460 . - . ID=gene-LIO31_RS07205;Name=LIO31_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07205 NZ_CP085086.1 Protein Homology CDS 1444074 1444460 . - 0 ID=cds-WP_011922083.1;Parent=gene-LIO31_RS07205;Dbxref=Genbank:WP_011922083.1;Name=WP_011922083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936182.1;locus_tag=LIO31_RS07205;product=DUF1934 domain-containing protein;protein_id=WP_011922083.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1444472 1445359 . - . ID=gene-LIO31_RS07210;Name=LIO31_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07210 NZ_CP085086.1 Protein Homology CDS 1444472 1445359 . - 0 ID=cds-WP_014637620.1;Parent=gene-LIO31_RS07210;Dbxref=Genbank:WP_014637620.1;Name=WP_014637620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735582.1;locus_tag=LIO31_RS07210;product=sulfite exporter TauE/SafE family protein;protein_id=WP_014637620.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1445458 1446771 . + . ID=gene-LIO31_RS07215;Name=LIO31_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07215 NZ_CP085086.1 Protein Homology CDS 1445458 1446771 . + 0 ID=cds-WP_011922082.1;Parent=gene-LIO31_RS07215;Dbxref=Genbank:WP_011922082.1;Name=WP_011922082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936179.1;locus_tag=LIO31_RS07215;product=HD domain-containing protein;protein_id=WP_011922082.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1446761 1447570 . + . ID=gene-LIO31_RS07220;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=LIO31_RS07220 NZ_CP085086.1 Protein Homology CDS 1446761 1447570 . + 0 ID=cds-WP_024405665.1;Parent=gene-LIO31_RS07220;Dbxref=Genbank:WP_024405665.1;Name=WP_024405665.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604638.1;locus_tag=LIO31_RS07220;product=sugar-phosphatase;protein_id=WP_024405665.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1447786 1448538 . - . ID=gene-LIO31_RS07225;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LIO31_RS07225 NZ_CP085086.1 Protein Homology CDS 1447786 1448538 . - 0 ID=cds-WP_004298713.1;Parent=gene-LIO31_RS07225;Dbxref=Genbank:WP_004298713.1;Name=WP_004298713.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298713.1;locus_tag=LIO31_RS07225;product=triose-phosphate isomerase;protein_id=WP_004298713.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1448713 1449909 . - . ID=gene-LIO31_RS07230;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LIO31_RS07230 NZ_CP085086.1 Protein Homology CDS 1448713 1449909 . - 0 ID=cds-WP_012775011.1;Parent=gene-LIO31_RS07230;Dbxref=Genbank:WP_012775011.1;Name=WP_012775011.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=LIO31_RS07230;product=elongation factor Tu;protein_id=WP_012775011.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1450264 1451235 . - . ID=gene-LIO31_RS07235;Name=LIO31_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07235 NZ_CP085086.1 Protein Homology CDS 1450264 1451235 . - 0 ID=cds-WP_024405666.1;Parent=gene-LIO31_RS07235;Dbxref=Genbank:WP_024405666.1;Name=WP_024405666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909491.1;locus_tag=LIO31_RS07235;product=anti sigma factor C-terminal domain-containing protein;protein_id=WP_024405666.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1451216 1451719 . - . ID=gene-LIO31_RS07240;Name=LIO31_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07240 NZ_CP085086.1 Protein Homology CDS 1451216 1451719 . - 0 ID=cds-WP_044762630.1;Parent=gene-LIO31_RS07240;Dbxref=Genbank:WP_044762630.1;Name=WP_044762630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735578.1;locus_tag=LIO31_RS07240;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_044762630.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1451834 1454530 . - . ID=gene-LIO31_RS07245;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LIO31_RS07245 NZ_CP085086.1 Protein Homology CDS 1451834 1454530 . - 0 ID=cds-WP_023369616.1;Parent=gene-LIO31_RS07245;Dbxref=Genbank:WP_023369616.1;Name=WP_023369616.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058210.1;locus_tag=LIO31_RS07245;product=phosphoenolpyruvate carboxylase;protein_id=WP_023369616.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1454551 1455765 . - . ID=gene-LIO31_RS07250;Name=LIO31_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07250 NZ_CP085086.1 Protein Homology CDS 1454551 1455765 . - 0 ID=cds-WP_023369614.1;Parent=gene-LIO31_RS07250;Dbxref=Genbank:WP_023369614.1;Name=WP_023369614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940200.1;locus_tag=LIO31_RS07250;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_023369614.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1455902 1456267 . - . ID=gene-LIO31_RS07255;Name=LIO31_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07255 NZ_CP085086.1 Protein Homology CDS 1455902 1456267 . - 0 ID=cds-WP_011922709.1;Parent=gene-LIO31_RS07255;Dbxref=Genbank:WP_011922709.1;Name=WP_011922709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646570.1;locus_tag=LIO31_RS07255;product=DUF4430 domain-containing protein;protein_id=WP_011922709.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1456264 1456767 . - . ID=gene-LIO31_RS07260;Name=LIO31_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07260 NZ_CP085086.1 Protein Homology CDS 1456264 1456767 . - 0 ID=cds-WP_024382472.1;Parent=gene-LIO31_RS07260;Dbxref=Genbank:WP_024382472.1;Name=WP_024382472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917219.1;locus_tag=LIO31_RS07260;product=hypothetical protein;protein_id=WP_024382472.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1456880 1457734 . + . ID=gene-LIO31_RS07265;Name=LIO31_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07265 NZ_CP085086.1 Protein Homology CDS 1456880 1457734 . + 0 ID=cds-WP_011922073.1;Parent=gene-LIO31_RS07265;Dbxref=Genbank:WP_011922073.1;Name=WP_011922073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940188.1;locus_tag=LIO31_RS07265;product=glycoside hydrolase family 25 protein;protein_id=WP_011922073.1;transl_table=11 NZ_CP085086.1 cmsearch riboswitch 1457758 1457853 . + . ID=id-NZ_CP085086.1:1457758..1457853;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP085086.1 RefSeq gene 1457912 1458460 . + . ID=gene-LIO31_RS07270;Name=thiT;gbkey=Gene;gene=thiT;gene_biotype=protein_coding;locus_tag=LIO31_RS07270 NZ_CP085086.1 Protein Homology CDS 1457912 1458460 . + 0 ID=cds-WP_011922072.1;Parent=gene-LIO31_RS07270;Dbxref=Genbank:WP_011922072.1;Name=WP_011922072.1;Ontology_term=GO:0015888,GO:0015234;gbkey=CDS;gene=thiT;go_function=thiamine transmembrane transporter activity|0015234||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922072.1;locus_tag=LIO31_RS07270;product=energy-coupled thiamine transporter ThiT;protein_id=WP_011922072.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1458563 1459405 . + . ID=gene-LIO31_RS07275;Name=LIO31_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07275 NZ_CP085086.1 Protein Homology CDS 1458563 1459405 . + 0 ID=cds-WP_009909486.1;Parent=gene-LIO31_RS07275;Dbxref=Genbank:WP_009909486.1;Name=WP_009909486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940181.1;locus_tag=LIO31_RS07275;product=DUF368 domain-containing protein;protein_id=WP_009909486.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1459405 1459887 . + . ID=gene-LIO31_RS07280;Name=LIO31_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07280 NZ_CP085086.1 Protein Homology CDS 1459405 1459887 . + 0 ID=cds-WP_002938479.1;Parent=gene-LIO31_RS07280;Dbxref=Genbank:WP_002938479.1;Name=WP_002938479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646565.1;locus_tag=LIO31_RS07280;product=aminoacyl-tRNA deacylase;protein_id=WP_002938479.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1459890 1460516 . + . ID=gene-LIO31_RS07285;Name=LIO31_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07285 NZ_CP085086.1 Protein Homology CDS 1459890 1460516 . + 0 ID=cds-WP_002938482.1;Parent=gene-LIO31_RS07285;Dbxref=Genbank:WP_002938482.1;Name=WP_002938482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730229.1;locus_tag=LIO31_RS07285;product=histidine phosphatase family protein;protein_id=WP_002938482.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1460619 1462109 . + . ID=gene-LIO31_RS07290;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LIO31_RS07290 NZ_CP085086.1 Protein Homology CDS 1460619 1462109 . + 0 ID=cds-WP_024405668.1;Parent=gene-LIO31_RS07290;Dbxref=Genbank:WP_024405668.1;Name=WP_024405668.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730228.1;locus_tag=LIO31_RS07290;product=lysine--tRNA ligase;protein_id=WP_024405668.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1462382 1463447 . - . ID=gene-LIO31_RS07295;Name=LIO31_RS07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07295;pseudo=true NZ_CP085086.1 Protein Homology CDS 1462382 1463447 . - 0 ID=cds-LIO31_RS07295;Parent=gene-LIO31_RS07295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636829.1;locus_tag=LIO31_RS07295;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1463573 1464820 . - . ID=gene-LIO31_RS07300;Name=LIO31_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07300 NZ_CP085086.1 Protein Homology CDS 1463573 1464820 . - 0 ID=cds-WP_004194760.1;Parent=gene-LIO31_RS07300;Dbxref=Genbank:WP_004194760.1;Name=WP_004194760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194760.1;locus_tag=LIO31_RS07300;product=ABC transporter permease;protein_id=WP_004194760.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1464821 1465516 . - . ID=gene-LIO31_RS07305;Name=LIO31_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07305 NZ_CP085086.1 Protein Homology CDS 1464821 1465516 . - 0 ID=cds-WP_004194759.1;Parent=gene-LIO31_RS07305;Dbxref=Genbank:WP_004194759.1;Name=WP_004194759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194759.1;locus_tag=LIO31_RS07305;product=ABC transporter ATP-binding protein;protein_id=WP_004194759.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1465497 1466654 . - . ID=gene-LIO31_RS07310;Name=LIO31_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07310 NZ_CP085086.1 Protein Homology CDS 1465497 1466654 . - 0 ID=cds-WP_023369598.1;Parent=gene-LIO31_RS07310;Dbxref=Genbank:WP_023369598.1;Name=WP_023369598.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646559.1;locus_tag=LIO31_RS07310;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_023369598.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1466872 1468221 . + . ID=gene-LIO31_RS07315;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=LIO31_RS07315 NZ_CP085086.1 Protein Homology CDS 1466872 1468221 . + 0 ID=cds-WP_023369596.1;Parent=gene-LIO31_RS07315;Dbxref=Genbank:WP_023369596.1;Name=WP_023369596.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646558.1;locus_tag=LIO31_RS07315;product=glutathione-disulfide reductase;protein_id=WP_023369596.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1468271 1469008 . - . ID=gene-LIO31_RS07320;Name=LIO31_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07320 NZ_CP085086.1 Protein Homology CDS 1468271 1469008 . - 0 ID=cds-WP_226960898.1;Parent=gene-LIO31_RS07320;Dbxref=Genbank:WP_226960898.1;Name=WP_226960898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014713635.1;locus_tag=LIO31_RS07320;product=cyclase family protein;protein_id=WP_226960898.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1469214 1469753 . + . ID=gene-LIO31_RS07325;Name=LIO31_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07325 NZ_CP085086.1 Protein Homology CDS 1469214 1469753 . + 0 ID=cds-WP_011922059.1;Parent=gene-LIO31_RS07325;Dbxref=Genbank:WP_011922059.1;Name=WP_011922059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194750.1;locus_tag=LIO31_RS07325;product=biotin transporter BioY;protein_id=WP_011922059.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1469765 1469980 . - . ID=gene-LIO31_RS07330;Name=LIO31_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07330 NZ_CP085086.1 Protein Homology CDS 1469765 1469980 . - 0 ID=cds-WP_004194749.1;Parent=gene-LIO31_RS07330;Dbxref=Genbank:WP_004194749.1;Name=WP_004194749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018167072.1;locus_tag=LIO31_RS07330;product=YdbC family protein;protein_id=WP_004194749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1470072 1470395 . + . ID=gene-LIO31_RS07335;Name=LIO31_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07335 NZ_CP085086.1 Protein Homology CDS 1470072 1470395 . + 0 ID=cds-WP_011922058.1;Parent=gene-LIO31_RS07335;Dbxref=Genbank:WP_011922058.1;Name=WP_011922058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636828.1;locus_tag=LIO31_RS07335;product=hypothetical protein;protein_id=WP_011922058.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1470811 1472097 . - . ID=gene-LIO31_RS07340;Name=LIO31_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07340 NZ_CP085086.1 Protein Homology CDS 1470811 1472097 . - 0 ID=cds-WP_014917216.1;Parent=gene-LIO31_RS07340;Dbxref=Genbank:WP_014917216.1;Name=WP_014917216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015057417.1;locus_tag=LIO31_RS07340;product=U32 family peptidase;protein_id=WP_014917216.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1472275 1473204 . - . ID=gene-LIO31_RS07345;Name=LIO31_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07345 NZ_CP085086.1 Protein Homology CDS 1472275 1473204 . - 0 ID=cds-WP_074389722.1;Parent=gene-LIO31_RS07345;Dbxref=Genbank:WP_074389722.1;Name=WP_074389722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997850.1;locus_tag=LIO31_RS07345;product=U32 family peptidase;protein_id=WP_074389722.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1473365 1473676 . + . ID=gene-LIO31_RS07350;Name=LIO31_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07350 NZ_CP085086.1 Protein Homology CDS 1473365 1473676 . + 0 ID=cds-WP_012775004.1;Parent=gene-LIO31_RS07350;Dbxref=Genbank:WP_012775004.1;Name=WP_012775004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775004.1;locus_tag=LIO31_RS07350;product=DUF3270 domain-containing protein;protein_id=WP_012775004.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1473702 1474112 . - . ID=gene-LIO31_RS07355;Name=LIO31_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07355 NZ_CP085086.1 Protein Homology CDS 1473702 1474112 . - 0 ID=cds-WP_012775003.1;Parent=gene-LIO31_RS07355;Dbxref=Genbank:WP_012775003.1;Name=WP_012775003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775509.1;locus_tag=LIO31_RS07355;product=MerR family transcriptional regulator;protein_id=WP_012775003.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1474201 1474365 . - . ID=gene-LIO31_RS07360;Name=LIO31_RS07360;end_range=1474365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07360;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1474201 1474365 . - 0 ID=cds-LIO31_RS07360;Parent=gene-LIO31_RS07360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1474365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003104139.1;locus_tag=LIO31_RS07360;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1474495 1475322 . - . ID=gene-LIO31_RS07365;Name=LIO31_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07365 NZ_CP085086.1 Protein Homology CDS 1474495 1475322 . - 0 ID=cds-WP_012775002.1;Parent=gene-LIO31_RS07365;Dbxref=Genbank:WP_012775002.1;Name=WP_012775002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775002.1;locus_tag=LIO31_RS07365;product=class C sortase;protein_id=WP_012775002.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1475290 1475679 . + . ID=gene-LIO31_RS07370;Name=LIO31_RS07370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07370;partial=true;pseudo=true;start_range=.,1475290 NZ_CP085086.1 Protein Homology CDS 1475290 1475679 . + 0 ID=cds-LIO31_RS07370;Parent=gene-LIO31_RS07370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558050.1;locus_tag=LIO31_RS07370;partial=true;product=transposase;pseudo=true;start_range=.,1475290;transl_table=11 NZ_CP085086.1 RefSeq gene 1475680 1476066 . - . ID=gene-LIO31_RS07375;Name=LIO31_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07375 NZ_CP085086.1 Protein Homology CDS 1475680 1476066 . - 0 ID=cds-WP_011922052.1;Parent=gene-LIO31_RS07375;Dbxref=Genbank:WP_011922052.1;Name=WP_011922052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922052.1;locus_tag=LIO31_RS07375;product=hypothetical protein;protein_id=WP_011922052.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1476085 1476687 . - . ID=gene-LIO31_RS07380;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LIO31_RS07380 NZ_CP085086.1 Protein Homology CDS 1476085 1476687 . - 0 ID=cds-WP_014636242.1;Parent=gene-LIO31_RS07380;Dbxref=Genbank:WP_014636242.1;Name=WP_014636242.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909468.1;locus_tag=LIO31_RS07380;product=signal peptidase I;protein_id=WP_014636242.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1476677 1476970 . - . ID=gene-LIO31_RS07385;Name=LIO31_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07385 NZ_CP085086.1 Protein Homology CDS 1476677 1476970 . - 0 ID=cds-WP_002938694.1;Parent=gene-LIO31_RS07385;Dbxref=Genbank:WP_002938694.1;Name=WP_002938694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938694.1;locus_tag=LIO31_RS07385;product=hypothetical protein;protein_id=WP_002938694.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1478419 1479267 . - . ID=gene-LIO31_RS07390;Name=LIO31_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07390 NZ_CP085086.1 Protein Homology CDS 1478419 1479267 . - 0 ID=cds-WP_024405613.1;Parent=gene-LIO31_RS07390;Dbxref=Genbank:WP_024405613.1;Name=WP_024405613.1;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909467.1;locus_tag=LIO31_RS07390;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_024405613.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1479397 1480131 . - . ID=gene-LIO31_RS07395;Name=LIO31_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07395 NZ_CP085086.1 Protein Homology CDS 1479397 1480131 . - 0 ID=cds-WP_002943067.1;Parent=gene-LIO31_RS07395;Dbxref=Genbank:WP_002943067.1;Name=WP_002943067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019805208.1;locus_tag=LIO31_RS07395;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002943067.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1480124 1480813 . - . ID=gene-LIO31_RS07400;Name=LIO31_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07400 NZ_CP085086.1 Protein Homology CDS 1480124 1480813 . - 0 ID=cds-WP_002938702.1;Parent=gene-LIO31_RS07400;Dbxref=Genbank:WP_002938702.1;Name=WP_002938702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938702.1;locus_tag=LIO31_RS07400;product=amino acid ABC transporter permease;protein_id=WP_002938702.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1480939 1481169 . - . ID=gene-LIO31_RS07405;Name=LIO31_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07405 NZ_CP085086.1 Protein Homology CDS 1480939 1481169 . - 0 ID=cds-WP_002938704.1;Parent=gene-LIO31_RS07405;Dbxref=Genbank:WP_002938704.1;Name=WP_002938704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592360.1;locus_tag=LIO31_RS07405;product=DUF1797 family protein;protein_id=WP_002938704.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1481393 1483621 . + . ID=gene-LIO31_RS07410;Name=LIO31_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07410 NZ_CP085086.1 Protein Homology CDS 1481393 1483621 . + 0 ID=cds-WP_015646546.1;Parent=gene-LIO31_RS07410;Dbxref=Genbank:WP_015646546.1;Name=WP_015646546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922046.1;locus_tag=LIO31_RS07410;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_015646546.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1483807 1484268 . + . ID=gene-LIO31_RS07415;Name=LIO31_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07415 NZ_CP085086.1 Protein Homology CDS 1483807 1484268 . + 0 ID=cds-WP_226960899.1;Parent=gene-LIO31_RS07415;Dbxref=Genbank:WP_226960899.1;Name=WP_226960899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938708.1;locus_tag=LIO31_RS07415;product=NUDIX domain-containing protein;protein_id=WP_226960899.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1484323 1484631 . + . ID=gene-LIO31_RS07420;Name=LIO31_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07420 NZ_CP085086.1 Protein Homology CDS 1484323 1484631 . + 0 ID=cds-WP_002938710.1;Parent=gene-LIO31_RS07420;Dbxref=Genbank:WP_002938710.1;Name=WP_002938710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938710.1;locus_tag=LIO31_RS07420;product=DUF1827 family protein;protein_id=WP_002938710.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1485210 1486502 . + . ID=gene-LIO31_RS07425;Name=LIO31_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07425 NZ_CP085086.1 Protein Homology CDS 1485210 1486502 . + 0 ID=cds-WP_161945198.1;Parent=gene-LIO31_RS07425;Dbxref=Genbank:WP_161945198.1;Name=WP_161945198.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS07425;product=IS110 family transposase;protein_id=WP_161945198.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1486725 1489514 . - . ID=gene-LIO31_RS07430;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LIO31_RS07430 NZ_CP085086.1 Protein Homology CDS 1486725 1489514 . - 0 ID=cds-WP_024405615.1;Parent=gene-LIO31_RS07430;Dbxref=Genbank:WP_024405615.1;Name=WP_024405615.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165566.1;locus_tag=LIO31_RS07430;product=isoleucine--tRNA ligase;protein_id=WP_024405615.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1489525 1489968 . - . ID=gene-LIO31_RS07435;Name=LIO31_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07435 NZ_CP085086.1 Protein Homology CDS 1489525 1489968 . - 0 ID=cds-WP_024405616.1;Parent=gene-LIO31_RS07435;Dbxref=Genbank:WP_024405616.1;Name=WP_024405616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938828.1;locus_tag=LIO31_RS07435;product=GNAT family N-acetyltransferase;protein_id=WP_024405616.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1490199 1490888 . - . ID=gene-LIO31_RS07440;Name=LIO31_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07440 NZ_CP085086.1 Protein Homology CDS 1490199 1490888 . - 0 ID=cds-WP_011922043.1;Parent=gene-LIO31_RS07440;Dbxref=Genbank:WP_011922043.1;Name=WP_011922043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646542.1;locus_tag=LIO31_RS07440;product=DivIVA domain-containing protein;protein_id=WP_011922043.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1490897 1491688 . - . ID=gene-LIO31_RS07445;Name=LIO31_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07445 NZ_CP085086.1 Protein Homology CDS 1490897 1491688 . - 0 ID=cds-WP_074389050.1;Parent=gene-LIO31_RS07445;Dbxref=Genbank:WP_074389050.1;Name=WP_074389050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938812.1;locus_tag=LIO31_RS07445;product=YlmH/Sll1252 family protein;protein_id=WP_074389050.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1491691 1491954 . - . ID=gene-LIO31_RS07450;Name=LIO31_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07450 NZ_CP085086.1 Protein Homology CDS 1491691 1491954 . - 0 ID=cds-WP_011922041.1;Parent=gene-LIO31_RS07450;Dbxref=Genbank:WP_011922041.1;Name=WP_011922041.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735547.1;locus_tag=LIO31_RS07450;product=YggT family protein;protein_id=WP_011922041.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1491959 1492528 . - . ID=gene-LIO31_RS07455;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=protein_coding;locus_tag=LIO31_RS07455 NZ_CP085086.1 Protein Homology CDS 1491959 1492528 . - 0 ID=cds-WP_014637565.1;Parent=gene-LIO31_RS07455;Dbxref=Genbank:WP_014637565.1;Name=WP_014637565.1;Ontology_term=GO:0090529;gbkey=CDS;gene=sepF;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774998.1;locus_tag=LIO31_RS07455;product=cell division protein SepF;protein_id=WP_014637565.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1492545 1493216 . - . ID=gene-LIO31_RS07460;Name=LIO31_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07460 NZ_CP085086.1 Protein Homology CDS 1492545 1493216 . - 0 ID=cds-WP_024405618.1;Parent=gene-LIO31_RS07460;Dbxref=Genbank:WP_024405618.1;Name=WP_024405618.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646540.1;locus_tag=LIO31_RS07460;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_024405618.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1493223 1494452 . - . ID=gene-LIO31_RS07465;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LIO31_RS07465 NZ_CP085086.1 Protein Homology CDS 1493223 1494452 . - 0 ID=cds-WP_002943037.1;Parent=gene-LIO31_RS07465;Dbxref=Genbank:WP_002943037.1;Name=WP_002943037.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002263818.1;locus_tag=LIO31_RS07465;product=cell division protein FtsZ;protein_id=WP_002943037.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1494478 1495857 . - . ID=gene-LIO31_RS07470;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LIO31_RS07470 NZ_CP085086.1 Protein Homology CDS 1494478 1495857 . - 0 ID=cds-WP_012774997.1;Parent=gene-LIO31_RS07470;Dbxref=Genbank:WP_012774997.1;Name=WP_012774997.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943036.1;locus_tag=LIO31_RS07470;product=cell division protein FtsA;protein_id=WP_012774997.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1496010 1497092 . - . ID=gene-LIO31_RS07475;Name=LIO31_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07475 NZ_CP085086.1 Protein Homology CDS 1496010 1497092 . - 0 ID=cds-WP_024405620.1;Parent=gene-LIO31_RS07475;Dbxref=Genbank:WP_024405620.1;Name=WP_024405620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943031.1;locus_tag=LIO31_RS07475;product=FtsQ-type POTRA domain-containing protein;protein_id=WP_024405620.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1497098 1498162 . - . ID=gene-LIO31_RS07480;Name=LIO31_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07480 NZ_CP085086.1 Protein Homology CDS 1497098 1498162 . - 0 ID=cds-WP_032500924.1;Parent=gene-LIO31_RS07480;Dbxref=Genbank:WP_032500924.1;Name=WP_032500924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637561.1;locus_tag=LIO31_RS07480;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_032500924.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1498165 1499514 . - . ID=gene-LIO31_RS07485;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LIO31_RS07485 NZ_CP085086.1 Protein Homology CDS 1498165 1499514 . - 0 ID=cds-WP_024417611.1;Parent=gene-LIO31_RS07485;Dbxref=Genbank:WP_024417611.1;Name=WP_024417611.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735540.1;locus_tag=LIO31_RS07485;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_024417611.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1499612 1499902 . - . ID=gene-LIO31_RS07490;Name=LIO31_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07490 NZ_CP085086.1 Protein Homology CDS 1499612 1499902 . - 0 ID=cds-WP_024405623.1;Parent=gene-LIO31_RS07490;Dbxref=Genbank:WP_024405623.1;Name=WP_024405623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943024.1;locus_tag=LIO31_RS07490;product=DUF3165 family protein;protein_id=WP_024405623.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1499920 1501767 . - . ID=gene-LIO31_RS07495;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LIO31_RS07495 NZ_CP085086.1 Protein Homology CDS 1499920 1501767 . - 0 ID=cds-WP_009909450.1;Parent=gene-LIO31_RS07495;Dbxref=Genbank:WP_009909450.1;Name=WP_009909450.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943010.1;locus_tag=LIO31_RS07495;product=translational GTPase TypA;protein_id=WP_009909450.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1501900 1502892 . - . ID=gene-LIO31_RS07500;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=LIO31_RS07500 NZ_CP085086.1 Protein Homology CDS 1501900 1502892 . - 0 ID=cds-WP_011922684.1;Parent=gene-LIO31_RS07500;Dbxref=Genbank:WP_011922684.1;Name=WP_011922684.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016502595.1;locus_tag=LIO31_RS07500;product=aspartate--ammonia ligase;protein_id=WP_011922684.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1502976 1504034 . - . ID=gene-LIO31_RS07505;Name=LIO31_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07505 NZ_CP085086.1 Protein Homology CDS 1502976 1504034 . - 0 ID=cds-WP_024405624.1;Parent=gene-LIO31_RS07505;Dbxref=Genbank:WP_024405624.1;Name=WP_024405624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774994.1;locus_tag=LIO31_RS07505;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_024405624.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1504049 1505203 . - . ID=gene-LIO31_RS07510;Name=LIO31_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07510 NZ_CP085086.1 Protein Homology CDS 1504049 1505203 . - 0 ID=cds-WP_024399523.1;Parent=gene-LIO31_RS07510;Dbxref=Genbank:WP_024399523.1;Name=WP_024399523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922023.1;locus_tag=LIO31_RS07510;product=XRE family transcriptional regulator;protein_id=WP_024399523.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1505216 1505938 . - . ID=gene-LIO31_RS07515;Name=LIO31_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07515 NZ_CP085086.1 Protein Homology CDS 1505216 1505938 . - 0 ID=cds-WP_024405625.1;Parent=gene-LIO31_RS07515;Dbxref=Genbank:WP_024405625.1;Name=WP_024405625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774992.1;locus_tag=LIO31_RS07515;product=hypothetical protein;protein_id=WP_024405625.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1506055 1508769 . - . ID=gene-LIO31_RS07520;Name=LIO31_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07520 NZ_CP085086.1 Protein Homology CDS 1506055 1508769 . - 0 ID=cds-WP_074389052.1;Parent=gene-LIO31_RS07520;Dbxref=Genbank:WP_074389052.1;Name=WP_074389052.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735530.1;locus_tag=LIO31_RS07520;product=DEAD/DEAH box helicase family protein;protein_id=WP_074389052.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1508865 1509671 . - . ID=gene-LIO31_RS07525;Name=LIO31_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07525 NZ_CP085086.1 Protein Homology CDS 1508865 1509671 . - 0 ID=cds-WP_074389679.1;Parent=gene-LIO31_RS07525;Dbxref=Genbank:WP_074389679.1;Name=WP_074389679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922020.1;locus_tag=LIO31_RS07525;product=Fic family protein;protein_id=WP_074389679.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1509908 1510582 . - . ID=gene-LIO31_RS07530;Name=LIO31_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07530 NZ_CP085086.1 Protein Homology CDS 1509908 1510582 . - 0 ID=cds-WP_074389680.1;Parent=gene-LIO31_RS07530;Dbxref=Genbank:WP_074389680.1;Name=WP_074389680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369344.1;locus_tag=LIO31_RS07530;product=MAE_28990/MAE_18760 family HEPN-like nuclease;protein_id=WP_074389680.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1510585 1511661 . - . ID=gene-LIO31_RS07535;Name=LIO31_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07535 NZ_CP085086.1 Protein Homology CDS 1510585 1511661 . - 0 ID=cds-WP_024405467.1;Parent=gene-LIO31_RS07535;Dbxref=Genbank:WP_024405467.1;Name=WP_024405467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595403.1;locus_tag=LIO31_RS07535;product=DUF262 domain-containing protein;protein_id=WP_024405467.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1511654 1512700 . - . ID=gene-LIO31_RS07540;Name=LIO31_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07540 NZ_CP085086.1 Protein Homology CDS 1511654 1512700 . - 0 ID=cds-WP_074389681.1;Parent=gene-LIO31_RS07540;Dbxref=Genbank:WP_074389681.1;Name=WP_074389681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700045.1;locus_tag=LIO31_RS07540;product=DNA cytosine methyltransferase;protein_id=WP_074389681.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1513026 1515677 . - . ID=gene-LIO31_RS07545;Name=LIO31_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07545 NZ_CP085086.1 Protein Homology CDS 1513026 1515677 . - 0 ID=cds-WP_024405465.1;Parent=gene-LIO31_RS07545;Dbxref=Genbank:WP_024405465.1;Name=WP_024405465.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017647055.1;locus_tag=LIO31_RS07545;product=valine--tRNA ligase;protein_id=WP_024405465.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1515792 1516367 . - . ID=gene-LIO31_RS07550;Name=LIO31_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07550 NZ_CP085086.1 Protein Homology CDS 1515792 1516367 . - 0 ID=cds-WP_074389053.1;Parent=gene-LIO31_RS07550;Dbxref=Genbank:WP_074389053.1;Name=WP_074389053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922016.1;locus_tag=LIO31_RS07550;product=shikimate kinase;protein_id=WP_074389053.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1516364 1516753 . - . ID=gene-LIO31_RS07555;Name=LIO31_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07555 NZ_CP085086.1 Protein Homology CDS 1516364 1516753 . - 0 ID=cds-WP_024405464.1;Parent=gene-LIO31_RS07555;Dbxref=Genbank:WP_024405464.1;Name=WP_024405464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922679.1;locus_tag=LIO31_RS07555;product=VOC family protein;protein_id=WP_024405464.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1516995 1517370 . - . ID=gene-LIO31_RS07560;Name=LIO31_RS07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07560;pseudo=true NZ_CP085086.1 Protein Homology CDS 1516995 1517370 . - 0 ID=cds-LIO31_RS07560;Parent=gene-LIO31_RS07560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637548.1;locus_tag=LIO31_RS07560;product=helix-hairpin-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1517387 1517644 . - . ID=gene-LIO31_RS07565;Name=LIO31_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07565 NZ_CP085086.1 Protein Homology CDS 1517387 1517644 . - 0 ID=cds-WP_024405462.1;Parent=gene-LIO31_RS07565;Dbxref=Genbank:WP_024405462.1;Name=WP_024405462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074664.1;locus_tag=LIO31_RS07565;product=DUF1912 family protein;protein_id=WP_024405462.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1517749 1518750 . - . ID=gene-LIO31_RS07570;Name=LIO31_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07570 NZ_CP085086.1 Protein Homology CDS 1517749 1518750 . - 0 ID=cds-WP_024405461.1;Parent=gene-LIO31_RS07570;Dbxref=Genbank:WP_024405461.1;Name=WP_024405461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637547.1;locus_tag=LIO31_RS07570;product=galactose mutarotase;protein_id=WP_024405461.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1518930 1519331 . - . ID=gene-LIO31_RS07575;Name=LIO31_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07575 NZ_CP085086.1 Protein Homology CDS 1518930 1519331 . - 0 ID=cds-WP_004194089.1;Parent=gene-LIO31_RS07575;Dbxref=Genbank:WP_004194089.1;Name=WP_004194089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194089.1;locus_tag=LIO31_RS07575;product=PTS sugar transporter subunit IIA;protein_id=WP_004194089.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1519331 1520149 . - . ID=gene-LIO31_RS07580;Name=LIO31_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07580 NZ_CP085086.1 Protein Homology CDS 1519331 1520149 . - 0 ID=cds-WP_012774989.1;Parent=gene-LIO31_RS07580;Dbxref=Genbank:WP_012774989.1;Name=WP_012774989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774989.1;locus_tag=LIO31_RS07580;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_012774989.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1520136 1521038 . - . ID=gene-LIO31_RS07585;Name=LIO31_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07585 NZ_CP085086.1 Protein Homology CDS 1520136 1521038 . - 0 ID=cds-WP_171840748.1;Parent=gene-LIO31_RS07585;Dbxref=Genbank:WP_171840748.1;Name=WP_171840748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922767.1;locus_tag=LIO31_RS07585;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_171840748.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1521077 1521562 . - . ID=gene-LIO31_RS07590;Name=LIO31_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07590 NZ_CP085086.1 Protein Homology CDS 1521077 1521562 . - 0 ID=cds-WP_004194095.1;Parent=gene-LIO31_RS07590;Dbxref=Genbank:WP_004194095.1;Name=WP_004194095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195634.1;locus_tag=LIO31_RS07590;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_004194095.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1521616 1523388 . - . ID=gene-LIO31_RS07595;Name=LIO31_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07595 NZ_CP085086.1 Protein Homology CDS 1521616 1523388 . - 0 ID=cds-WP_024405460.1;Parent=gene-LIO31_RS07595;Dbxref=Genbank:WP_024405460.1;Name=WP_024405460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011922008.1;locus_tag=LIO31_RS07595;product=beta-galactosidase;protein_id=WP_024405460.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1523595 1524305 . + . ID=gene-LIO31_RS07600;Name=LIO31_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07600 NZ_CP085086.1 Protein Homology CDS 1523595 1524305 . + 0 ID=cds-WP_004194099.1;Parent=gene-LIO31_RS07600;Dbxref=Genbank:WP_004194099.1;Name=WP_004194099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646515.1;locus_tag=LIO31_RS07600;product=GntR family transcriptional regulator;protein_id=WP_004194099.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1524445 1525176 . - . ID=gene-LIO31_RS07605;Name=LIO31_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07605 NZ_CP085086.1 Protein Homology CDS 1524445 1525176 . - 0 ID=cds-WP_012774988.1;Parent=gene-LIO31_RS07605;Dbxref=Genbank:WP_012774988.1;Name=WP_012774988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194101.1;locus_tag=LIO31_RS07605;product=GntR family transcriptional regulator;protein_id=WP_012774988.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1525276 1525593 . - . ID=gene-LIO31_RS07610;Name=LIO31_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07610 NZ_CP085086.1 Protein Homology CDS 1525276 1525593 . - 0 ID=cds-WP_004194104.1;Parent=gene-LIO31_RS07610;Dbxref=Genbank:WP_004194104.1;Name=WP_004194104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942715.1;locus_tag=LIO31_RS07610;product=DUF960 domain-containing protein;protein_id=WP_004194104.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1525651 1526184 . - . ID=gene-LIO31_RS07615;Name=LIO31_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07615 NZ_CP085086.1 Protein Homology CDS 1525651 1526184 . - 0 ID=cds-WP_004194106.1;Parent=gene-LIO31_RS07615;Dbxref=Genbank:WP_004194106.1;Name=WP_004194106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=LIO31_RS07615;product=DUF402 domain-containing protein;protein_id=WP_004194106.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1526261 1527037 . - . ID=gene-LIO31_RS07620;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LIO31_RS07620 NZ_CP085086.1 Protein Homology CDS 1526261 1527037 . - 0 ID=cds-WP_012774987.1;Parent=gene-LIO31_RS07620;Dbxref=Genbank:WP_012774987.1;Name=WP_012774987.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637540.1;locus_tag=LIO31_RS07620;product=recombination regulator RecX;protein_id=WP_012774987.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1527075 1528427 . + . ID=gene-LIO31_RS07625;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LIO31_RS07625 NZ_CP085086.1 Protein Homology CDS 1527075 1528427 . + 0 ID=cds-WP_012775501.1;Parent=gene-LIO31_RS07625;Dbxref=Genbank:WP_012775501.1;Name=WP_012775501.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917211.1;locus_tag=LIO31_RS07625;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_012775501.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1528724 1528915 . + . ID=gene-LIO31_RS07630;Name=LIO31_RS07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07630;partial=true;pseudo=true;start_range=.,1528724 NZ_CP085086.1 Protein Homology CDS 1528724 1528915 . + 0 ID=cds-LIO31_RS07630;Parent=gene-LIO31_RS07630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014623460.1;locus_tag=LIO31_RS07630;partial=true;product=transposase;pseudo=true;start_range=.,1528724;transl_table=11 NZ_CP085086.1 RefSeq gene 1528982 1529055 . - . ID=gene-LIO31_RS07635;Name=LIO31_RS07635;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07635 NZ_CP085086.1 tRNAscan-SE tRNA 1528982 1529055 . - . ID=rna-LIO31_RS07635;Parent=gene-LIO31_RS07635;anticodon=(pos:complement(1529019..1529021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07635;product=tRNA-Pro NZ_CP085086.1 tRNAscan-SE exon 1528982 1529055 . - . ID=exon-LIO31_RS07635-1;Parent=rna-LIO31_RS07635;anticodon=(pos:complement(1529019..1529021));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07635;product=tRNA-Pro NZ_CP085086.1 RefSeq gene 1529103 1529176 . - . ID=gene-LIO31_RS07640;Name=LIO31_RS07640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07640 NZ_CP085086.1 tRNAscan-SE tRNA 1529103 1529176 . - . ID=rna-LIO31_RS07640;Parent=gene-LIO31_RS07640;anticodon=(pos:complement(1529140..1529142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07640;product=tRNA-Arg NZ_CP085086.1 tRNAscan-SE exon 1529103 1529176 . - . ID=exon-LIO31_RS07640-1;Parent=rna-LIO31_RS07640;anticodon=(pos:complement(1529140..1529142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07640;product=tRNA-Arg NZ_CP085086.1 RefSeq gene 1529195 1529278 . - . ID=gene-LIO31_RS07645;Name=LIO31_RS07645;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07645 NZ_CP085086.1 tRNAscan-SE tRNA 1529195 1529278 . - . ID=rna-LIO31_RS07645;Parent=gene-LIO31_RS07645;anticodon=(pos:complement(1529242..1529244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07645;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 1529195 1529278 . - . ID=exon-LIO31_RS07645-1;Parent=rna-LIO31_RS07645;anticodon=(pos:complement(1529242..1529244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07645;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 1529286 1529357 . - . ID=gene-LIO31_RS07650;Name=LIO31_RS07650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07650 NZ_CP085086.1 tRNAscan-SE tRNA 1529286 1529357 . - . ID=rna-LIO31_RS07650;Parent=gene-LIO31_RS07650;anticodon=(pos:complement(1529323..1529325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07650;product=tRNA-Gly NZ_CP085086.1 tRNAscan-SE exon 1529286 1529357 . - . ID=exon-LIO31_RS07650-1;Parent=rna-LIO31_RS07650;anticodon=(pos:complement(1529323..1529325));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07650;product=tRNA-Gly NZ_CP085086.1 RefSeq gene 1529370 1529442 . - . ID=gene-LIO31_RS07655;Name=LIO31_RS07655;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07655 NZ_CP085086.1 tRNAscan-SE tRNA 1529370 1529442 . - . ID=rna-LIO31_RS07655;Parent=gene-LIO31_RS07655;anticodon=(pos:complement(1529407..1529409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07655;product=tRNA-Thr NZ_CP085086.1 tRNAscan-SE exon 1529370 1529442 . - . ID=exon-LIO31_RS07655-1;Parent=rna-LIO31_RS07655;anticodon=(pos:complement(1529407..1529409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07655;product=tRNA-Thr NZ_CP085086.1 RefSeq gene 1529457 1529538 . - . ID=gene-LIO31_RS07660;Name=LIO31_RS07660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07660 NZ_CP085086.1 tRNAscan-SE tRNA 1529457 1529538 . - . ID=rna-LIO31_RS07660;Parent=gene-LIO31_RS07660;anticodon=(pos:complement(1529502..1529504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07660;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 1529457 1529538 . - . ID=exon-LIO31_RS07660-1;Parent=rna-LIO31_RS07660;anticodon=(pos:complement(1529502..1529504));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07660;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 1529542 1529614 . - . ID=gene-LIO31_RS07665;Name=LIO31_RS07665;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07665 NZ_CP085086.1 tRNAscan-SE tRNA 1529542 1529614 . - . ID=rna-LIO31_RS07665;Parent=gene-LIO31_RS07665;anticodon=(pos:complement(1529579..1529581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07665;product=tRNA-Lys NZ_CP085086.1 tRNAscan-SE exon 1529542 1529614 . - . ID=exon-LIO31_RS07665-1;Parent=rna-LIO31_RS07665;anticodon=(pos:complement(1529579..1529581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07665;product=tRNA-Lys NZ_CP085086.1 RefSeq gene 1529660 1529732 . - . ID=gene-LIO31_RS07670;Name=LIO31_RS07670;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07670 NZ_CP085086.1 tRNAscan-SE tRNA 1529660 1529732 . - . ID=rna-LIO31_RS07670;Parent=gene-LIO31_RS07670;anticodon=(pos:complement(1529697..1529699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07670;product=tRNA-Asp NZ_CP085086.1 tRNAscan-SE exon 1529660 1529732 . - . ID=exon-LIO31_RS07670-1;Parent=rna-LIO31_RS07670;anticodon=(pos:complement(1529697..1529699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07670;product=tRNA-Asp NZ_CP085086.1 RefSeq gene 1529735 1529807 . - . ID=gene-LIO31_RS07675;Name=LIO31_RS07675;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07675 NZ_CP085086.1 tRNAscan-SE tRNA 1529735 1529807 . - . ID=rna-LIO31_RS07675;Parent=gene-LIO31_RS07675;anticodon=(pos:complement(1529772..1529774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07675;product=tRNA-Val NZ_CP085086.1 tRNAscan-SE exon 1529735 1529807 . - . ID=exon-LIO31_RS07675-1;Parent=rna-LIO31_RS07675;anticodon=(pos:complement(1529772..1529774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07675;product=tRNA-Val NZ_CP085086.1 RefSeq gene 1529813 1529928 . - . ID=gene-LIO31_RS07680;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LIO31_RS07680 NZ_CP085086.1 cmsearch rRNA 1529813 1529928 . - . ID=rna-LIO31_RS07680;Parent=gene-LIO31_RS07680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07680;product=5S ribosomal RNA NZ_CP085086.1 cmsearch exon 1529813 1529928 . - . ID=exon-LIO31_RS07680-1;Parent=rna-LIO31_RS07680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07680;product=5S ribosomal RNA NZ_CP085086.1 RefSeq gene 1530015 1532918 . - . ID=gene-LIO31_RS07685;Name=LIO31_RS07685;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS07685 NZ_CP085086.1 cmsearch rRNA 1530015 1532918 . - . ID=rna-LIO31_RS07685;Parent=gene-LIO31_RS07685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07685;product=23S ribosomal RNA NZ_CP085086.1 cmsearch exon 1530015 1532918 . - . ID=exon-LIO31_RS07685-1;Parent=rna-LIO31_RS07685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07685;product=23S ribosomal RNA NZ_CP085086.1 RefSeq gene 1533199 1533271 . - . ID=gene-LIO31_RS07690;Name=LIO31_RS07690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS07690 NZ_CP085086.1 tRNAscan-SE tRNA 1533199 1533271 . - . ID=rna-LIO31_RS07690;Parent=gene-LIO31_RS07690;anticodon=(pos:complement(1533236..1533238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07690;product=tRNA-Ala NZ_CP085086.1 tRNAscan-SE exon 1533199 1533271 . - . ID=exon-LIO31_RS07690-1;Parent=rna-LIO31_RS07690;anticodon=(pos:complement(1533236..1533238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS07690;product=tRNA-Ala NZ_CP085086.1 RefSeq gene 1533325 1534873 . - . ID=gene-LIO31_RS07695;Name=LIO31_RS07695;gbkey=Gene;gene_biotype=rRNA;locus_tag=LIO31_RS07695 NZ_CP085086.1 cmsearch rRNA 1533325 1534873 . - . ID=rna-LIO31_RS07695;Parent=gene-LIO31_RS07695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07695;product=16S ribosomal RNA NZ_CP085086.1 cmsearch exon 1533325 1534873 . - . ID=exon-LIO31_RS07695-1;Parent=rna-LIO31_RS07695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS07695;product=16S ribosomal RNA NZ_CP085086.1 RefSeq gene 1535291 1535833 . - . ID=gene-LIO31_RS07700;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LIO31_RS07700 NZ_CP085086.1 Protein Homology CDS 1535291 1535833 . - 0 ID=cds-WP_004194117.1;Parent=gene-LIO31_RS07700;Dbxref=Genbank:WP_004194117.1;Name=WP_004194117.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194117.1;locus_tag=LIO31_RS07700;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_004194117.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1535988 1536161 . - . ID=gene-LIO31_RS07705;Name=LIO31_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07705 NZ_CP085086.1 GeneMarkS-2+ CDS 1535988 1536161 . - 0 ID=cds-WP_226960408.1;Parent=gene-LIO31_RS07705;Dbxref=Genbank:WP_226960408.1;Name=WP_226960408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07705;product=hypothetical protein;protein_id=WP_226960408.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1536218 1536850 . + . ID=gene-LIO31_RS07710;Name=LIO31_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07710 NZ_CP085086.1 Protein Homology CDS 1536218 1536850 . + 0 ID=cds-WP_014636235.1;Parent=gene-LIO31_RS07710;Dbxref=Genbank:WP_014636235.1;Name=WP_014636235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195179.1;locus_tag=LIO31_RS07710;product=YigZ family protein;protein_id=WP_014636235.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1536902 1537120 . - . ID=gene-LIO31_RS07715;Name=LIO31_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07715 NZ_CP085086.1 Protein Homology CDS 1536902 1537120 . - 0 ID=cds-WP_074389676.1;Parent=gene-LIO31_RS07715;Dbxref=Genbank:WP_074389676.1;Name=WP_074389676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011184577.1;locus_tag=LIO31_RS07715;product=Paratox;protein_id=WP_074389676.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1537328 1538065 . - . ID=gene-LIO31_RS07720;Name=LIO31_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07720 NZ_CP085086.1 Protein Homology CDS 1537328 1538065 . - 0 ID=cds-WP_074389675.1;Parent=gene-LIO31_RS07720;Dbxref=Genbank:WP_074389675.1;Name=WP_074389675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937838.1;locus_tag=LIO31_RS07720;product=PlySs2 family phage lysin;protein_id=WP_074389675.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1538049 1538399 . - . ID=gene-LIO31_RS07725;Name=LIO31_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07725 NZ_CP085086.1 Protein Homology CDS 1538049 1538399 . - 0 ID=cds-WP_074389674.1;Parent=gene-LIO31_RS07725;Dbxref=Genbank:WP_074389674.1;Name=WP_074389674.1;Ontology_term=GO:0034290;gbkey=CDS;go_function=holin activity|0034290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937841.1;locus_tag=LIO31_RS07725;product=phage holin;protein_id=WP_074389674.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1538410 1538745 . - . ID=gene-LIO31_RS07730;Name=LIO31_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07730 NZ_CP085086.1 GeneMarkS-2+ CDS 1538410 1538745 . - 0 ID=cds-WP_023371100.1;Parent=gene-LIO31_RS07730;Dbxref=Genbank:WP_023371100.1;Name=WP_023371100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07730;product=hypothetical protein;protein_id=WP_023371100.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1538749 1539087 . - . ID=gene-LIO31_RS07735;Name=LIO31_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07735 NZ_CP085086.1 Protein Homology CDS 1538749 1539087 . - 0 ID=cds-WP_023371101.1;Parent=gene-LIO31_RS07735;Dbxref=Genbank:WP_023371101.1;Name=WP_023371101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852365.1;locus_tag=LIO31_RS07735;product=hypothetical protein;protein_id=WP_023371101.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1539196 1539468 . - . ID=gene-LIO31_RS07740;Name=LIO31_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07740 NZ_CP085086.1 GeneMarkS-2+ CDS 1539196 1539468 . - 0 ID=cds-WP_226960409.1;Parent=gene-LIO31_RS07740;Dbxref=Genbank:WP_226960409.1;Name=WP_226960409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07740;product=hypothetical protein;protein_id=WP_226960409.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1539493 1539852 . - . ID=gene-LIO31_RS07745;Name=LIO31_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07745 NZ_CP085086.1 Protein Homology CDS 1539493 1539852 . - 0 ID=cds-WP_074389673.1;Parent=gene-LIO31_RS07745;Dbxref=Genbank:WP_074389673.1;Name=WP_074389673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195055.1;locus_tag=LIO31_RS07745;product=hypothetical protein;protein_id=WP_074389673.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1539879 1540253 . - . ID=gene-LIO31_RS07750;Name=LIO31_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07750 NZ_CP085086.1 Protein Homology CDS 1539879 1540253 . - 0 ID=cds-WP_074389672.1;Parent=gene-LIO31_RS07750;Dbxref=Genbank:WP_074389672.1;Name=WP_074389672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936853.1;locus_tag=LIO31_RS07750;product=DUF6096 family protein;protein_id=WP_074389672.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1540264 1540686 . - . ID=gene-LIO31_RS07755;Name=LIO31_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07755 NZ_CP085086.1 Protein Homology CDS 1540264 1540686 . - 0 ID=cds-WP_074389671.1;Parent=gene-LIO31_RS07755;Dbxref=Genbank:WP_074389671.1;Name=WP_074389671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195057.1;locus_tag=LIO31_RS07755;product=phage tail protein;protein_id=WP_074389671.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1540690 1541058 . - . ID=gene-LIO31_RS07760;Name=LIO31_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07760 NZ_CP085086.1 Protein Homology CDS 1540690 1541058 . - 0 ID=cds-WP_002936856.1;Parent=gene-LIO31_RS07760;Dbxref=Genbank:WP_002936856.1;Name=WP_002936856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195059.1;locus_tag=LIO31_RS07760;product=hypothetical protein;protein_id=WP_002936856.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1541055 1541567 . - . ID=gene-LIO31_RS07765;Name=LIO31_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07765 NZ_CP085086.1 Protein Homology CDS 1541055 1541567 . - 0 ID=cds-WP_074389670.1;Parent=gene-LIO31_RS07765;Dbxref=Genbank:WP_074389670.1;Name=WP_074389670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936858.1;locus_tag=LIO31_RS07765;product=HK97 gp10 family phage protein;protein_id=WP_074389670.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1541835 1542164 . - . ID=gene-LIO31_RS07770;Name=LIO31_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07770 NZ_CP085086.1 Protein Homology CDS 1541835 1542164 . - 0 ID=cds-WP_074389668.1;Parent=gene-LIO31_RS07770;Dbxref=Genbank:WP_074389668.1;Name=WP_074389668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195065.1;locus_tag=LIO31_RS07770;product=phage head-tail connector protein;protein_id=WP_074389668.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1542174 1542362 . - . ID=gene-LIO31_RS07775;Name=LIO31_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07775 NZ_CP085086.1 Protein Homology CDS 1542174 1542362 . - 0 ID=cds-WP_044693053.1;Parent=gene-LIO31_RS07775;Dbxref=Genbank:WP_044693053.1;Name=WP_044693053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936873.1;locus_tag=LIO31_RS07775;product=hypothetical protein;protein_id=WP_044693053.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1542373 1543389 . - . ID=gene-LIO31_RS07780;Name=LIO31_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07780 NZ_CP085086.1 Protein Homology CDS 1542373 1543389 . - 0 ID=cds-WP_074389667.1;Parent=gene-LIO31_RS07780;Dbxref=Genbank:WP_074389667.1;Name=WP_074389667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636666.1;locus_tag=LIO31_RS07780;product=sugar-binding protein;protein_id=WP_074389667.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1543408 1543953 . - . ID=gene-LIO31_RS07785;Name=LIO31_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07785 NZ_CP085086.1 Protein Homology CDS 1543408 1543953 . - 0 ID=cds-WP_074389666.1;Parent=gene-LIO31_RS07785;Dbxref=Genbank:WP_074389666.1;Name=WP_074389666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001556.1;locus_tag=LIO31_RS07785;product=DUF4355 domain-containing protein;protein_id=WP_074389666.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1544066 1544287 . - . ID=gene-LIO31_RS07790;Name=LIO31_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07790 NZ_CP085086.1 Protein Homology CDS 1544066 1544287 . - 0 ID=cds-WP_074389665.1;Parent=gene-LIO31_RS07790;Dbxref=Genbank:WP_074389665.1;Name=WP_074389665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165647.1;locus_tag=LIO31_RS07790;product=hypothetical protein;protein_id=WP_074389665.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1544232 1545653 . - . ID=gene-LIO31_RS07795;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=LIO31_RS07795 NZ_CP085086.1 Protein Homology CDS 1544232 1545653 . - 0 ID=cds-WP_074389664.1;Parent=gene-LIO31_RS07795;Dbxref=Genbank:WP_074389664.1;Name=WP_074389664.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936901.1;locus_tag=LIO31_RS07795;product=phage terminase large subunit;protein_id=WP_074389664.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1545643 1545801 . - . ID=gene-LIO31_RS07800;Name=LIO31_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07800 NZ_CP085086.1 GeneMarkS-2+ CDS 1545643 1545801 . - 0 ID=cds-WP_171841310.1;Parent=gene-LIO31_RS07800;Dbxref=Genbank:WP_171841310.1;Name=WP_171841310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07800;product=hypothetical protein;protein_id=WP_171841310.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1545737 1546021 . - . ID=gene-LIO31_RS07805;Name=LIO31_RS07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS07805;partial=true;pseudo=true;start_range=.,1545737 NZ_CP085086.1 Protein Homology CDS 1545737 1546021 . - 0 ID=cds-LIO31_RS07805;Parent=gene-LIO31_RS07805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411867.1;locus_tag=LIO31_RS07805;partial=true;product=ArpU family transcriptional regulator;pseudo=true;start_range=.,1545737;transl_table=11 NZ_CP085086.1 RefSeq gene 1546093 1546569 . - . ID=gene-LIO31_RS07810;Name=LIO31_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07810 NZ_CP085086.1 GeneMarkS-2+ CDS 1546093 1546569 . - 0 ID=cds-WP_074389663.1;Parent=gene-LIO31_RS07810;Dbxref=Genbank:WP_074389663.1;Name=WP_074389663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07810;product=helix-turn-helix domain-containing protein;protein_id=WP_074389663.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1546772 1546978 . - . ID=gene-LIO31_RS07815;Name=LIO31_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07815 NZ_CP085086.1 Protein Homology CDS 1546772 1546978 . - 0 ID=cds-WP_074389661.1;Parent=gene-LIO31_RS07815;Dbxref=Genbank:WP_074389661.1;Name=WP_074389661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195089.1;locus_tag=LIO31_RS07815;product=hypothetical protein;protein_id=WP_074389661.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1546975 1547118 . - . ID=gene-LIO31_RS07820;Name=LIO31_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07820 NZ_CP085086.1 GeneMarkS-2+ CDS 1546975 1547118 . - 0 ID=cds-WP_171840747.1;Parent=gene-LIO31_RS07820;Dbxref=Genbank:WP_171840747.1;Name=WP_171840747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07820;product=hypothetical protein;protein_id=WP_171840747.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1547118 1547348 . - . ID=gene-LIO31_RS07825;Name=LIO31_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07825 NZ_CP085086.1 Protein Homology CDS 1547118 1547348 . - 0 ID=cds-WP_074389660.1;Parent=gene-LIO31_RS07825;Dbxref=Genbank:WP_074389660.1;Name=WP_074389660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015898612.1;locus_tag=LIO31_RS07825;product=hypothetical protein;protein_id=WP_074389660.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1547730 1547945 . - . ID=gene-LIO31_RS07830;Name=LIO31_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07830 NZ_CP085086.1 GeneMarkS-2+ CDS 1547730 1547945 . - 0 ID=cds-WP_074389658.1;Parent=gene-LIO31_RS07830;Dbxref=Genbank:WP_074389658.1;Name=WP_074389658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07830;product=hypothetical protein;protein_id=WP_074389658.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1547942 1548232 . - . ID=gene-LIO31_RS07835;Name=LIO31_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07835 NZ_CP085086.1 Protein Homology CDS 1547942 1548232 . - 0 ID=cds-WP_074389657.1;Parent=gene-LIO31_RS07835;Dbxref=Genbank:WP_074389657.1;Name=WP_074389657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194857.1;locus_tag=LIO31_RS07835;product=hypothetical protein;protein_id=WP_074389657.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1548232 1548474 . - . ID=gene-LIO31_RS07840;Name=LIO31_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07840 NZ_CP085086.1 GeneMarkS-2+ CDS 1548232 1548474 . - 0 ID=cds-WP_074389656.1;Parent=gene-LIO31_RS07840;Dbxref=Genbank:WP_074389656.1;Name=WP_074389656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07840;product=hypothetical protein;protein_id=WP_074389656.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1548474 1548992 . - . ID=gene-LIO31_RS07845;Name=LIO31_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07845 NZ_CP085086.1 Protein Homology CDS 1548474 1548992 . - 0 ID=cds-WP_079845830.1;Parent=gene-LIO31_RS07845;Dbxref=Genbank:WP_079845830.1;Name=WP_079845830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019467.2;locus_tag=LIO31_RS07845;product=DUF1642 domain-containing protein;protein_id=WP_079845830.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1548989 1549297 . - . ID=gene-LIO31_RS07850;Name=LIO31_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07850 NZ_CP085086.1 Protein Homology CDS 1548989 1549297 . - 0 ID=cds-WP_074389655.1;Parent=gene-LIO31_RS07850;Dbxref=Genbank:WP_074389655.1;Name=WP_074389655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018781.2;locus_tag=LIO31_RS07850;product=DUF1372 family protein;protein_id=WP_074389655.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1549284 1549502 . - . ID=gene-LIO31_RS07855;Name=LIO31_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07855 NZ_CP085086.1 Protein Homology CDS 1549284 1549502 . - 0 ID=cds-WP_024393800.1;Parent=gene-LIO31_RS07855;Dbxref=Genbank:WP_024393800.1;Name=WP_024393800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165627.1;locus_tag=LIO31_RS07855;product=hypothetical protein;protein_id=WP_024393800.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1549489 1549896 . - . ID=gene-LIO31_RS07860;Name=LIO31_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07860 NZ_CP085086.1 Protein Homology CDS 1549489 1549896 . - 0 ID=cds-WP_074389654.1;Parent=gene-LIO31_RS07860;Dbxref=Genbank:WP_074389654.1;Name=WP_074389654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166260.1;locus_tag=LIO31_RS07860;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_074389654.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1549893 1550102 . - . ID=gene-LIO31_RS07865;Name=LIO31_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07865 NZ_CP085086.1 GeneMarkS-2+ CDS 1549893 1550102 . - 0 ID=cds-WP_074389653.1;Parent=gene-LIO31_RS07865;Dbxref=Genbank:WP_074389653.1;Name=WP_074389653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS07865;product=hypothetical protein;protein_id=WP_074389653.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1550437 1552710 . - . ID=gene-LIO31_RS07870;Name=LIO31_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07870 NZ_CP085086.1 Protein Homology CDS 1550437 1552710 . - 0 ID=cds-WP_074389652.1;Parent=gene-LIO31_RS07870;Dbxref=Genbank:WP_074389652.1;Name=WP_074389652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012961490.1;locus_tag=LIO31_RS07870;product=AAA family ATPase;protein_id=WP_074389652.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1552719 1554302 . - . ID=gene-LIO31_RS07875;Name=LIO31_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07875 NZ_CP085086.1 Protein Homology CDS 1552719 1554302 . - 0 ID=cds-WP_074389651.1;Parent=gene-LIO31_RS07875;Dbxref=Genbank:WP_074389651.1;Name=WP_074389651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069623.1;locus_tag=LIO31_RS07875;product=DEAD/DEAH box helicase;protein_id=WP_074389651.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1554312 1554884 . - . ID=gene-LIO31_RS07880;Name=LIO31_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07880 NZ_CP085086.1 Protein Homology CDS 1554312 1554884 . - 0 ID=cds-WP_074389650.1;Parent=gene-LIO31_RS07880;Dbxref=Genbank:WP_074389650.1;Name=WP_074389650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166265.1;locus_tag=LIO31_RS07880;product=hypothetical protein;protein_id=WP_074389650.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1554903 1555637 . - . ID=gene-LIO31_RS07885;Name=LIO31_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07885 NZ_CP085086.1 Protein Homology CDS 1554903 1555637 . - 0 ID=cds-WP_074389649.1;Parent=gene-LIO31_RS07885;Dbxref=Genbank:WP_074389649.1;Name=WP_074389649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922062.1;locus_tag=LIO31_RS07885;product=hypothetical protein;protein_id=WP_074389649.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1555639 1556058 . - . ID=gene-LIO31_RS07890;Name=LIO31_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07890 NZ_CP085086.1 Protein Homology CDS 1555639 1556058 . - 0 ID=cds-WP_024393806.1;Parent=gene-LIO31_RS07890;Dbxref=Genbank:WP_024393806.1;Name=WP_024393806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922061.1;locus_tag=LIO31_RS07890;product=hypothetical protein;protein_id=WP_024393806.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1556106 1557206 . - . ID=gene-LIO31_RS07895;Name=LIO31_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07895 NZ_CP085086.1 Protein Homology CDS 1556106 1557206 . - 0 ID=cds-WP_074389648.1;Parent=gene-LIO31_RS07895;Dbxref=Genbank:WP_074389648.1;Name=WP_074389648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167564.1;locus_tag=LIO31_RS07895;product=ATP-binding protein;protein_id=WP_074389648.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1557206 1558498 . - . ID=gene-LIO31_RS07900;Name=LIO31_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07900 NZ_CP085086.1 Protein Homology CDS 1557206 1558498 . - 0 ID=cds-WP_226960900.1;Parent=gene-LIO31_RS07900;Dbxref=Genbank:WP_226960900.1;Name=WP_226960900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166268.1;locus_tag=LIO31_RS07900;product=AAA family ATPase;protein_id=WP_226960900.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1558479 1558679 . - . ID=gene-LIO31_RS07905;Name=LIO31_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07905 NZ_CP085086.1 Protein Homology CDS 1558479 1558679 . - 0 ID=cds-WP_074389646.1;Parent=gene-LIO31_RS07905;Dbxref=Genbank:WP_074389646.1;Name=WP_074389646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000573547.1;locus_tag=LIO31_RS07905;product=hypothetical protein;protein_id=WP_074389646.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1558712 1559560 . + . ID=gene-LIO31_RS07910;Name=LIO31_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07910 NZ_CP085086.1 Protein Homology CDS 1558712 1559560 . + 0 ID=cds-WP_074389645.1;Parent=gene-LIO31_RS07910;Dbxref=Genbank:WP_074389645.1;Name=WP_074389645.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LIO31_RS07910;product=site-specific integrase;protein_id=WP_074389645.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1559792 1560718 . + . ID=gene-LIO31_RS07915;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LIO31_RS07915 NZ_CP085086.1 Protein Homology CDS 1559792 1560718 . + 0 ID=cds-WP_012774985.1;Parent=gene-LIO31_RS07915;Dbxref=Genbank:WP_012774985.1;Name=WP_012774985.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774985.1;locus_tag=LIO31_RS07915;product=cysteine synthase A;protein_id=WP_012774985.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1560744 1561115 . - . ID=gene-LIO31_RS07920;Name=LIO31_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07920 NZ_CP085086.1 Protein Homology CDS 1560744 1561115 . - 0 ID=cds-WP_002937017.1;Parent=gene-LIO31_RS07920;Dbxref=Genbank:WP_002937017.1;Name=WP_002937017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637531.1;locus_tag=LIO31_RS07920;product=S1 RNA-binding domain-containing protein;protein_id=WP_002937017.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1561117 1562517 . - . ID=gene-LIO31_RS07925;Name=LIO31_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07925 NZ_CP085086.1 Protein Homology CDS 1561117 1562517 . - 0 ID=cds-WP_024406021.1;Parent=gene-LIO31_RS07925;Dbxref=Genbank:WP_024406021.1;Name=WP_024406021.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195185.1;locus_tag=LIO31_RS07925;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_024406021.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1562567 1563208 . - . ID=gene-LIO31_RS07930;Name=LIO31_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07930 NZ_CP085086.1 Protein Homology CDS 1562567 1563208 . - 0 ID=cds-WP_002937025.1;Parent=gene-LIO31_RS07930;Dbxref=Genbank:WP_002937025.1;Name=WP_002937025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735510.1;locus_tag=LIO31_RS07930;product=response regulator transcription factor;protein_id=WP_002937025.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1563180 1564196 . - . ID=gene-LIO31_RS07935;Name=LIO31_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07935 NZ_CP085086.1 Protein Homology CDS 1563180 1564196 . - 0 ID=cds-WP_002937028.1;Parent=gene-LIO31_RS07935;Dbxref=Genbank:WP_002937028.1;Name=WP_002937028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735509.1;locus_tag=LIO31_RS07935;product=sensor histidine kinase;protein_id=WP_002937028.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1564193 1564852 . - . ID=gene-LIO31_RS07940;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=LIO31_RS07940 NZ_CP085086.1 Protein Homology CDS 1564193 1564852 . - 0 ID=cds-WP_223375661.1;Parent=gene-LIO31_RS07940;Dbxref=Genbank:WP_223375661.1;Name=WP_223375661.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774984.1;locus_tag=LIO31_RS07940;product=cell wall-active antibiotics response protein LiaF;protein_id=WP_223375661.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1565309 1567303 . - . ID=gene-LIO31_RS07945;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=LIO31_RS07945 NZ_CP085086.1 Protein Homology CDS 1565309 1567303 . - 0 ID=cds-WP_024406019.1;Parent=gene-LIO31_RS07945;Dbxref=Genbank:WP_024406019.1;Name=WP_024406019.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014635866.1;locus_tag=LIO31_RS07945;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_024406019.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1567303 1568040 . - . ID=gene-LIO31_RS07950;Name=LIO31_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07950 NZ_CP085086.1 Protein Homology CDS 1567303 1568040 . - 0 ID=cds-WP_012774983.1;Parent=gene-LIO31_RS07950;Dbxref=Genbank:WP_012774983.1;Name=WP_012774983.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194145.1;locus_tag=LIO31_RS07950;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_012774983.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1568078 1569391 . - . ID=gene-LIO31_RS07955;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LIO31_RS07955 NZ_CP085086.1 Protein Homology CDS 1568078 1569391 . - 0 ID=cds-WP_074389644.1;Parent=gene-LIO31_RS07955;Dbxref=Genbank:WP_074389644.1;Name=WP_074389644.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921990.1;locus_tag=LIO31_RS07955;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_074389644.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1569378 1570316 . - . ID=gene-LIO31_RS07960;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LIO31_RS07960 NZ_CP085086.1 Protein Homology CDS 1569378 1570316 . - 0 ID=cds-WP_011921989.1;Parent=gene-LIO31_RS07960;Dbxref=Genbank:WP_011921989.1;Name=WP_011921989.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730159.1;locus_tag=LIO31_RS07960;product=methionyl-tRNA formyltransferase;protein_id=WP_011921989.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1570448 1572838 . - . ID=gene-LIO31_RS07965;Name=LIO31_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07965 NZ_CP085086.1 Protein Homology CDS 1570448 1572838 . - 0 ID=cds-WP_074389643.1;Parent=gene-LIO31_RS07965;Dbxref=Genbank:WP_074389643.1;Name=WP_074389643.1;Ontology_term=GO:0006260,GO:0032508,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194151.1;locus_tag=LIO31_RS07965;product=primosomal protein N';protein_id=WP_074389643.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1573031 1573345 . - . ID=gene-LIO31_RS07970;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LIO31_RS07970 NZ_CP085086.1 Protein Homology CDS 1573031 1573345 . - 0 ID=cds-WP_004194153.1;Parent=gene-LIO31_RS07970;Dbxref=Genbank:WP_004194153.1;Name=WP_004194153.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817694.1;locus_tag=LIO31_RS07970;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004194153.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1573369 1573995 . - . ID=gene-LIO31_RS07975;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LIO31_RS07975 NZ_CP085086.1 Protein Homology CDS 1573369 1573995 . - 0 ID=cds-WP_012774981.1;Parent=gene-LIO31_RS07975;Dbxref=Genbank:WP_012774981.1;Name=WP_012774981.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774981.1;locus_tag=LIO31_RS07975;product=guanylate kinase;protein_id=WP_012774981.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1574150 1575763 . - . ID=gene-LIO31_RS07980;Name=LIO31_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07980 NZ_CP085086.1 Protein Homology CDS 1574150 1575763 . - 0 ID=cds-WP_011921986.1;Parent=gene-LIO31_RS07980;Dbxref=Genbank:WP_011921986.1;Name=WP_011921986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659039.1;locus_tag=LIO31_RS07980;product=ribonuclease Y;protein_id=WP_011921986.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1575893 1576375 . + . ID=gene-LIO31_RS07985;Name=LIO31_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07985 NZ_CP085086.1 Protein Homology CDS 1575893 1576375 . + 0 ID=cds-WP_004194159.1;Parent=gene-LIO31_RS07985;Dbxref=Genbank:WP_004194159.1;Name=WP_004194159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885585.1;locus_tag=LIO31_RS07985;product=S-ribosylhomocysteine lyase;protein_id=WP_004194159.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1576596 1578050 . - . ID=gene-LIO31_RS07990;Name=LIO31_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07990 NZ_CP085086.1 Protein Homology CDS 1576596 1578050 . - 0 ID=cds-WP_011921984.1;Parent=gene-LIO31_RS07990;Dbxref=Genbank:WP_011921984.1;Name=WP_011921984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014735501.1;locus_tag=LIO31_RS07990;product=cell division site-positioning protein MapZ family protein;protein_id=WP_011921984.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1578060 1579226 . - . ID=gene-LIO31_RS07995;Name=LIO31_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS07995 NZ_CP085086.1 Protein Homology CDS 1578060 1579226 . - 0 ID=cds-WP_011921983.1;Parent=gene-LIO31_RS07995;Dbxref=Genbank:WP_011921983.1;Name=WP_011921983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194163.1;locus_tag=LIO31_RS07995;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_011921983.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1579280 1579644 . - . ID=gene-LIO31_RS08000;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LIO31_RS08000 NZ_CP085086.1 cmsearch RNase_P_RNA 1579280 1579644 . - . ID=rna-LIO31_RS08000;Parent=gene-LIO31_RS08000;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS08000;product=RNase P RNA component class B NZ_CP085086.1 cmsearch exon 1579280 1579644 . - . ID=exon-LIO31_RS08000-1;Parent=rna-LIO31_RS08000;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS08000;product=RNase P RNA component class B NZ_CP085086.1 RefSeq gene 1579783 1580118 . - . ID=gene-LIO31_RS08005;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=LIO31_RS08005 NZ_CP085086.1 Protein Homology CDS 1579783 1580118 . - 0 ID=cds-WP_004194167.1;Parent=gene-LIO31_RS08005;Dbxref=Genbank:WP_004194167.1;Name=WP_004194167.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: protein motif:HMM:NF010725.0;locus_tag=LIO31_RS08005;product=cell division regulator GpsB;protein_id=WP_004194167.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1580189 1580728 . - . ID=gene-LIO31_RS08010;Name=LIO31_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08010 NZ_CP085086.1 Protein Homology CDS 1580189 1580728 . - 0 ID=cds-WP_004194171.1;Parent=gene-LIO31_RS08010;Dbxref=Genbank:WP_004194171.1;Name=WP_004194171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194171.1;locus_tag=LIO31_RS08010;product=DUF1273 domain-containing protein;protein_id=WP_004194171.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1580794 1581411 . + . ID=gene-LIO31_RS08015;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=LIO31_RS08015 NZ_CP085086.1 Protein Homology CDS 1580794 1581411 . + 0 ID=cds-WP_004194173.1;Parent=gene-LIO31_RS08015;Dbxref=Genbank:WP_004194173.1;Name=WP_004194173.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194173.1;locus_tag=LIO31_RS08015;product=Holliday junction resolvase RecU;protein_id=WP_004194173.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1581392 1583566 . + . ID=gene-LIO31_RS08020;Name=pbp1a;gbkey=Gene;gene=pbp1a;gene_biotype=protein_coding;locus_tag=LIO31_RS08020 NZ_CP085086.1 Protein Homology CDS 1581392 1583566 . + 0 ID=cds-WP_014636231.1;Parent=gene-LIO31_RS08020;Dbxref=Genbank:WP_014636231.1;Name=WP_014636231.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp1a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194174.1;locus_tag=LIO31_RS08020;product=penicillin-binding protein PBP1A;protein_id=WP_014636231.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1583625 1584338 . + . ID=gene-LIO31_RS08025;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LIO31_RS08025 NZ_CP085086.1 Protein Homology CDS 1583625 1584338 . + 0 ID=cds-WP_011921980.1;Parent=gene-LIO31_RS08025;Dbxref=Genbank:WP_011921980.1;Name=WP_011921980.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260112.1;locus_tag=LIO31_RS08025;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_011921980.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1584380 1584583 . - . ID=gene-LIO31_RS08030;Name=LIO31_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08030 NZ_CP085086.1 Protein Homology CDS 1584380 1584583 . - 0 ID=cds-WP_004195223.1;Parent=gene-LIO31_RS08030;Dbxref=Genbank:WP_004195223.1;Name=WP_004195223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637517.1;locus_tag=LIO31_RS08030;product=cold-shock protein;protein_id=WP_004195223.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1584743 1585576 . - . ID=gene-LIO31_RS08035;Name=LIO31_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08035 NZ_CP085086.1 Protein Homology CDS 1584743 1585576 . - 0 ID=cds-WP_024381722.1;Parent=gene-LIO31_RS08035;Dbxref=Genbank:WP_024381722.1;Name=WP_024381722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646498.1;locus_tag=LIO31_RS08035;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_024381722.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1585573 1587246 . - . ID=gene-LIO31_RS08040;Name=LIO31_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08040 NZ_CP085086.1 Protein Homology CDS 1585573 1587246 . - 0 ID=cds-WP_024406016.1;Parent=gene-LIO31_RS08040;Dbxref=Genbank:WP_024406016.1;Name=WP_024406016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921978.1;locus_tag=LIO31_RS08040;product=ABC transporter ATP-binding protein;protein_id=WP_024406016.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1587358 1587606 . - . ID=gene-LIO31_RS08045;Name=LIO31_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08045 NZ_CP085086.1 GeneMarkS-2+ CDS 1587358 1587606 . - 0 ID=cds-WP_024406015.1;Parent=gene-LIO31_RS08045;Dbxref=Genbank:WP_024406015.1;Name=WP_024406015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS08045;product=lactoylglutathione lyase;protein_id=WP_024406015.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1587931 1588914 . - . ID=gene-LIO31_RS08050;Name=LIO31_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08050 NZ_CP085086.1 Protein Homology CDS 1587931 1588914 . - 0 ID=cds-WP_009909407.1;Parent=gene-LIO31_RS08050;Dbxref=Genbank:WP_009909407.1;Name=WP_009909407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015646495.1;locus_tag=LIO31_RS08050;product=rhodanese-related sulfurtransferase;protein_id=WP_009909407.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1589125 1590045 . - . ID=gene-LIO31_RS08055;Name=LIO31_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08055 NZ_CP085086.1 Protein Homology CDS 1589125 1590045 . - 0 ID=cds-WP_024403006.1;Parent=gene-LIO31_RS08055;Dbxref=Genbank:WP_024403006.1;Name=WP_024403006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637512.1;locus_tag=LIO31_RS08055;product=hypothetical protein;protein_id=WP_024403006.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1590153 1590698 . - . ID=gene-LIO31_RS08060;Name=LIO31_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08060 NZ_CP085086.1 Protein Homology CDS 1590153 1590698 . - 0 ID=cds-WP_024403007.1;Parent=gene-LIO31_RS08060;Dbxref=Genbank:WP_024403007.1;Name=WP_024403007.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921974.1;locus_tag=LIO31_RS08060;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=WP_024403007.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1590719 1591567 . - . ID=gene-LIO31_RS08065;Name=LIO31_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08065 NZ_CP085086.1 Protein Homology CDS 1590719 1591567 . - 0 ID=cds-WP_004194192.1;Parent=gene-LIO31_RS08065;Dbxref=Genbank:WP_004194192.1;Name=WP_004194192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195242.1;locus_tag=LIO31_RS08065;product=S-adenosyl-l-methionine hydroxide adenosyltransferase family protein;protein_id=WP_004194192.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1591936 1592652 . - . ID=gene-LIO31_RS08070;Name=LIO31_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08070 NZ_CP085086.1 Protein Homology CDS 1591936 1592652 . - 0 ID=cds-WP_004194195.1;Parent=gene-LIO31_RS08070;Dbxref=Genbank:WP_004194195.1;Name=WP_004194195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604432.1;locus_tag=LIO31_RS08070;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_004194195.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1592813 1593124 . + . ID=gene-LIO31_RS08075;Name=LIO31_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08075 NZ_CP085086.1 Protein Homology CDS 1592813 1593124 . + 0 ID=cds-WP_004194196.1;Parent=gene-LIO31_RS08075;Dbxref=Genbank:WP_004194196.1;Name=WP_004194196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637509.1;locus_tag=LIO31_RS08075;product=PadR family transcriptional regulator;protein_id=WP_004194196.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1593135 1593761 . + . ID=gene-LIO31_RS08080;Name=LIO31_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08080 NZ_CP085086.1 Protein Homology CDS 1593135 1593761 . + 0 ID=cds-WP_011922666.1;Parent=gene-LIO31_RS08080;Dbxref=Genbank:WP_011922666.1;Name=WP_011922666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194198.1;locus_tag=LIO31_RS08080;product=DUF2812 domain-containing protein;protein_id=WP_011922666.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1593832 1596000 . - . ID=gene-LIO31_RS08085;Name=LIO31_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08085 NZ_CP085086.1 Protein Homology CDS 1593832 1596000 . - 0 ID=cds-WP_011922665.1;Parent=gene-LIO31_RS08085;Dbxref=Genbank:WP_011922665.1;Name=WP_011922665.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730154.1;locus_tag=LIO31_RS08085;product=PTS transporter subunit IIBC;protein_id=WP_011922665.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1596034 1596825 . - . ID=gene-LIO31_RS08090;Name=LIO31_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08090 NZ_CP085086.1 Protein Homology CDS 1596034 1596825 . - 0 ID=cds-WP_024406014.1;Parent=gene-LIO31_RS08090;Dbxref=Genbank:WP_024406014.1;Name=WP_024406014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194203.1;locus_tag=LIO31_RS08090;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_024406014.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1597024 1597731 . + . ID=gene-LIO31_RS08095;Name=LIO31_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08095 NZ_CP085086.1 Protein Homology CDS 1597024 1597731 . + 0 ID=cds-WP_004194205.1;Parent=gene-LIO31_RS08095;Dbxref=Genbank:WP_004194205.1;Name=WP_004194205.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018367901.1;locus_tag=LIO31_RS08095;product=UTRA domain-containing protein;protein_id=WP_004194205.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1597960 1600224 . - . ID=gene-LIO31_RS08100;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=LIO31_RS08100 NZ_CP085086.1 Protein Homology CDS 1597960 1600224 . - 0 ID=cds-WP_024406013.1;Parent=gene-LIO31_RS08100;Dbxref=Genbank:WP_024406013.1;Name=WP_024406013.1;Ontology_term=GO:0005977,GO:0004645;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA;go_process=glycogen metabolic process|0005977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194208.1;locus_tag=LIO31_RS08100;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_024406013.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1600217 1601725 . - . ID=gene-LIO31_RS08105;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LIO31_RS08105 NZ_CP085086.1 Protein Homology CDS 1600217 1601725 . - 0 ID=cds-WP_011922661.1;Parent=gene-LIO31_RS08105;Dbxref=Genbank:WP_011922661.1;Name=WP_011922661.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194210.1;locus_tag=LIO31_RS08105;product=4-alpha-glucanotransferase;protein_id=WP_011922661.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1601907 1604006 . - . ID=gene-LIO31_RS08110;Name=LIO31_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08110 NZ_CP085086.1 Protein Homology CDS 1601907 1604006 . - 0 ID=cds-WP_024406012.1;Parent=gene-LIO31_RS08110;Dbxref=Genbank:WP_024406012.1;Name=WP_024406012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012774978.1;locus_tag=LIO31_RS08110;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_024406012.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1604627 1605037 . - . ID=gene-LIO31_RS08115;Name=LIO31_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08115 NZ_CP085086.1 Protein Homology CDS 1604627 1605037 . - 0 ID=cds-WP_024394801.1;Parent=gene-LIO31_RS08115;Dbxref=Genbank:WP_024394801.1;Name=WP_024394801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194216.1;locus_tag=LIO31_RS08115;product=peptide deformylase;protein_id=WP_024394801.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1605067 1605813 . - . ID=gene-LIO31_RS08120;Name=LIO31_RS08120;end_range=1605813,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS08120;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1605067 1605813 . - 0 ID=cds-LIO31_RS08120;Parent=gene-LIO31_RS08120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1605813,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014445.2;locus_tag=LIO31_RS08120;partial=true;product=aminoacyltransferase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1605824 1606564 . - . ID=gene-LIO31_RS08125;Name=LIO31_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08125 NZ_CP085086.1 Protein Homology CDS 1605824 1606564 . - 0 ID=cds-WP_226960901.1;Parent=gene-LIO31_RS08125;Dbxref=Genbank:WP_226960901.1;Name=WP_226960901.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014445.2;locus_tag=LIO31_RS08125;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;protein_id=WP_226960901.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1606982 1608274 . + . ID=gene-LIO31_RS08130;Name=LIO31_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08130 NZ_CP085086.1 Protein Homology CDS 1606982 1608274 . + 0 ID=cds-WP_171840749.1-5;Parent=gene-LIO31_RS08130;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS08130;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1608696 1609289 . - . ID=gene-LIO31_RS08135;Name=LIO31_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08135 NZ_CP085086.1 Protein Homology CDS 1608696 1609289 . - 0 ID=cds-WP_024405962.1;Parent=gene-LIO31_RS08135;Dbxref=Genbank:WP_024405962.1;Name=WP_024405962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006268442.1;locus_tag=LIO31_RS08135;product=hypothetical protein;protein_id=WP_024405962.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1609377 1610375 . - . ID=gene-LIO31_RS08140;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LIO31_RS08140 NZ_CP085086.1 Protein Homology CDS 1609377 1610375 . - 0 ID=cds-WP_044691955.1;Parent=gene-LIO31_RS08140;Dbxref=Genbank:WP_044691955.1;Name=WP_044691955.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942685.1;locus_tag=LIO31_RS08140;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_044691955.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1610377 1612626 . - . ID=gene-LIO31_RS08145;Name=pbp2X;gbkey=Gene;gene=pbp2X;gene_biotype=protein_coding;locus_tag=LIO31_RS08145 NZ_CP085086.1 Protein Homology CDS 1610377 1612626 . - 0 ID=cds-WP_024405960.1;Parent=gene-LIO31_RS08145;Dbxref=Genbank:WP_024405960.1;Name=WP_024405960.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2X;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636704.1;locus_tag=LIO31_RS08145;product=penicillin-binding protein PBP2X;protein_id=WP_024405960.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1612626 1612949 . - . ID=gene-LIO31_RS08150;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LIO31_RS08150 NZ_CP085086.1 Protein Homology CDS 1612626 1612949 . - 0 ID=cds-WP_012027653.1;Parent=gene-LIO31_RS08150;Dbxref=Genbank:WP_012027653.1;Name=WP_012027653.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937992.1;locus_tag=LIO31_RS08150;product=cell division protein FtsL;protein_id=WP_012027653.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1612960 1613910 . - . ID=gene-LIO31_RS08155;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LIO31_RS08155 NZ_CP085086.1 Protein Homology CDS 1612960 1613910 . - 0 ID=cds-WP_024405959.1;Parent=gene-LIO31_RS08155;Dbxref=Genbank:WP_024405959.1;Name=WP_024405959.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016466808.1;locus_tag=LIO31_RS08155;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_024405959.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1614181 1614369 . + . ID=gene-LIO31_RS08160;Name=LIO31_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08160 NZ_CP085086.1 Protein Homology CDS 1614181 1614369 . + 0 ID=cds-WP_002942681.1;Parent=gene-LIO31_RS08160;Dbxref=Genbank:WP_002942681.1;Name=WP_002942681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027655.1;locus_tag=LIO31_RS08160;product=helix-turn-helix transcriptional regulator;protein_id=WP_002942681.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1614380 1614913 . + . ID=gene-LIO31_RS08165;Name=LIO31_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08165 NZ_CP085086.1 Protein Homology CDS 1614380 1614913 . + 0 ID=cds-WP_024405958.1;Parent=gene-LIO31_RS08165;Dbxref=Genbank:WP_024405958.1;Name=WP_024405958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027656.1;locus_tag=LIO31_RS08165;product=DUF3278 domain-containing protein;protein_id=WP_024405958.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1614928 1615128 . + . ID=gene-LIO31_RS08170;Name=LIO31_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08170 NZ_CP085086.1 Protein Homology CDS 1614928 1615128 . + 0 ID=cds-WP_012027657.1;Parent=gene-LIO31_RS08170;Dbxref=Genbank:WP_012027657.1;Name=WP_012027657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027657.1;locus_tag=LIO31_RS08170;product=membrane protein;protein_id=WP_012027657.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1615139 1616221 . + . ID=gene-LIO31_RS08175;Name=LIO31_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08175 NZ_CP085086.1 Protein Homology CDS 1615139 1616221 . + 0 ID=cds-WP_012027658.1;Parent=gene-LIO31_RS08175;Dbxref=Genbank:WP_012027658.1;Name=WP_012027658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027658.1;locus_tag=LIO31_RS08175;product=DUF3278 domain-containing protein;protein_id=WP_012027658.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1616328 1616579 . + . ID=gene-LIO31_RS08180;Name=LIO31_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08180 NZ_CP085086.1 GeneMarkS-2+ CDS 1616328 1616579 . + 0 ID=cds-WP_226319144.1;Parent=gene-LIO31_RS08180;Dbxref=Genbank:WP_226319144.1;Name=WP_226319144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS08180;product=hypothetical protein;protein_id=WP_226319144.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1616569 1616916 . + . ID=gene-LIO31_RS08185;Name=LIO31_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08185 NZ_CP085086.1 Protein Homology CDS 1616569 1616916 . + 0 ID=cds-WP_012027660.1;Parent=gene-LIO31_RS08185;Dbxref=Genbank:WP_012027660.1;Name=WP_012027660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027660.1;locus_tag=LIO31_RS08185;product=hypothetical protein;protein_id=WP_012027660.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1616969 1617397 . + . ID=gene-LIO31_RS08190;Name=LIO31_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08190 NZ_CP085086.1 Protein Homology CDS 1616969 1617397 . + 0 ID=cds-WP_012775307.1;Parent=gene-LIO31_RS08190;Dbxref=Genbank:WP_012775307.1;Name=WP_012775307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775307.1;locus_tag=LIO31_RS08190;product=NusG domain II-containing protein;protein_id=WP_012775307.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1617705 1618661 . - . ID=gene-LIO31_RS08195;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=LIO31_RS08195 NZ_CP085086.1 Protein Homology CDS 1617705 1618661 . - 0 ID=cds-WP_024393880.1;Parent=gene-LIO31_RS08195;Dbxref=Genbank:WP_024393880.1;Name=WP_024393880.1;Ontology_term=GO:0004659;gbkey=CDS;gene=menA;go_function=prenyltransferase activity|0004659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736269.1;locus_tag=LIO31_RS08195;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_024393880.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1618654 1619703 . - . ID=gene-LIO31_RS08200;Name=LIO31_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08200 NZ_CP085086.1 Protein Homology CDS 1618654 1619703 . - 0 ID=cds-WP_024405956.1;Parent=gene-LIO31_RS08200;Dbxref=Genbank:WP_024405956.1;Name=WP_024405956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938004.1;locus_tag=LIO31_RS08200;product=FAD:protein FMN transferase;protein_id=WP_024405956.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1619781 1620260 . - . ID=gene-LIO31_RS08205;Name=LIO31_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08205 NZ_CP085086.1 Protein Homology CDS 1619781 1620260 . - 0 ID=cds-WP_024381920.1;Parent=gene-LIO31_RS08205;Dbxref=Genbank:WP_024381920.1;Name=WP_024381920.1;Ontology_term=GO:0010181,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938006.1;locus_tag=LIO31_RS08205;product=FMN-binding protein;protein_id=WP_024381920.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1620339 1621328 . - . ID=gene-LIO31_RS08210;Name=LIO31_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08210 NZ_CP085086.1 Protein Homology CDS 1620339 1621328 . - 0 ID=cds-WP_024405955.1;Parent=gene-LIO31_RS08210;Dbxref=Genbank:WP_024405955.1;Name=WP_024405955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647285.1;locus_tag=LIO31_RS08210;product=polyprenyl synthetase family protein;protein_id=WP_024405955.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1621347 1623239 . - . ID=gene-LIO31_RS08215;Name=LIO31_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08215 NZ_CP085086.1 Protein Homology CDS 1621347 1623239 . - 0 ID=cds-WP_074389735.1;Parent=gene-LIO31_RS08215;Dbxref=Genbank:WP_074389735.1;Name=WP_074389735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638535.1;locus_tag=LIO31_RS08215;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_074389735.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1623422 1623961 . + . ID=gene-LIO31_RS08220;Name=LIO31_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08220 NZ_CP085086.1 Protein Homology CDS 1623422 1623961 . + 0 ID=cds-WP_074389736.1;Parent=gene-LIO31_RS08220;Dbxref=Genbank:WP_074389736.1;Name=WP_074389736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027668.1;locus_tag=LIO31_RS08220;product=Gx transporter family protein;protein_id=WP_074389736.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1624225 1625574 . + . ID=gene-LIO31_RS08225;Name=LIO31_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08225 NZ_CP085086.1 Protein Homology CDS 1624225 1625574 . + 0 ID=cds-WP_002938011.1;Parent=gene-LIO31_RS08225;Dbxref=Genbank:WP_002938011.1;Name=WP_002938011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938011.1;locus_tag=LIO31_RS08225;product=potassium transporter Trk;protein_id=WP_002938011.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1625586 1626251 . + . ID=gene-LIO31_RS08230;Name=LIO31_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08230 NZ_CP085086.1 Protein Homology CDS 1625586 1626251 . + 0 ID=cds-WP_002938014.1;Parent=gene-LIO31_RS08230;Dbxref=Genbank:WP_002938014.1;Name=WP_002938014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938014.1;locus_tag=LIO31_RS08230;product=TrkA family potassium uptake protein;protein_id=WP_002938014.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1626572 1627909 . + . ID=gene-LIO31_RS08235;Name=LIO31_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08235 NZ_CP085086.1 Protein Homology CDS 1626572 1627909 . + 0 ID=cds-WP_012775674.1;Parent=gene-LIO31_RS08235;Dbxref=Genbank:WP_012775674.1;Name=WP_012775674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942636.1;locus_tag=LIO31_RS08235;product=MATE family efflux transporter;protein_id=WP_012775674.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1627931 1628302 . - . ID=gene-LIO31_RS08240;Name=LIO31_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08240 NZ_CP085086.1 Protein Homology CDS 1627931 1628302 . - 0 ID=cds-WP_012775312.1;Parent=gene-LIO31_RS08240;Dbxref=Genbank:WP_012775312.1;Name=WP_012775312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647290.1;locus_tag=LIO31_RS08240;product=hypothetical protein;protein_id=WP_012775312.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1628757 1629014 . - . ID=gene-LIO31_RS08245;Name=LIO31_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08245 NZ_CP085086.1 Protein Homology CDS 1628757 1629014 . - 0 ID=cds-WP_002939394.1;Parent=gene-LIO31_RS08245;Dbxref=Genbank:WP_002939394.1;Name=WP_002939394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901318.1;locus_tag=LIO31_RS08245;product=DUF896 family protein;protein_id=WP_002939394.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1629024 1631060 . - . ID=gene-LIO31_RS08250;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LIO31_RS08250 NZ_CP085086.1 Protein Homology CDS 1629024 1631060 . - 0 ID=cds-WP_074389737.1;Parent=gene-LIO31_RS08250;Dbxref=Genbank:WP_074389737.1;Name=WP_074389737.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768433.1;locus_tag=LIO31_RS08250;product=glycine--tRNA ligase subunit beta;protein_id=WP_074389737.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1631060 1631977 . - . ID=gene-LIO31_RS08255;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LIO31_RS08255 NZ_CP085086.1 Protein Homology CDS 1631060 1631977 . - 0 ID=cds-WP_002939388.1;Parent=gene-LIO31_RS08255;Dbxref=Genbank:WP_002939388.1;Name=WP_002939388.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018163989.1;locus_tag=LIO31_RS08255;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002939388.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1632288 1632767 . - . ID=gene-LIO31_RS08260;Name=LIO31_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08260 NZ_CP085086.1 Protein Homology CDS 1632288 1632767 . - 0 ID=cds-WP_012027674.1;Parent=gene-LIO31_RS08260;Dbxref=Genbank:WP_012027674.1;Name=WP_012027674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027674.1;locus_tag=LIO31_RS08260;product=DUF1398 family protein;protein_id=WP_012027674.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1633034 1633738 . - . ID=gene-LIO31_RS08265;Name=LIO31_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08265 NZ_CP085086.1 Protein Homology CDS 1633034 1633738 . - 0 ID=cds-WP_012027675.1;Parent=gene-LIO31_RS08265;Dbxref=Genbank:WP_012027675.1;Name=WP_012027675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027675.1;locus_tag=LIO31_RS08265;product=B3/4 domain-containing protein;protein_id=WP_012027675.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1633920 1634612 . - . ID=gene-LIO31_RS08270;Name=LIO31_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08270 NZ_CP085086.1 Protein Homology CDS 1633920 1634612 . - 0 ID=cds-WP_012027676.1;Parent=gene-LIO31_RS08270;Dbxref=Genbank:WP_012027676.1;Name=WP_012027676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939275.1;locus_tag=LIO31_RS08270;product=ABC transporter permease;protein_id=WP_012027676.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1634613 1635677 . - . ID=gene-LIO31_RS08275;Name=LIO31_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08275 NZ_CP085086.1 Protein Homology CDS 1634613 1635677 . - 0 ID=cds-WP_012775313.1;Parent=gene-LIO31_RS08275;Dbxref=Genbank:WP_012775313.1;Name=WP_012775313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775313.1;locus_tag=LIO31_RS08275;product=methionine ABC transporter ATP-binding protein;protein_id=WP_012775313.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1635670 1637037 . - . ID=gene-LIO31_RS08280;Name=LIO31_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08280 NZ_CP085086.1 Protein Homology CDS 1635670 1637037 . - 0 ID=cds-WP_024405950.1;Parent=gene-LIO31_RS08280;Dbxref=Genbank:WP_024405950.1;Name=WP_024405950.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637139.1;locus_tag=LIO31_RS08280;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_024405950.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1637194 1638045 . - . ID=gene-LIO31_RS08285;Name=LIO31_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08285 NZ_CP085086.1 Protein Homology CDS 1637194 1638045 . - 0 ID=cds-WP_012028456.1;Parent=gene-LIO31_RS08285;Dbxref=Genbank:WP_012028456.1;Name=WP_012028456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028456.1;locus_tag=LIO31_RS08285;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_012028456.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1638195 1638884 . - . ID=gene-LIO31_RS08290;Name=LIO31_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08290 NZ_CP085086.1 Protein Homology CDS 1638195 1638884 . - 0 ID=cds-WP_074389738.1;Parent=gene-LIO31_RS08290;Dbxref=Genbank:WP_074389738.1;Name=WP_074389738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736287.1;locus_tag=LIO31_RS08290;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_074389738.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1639265 1641514 . + . ID=gene-LIO31_RS08295;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LIO31_RS08295 NZ_CP085086.1 Protein Homology CDS 1639265 1641514 . + 0 ID=cds-WP_074389739.1;Parent=gene-LIO31_RS08295;Dbxref=Genbank:WP_074389739.1;Name=WP_074389739.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009729869.1;locus_tag=LIO31_RS08295;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_074389739.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1641518 1642378 . + . ID=gene-LIO31_RS08300;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LIO31_RS08300 NZ_CP085086.1 Protein Homology CDS 1641518 1642378 . + 0 ID=cds-WP_024405948.1;Parent=gene-LIO31_RS08300;Dbxref=Genbank:WP_024405948.1;Name=WP_024405948.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942586.1;locus_tag=LIO31_RS08300;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_024405948.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1642726 1644186 . - . ID=gene-LIO31_RS08305;Name=LIO31_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08305 NZ_CP085086.1 Protein Homology CDS 1642726 1644186 . - 0 ID=cds-WP_012775676.1;Parent=gene-LIO31_RS08305;Dbxref=Genbank:WP_012775676.1;Name=WP_012775676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942584.1;locus_tag=LIO31_RS08305;product=NCS2 family permease;protein_id=WP_012775676.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1644531 1645343 . + . ID=gene-LIO31_RS08310;Name=LIO31_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08310 NZ_CP085086.1 Protein Homology CDS 1644531 1645343 . + 0 ID=cds-WP_012775314.1;Parent=gene-LIO31_RS08310;Dbxref=Genbank:WP_012775314.1;Name=WP_012775314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942579.1;locus_tag=LIO31_RS08310;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_012775314.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1645565 1646557 . + . ID=gene-LIO31_RS08315;Name=LIO31_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08315 NZ_CP085086.1 Protein Homology CDS 1645565 1646557 . + 0 ID=cds-WP_012775315.1;Parent=gene-LIO31_RS08315;Dbxref=Genbank:WP_012775315.1;Name=WP_012775315.1;Ontology_term=GO:0009401,GO:0008982,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308759.1;locus_tag=LIO31_RS08315;product=PTS sugar transporter subunit IIB;protein_id=WP_012775315.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1646589 1647398 . + . ID=gene-LIO31_RS08320;Name=LIO31_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08320 NZ_CP085086.1 Protein Homology CDS 1646589 1647398 . + 0 ID=cds-WP_009910688.1;Parent=gene-LIO31_RS08320;Dbxref=Genbank:WP_009910688.1;Name=WP_009910688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280330.1;locus_tag=LIO31_RS08320;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_009910688.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1647416 1648327 . + . ID=gene-LIO31_RS08325;Name=LIO31_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08325 NZ_CP085086.1 Protein Homology CDS 1647416 1648327 . + 0 ID=cds-WP_009910689.1;Parent=gene-LIO31_RS08325;Dbxref=Genbank:WP_009910689.1;Name=WP_009910689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638556.1;locus_tag=LIO31_RS08325;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_009910689.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1648387 1648758 . + . ID=gene-LIO31_RS08330;Name=LIO31_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08330 NZ_CP085086.1 Protein Homology CDS 1648387 1648758 . + 0 ID=cds-WP_012027688.1;Parent=gene-LIO31_RS08330;Dbxref=Genbank:WP_012027688.1;Name=WP_012027688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647304.1;locus_tag=LIO31_RS08330;product=DUF956 family protein;protein_id=WP_012027688.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1648976 1650250 . + . ID=gene-LIO31_RS08335;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LIO31_RS08335 NZ_CP085086.1 Protein Homology CDS 1648976 1650250 . + 0 ID=cds-WP_012775316.1;Parent=gene-LIO31_RS08335;Dbxref=Genbank:WP_012775316.1;Name=WP_012775316.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000884256.1;locus_tag=LIO31_RS08335;product=serine--tRNA ligase;protein_id=WP_012775316.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1650301 1651890 . - . ID=gene-LIO31_RS08340;Name=LIO31_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08340 NZ_CP085086.1 Protein Homology CDS 1650301 1651890 . - 0 ID=cds-WP_012775679.1;Parent=gene-LIO31_RS08340;Dbxref=Genbank:WP_012775679.1;Name=WP_012775679.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028460.1;locus_tag=LIO31_RS08340;product=type I restriction-modification system subunit M;protein_id=WP_012775679.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1651935 1652543 . - . ID=gene-LIO31_RS08345;Name=LIO31_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08345 NZ_CP085086.1 Protein Homology CDS 1651935 1652543 . - 0 ID=cds-WP_024405947.1;Parent=gene-LIO31_RS08345;Dbxref=Genbank:WP_024405947.1;Name=WP_024405947.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736297.1;locus_tag=LIO31_RS08345;product=restriction endonuclease subunit S;protein_id=WP_024405947.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1652651 1655857 . - . ID=gene-LIO31_RS08350;Name=LIO31_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08350 NZ_CP085086.1 Protein Homology CDS 1652651 1655857 . - 0 ID=cds-WP_024405946.1;Parent=gene-LIO31_RS08350;Dbxref=Genbank:WP_024405946.1;Name=WP_024405946.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027694.1;locus_tag=LIO31_RS08350;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_024405946.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1655850 1656425 . - . ID=gene-LIO31_RS08355;Name=LIO31_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08355 NZ_CP085086.1 Protein Homology CDS 1655850 1656425 . - 0 ID=cds-WP_012775681.1;Parent=gene-LIO31_RS08355;Dbxref=Genbank:WP_012775681.1;Name=WP_012775681.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194700.1;locus_tag=LIO31_RS08355;product=restriction endonuclease subunit S;protein_id=WP_012775681.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1656546 1657472 . + . ID=gene-LIO31_RS08360;Name=LIO31_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08360 NZ_CP085086.1 Protein Homology CDS 1656546 1657472 . + 0 ID=cds-WP_012028462.1;Parent=gene-LIO31_RS08360;Dbxref=Genbank:WP_012028462.1;Name=WP_012028462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736299.1;locus_tag=LIO31_RS08360;product=site-specific integrase;protein_id=WP_012028462.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1657526 1657918 . - . ID=gene-LIO31_RS08365;Name=LIO31_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08365 NZ_CP085086.1 Protein Homology CDS 1657526 1657918 . - 0 ID=cds-WP_012027699.1;Parent=gene-LIO31_RS08365;Dbxref=Genbank:WP_012027699.1;Name=WP_012027699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637146.1;locus_tag=LIO31_RS08365;product=CPBP family intramembrane metalloprotease;protein_id=WP_012027699.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1657939 1658184 . - . ID=gene-LIO31_RS08370;Name=LIO31_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08370 NZ_CP085086.1 Protein Homology CDS 1657939 1658184 . - 0 ID=cds-WP_014636119.1;Parent=gene-LIO31_RS08370;Dbxref=Genbank:WP_014636119.1;Name=WP_014636119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636119.1;locus_tag=LIO31_RS08370;product=hypothetical protein;protein_id=WP_014636119.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1658362 1658994 . - . ID=gene-LIO31_RS08375;Name=LIO31_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08375 NZ_CP085086.1 Protein Homology CDS 1658362 1658994 . - 0 ID=cds-WP_012027700.1;Parent=gene-LIO31_RS08375;Dbxref=Genbank:WP_012027700.1;Name=WP_012027700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736300.1;locus_tag=LIO31_RS08375;product=hypothetical protein;protein_id=WP_012027700.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1658987 1659460 . - . ID=gene-LIO31_RS08380;Name=LIO31_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08380 NZ_CP085086.1 Protein Homology CDS 1658987 1659460 . - 0 ID=cds-WP_024405944.1;Parent=gene-LIO31_RS08380;Dbxref=Genbank:WP_024405944.1;Name=WP_024405944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938864.1;locus_tag=LIO31_RS08380;product=GNAT family N-acetyltransferase;protein_id=WP_024405944.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1659525 1660298 . - . ID=gene-LIO31_RS08385;Name=LIO31_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08385 NZ_CP085086.1 Protein Homology CDS 1659525 1660298 . - 0 ID=cds-WP_074389741.1;Parent=gene-LIO31_RS08385;Dbxref=Genbank:WP_074389741.1;Name=WP_074389741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942538.1;locus_tag=LIO31_RS08385;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_074389741.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1660295 1661161 . - . ID=gene-LIO31_RS08390;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LIO31_RS08390 NZ_CP085086.1 Protein Homology CDS 1660295 1661161 . - 0 ID=cds-WP_012028463.1;Parent=gene-LIO31_RS08390;Dbxref=Genbank:WP_012028463.1;Name=WP_012028463.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028463.1;locus_tag=LIO31_RS08390;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_012028463.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1661176 1662549 . - . ID=gene-LIO31_RS08395;Name=LIO31_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08395 NZ_CP085086.1 Protein Homology CDS 1661176 1662549 . - 0 ID=cds-WP_024405942.1;Parent=gene-LIO31_RS08395;Dbxref=Genbank:WP_024405942.1;Name=WP_024405942.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938870.1;locus_tag=LIO31_RS08395;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_024405942.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1662843 1663265 . - . ID=gene-LIO31_RS08400;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LIO31_RS08400 NZ_CP085086.1 Protein Homology CDS 1662843 1663265 . - 0 ID=cds-WP_012028464.1;Parent=gene-LIO31_RS08400;Dbxref=Genbank:WP_012028464.1;Name=WP_012028464.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922202.1;locus_tag=LIO31_RS08400;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_012028464.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1663262 1663738 . - . ID=gene-LIO31_RS08405;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LIO31_RS08405 NZ_CP085086.1 Protein Homology CDS 1663262 1663738 . - 0 ID=cds-WP_226960902.1;Parent=gene-LIO31_RS08405;Dbxref=Genbank:WP_226960902.1;Name=WP_226960902.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028465.1;locus_tag=LIO31_RS08405;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_226960902.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1663739 1664974 . - . ID=gene-LIO31_RS08410;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LIO31_RS08410 NZ_CP085086.1 Protein Homology CDS 1663739 1664974 . - 0 ID=cds-WP_012027709.1;Parent=gene-LIO31_RS08410;Dbxref=Genbank:WP_012027709.1;Name=WP_012027709.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638567.1;locus_tag=LIO31_RS08410;product=beta-ketoacyl-ACP synthase II;protein_id=WP_012027709.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1665000 1665734 . - . ID=gene-LIO31_RS08415;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LIO31_RS08415 NZ_CP085086.1 Protein Homology CDS 1665000 1665734 . - 0 ID=cds-WP_012027710.1;Parent=gene-LIO31_RS08415;Dbxref=Genbank:WP_012027710.1;Name=WP_012027710.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011225529.1;locus_tag=LIO31_RS08415;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_012027710.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1665744 1666664 . - . ID=gene-LIO31_RS08420;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LIO31_RS08420 NZ_CP085086.1 Protein Homology CDS 1665744 1666664 . - 0 ID=cds-WP_012775318.1;Parent=gene-LIO31_RS08420;Dbxref=Genbank:WP_012775318.1;Name=WP_012775318.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938887.1;locus_tag=LIO31_RS08420;product=ACP S-malonyltransferase;protein_id=WP_012775318.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1666666 1667631 . - . ID=gene-LIO31_RS08425;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=LIO31_RS08425 NZ_CP085086.1 Protein Homology CDS 1666666 1667631 . - 0 ID=cds-WP_002938889.1;Parent=gene-LIO31_RS08425;Dbxref=Genbank:WP_002938889.1;Name=WP_002938889.1;Ontology_term=GO:0018580;gbkey=CDS;gene=fabK;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942510.1;locus_tag=LIO31_RS08425;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=WP_002938889.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1667803 1668027 . - . ID=gene-LIO31_RS08430;Name=LIO31_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08430 NZ_CP085086.1 Protein Homology CDS 1667803 1668027 . - 0 ID=cds-WP_074389742.1;Parent=gene-LIO31_RS08430;Dbxref=Genbank:WP_074389742.1;Name=WP_074389742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938891.1;locus_tag=LIO31_RS08430;product=acyl carrier protein;protein_id=WP_074389742.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1668087 1669064 . - . ID=gene-LIO31_RS08435;Name=LIO31_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08435 NZ_CP085086.1 Protein Homology CDS 1668087 1669064 . - 0 ID=cds-WP_024405941.1;Parent=gene-LIO31_RS08435;Dbxref=Genbank:WP_024405941.1;Name=WP_024405941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638571.1;locus_tag=LIO31_RS08435;product=ketoacyl-ACP synthase III;protein_id=WP_024405941.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1669061 1669495 . - . ID=gene-LIO31_RS08440;Name=LIO31_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08440 NZ_CP085086.1 Protein Homology CDS 1669061 1669495 . - 0 ID=cds-WP_012775319.1;Parent=gene-LIO31_RS08440;Dbxref=Genbank:WP_012775319.1;Name=WP_012775319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027713.1;locus_tag=LIO31_RS08440;product=MarR family transcriptional regulator;protein_id=WP_012775319.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1669575 1670366 . - . ID=gene-LIO31_RS08445;Name=LIO31_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08445 NZ_CP085086.1 Protein Homology CDS 1669575 1670366 . - 0 ID=cds-WP_012027714.1;Parent=gene-LIO31_RS08445;Dbxref=Genbank:WP_012027714.1;Name=WP_012027714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736313.1;locus_tag=LIO31_RS08445;product=enoyl-CoA hydratase;protein_id=WP_012027714.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1670802 1671443 . - . ID=gene-LIO31_RS08450;Name=LIO31_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08450 NZ_CP085086.1 Protein Homology CDS 1670802 1671443 . - 0 ID=cds-WP_012027715.1;Parent=gene-LIO31_RS08450;Dbxref=Genbank:WP_012027715.1;Name=WP_012027715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938244.1;locus_tag=LIO31_RS08450;product=HAD family phosphatase;protein_id=WP_012027715.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1671621 1672976 . + . ID=gene-LIO31_RS08455;Name=LIO31_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08455 NZ_CP085086.1 Protein Homology CDS 1671621 1672976 . + 0 ID=cds-WP_002942489.1;Parent=gene-LIO31_RS08455;Dbxref=Genbank:WP_002942489.1;Name=WP_002942489.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647320.1;locus_tag=LIO31_RS08455;product=aspartate kinase;protein_id=WP_002942489.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1673916 1675019 . - . ID=gene-LIO31_RS08460;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LIO31_RS08460 NZ_CP085086.1 Protein Homology CDS 1673916 1675019 . - 0 ID=cds-WP_012027717.1;Parent=gene-LIO31_RS08460;Dbxref=Genbank:WP_012027717.1;Name=WP_012027717.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011226530.1;locus_tag=LIO31_RS08460;product=alanine racemase;protein_id=WP_012027717.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1675012 1675371 . - . ID=gene-LIO31_RS08465;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LIO31_RS08465 NZ_CP085086.1 Protein Homology CDS 1675012 1675371 . - 0 ID=cds-WP_012027718.1;Parent=gene-LIO31_RS08465;Dbxref=Genbank:WP_012027718.1;Name=WP_012027718.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027718.1;locus_tag=LIO31_RS08465;product=holo-ACP synthase;protein_id=WP_012027718.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1675486 1678011 . - . ID=gene-LIO31_RS08470;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LIO31_RS08470 NZ_CP085086.1 Protein Homology CDS 1675486 1678011 . - 0 ID=cds-WP_002938259.1;Parent=gene-LIO31_RS08470;Dbxref=Genbank:WP_002938259.1;Name=WP_002938259.1;Ontology_term=GO:0043952,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647322.1;locus_tag=LIO31_RS08470;product=preprotein translocase subunit SecA;protein_id=WP_002938259.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1678331 1681357 . - . ID=gene-LIO31_RS08475;Name=LIO31_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08475 NZ_CP085086.1 Protein Homology CDS 1678331 1681357 . - 0 ID=cds-WP_074389744.1;Parent=gene-LIO31_RS08475;Dbxref=Genbank:WP_074389744.1;Name=WP_074389744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917307.1;locus_tag=LIO31_RS08475;product=ribonuclease;protein_id=WP_074389744.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1681966 1682850 . - . ID=gene-LIO31_RS08480;Name=LIO31_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08480 NZ_CP085086.1 Protein Homology CDS 1681966 1682850 . - 0 ID=cds-WP_023371421.1;Parent=gene-LIO31_RS08480;Dbxref=Genbank:WP_023371421.1;Name=WP_023371421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938265.1;locus_tag=LIO31_RS08480;product=ROK family protein;protein_id=WP_023371421.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1682979 1684925 . - . ID=gene-LIO31_RS08485;Name=LIO31_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08485 NZ_CP085086.1 Protein Homology CDS 1682979 1684925 . - 0 ID=cds-WP_226960903.1;Parent=gene-LIO31_RS08485;Dbxref=Genbank:WP_226960903.1;Name=WP_226960903.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262657.1;locus_tag=LIO31_RS08485;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_226960903.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1685130 1686584 . + . ID=gene-LIO31_RS08490;Name=LIO31_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08490 NZ_CP085086.1 Protein Homology CDS 1685130 1686584 . + 0 ID=cds-WP_024383852.1;Parent=gene-LIO31_RS08490;Dbxref=Genbank:WP_024383852.1;Name=WP_024383852.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455313.1;locus_tag=LIO31_RS08490;product=sucrose-6-phosphate hydrolase;protein_id=WP_024383852.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1686565 1687530 . + . ID=gene-LIO31_RS08495;Name=LIO31_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08495 NZ_CP085086.1 Protein Homology CDS 1686565 1687530 . + 0 ID=cds-WP_002942449.1;Parent=gene-LIO31_RS08495;Dbxref=Genbank:WP_002942449.1;Name=WP_002942449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929307.1;locus_tag=LIO31_RS08495;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002942449.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1687609 1688028 . - . ID=gene-LIO31_RS08500;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LIO31_RS08500 NZ_CP085086.1 Protein Homology CDS 1687609 1688028 . - 0 ID=cds-WP_023371427.1;Parent=gene-LIO31_RS08500;Dbxref=Genbank:WP_023371427.1;Name=WP_023371427.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938276.1;locus_tag=LIO31_RS08500;product=transcription antitermination factor NusB;protein_id=WP_023371427.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1688018 1688410 . - . ID=gene-LIO31_RS08505;Name=LIO31_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08505 NZ_CP085086.1 Protein Homology CDS 1688018 1688410 . - 0 ID=cds-WP_015647326.1;Parent=gene-LIO31_RS08505;Dbxref=Genbank:WP_015647326.1;Name=WP_015647326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942446.1;locus_tag=LIO31_RS08505;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_015647326.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1688438 1688995 . - . ID=gene-LIO31_RS08510;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LIO31_RS08510 NZ_CP085086.1 Protein Homology CDS 1688438 1688995 . - 0 ID=cds-WP_002942436.1;Parent=gene-LIO31_RS08510;Dbxref=Genbank:WP_002942436.1;Name=WP_002942436.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=LIO31_RS08510;product=elongation factor P;protein_id=WP_002942436.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1689059 1690120 . - . ID=gene-LIO31_RS08515;Name=LIO31_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08515 NZ_CP085086.1 Protein Homology CDS 1689059 1690120 . - 0 ID=cds-WP_074389745.1;Parent=gene-LIO31_RS08515;Dbxref=Genbank:WP_074389745.1;Name=WP_074389745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775324.1;locus_tag=LIO31_RS08515;product=Xaa-Pro peptidase family protein;protein_id=WP_074389745.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1690219 1693044 . - . ID=gene-LIO31_RS08520;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LIO31_RS08520 NZ_CP085086.1 Protein Homology CDS 1690219 1693044 . - 0 ID=cds-WP_023371429.1;Parent=gene-LIO31_RS08520;Dbxref=Genbank:WP_023371429.1;Name=WP_023371429.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037804.1;locus_tag=LIO31_RS08520;product=excinuclease ABC subunit UvrA;protein_id=WP_023371429.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1693550 1694494 . + . ID=gene-LIO31_RS08525;Name=LIO31_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08525 NZ_CP085086.1 Protein Homology CDS 1693550 1694494 . + 0 ID=cds-WP_002939248.1;Parent=gene-LIO31_RS08525;Dbxref=Genbank:WP_002939248.1;Name=WP_002939248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250490.1;locus_tag=LIO31_RS08525;product=magnesium transporter CorA family protein;protein_id=WP_002939248.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1694510 1695166 . + . ID=gene-LIO31_RS08530;Name=LIO31_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08530 NZ_CP085086.1 Protein Homology CDS 1694510 1695166 . + 0 ID=cds-WP_002939249.1;Parent=gene-LIO31_RS08530;Dbxref=Genbank:WP_002939249.1;Name=WP_002939249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736330.1;locus_tag=LIO31_RS08530;product=DUF1129 domain-containing protein;protein_id=WP_002939249.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1695550 1695789 . - . ID=gene-LIO31_RS08535;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LIO31_RS08535 NZ_CP085086.1 Protein Homology CDS 1695550 1695789 . - 0 ID=cds-WP_002939250.1;Parent=gene-LIO31_RS08535;Dbxref=Genbank:WP_002939250.1;Name=WP_002939250.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=LIO31_RS08535;product=30S ribosomal protein S18;protein_id=WP_002939250.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1695822 1696316 . - . ID=gene-LIO31_RS08540;Name=LIO31_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08540 NZ_CP085086.1 Protein Homology CDS 1695822 1696316 . - 0 ID=cds-WP_002942409.1;Parent=gene-LIO31_RS08540;Dbxref=Genbank:WP_002942409.1;Name=WP_002942409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002261867.1;locus_tag=LIO31_RS08540;product=single-stranded DNA-binding protein;protein_id=WP_002942409.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1696328 1696618 . - . ID=gene-LIO31_RS08545;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LIO31_RS08545 NZ_CP085086.1 Protein Homology CDS 1696328 1696618 . - 0 ID=cds-WP_002942403.1;Parent=gene-LIO31_RS08545;Dbxref=Genbank:WP_002942403.1;Name=WP_002942403.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030687.1;locus_tag=LIO31_RS08545;product=30S ribosomal protein S6;protein_id=WP_002942403.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1696790 1697779 . - . ID=gene-LIO31_RS08550;Name=LIO31_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08550 NZ_CP085086.1 Protein Homology CDS 1696790 1697779 . - 0 ID=cds-WP_023371431.1;Parent=gene-LIO31_RS08550;Dbxref=Genbank:WP_023371431.1;Name=WP_023371431.1;Ontology_term=GO:0036211,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014677692.1;locus_tag=LIO31_RS08550;product=lipoate--protein ligase;protein_id=WP_023371431.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1697909 1699099 . + . ID=gene-LIO31_RS08555;Name=LIO31_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08555 NZ_CP085086.1 Protein Homology CDS 1697909 1699099 . + 0 ID=cds-WP_023371435.1;Parent=gene-LIO31_RS08555;Dbxref=Genbank:WP_023371435.1;Name=WP_023371435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027738.1;locus_tag=LIO31_RS08555;product=hypothetical protein;protein_id=WP_023371435.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1699151 1700911 . - . ID=gene-LIO31_RS08560;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LIO31_RS08560 NZ_CP085086.1 Protein Homology CDS 1699151 1700911 . - 0 ID=cds-WP_024383854.1;Parent=gene-LIO31_RS08560;Dbxref=Genbank:WP_024383854.1;Name=WP_024383854.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984864.1;locus_tag=LIO31_RS08560;product=dihydrolipoyl dehydrogenase;protein_id=WP_024383854.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1701181 1702569 . - . ID=gene-LIO31_RS08565;Name=LIO31_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08565 NZ_CP085086.1 Protein Homology CDS 1701181 1702569 . - 0 ID=cds-WP_023371441.1;Parent=gene-LIO31_RS08565;Dbxref=Genbank:WP_023371441.1;Name=WP_023371441.1;Ontology_term=GO:0006086,GO:0016746,GO:0045254;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885106.1;locus_tag=LIO31_RS08565;product=dihydrolipoamide acetyltransferase;protein_id=WP_023371441.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1702910 1703905 . - . ID=gene-LIO31_RS08570;Name=LIO31_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08570 NZ_CP085086.1 Protein Homology CDS 1702910 1703905 . - 0 ID=cds-WP_023371443.1;Parent=gene-LIO31_RS08570;Dbxref=Genbank:WP_023371443.1;Name=WP_023371443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942393.1;locus_tag=LIO31_RS08570;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_023371443.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1704192 1705160 . - . ID=gene-LIO31_RS08575;Name=LIO31_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08575 NZ_CP085086.1 Protein Homology CDS 1704192 1705160 . - 0 ID=cds-WP_012775325.1;Parent=gene-LIO31_RS08575;Dbxref=Genbank:WP_012775325.1;Name=WP_012775325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258167.1;locus_tag=LIO31_RS08575;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_012775325.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1705393 1706052 . + . ID=gene-LIO31_RS08580;Name=LIO31_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08580 NZ_CP085086.1 Protein Homology CDS 1705393 1706052 . + 0 ID=cds-WP_023371445.1;Parent=gene-LIO31_RS08580;Dbxref=Genbank:WP_023371445.1;Name=WP_023371445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637160.1;locus_tag=LIO31_RS08580;product=trimeric intracellular cation channel family protein;protein_id=WP_023371445.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1706088 1707155 . - . ID=gene-LIO31_RS08585;Name=LIO31_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08585 NZ_CP085086.1 Protein Homology CDS 1706088 1707155 . - 0 ID=cds-WP_226960904.1;Parent=gene-LIO31_RS08585;Dbxref=Genbank:WP_226960904.1;Name=WP_226960904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637161.1;locus_tag=LIO31_RS08585;product=carbohydrate-binding domain-containing protein;protein_id=WP_226960904.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1707320 1707991 . - . ID=gene-LIO31_RS08590;Name=LIO31_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08590 NZ_CP085086.1 Protein Homology CDS 1707320 1707991 . - 0 ID=cds-WP_012775328.1;Parent=gene-LIO31_RS08590;Dbxref=Genbank:WP_012775328.1;Name=WP_012775328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775328.1;locus_tag=LIO31_RS08590;product=lipoprotein;protein_id=WP_012775328.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1708273 1708626 . - . ID=gene-LIO31_RS08595;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LIO31_RS08595 NZ_CP085086.1 Protein Homology CDS 1708273 1708626 . - 0 ID=cds-WP_012775329.1;Parent=gene-LIO31_RS08595;Dbxref=Genbank:WP_012775329.1;Name=WP_012775329.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942382.1;locus_tag=LIO31_RS08595;product=30S ribosome-binding factor RbfA;protein_id=WP_012775329.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1708782 1711604 . - . ID=gene-LIO31_RS08600;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LIO31_RS08600 NZ_CP085086.1 Protein Homology CDS 1708782 1711604 . - 0 ID=cds-WP_074389746.1;Parent=gene-LIO31_RS08600;Dbxref=Genbank:WP_074389746.1;Name=WP_074389746.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896915.1;locus_tag=LIO31_RS08600;product=translation initiation factor IF-2;protein_id=WP_074389746.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1711622 1711930 . - . ID=gene-LIO31_RS08605;Name=LIO31_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08605 NZ_CP085086.1 Protein Homology CDS 1711622 1711930 . - 0 ID=cds-WP_002942377.1;Parent=gene-LIO31_RS08605;Dbxref=Genbank:WP_002942377.1;Name=WP_002942377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942377.1;locus_tag=LIO31_RS08605;product=YlxQ-related RNA-binding protein;protein_id=WP_002942377.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1711917 1712213 . - . ID=gene-LIO31_RS08610;Name=LIO31_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08610 NZ_CP085086.1 Protein Homology CDS 1711917 1712213 . - 0 ID=cds-WP_002942375.1;Parent=gene-LIO31_RS08610;Dbxref=Genbank:WP_002942375.1;Name=WP_002942375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006531117.1;locus_tag=LIO31_RS08610;product=YlxR family protein;protein_id=WP_002942375.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1712230 1713372 . - . ID=gene-LIO31_RS08615;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LIO31_RS08615 NZ_CP085086.1 Protein Homology CDS 1712230 1713372 . - 0 ID=cds-WP_004194726.1;Parent=gene-LIO31_RS08615;Dbxref=Genbank:WP_004194726.1;Name=WP_004194726.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194726.1;locus_tag=LIO31_RS08615;product=transcription termination factor NusA;protein_id=WP_004194726.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1713446 1713916 . - . ID=gene-LIO31_RS08620;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LIO31_RS08620 NZ_CP085086.1 Protein Homology CDS 1713446 1713916 . - 0 ID=cds-WP_002942369.1;Parent=gene-LIO31_RS08620;Dbxref=Genbank:WP_002942369.1;Name=WP_002942369.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942369.1;locus_tag=LIO31_RS08620;product=ribosome maturation factor RimP;protein_id=WP_002942369.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1714487 1715125 . - . ID=gene-LIO31_RS08625;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LIO31_RS08625 NZ_CP085086.1 Protein Homology CDS 1714487 1715125 . - 0 ID=cds-WP_002939002.1;Parent=gene-LIO31_RS08625;Dbxref=Genbank:WP_002939002.1;Name=WP_002939002.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939002.1;locus_tag=LIO31_RS08625;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002939002.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1715122 1715916 . - . ID=gene-LIO31_RS08630;Name=LIO31_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08630 NZ_CP085086.1 Protein Homology CDS 1715122 1715916 . - 0 ID=cds-WP_002942360.1;Parent=gene-LIO31_RS08630;Dbxref=Genbank:WP_002942360.1;Name=WP_002942360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942360.1;locus_tag=LIO31_RS08630;product=phosphotransferase family protein;protein_id=WP_002942360.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1715966 1717006 . - . ID=gene-LIO31_RS08635;Name=LIO31_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08635 NZ_CP085086.1 Protein Homology CDS 1715966 1717006 . - 0 ID=cds-WP_012775685.1;Parent=gene-LIO31_RS08635;Dbxref=Genbank:WP_012775685.1;Name=WP_012775685.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638607.1;locus_tag=LIO31_RS08635;product=ABC transporter permease;protein_id=WP_012775685.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1717003 1717737 . - . ID=gene-LIO31_RS08640;Name=LIO31_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08640 NZ_CP085086.1 Protein Homology CDS 1717003 1717737 . - 0 ID=cds-WP_012027751.1;Parent=gene-LIO31_RS08640;Dbxref=Genbank:WP_012027751.1;Name=WP_012027751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942356.1;locus_tag=LIO31_RS08640;product=ABC transporter ATP-binding protein;protein_id=WP_012027751.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1717800 1718213 . + . ID=gene-LIO31_RS08645;Name=LIO31_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08645 NZ_CP085086.1 Protein Homology CDS 1717800 1718213 . + 0 ID=cds-WP_012027752.1;Parent=gene-LIO31_RS08645;Dbxref=Genbank:WP_012027752.1;Name=WP_012027752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939203.1;locus_tag=LIO31_RS08645;product=HIT family protein;protein_id=WP_012027752.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1718215 1718517 . + . ID=gene-LIO31_RS08650;Name=LIO31_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08650 NZ_CP085086.1 Protein Homology CDS 1718215 1718517 . + 0 ID=cds-WP_012027753.1;Parent=gene-LIO31_RS08650;Dbxref=Genbank:WP_012027753.1;Name=WP_012027753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027753.1;locus_tag=LIO31_RS08650;product=methyl-accepting chemotaxis protein;protein_id=WP_012027753.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1718626 1719819 . - . ID=gene-LIO31_RS08655;Name=LIO31_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08655 NZ_CP085086.1 Protein Homology CDS 1718626 1719819 . - 0 ID=cds-WP_012027754.1;Parent=gene-LIO31_RS08655;Dbxref=Genbank:WP_012027754.1;Name=WP_012027754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027754.1;locus_tag=LIO31_RS08655;product=LCP family protein;protein_id=WP_012027754.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1719816 1720343 . - . ID=gene-LIO31_RS08660;Name=LIO31_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08660 NZ_CP085086.1 Protein Homology CDS 1719816 1720343 . - 0 ID=cds-WP_012775687.1;Parent=gene-LIO31_RS08660;Dbxref=Genbank:WP_012775687.1;Name=WP_012775687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939196.1;locus_tag=LIO31_RS08660;product=GNAT family N-acetyltransferase;protein_id=WP_012775687.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1720336 1720812 . - . ID=gene-LIO31_RS08665;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LIO31_RS08665 NZ_CP085086.1 Protein Homology CDS 1720336 1720812 . - 0 ID=cds-WP_170240106.1;Parent=gene-LIO31_RS08665;Dbxref=Genbank:WP_170240106.1;Name=WP_170240106.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939195.1;locus_tag=LIO31_RS08665;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_170240106.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1720877 1722541 . - . ID=gene-LIO31_RS08670;Name=LIO31_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08670 NZ_CP085086.1 Protein Homology CDS 1720877 1722541 . - 0 ID=cds-WP_024405937.1;Parent=gene-LIO31_RS08670;Dbxref=Genbank:WP_024405937.1;Name=WP_024405937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193336.1;locus_tag=LIO31_RS08670;product=DAK2 domain-containing protein;protein_id=WP_024405937.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1722544 1722909 . - . ID=gene-LIO31_RS08675;Name=LIO31_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08675 NZ_CP085086.1 Protein Homology CDS 1722544 1722909 . - 0 ID=cds-WP_002939192.1;Parent=gene-LIO31_RS08675;Dbxref=Genbank:WP_002939192.1;Name=WP_002939192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=LIO31_RS08675;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_002939192.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1723153 1724434 . + . ID=gene-LIO31_RS08680;Name=LIO31_RS08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS08680;pseudo=true NZ_CP085086.1 Protein Homology CDS 1723153 1724434 . + 0 ID=cds-LIO31_RS08680;Parent=gene-LIO31_RS08680;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS08680;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1724643 1725545 . - . ID=gene-LIO31_RS08685;Name=LIO31_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08685 NZ_CP085086.1 Protein Homology CDS 1724643 1725545 . - 0 ID=cds-WP_002938141.1;Parent=gene-LIO31_RS08685;Dbxref=Genbank:WP_002938141.1;Name=WP_002938141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730558.1;locus_tag=LIO31_RS08685;product=ABC transporter permease;protein_id=WP_002938141.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1725559 1726515 . - . ID=gene-LIO31_RS08690;Name=LIO31_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08690 NZ_CP085086.1 Protein Homology CDS 1725559 1726515 . - 0 ID=cds-WP_002938143.1;Parent=gene-LIO31_RS08690;Dbxref=Genbank:WP_002938143.1;Name=WP_002938143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750774.1;locus_tag=LIO31_RS08690;product=ABC transporter permease;protein_id=WP_002938143.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1726517 1727461 . - . ID=gene-LIO31_RS08695;Name=LIO31_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08695 NZ_CP085086.1 Protein Homology CDS 1726517 1727461 . - 0 ID=cds-WP_024376439.1;Parent=gene-LIO31_RS08695;Dbxref=Genbank:WP_024376439.1;Name=WP_024376439.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027759.1;locus_tag=LIO31_RS08695;product=ATP-binding cassette domain-containing protein;protein_id=WP_024376439.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1727461 1728459 . - . ID=gene-LIO31_RS08700;Name=LIO31_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08700 NZ_CP085086.1 Protein Homology CDS 1727461 1728459 . - 0 ID=cds-WP_002942324.1;Parent=gene-LIO31_RS08700;Dbxref=Genbank:WP_002942324.1;Name=WP_002942324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942324.1;locus_tag=LIO31_RS08700;product=ABC transporter ATP-binding protein;protein_id=WP_002942324.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1728845 1730635 . - . ID=gene-LIO31_RS08705;Name=LIO31_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08705 NZ_CP085086.1 Protein Homology CDS 1728845 1730635 . - 0 ID=cds-WP_024381045.1;Parent=gene-LIO31_RS08705;Dbxref=Genbank:WP_024381045.1;Name=WP_024381045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917310.1;locus_tag=LIO31_RS08705;product=oligopeptide ABC transporter substrate-binding protein;protein_id=WP_024381045.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1730848 1732089 . + . ID=gene-LIO31_RS08710;Name=pbp3;gbkey=Gene;gene=pbp3;gene_biotype=protein_coding;locus_tag=LIO31_RS08710 NZ_CP085086.1 Protein Homology CDS 1730848 1732089 . + 0 ID=cds-WP_023371474.1;Parent=gene-LIO31_RS08710;Dbxref=Genbank:WP_023371474.1;Name=WP_023371474.1;gbkey=CDS;gene=pbp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647353.1;locus_tag=LIO31_RS08710;product=D-alanyl-D-alanine carboxypeptidase PBP3;protein_id=WP_023371474.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1732342 1733757 . - . ID=gene-LIO31_RS08715;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LIO31_RS08715 NZ_CP085086.1 Protein Homology CDS 1732342 1733757 . - 0 ID=cds-WP_002938151.1;Parent=gene-LIO31_RS08715;Dbxref=Genbank:WP_002938151.1;Name=WP_002938151.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397186.1;locus_tag=LIO31_RS08715;product=Fe-S cluster assembly protein SufB;protein_id=WP_002938151.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1734107 1734547 . - . ID=gene-LIO31_RS08720;Name=LIO31_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08720 NZ_CP085086.1 Protein Homology CDS 1734107 1734547 . - 0 ID=cds-WP_226960905.1;Parent=gene-LIO31_RS08720;Dbxref=Genbank:WP_226960905.1;Name=WP_226960905.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775691.1;locus_tag=LIO31_RS08720;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=WP_226960905.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1734534 1735757 . - . ID=gene-LIO31_RS08725;Name=LIO31_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08725 NZ_CP085086.1 Protein Homology CDS 1734534 1735757 . - 0 ID=cds-WP_012027766.1;Parent=gene-LIO31_RS08725;Dbxref=Genbank:WP_012027766.1;Name=WP_012027766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020754.1;locus_tag=LIO31_RS08725;product=cysteine desulfurase;protein_id=WP_012027766.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1735761 1737023 . - . ID=gene-LIO31_RS08730;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LIO31_RS08730 NZ_CP085086.1 Protein Homology CDS 1735761 1737023 . - 0 ID=cds-WP_012775333.1;Parent=gene-LIO31_RS08730;Dbxref=Genbank:WP_012775333.1;Name=WP_012775333.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013989976.1;locus_tag=LIO31_RS08730;product=Fe-S cluster assembly protein SufD;protein_id=WP_012775333.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1737040 1737813 . - . ID=gene-LIO31_RS08735;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LIO31_RS08735 NZ_CP085086.1 Protein Homology CDS 1737040 1737813 . - 0 ID=cds-WP_002938165.1;Parent=gene-LIO31_RS08735;Dbxref=Genbank:WP_002938165.1;Name=WP_002938165.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942293.1;locus_tag=LIO31_RS08735;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002938165.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1738274 1739446 . - . ID=gene-LIO31_RS08740;Name=LIO31_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08740 NZ_CP085086.1 Protein Homology CDS 1738274 1739446 . - 0 ID=cds-WP_012027769.1;Parent=gene-LIO31_RS08740;Dbxref=Genbank:WP_012027769.1;Name=WP_012027769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306490.1;locus_tag=LIO31_RS08740;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_012027769.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1739443 1740165 . - . ID=gene-LIO31_RS08745;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=LIO31_RS08745 NZ_CP085086.1 Protein Homology CDS 1739443 1740165 . - 0 ID=cds-WP_012775334.1;Parent=gene-LIO31_RS08745;Dbxref=Genbank:WP_012775334.1;Name=WP_012775334.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775334.1;locus_tag=LIO31_RS08745;product=adaptor protein MecA;protein_id=WP_012775334.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1740293 1741129 . - . ID=gene-LIO31_RS08750;Name=LIO31_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08750 NZ_CP085086.1 Protein Homology CDS 1740293 1741129 . - 0 ID=cds-WP_012027770.1;Parent=gene-LIO31_RS08750;Dbxref=Genbank:WP_012027770.1;Name=WP_012027770.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938173.1;locus_tag=LIO31_RS08750;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_012027770.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1741256 1742821 . + . ID=gene-LIO31_RS08755;Name=LIO31_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08755 NZ_CP085086.1 Protein Homology CDS 1741256 1742821 . + 0 ID=cds-WP_024405930.1;Parent=gene-LIO31_RS08755;Dbxref=Genbank:WP_024405930.1;Name=WP_024405930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028491.1;locus_tag=LIO31_RS08755;product=ABC transporter substrate-binding protein/permease;protein_id=WP_024405930.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1742814 1743557 . + . ID=gene-LIO31_RS08760;Name=LIO31_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08760 NZ_CP085086.1 Protein Homology CDS 1742814 1743557 . + 0 ID=cds-WP_024389055.1;Parent=gene-LIO31_RS08760;Dbxref=Genbank:WP_024389055.1;Name=WP_024389055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886432.1;locus_tag=LIO31_RS08760;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_024389055.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1743682 1743891 . - . ID=gene-LIO31_RS08765;Name=LIO31_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08765 NZ_CP085086.1 Protein Homology CDS 1743682 1743891 . - 0 ID=cds-WP_009910800.1;Parent=gene-LIO31_RS08765;Dbxref=Genbank:WP_009910800.1;Name=WP_009910800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910800.1;locus_tag=LIO31_RS08765;product=hypothetical protein;protein_id=WP_009910800.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1743977 1744879 . - . ID=gene-LIO31_RS08770;Name=LIO31_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08770 NZ_CP085086.1 Protein Homology CDS 1743977 1744879 . - 0 ID=cds-WP_012027774.1;Parent=gene-LIO31_RS08770;Dbxref=Genbank:WP_012027774.1;Name=WP_012027774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027774.1;locus_tag=LIO31_RS08770;product=SPFH domain-containing protein;protein_id=WP_012027774.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1744889 1746139 . - . ID=gene-LIO31_RS08775;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LIO31_RS08775 NZ_CP085086.1 Protein Homology CDS 1744889 1746139 . - 0 ID=cds-WP_002937416.1;Parent=gene-LIO31_RS08775;Dbxref=Genbank:WP_002937416.1;Name=WP_002937416.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019322143.1;locus_tag=LIO31_RS08775;product=threonine ammonia-lyase IlvA;protein_id=WP_002937416.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1746422 1747444 . - . ID=gene-LIO31_RS08780;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LIO31_RS08780 NZ_CP085086.1 Protein Homology CDS 1746422 1747444 . - 0 ID=cds-WP_024405928.1;Parent=gene-LIO31_RS08780;Dbxref=Genbank:WP_024405928.1;Name=WP_024405928.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145054.1;locus_tag=LIO31_RS08780;product=ketol-acid reductoisomerase;protein_id=WP_024405928.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1747585 1748061 . - . ID=gene-LIO31_RS08785;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LIO31_RS08785 NZ_CP085086.1 Protein Homology CDS 1747585 1748061 . - 0 ID=cds-WP_009910805.1;Parent=gene-LIO31_RS08785;Dbxref=Genbank:WP_009910805.1;Name=WP_009910805.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=LIO31_RS08785;product=acetolactate synthase small subunit;protein_id=WP_009910805.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1748054 1749757 . - . ID=gene-LIO31_RS08790;Name=LIO31_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08790 NZ_CP085086.1 Protein Homology CDS 1748054 1749757 . - 0 ID=cds-WP_012775336.1;Parent=gene-LIO31_RS08790;Dbxref=Genbank:WP_012775336.1;Name=WP_012775336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803125.1;locus_tag=LIO31_RS08790;product=acetolactate synthase large subunit;protein_id=WP_012775336.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1749982 1751034 . + . ID=gene-LIO31_RS08795;Name=LIO31_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08795 NZ_CP085086.1 Protein Homology CDS 1749982 1751034 . + 0 ID=cds-WP_014917313.1;Parent=gene-LIO31_RS08795;Dbxref=Genbank:WP_014917313.1;Name=WP_014917313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917313.1;locus_tag=LIO31_RS08795;product=bifunctional glycosyltransferase family 2/GtrA family protein;protein_id=WP_014917313.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1751021 1751959 . + . ID=gene-LIO31_RS08800;Name=LIO31_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08800 NZ_CP085086.1 Protein Homology CDS 1751021 1751959 . + 0 ID=cds-WP_012027778.1;Parent=gene-LIO31_RS08800;Dbxref=Genbank:WP_012027778.1;Name=WP_012027778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002918105.1;locus_tag=LIO31_RS08800;product=phosphodiester glycosidase family protein;protein_id=WP_012027778.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1751934 1752350 . + . ID=gene-LIO31_RS08805;Name=LIO31_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08805 NZ_CP085086.1 Protein Homology CDS 1751934 1752350 . + 0 ID=cds-WP_012775337.1;Parent=gene-LIO31_RS08805;Dbxref=Genbank:WP_012775337.1;Name=WP_012775337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775337.1;locus_tag=LIO31_RS08805;product=hypothetical protein;protein_id=WP_012775337.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1752511 1754226 . + . ID=gene-LIO31_RS08810;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LIO31_RS08810 NZ_CP085086.1 Protein Homology CDS 1752511 1754226 . + 0 ID=cds-WP_002937428.1;Parent=gene-LIO31_RS08810;Dbxref=Genbank:WP_002937428.1;Name=WP_002937428.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736370.1;locus_tag=LIO31_RS08810;product=dihydroxy-acid dehydratase;protein_id=WP_002937428.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1754277 1754672 . + . ID=gene-LIO31_RS08815;Name=LIO31_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08815 NZ_CP085086.1 Protein Homology CDS 1754277 1754672 . + 0 ID=cds-WP_012027779.1;Parent=gene-LIO31_RS08815;Dbxref=Genbank:WP_012027779.1;Name=WP_012027779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027779.1;locus_tag=LIO31_RS08815;product=DUF6176 family protein;protein_id=WP_012027779.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1754691 1755032 . - . ID=gene-LIO31_RS08820;Name=LIO31_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08820 NZ_CP085086.1 Protein Homology CDS 1754691 1755032 . - 0 ID=cds-WP_012027780.1;Parent=gene-LIO31_RS08820;Dbxref=Genbank:WP_012027780.1;Name=WP_012027780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003080443.1;locus_tag=LIO31_RS08820;product=metal-sulfur cluster assembly factor;protein_id=WP_012027780.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1755123 1755558 . - . ID=gene-LIO31_RS08825;Name=LIO31_RS08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS08825;pseudo=true NZ_CP085086.1 Protein Homology CDS 1755123 1755558 . - 0 ID=cds-LIO31_RS08825;Parent=gene-LIO31_RS08825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003104970.1;locus_tag=LIO31_RS08825;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1755809 1756279 . + . ID=gene-LIO31_RS08830;Name=LIO31_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08830 NZ_CP085086.1 Protein Homology CDS 1755809 1756279 . + 0 ID=cds-WP_024405913.1;Parent=gene-LIO31_RS08830;Dbxref=Genbank:WP_024405913.1;Name=WP_024405913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013851449.1;locus_tag=LIO31_RS08830;product=hypothetical protein;protein_id=WP_024405913.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1756367 1757686 . + . ID=gene-LIO31_RS08835;Name=LIO31_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08835 NZ_CP085086.1 Protein Homology CDS 1756367 1757686 . + 0 ID=cds-WP_024405912.1;Parent=gene-LIO31_RS08835;Dbxref=Genbank:WP_024405912.1;Name=WP_024405912.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476106.1;locus_tag=LIO31_RS08835;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_024405912.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1757776 1758090 . + . ID=gene-LIO31_RS08840;Name=LIO31_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08840 NZ_CP085086.1 Protein Homology CDS 1757776 1758090 . + 0 ID=cds-WP_024405911.1;Parent=gene-LIO31_RS08840;Dbxref=Genbank:WP_024405911.1;Name=WP_024405911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195544.1;locus_tag=LIO31_RS08840;product=hypothetical protein;protein_id=WP_024405911.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1758131 1758313 . + . ID=gene-LIO31_RS08845;Name=LIO31_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08845 NZ_CP085086.1 GeneMarkS-2+ CDS 1758131 1758313 . + 0 ID=cds-WP_142323547.1;Parent=gene-LIO31_RS08845;Dbxref=Genbank:WP_142323547.1;Name=WP_142323547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS08845;product=hypothetical protein;protein_id=WP_142323547.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1758276 1758833 . + . ID=gene-LIO31_RS08850;Name=LIO31_RS08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS08850;partial=true;pseudo=true;start_range=.,1758276 NZ_CP085086.1 Protein Homology CDS 1758276 1758833 . + 0 ID=cds-LIO31_RS08850;Parent=gene-LIO31_RS08850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014619928.1;locus_tag=LIO31_RS08850;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1758276;transl_table=11 NZ_CP085086.1 RefSeq gene 1759264 1760706 . - . ID=gene-LIO31_RS08855;Name=LIO31_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08855 NZ_CP085086.1 GeneMarkS-2+ CDS 1759264 1760706 . - 0 ID=cds-WP_226960413.1;Parent=gene-LIO31_RS08855;Dbxref=Genbank:WP_226960413.1;Name=WP_226960413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS08855;product=hypothetical protein;protein_id=WP_226960413.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1760720 1761142 . - . ID=gene-LIO31_RS08860;Name=LIO31_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08860 NZ_CP085086.1 Protein Homology CDS 1760720 1761142 . - 0 ID=cds-WP_226960414.1;Parent=gene-LIO31_RS08860;Dbxref=Genbank:WP_226960414.1;Name=WP_226960414.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.2;locus_tag=LIO31_RS08860;product=DEAD/DEAH box helicase family protein;protein_id=WP_226960414.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1761279 1762712 . - . ID=gene-LIO31_RS08865;Name=LIO31_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08865 NZ_CP085086.1 Protein Homology CDS 1761279 1762712 . - 0 ID=cds-WP_024405926.1;Parent=gene-LIO31_RS08865;Dbxref=Genbank:WP_024405926.1;Name=WP_024405926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077062.1;locus_tag=LIO31_RS08865;product=putative DNA binding domain-containing protein;protein_id=WP_024405926.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1762732 1765740 . - . ID=gene-LIO31_RS08870;Name=LIO31_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08870 NZ_CP085086.1 Protein Homology CDS 1762732 1765740 . - 0 ID=cds-WP_024405925.1;Parent=gene-LIO31_RS08870;Dbxref=Genbank:WP_024405925.1;Name=WP_024405925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000507062.1;locus_tag=LIO31_RS08870;product=type I restriction endonuclease subunit R;protein_id=WP_024405925.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1765770 1766270 . - . ID=gene-LIO31_RS08875;Name=LIO31_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08875 NZ_CP085086.1 Protein Homology CDS 1765770 1766270 . - 0 ID=cds-WP_024405924.1;Parent=gene-LIO31_RS08875;Dbxref=Genbank:WP_024405924.1;Name=WP_024405924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300456.1;locus_tag=LIO31_RS08875;product=TIR domain-containing protein;protein_id=WP_024405924.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1766270 1767097 . - . ID=gene-LIO31_RS08880;Name=LIO31_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08880 NZ_CP085086.1 Protein Homology CDS 1766270 1767097 . - 0 ID=cds-WP_074389687.1;Parent=gene-LIO31_RS08880;Dbxref=Genbank:WP_074389687.1;Name=WP_074389687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868610.1;locus_tag=LIO31_RS08880;product=DUF6430 domain-containing protein;protein_id=WP_074389687.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1767164 1767763 . + . ID=gene-LIO31_RS08885;Name=LIO31_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08885 NZ_CP085086.1 Protein Homology CDS 1767164 1767763 . + 0 ID=cds-WP_074393252.1;Parent=gene-LIO31_RS08885;Dbxref=Genbank:WP_074393252.1;Name=WP_074393252.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378836.1;locus_tag=LIO31_RS08885;product=restriction endonuclease subunit S;protein_id=WP_074393252.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1767748 1768284 . - . ID=gene-LIO31_RS08890;Name=LIO31_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08890 NZ_CP085086.1 Protein Homology CDS 1767748 1768284 . - 0 ID=cds-WP_074413324.1;Parent=gene-LIO31_RS08890;Dbxref=Genbank:WP_074413324.1;Name=WP_074413324.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906070.1;locus_tag=LIO31_RS08890;product=restriction endonuclease subunit S;protein_id=WP_074413324.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1768298 1769284 . - . ID=gene-LIO31_RS08895;Name=LIO31_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08895 NZ_CP085086.1 Protein Homology CDS 1768298 1769284 . - 0 ID=cds-WP_074412164.1;Parent=gene-LIO31_RS08895;Dbxref=Genbank:WP_074412164.1;Name=WP_074412164.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000653266.1;locus_tag=LIO31_RS08895;product=tyrosine-type recombinase/integrase;protein_id=WP_074412164.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1769351 1770481 . - . ID=gene-LIO31_RS08900;Name=LIO31_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08900 NZ_CP085086.1 Protein Homology CDS 1769351 1770481 . - 0 ID=cds-WP_074393254.1;Parent=gene-LIO31_RS08900;Dbxref=Genbank:WP_074393254.1;Name=WP_074393254.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017767891.1;locus_tag=LIO31_RS08900;product=restriction endonuclease subunit S;protein_id=WP_074393254.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1770471 1771976 . - . ID=gene-LIO31_RS08905;Name=LIO31_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08905 NZ_CP085086.1 Protein Homology CDS 1770471 1771976 . - 0 ID=cds-WP_024405918.1;Parent=gene-LIO31_RS08905;Dbxref=Genbank:WP_024405918.1;Name=WP_024405918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241218.1;locus_tag=LIO31_RS08905;product=type I restriction-modification system subunit M;protein_id=WP_024405918.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1772295 1772651 . - . ID=gene-LIO31_RS08910;Name=LIO31_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08910 NZ_CP085086.1 Protein Homology CDS 1772295 1772651 . - 0 ID=cds-WP_024405917.1;Parent=gene-LIO31_RS08910;Dbxref=Genbank:WP_024405917.1;Name=WP_024405917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046531.1;locus_tag=LIO31_RS08910;product=hypothetical protein;protein_id=WP_024405917.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1772648 1773004 . - . ID=gene-LIO31_RS08915;Name=LIO31_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08915 NZ_CP085086.1 Protein Homology CDS 1772648 1773004 . - 0 ID=cds-WP_074389691.1;Parent=gene-LIO31_RS08915;Dbxref=Genbank:WP_074389691.1;Name=WP_074389691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046529.1;locus_tag=LIO31_RS08915;product=transposase;protein_id=WP_074389691.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1772997 1773287 . - . ID=gene-LIO31_RS08920;Name=LIO31_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08920 NZ_CP085086.1 Protein Homology CDS 1772997 1773287 . - 0 ID=cds-WP_000158582.1;Parent=gene-LIO31_RS08920;Dbxref=Genbank:WP_000158582.1;Name=WP_000158582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158581.1;locus_tag=LIO31_RS08920;product=DUF5962 family protein;protein_id=WP_000158582.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1773298 1774152 . - . ID=gene-LIO31_RS08925;Name=LIO31_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08925 NZ_CP085086.1 Protein Homology CDS 1773298 1774152 . - 0 ID=cds-WP_024405915.1;Parent=gene-LIO31_RS08925;Dbxref=Genbank:WP_024405915.1;Name=WP_024405915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368155.1;locus_tag=LIO31_RS08925;product=phage replisome organizer N-terminal domain-containing protein;protein_id=WP_024405915.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1774164 1774448 . - . ID=gene-LIO31_RS08930;Name=LIO31_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08930 NZ_CP085086.1 Protein Homology CDS 1774164 1774448 . - 0 ID=cds-WP_001287945.1;Parent=gene-LIO31_RS08930;Dbxref=Genbank:WP_001287945.1;Name=WP_001287945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287945.1;locus_tag=LIO31_RS08930;product=hypothetical protein;protein_id=WP_001287945.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1774601 1775119 . + . ID=gene-LIO31_RS08935;Name=LIO31_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08935 NZ_CP085086.1 Protein Homology CDS 1774601 1775119 . + 0 ID=cds-WP_003046517.1;Parent=gene-LIO31_RS08935;Dbxref=Genbank:WP_003046517.1;Name=WP_003046517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181343.1;locus_tag=LIO31_RS08935;product=helix-turn-helix domain-containing protein;protein_id=WP_003046517.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1775174 1776328 . + . ID=gene-LIO31_RS08940;Name=LIO31_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08940 NZ_CP085086.1 Protein Homology CDS 1775174 1776328 . + 0 ID=cds-WP_074389692.1;Parent=gene-LIO31_RS08940;Dbxref=Genbank:WP_074389692.1;Name=WP_074389692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018378871.1;locus_tag=LIO31_RS08940;product=site-specific integrase;protein_id=WP_074389692.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1776460 1776852 . - . ID=gene-LIO31_RS08945;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LIO31_RS08945 NZ_CP085086.1 Protein Homology CDS 1776460 1776852 . - 0 ID=cds-WP_002942223.1;Parent=gene-LIO31_RS08945;Dbxref=Genbank:WP_002942223.1;Name=WP_002942223.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=LIO31_RS08945;product=30S ribosomal protein S9;protein_id=WP_002942223.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1776872 1777318 . - . ID=gene-LIO31_RS08950;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LIO31_RS08950 NZ_CP085086.1 Protein Homology CDS 1776872 1777318 . - 0 ID=cds-WP_002876943.1;Parent=gene-LIO31_RS08950;Dbxref=Genbank:WP_002876943.1;Name=WP_002876943.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=LIO31_RS08950;product=50S ribosomal protein L13;protein_id=WP_002876943.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1777783 1778646 . - . ID=gene-LIO31_RS08955;Name=LIO31_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08955 NZ_CP085086.1 Protein Homology CDS 1777783 1778646 . - 0 ID=cds-WP_074389693.1;Parent=gene-LIO31_RS08955;Dbxref=Genbank:WP_074389693.1;Name=WP_074389693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647387.1;locus_tag=LIO31_RS08955;product=DegV family protein;protein_id=WP_074389693.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1778643 1779164 . - . ID=gene-LIO31_RS08960;Name=LIO31_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08960 NZ_CP085086.1 Protein Homology CDS 1778643 1779164 . - 0 ID=cds-WP_012027786.1;Parent=gene-LIO31_RS08960;Dbxref=Genbank:WP_012027786.1;Name=WP_012027786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647388.1;locus_tag=LIO31_RS08960;product=NYN domain-containing protein;protein_id=WP_012027786.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1779165 1779893 . - . ID=gene-LIO31_RS08965;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LIO31_RS08965 NZ_CP085086.1 Protein Homology CDS 1779165 1779893 . - 0 ID=cds-WP_012027787.1;Parent=gene-LIO31_RS08965;Dbxref=Genbank:WP_012027787.1;Name=WP_012027787.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027787.1;locus_tag=LIO31_RS08965;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_012027787.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1779949 1781166 . - . ID=gene-LIO31_RS08970;Name=LIO31_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08970 NZ_CP085086.1 Protein Homology CDS 1779949 1781166 . - 0 ID=cds-WP_012775338.1;Parent=gene-LIO31_RS08970;Dbxref=Genbank:WP_012775338.1;Name=WP_012775338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775338.1;locus_tag=LIO31_RS08970;product=PASTA domain-containing protein;protein_id=WP_012775338.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1781361 1781750 . + . ID=gene-LIO31_RS08975;Name=LIO31_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08975 NZ_CP085086.1 Protein Homology CDS 1781361 1781750 . + 0 ID=cds-WP_012027789.1;Parent=gene-LIO31_RS08975;Dbxref=Genbank:WP_012027789.1;Name=WP_012027789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730574.1;locus_tag=LIO31_RS08975;product=DUF1761 domain-containing protein;protein_id=WP_012027789.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1781825 1782793 . + . ID=gene-LIO31_RS08980;Name=LIO31_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08980 NZ_CP085086.1 Protein Homology CDS 1781825 1782793 . + 0 ID=cds-WP_012027790.1;Parent=gene-LIO31_RS08980;Dbxref=Genbank:WP_012027790.1;Name=WP_012027790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027790.1;locus_tag=LIO31_RS08980;product=aromatic acid exporter family protein;protein_id=WP_012027790.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1782790 1783008 . - . ID=gene-LIO31_RS08985;Name=LIO31_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08985 NZ_CP085086.1 Protein Homology CDS 1782790 1783008 . - 0 ID=cds-WP_226314408.1;Parent=gene-LIO31_RS08985;Dbxref=Genbank:WP_226314408.1;Name=WP_226314408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636137.1;locus_tag=LIO31_RS08985;product=hypothetical protein;protein_id=WP_226314408.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1783296 1784426 . - . ID=gene-LIO31_RS08990;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LIO31_RS08990 NZ_CP085086.1 Protein Homology CDS 1783296 1784426 . - 0 ID=cds-WP_012775339.1;Parent=gene-LIO31_RS08990;Dbxref=Genbank:WP_012775339.1;Name=WP_012775339.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942207.1;locus_tag=LIO31_RS08990;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_012775339.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1784662 1785522 . - . ID=gene-LIO31_RS08995;Name=LIO31_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS08995 NZ_CP085086.1 Protein Homology CDS 1784662 1785522 . - 0 ID=cds-WP_023371548.1;Parent=gene-LIO31_RS08995;Dbxref=Genbank:WP_023371548.1;Name=WP_023371548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736391.1;locus_tag=LIO31_RS08995;product=helix-turn-helix domain-containing protein;protein_id=WP_023371548.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1785535 1786827 . - . ID=gene-LIO31_RS09000;Name=LIO31_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09000 NZ_CP085086.1 Protein Homology CDS 1785535 1786827 . - 0 ID=cds-WP_024383938.1;Parent=gene-LIO31_RS09000;Dbxref=Genbank:WP_024383938.1;Name=WP_024383938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636508.1;locus_tag=LIO31_RS09000;product=response regulator transcription factor;protein_id=WP_024383938.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1786817 1788466 . - . ID=gene-LIO31_RS09005;Name=LIO31_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09005 NZ_CP085086.1 Protein Homology CDS 1786817 1788466 . - 0 ID=cds-WP_023371552.1;Parent=gene-LIO31_RS09005;Dbxref=Genbank:WP_023371552.1;Name=WP_023371552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636138.1;locus_tag=LIO31_RS09005;product=sensor histidine kinase;protein_id=WP_023371552.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1788463 1789068 . - . ID=gene-LIO31_RS09010;Name=LIO31_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09010 NZ_CP085086.1 Protein Homology CDS 1788463 1789068 . - 0 ID=cds-WP_074389695.1;Parent=gene-LIO31_RS09010;Dbxref=Genbank:WP_074389695.1;Name=WP_074389695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647397.1;locus_tag=LIO31_RS09010;product=DUF624 domain-containing protein;protein_id=WP_074389695.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1789461 1790942 . - . ID=gene-LIO31_RS09015;Name=LIO31_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09015 NZ_CP085086.1 Protein Homology CDS 1789461 1790942 . - 0 ID=cds-WP_074389696.1;Parent=gene-LIO31_RS09015;Dbxref=Genbank:WP_074389696.1;Name=WP_074389696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028506.1;locus_tag=LIO31_RS09015;product=ABC transporter substrate-binding protein;protein_id=WP_074389696.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1791012 1791935 . - . ID=gene-LIO31_RS09020;Name=LIO31_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09020 NZ_CP085086.1 Protein Homology CDS 1791012 1791935 . - 0 ID=cds-WP_012027800.1;Parent=gene-LIO31_RS09020;Dbxref=Genbank:WP_012027800.1;Name=WP_012027800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075101.1;locus_tag=LIO31_RS09020;product=carbohydrate ABC transporter permease;protein_id=WP_012027800.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1791945 1792874 . - . ID=gene-LIO31_RS09025;Name=LIO31_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09025 NZ_CP085086.1 Protein Homology CDS 1791945 1792874 . - 0 ID=cds-WP_024378273.1;Parent=gene-LIO31_RS09025;Dbxref=Genbank:WP_024378273.1;Name=WP_024378273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647399.1;locus_tag=LIO31_RS09025;product=sugar ABC transporter permease;protein_id=WP_024378273.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1793076 1794959 . - . ID=gene-LIO31_RS09030;Name=LIO31_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09030 NZ_CP085086.1 Protein Homology CDS 1793076 1794959 . - 0 ID=cds-WP_074389698.1;Parent=gene-LIO31_RS09030;Dbxref=Genbank:WP_074389698.1;Name=WP_074389698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775342.1;locus_tag=LIO31_RS09030;product=beta-N-acetylhexosaminidase;protein_id=WP_074389698.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1794969 1795835 . - . ID=gene-LIO31_RS09035;Name=LIO31_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09035 NZ_CP085086.1 Protein Homology CDS 1794969 1795835 . - 0 ID=cds-WP_074389699.1;Parent=gene-LIO31_RS09035;Dbxref=Genbank:WP_074389699.1;Name=WP_074389699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647401.1;locus_tag=LIO31_RS09035;product=ROK family protein;protein_id=WP_074389699.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1795816 1798488 . - . ID=gene-LIO31_RS09040;Name=LIO31_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09040 NZ_CP085086.1 Protein Homology CDS 1795816 1798488 . - 0 ID=cds-WP_012775344.1;Parent=gene-LIO31_RS09040;Dbxref=Genbank:WP_012775344.1;Name=WP_012775344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647402.1;locus_tag=LIO31_RS09040;product=alpha-mannosidase;protein_id=WP_012775344.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1798490 1799776 . - . ID=gene-LIO31_RS09045;Name=LIO31_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09045 NZ_CP085086.1 Protein Homology CDS 1798490 1799776 . - 0 ID=cds-WP_012027805.1;Parent=gene-LIO31_RS09045;Dbxref=Genbank:WP_012027805.1;Name=WP_012027805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647403.1;locus_tag=LIO31_RS09045;product=glycoside hydrolase family 125 protein;protein_id=WP_012027805.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1800023 1802152 . + . ID=gene-LIO31_RS09050;Name=LIO31_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09050 NZ_CP085086.1 Protein Homology CDS 1800023 1802152 . + 0 ID=cds-WP_012027806.1;Parent=gene-LIO31_RS09050;Dbxref=Genbank:WP_012027806.1;Name=WP_012027806.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027806.1;locus_tag=LIO31_RS09050;product=GH92 family glycosyl hydrolase;protein_id=WP_012027806.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1802204 1806679 . - . ID=gene-LIO31_RS09055;Name=LIO31_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09055 NZ_CP085086.1 Protein Homology CDS 1802204 1806679 . - 0 ID=cds-WP_074389701.1;Parent=gene-LIO31_RS09055;Dbxref=Genbank:WP_074389701.1;Name=WP_074389701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636140.1;locus_tag=LIO31_RS09055;product=bacterial Ig-like domain-containing protein;protein_id=WP_074389701.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1806925 1807323 . - . ID=gene-LIO31_RS09060;Name=LIO31_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09060 NZ_CP085086.1 Protein Homology CDS 1806925 1807323 . - 0 ID=cds-WP_044680149.1;Parent=gene-LIO31_RS09060;Dbxref=Genbank:WP_044680149.1;Name=WP_044680149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027808.1;locus_tag=LIO31_RS09060;product=Mini-ribonuclease 3;protein_id=WP_044680149.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1807316 1808659 . - . ID=gene-LIO31_RS09065;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LIO31_RS09065 NZ_CP085086.1 Protein Homology CDS 1807316 1808659 . - 0 ID=cds-WP_009910838.1;Parent=gene-LIO31_RS09065;Dbxref=Genbank:WP_009910838.1;Name=WP_009910838.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916477.1;locus_tag=LIO31_RS09065;product=cysteine--tRNA ligase;protein_id=WP_009910838.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1808670 1808855 . - . ID=gene-LIO31_RS09070;Name=LIO31_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09070 NZ_CP085086.1 Protein Homology CDS 1808670 1808855 . - 0 ID=cds-WP_009910840.1;Parent=gene-LIO31_RS09070;Dbxref=Genbank:WP_009910840.1;Name=WP_009910840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637177.1;locus_tag=LIO31_RS09070;product=hypothetical protein;protein_id=WP_009910840.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1808849 1809622 . - . ID=gene-LIO31_RS09075;Name=LIO31_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09075 NZ_CP085086.1 Protein Homology CDS 1808849 1809622 . - 0 ID=cds-WP_074389702.1;Parent=gene-LIO31_RS09075;Dbxref=Genbank:WP_074389702.1;Name=WP_074389702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638664.1;locus_tag=LIO31_RS09075;product=nucleoside phosphorylase;protein_id=WP_074389702.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1809637 1810254 . - . ID=gene-LIO31_RS09080;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LIO31_RS09080 NZ_CP085086.1 Protein Homology CDS 1809637 1810254 . - 0 ID=cds-WP_002938845.1;Parent=gene-LIO31_RS09080;Dbxref=Genbank:WP_002938845.1;Name=WP_002938845.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539958.1;locus_tag=LIO31_RS09080;product=serine O-acetyltransferase;protein_id=WP_002938845.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1810308 1812527 . - . ID=gene-LIO31_RS09085;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LIO31_RS09085 NZ_CP085086.1 Protein Homology CDS 1810308 1812527 . - 0 ID=cds-WP_002938847.1;Parent=gene-LIO31_RS09085;Dbxref=Genbank:WP_002938847.1;Name=WP_002938847.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027812.1;locus_tag=LIO31_RS09085;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_002938847.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1812690 1812815 . - . ID=gene-LIO31_RS10315;Name=LIO31_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10315 NZ_CP085086.1 GeneMarkS-2+ CDS 1812690 1812815 . - 0 ID=cds-WP_002938848.1;Parent=gene-LIO31_RS10315;Dbxref=Genbank:WP_002938848.1;Name=WP_002938848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS10315;product=hypothetical protein;protein_id=WP_002938848.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1812830 1813099 . - . ID=gene-LIO31_RS09090;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LIO31_RS09090 NZ_CP085086.1 Protein Homology CDS 1812830 1813099 . - 0 ID=cds-WP_002938849.1;Parent=gene-LIO31_RS09090;Dbxref=Genbank:WP_002938849.1;Name=WP_002938849.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=LIO31_RS09090;product=30S ribosomal protein S15;protein_id=WP_002938849.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1813354 1813995 . - . ID=gene-LIO31_RS09095;Name=LIO31_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09095 NZ_CP085086.1 Protein Homology CDS 1813354 1813995 . - 0 ID=cds-WP_002938850.1;Parent=gene-LIO31_RS09095;Dbxref=Genbank:WP_002938850.1;Name=WP_002938850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938850.1;locus_tag=LIO31_RS09095;product=ABC transporter ATP-binding protein;protein_id=WP_002938850.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1813988 1814734 . - . ID=gene-LIO31_RS09100;Name=LIO31_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09100 NZ_CP085086.1 Protein Homology CDS 1813988 1814734 . - 0 ID=cds-WP_225533344.1;Parent=gene-LIO31_RS09100;Dbxref=Genbank:WP_225533344.1;Name=WP_225533344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938851.1;locus_tag=LIO31_RS09100;product=hypothetical protein;protein_id=WP_225533344.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1815483 1816247 . - . ID=gene-LIO31_RS09105;Name=LIO31_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09105 NZ_CP085086.1 Protein Homology CDS 1815483 1816247 . - 0 ID=cds-WP_002938853.1;Parent=gene-LIO31_RS09105;Dbxref=Genbank:WP_002938853.1;Name=WP_002938853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938853.1;locus_tag=LIO31_RS09105;product=hypothetical protein;protein_id=WP_002938853.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1816332 1816742 . - . ID=gene-LIO31_RS09110;Name=LIO31_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09110 NZ_CP085086.1 Protein Homology CDS 1816332 1816742 . - 0 ID=cds-WP_013730575.1;Parent=gene-LIO31_RS09110;Dbxref=Genbank:WP_013730575.1;Name=WP_013730575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730575.1;locus_tag=LIO31_RS09110;product=hypothetical protein;protein_id=WP_013730575.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1817091 1818372 . + . ID=gene-LIO31_RS09115;Name=LIO31_RS09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS09115;pseudo=true NZ_CP085086.1 Protein Homology CDS 1817091 1818372 . + 0 ID=cds-LIO31_RS09115;Parent=gene-LIO31_RS09115;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS09115;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1818589 1819866 . - . ID=gene-LIO31_RS09120;Name=LIO31_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09120 NZ_CP085086.1 Protein Homology CDS 1818589 1819866 . - 0 ID=cds-WP_002938352.1;Parent=gene-LIO31_RS09120;Dbxref=Genbank:WP_002938352.1;Name=WP_002938352.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647412.1;locus_tag=LIO31_RS09120;product=NCS2 family nucleobase:cation symporter;protein_id=WP_002938352.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1820289 1820798 . - . ID=gene-LIO31_RS09125;Name=LIO31_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09125 NZ_CP085086.1 Protein Homology CDS 1820289 1820798 . - 0 ID=cds-WP_002938355.1;Parent=gene-LIO31_RS09125;Dbxref=Genbank:WP_002938355.1;Name=WP_002938355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938355.1;locus_tag=LIO31_RS09125;product=hypothetical protein;protein_id=WP_002938355.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1821200 1821928 . - . ID=gene-LIO31_RS09130;Name=LIO31_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09130 NZ_CP085086.1 Protein Homology CDS 1821200 1821928 . - 0 ID=cds-WP_002938364.1;Parent=gene-LIO31_RS09130;Dbxref=Genbank:WP_002938364.1;Name=WP_002938364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185339.1;locus_tag=LIO31_RS09130;product=rRNA pseudouridine synthase;protein_id=WP_002938364.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1821919 1822545 . - . ID=gene-LIO31_RS09135;Name=LIO31_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09135 NZ_CP085086.1 Protein Homology CDS 1821919 1822545 . - 0 ID=cds-WP_032532081.1;Parent=gene-LIO31_RS09135;Dbxref=Genbank:WP_032532081.1;Name=WP_032532081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938366.1;locus_tag=LIO31_RS09135;product=GNAT family N-acetyltransferase;protein_id=WP_032532081.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1822582 1823745 . - . ID=gene-LIO31_RS09140;Name=LIO31_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09140 NZ_CP085086.1 Protein Homology CDS 1822582 1823745 . - 0 ID=cds-WP_024403242.1;Parent=gene-LIO31_RS09140;Dbxref=Genbank:WP_024403242.1;Name=WP_024403242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910852.1;locus_tag=LIO31_RS09140;product=MFS transporter;protein_id=WP_024403242.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1823875 1824489 . + . ID=gene-LIO31_RS09145;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LIO31_RS09145 NZ_CP085086.1 Protein Homology CDS 1823875 1824489 . + 0 ID=cds-WP_012027828.1;Parent=gene-LIO31_RS09145;Dbxref=Genbank:WP_012027828.1;Name=WP_012027828.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938371.1;locus_tag=LIO31_RS09145;product=peptide deformylase;protein_id=WP_012027828.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1824678 1825463 . - . ID=gene-LIO31_RS09150;Name=LIO31_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09150 NZ_CP085086.1 Protein Homology CDS 1824678 1825463 . - 0 ID=cds-WP_012027829.1;Parent=gene-LIO31_RS09150;Dbxref=Genbank:WP_012027829.1;Name=WP_012027829.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=LIO31_RS09150;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_012027829.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1825523 1826116 . - . ID=gene-LIO31_RS09155;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LIO31_RS09155 NZ_CP085086.1 Protein Homology CDS 1825523 1826116 . - 0 ID=cds-WP_074389913.1;Parent=gene-LIO31_RS09155;Dbxref=Genbank:WP_074389913.1;Name=WP_074389913.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019768698.1;locus_tag=LIO31_RS09155;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_074389913.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1826116 1827507 . - . ID=gene-LIO31_RS09160;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LIO31_RS09160 NZ_CP085086.1 Protein Homology CDS 1826116 1827507 . - 0 ID=cds-WP_024383946.1;Parent=gene-LIO31_RS09160;Dbxref=Genbank:WP_024383946.1;Name=WP_024383946.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027831.1;locus_tag=LIO31_RS09160;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_024383946.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1827510 1828556 . - . ID=gene-LIO31_RS09165;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LIO31_RS09165 NZ_CP085086.1 Protein Homology CDS 1827510 1828556 . - 0 ID=cds-WP_023371613.1;Parent=gene-LIO31_RS09165;Dbxref=Genbank:WP_023371613.1;Name=WP_023371613.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027832.1;locus_tag=LIO31_RS09165;product=3-isopropylmalate dehydrogenase;protein_id=WP_023371613.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1828565 1830127 . - . ID=gene-LIO31_RS09170;Name=LIO31_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09170 NZ_CP085086.1 Protein Homology CDS 1828565 1830127 . - 0 ID=cds-WP_226960906.1;Parent=gene-LIO31_RS09170;Dbxref=Genbank:WP_226960906.1;Name=WP_226960906.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910861.1;locus_tag=LIO31_RS09170;product=2-isopropylmalate synthase;protein_id=WP_226960906.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1830838 1831071 . - . ID=gene-LIO31_RS09175;Name=LIO31_RS09175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS09175;pseudo=true NZ_CP085086.1 Protein Homology CDS 1830838 1831071 . - 0 ID=cds-LIO31_RS09175;Parent=gene-LIO31_RS09175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775350.1;locus_tag=LIO31_RS09175;product=GlsB/YeaQ/YmgE family stress response membrane protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1831130 1832371 . - . ID=gene-LIO31_RS09180;Name=LIO31_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09180 NZ_CP085086.1 Protein Homology CDS 1831130 1832371 . - 0 ID=cds-WP_023371619.1;Parent=gene-LIO31_RS09180;Dbxref=Genbank:WP_023371619.1;Name=WP_023371619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938399.1;locus_tag=LIO31_RS09180;product=aminopeptidase;protein_id=WP_023371619.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1832633 1833235 . - . ID=gene-LIO31_RS09185;Name=LIO31_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09185 NZ_CP085086.1 Protein Homology CDS 1832633 1833235 . - 0 ID=cds-WP_014736429.1;Parent=gene-LIO31_RS09185;Dbxref=Genbank:WP_014736429.1;Name=WP_014736429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012997947.1;locus_tag=LIO31_RS09185;product=nitroreductase family protein;protein_id=WP_014736429.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1833471 1834142 . - . ID=gene-LIO31_RS09190;Name=LIO31_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09190 NZ_CP085086.1 Protein Homology CDS 1833471 1834142 . - 0 ID=cds-WP_023371621.1;Parent=gene-LIO31_RS09190;Dbxref=Genbank:WP_023371621.1;Name=WP_023371621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938769.1;locus_tag=LIO31_RS09190;product=LemA family protein;protein_id=WP_023371621.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1834154 1838545 . - . ID=gene-LIO31_RS09195;Name=LIO31_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09195 NZ_CP085086.1 Protein Homology CDS 1834154 1838545 . - 0 ID=cds-WP_023371623.1;Parent=gene-LIO31_RS09195;Dbxref=Genbank:WP_023371623.1;Name=WP_023371623.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907973.1;locus_tag=LIO31_RS09195;product=PolC-type DNA polymerase III;protein_id=WP_023371623.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1838669 1839658 . - . ID=gene-LIO31_RS09200;Name=dhaQ;gbkey=Gene;gene=dhaQ;gene_biotype=protein_coding;locus_tag=LIO31_RS09200 NZ_CP085086.1 Protein Homology CDS 1838669 1839658 . - 0 ID=cds-WP_023371625.1;Parent=gene-LIO31_RS09200;Dbxref=Genbank:WP_023371625.1;Name=WP_023371625.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaQ;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647434.1;locus_tag=LIO31_RS09200;product=DhaKLM operon coactivator DhaQ;protein_id=WP_023371625.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1839669 1840214 . - . ID=gene-LIO31_RS09205;Name=dhaS;gbkey=Gene;gene=dhaS;gene_biotype=protein_coding;locus_tag=LIO31_RS09205 NZ_CP085086.1 Protein Homology CDS 1839669 1840214 . - 0 ID=cds-WP_023371627.1;Parent=gene-LIO31_RS09205;Dbxref=Genbank:WP_023371627.1;Name=WP_023371627.1;gbkey=CDS;gene=dhaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910868.1;locus_tag=LIO31_RS09205;product=dihydroxyacetone kinase transcriptional activator DhaS;protein_id=WP_023371627.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1840362 1841351 . + . ID=gene-LIO31_RS09210;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=LIO31_RS09210 NZ_CP085086.1 Protein Homology CDS 1840362 1841351 . + 0 ID=cds-WP_023371629.1;Parent=gene-LIO31_RS09210;Dbxref=Genbank:WP_023371629.1;Name=WP_023371629.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003772865.1;locus_tag=LIO31_RS09210;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_023371629.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1841362 1841937 . + . ID=gene-LIO31_RS09215;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=LIO31_RS09215 NZ_CP085086.1 Protein Homology CDS 1841362 1841937 . + 0 ID=cds-WP_023371632.1;Parent=gene-LIO31_RS09215;Dbxref=Genbank:WP_023371632.1;Name=WP_023371632.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638688.1;locus_tag=LIO31_RS09215;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_023371632.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1841934 1842308 . + . ID=gene-LIO31_RS09220;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=LIO31_RS09220 NZ_CP085086.1 Protein Homology CDS 1841934 1842308 . + 0 ID=cds-WP_023371633.1;Parent=gene-LIO31_RS09220;Dbxref=Genbank:WP_023371633.1;Name=WP_023371633.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002960428.1;locus_tag=LIO31_RS09220;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_023371633.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1842318 1843028 . + . ID=gene-LIO31_RS09225;Name=LIO31_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09225 NZ_CP085086.1 Protein Homology CDS 1842318 1843028 . + 0 ID=cds-WP_014736436.1;Parent=gene-LIO31_RS09225;Dbxref=Genbank:WP_014736436.1;Name=WP_014736436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003062665.1;locus_tag=LIO31_RS09225;product=aquaporin family protein;protein_id=WP_014736436.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1843108 1844970 . - . ID=gene-LIO31_RS09230;Name=LIO31_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09230 NZ_CP085086.1 Protein Homology CDS 1843108 1844970 . - 0 ID=cds-WP_024405894.1;Parent=gene-LIO31_RS09230;Dbxref=Genbank:WP_024405894.1;Name=WP_024405894.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910872.1;locus_tag=LIO31_RS09230;product=proline--tRNA ligase;protein_id=WP_024405894.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1845107 1846366 . - . ID=gene-LIO31_RS09235;Name=LIO31_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09235 NZ_CP085086.1 Protein Homology CDS 1845107 1846366 . - 0 ID=cds-WP_012027845.1;Parent=gene-LIO31_RS09235;Dbxref=Genbank:WP_012027845.1;Name=WP_012027845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938752.1;locus_tag=LIO31_RS09235;product=RIP metalloprotease;protein_id=WP_012027845.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1846376 1847182 . - . ID=gene-LIO31_RS09240;Name=LIO31_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09240 NZ_CP085086.1 Protein Homology CDS 1846376 1847182 . - 0 ID=cds-WP_012027846.1;Parent=gene-LIO31_RS09240;Dbxref=Genbank:WP_012027846.1;Name=WP_012027846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940117.1;locus_tag=LIO31_RS09240;product=phosphatidate cytidylyltransferase;protein_id=WP_012027846.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1847192 1847947 . - . ID=gene-LIO31_RS09245;Name=LIO31_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09245 NZ_CP085086.1 Protein Homology CDS 1847192 1847947 . - 0 ID=cds-WP_012775352.1;Parent=gene-LIO31_RS09245;Dbxref=Genbank:WP_012775352.1;Name=WP_012775352.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736440.1;locus_tag=LIO31_RS09245;product=isoprenyl transferase;protein_id=WP_012775352.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1848061 1848384 . - . ID=gene-LIO31_RS09250;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LIO31_RS09250 NZ_CP085086.1 Protein Homology CDS 1848061 1848384 . - 0 ID=cds-WP_012775696.1;Parent=gene-LIO31_RS09250;Dbxref=Genbank:WP_012775696.1;Name=WP_012775696.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736441.1;locus_tag=LIO31_RS09250;product=preprotein translocase subunit YajC;protein_id=WP_012775696.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1848494 1849786 . - . ID=gene-LIO31_RS09255;Name=LIO31_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09255 NZ_CP085086.1 Protein Homology CDS 1848494 1849786 . - 0 ID=cds-WP_012775353.1;Parent=gene-LIO31_RS09255;Dbxref=Genbank:WP_012775353.1;Name=WP_012775353.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937782.1;locus_tag=LIO31_RS09255;product=adenylosuccinate synthase;protein_id=WP_012775353.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1850151 1852382 . + . ID=gene-LIO31_RS09260;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=LIO31_RS09260 NZ_CP085086.1 Protein Homology CDS 1850151 1852382 . + 0 ID=cds-WP_012027850.1;Parent=gene-LIO31_RS09260;Dbxref=Genbank:WP_012027850.1;Name=WP_012027850.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910876.1;locus_tag=LIO31_RS09260;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=WP_012027850.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1853265 1856384 . + . ID=gene-LIO31_RS09265;Name=LIO31_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09265 NZ_CP085086.1 Protein Homology CDS 1853265 1856384 . + 0 ID=cds-WP_024383949.1;Parent=gene-LIO31_RS09265;Dbxref=Genbank:WP_024383949.1;Name=WP_024383949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636515.1;locus_tag=LIO31_RS09265;product=DUF6359 domain-containing protein;protein_id=WP_024383949.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1856464 1857330 . + . ID=gene-LIO31_RS09270;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LIO31_RS09270 NZ_CP085086.1 Protein Homology CDS 1856464 1857330 . + 0 ID=cds-WP_024383950.1;Parent=gene-LIO31_RS09270;Dbxref=Genbank:WP_024383950.1;Name=WP_024383950.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638696.1;locus_tag=LIO31_RS09270;product=Hsp33 family molecular chaperone HslO;protein_id=WP_024383950.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1857323 1858327 . + . ID=gene-LIO31_RS09275;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LIO31_RS09275 NZ_CP085086.1 Protein Homology CDS 1857323 1858327 . + 0 ID=cds-WP_023371647.1;Parent=gene-LIO31_RS09275;Dbxref=Genbank:WP_023371647.1;Name=WP_023371647.1;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647446.1;locus_tag=LIO31_RS09275;product=tRNA dihydrouridine synthase DusB;protein_id=WP_023371647.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1858428 1858919 . - . ID=gene-LIO31_RS09280;Name=LIO31_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09280 NZ_CP085086.1 Protein Homology CDS 1858428 1858919 . - 0 ID=cds-WP_023371649.1;Parent=gene-LIO31_RS09280;Dbxref=Genbank:WP_023371649.1;Name=WP_023371649.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910880.1;locus_tag=LIO31_RS09280;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_023371649.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1859013 1861463 . - . ID=gene-LIO31_RS09285;Name=LIO31_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09285 NZ_CP085086.1 Protein Homology CDS 1859013 1861463 . - 0 ID=cds-WP_023371651.1;Parent=gene-LIO31_RS09285;Dbxref=Genbank:WP_023371651.1;Name=WP_023371651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940141.1;locus_tag=LIO31_RS09285;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_023371651.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1861467 1861919 . - . ID=gene-LIO31_RS09290;Name=LIO31_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09290 NZ_CP085086.1 Protein Homology CDS 1861467 1861919 . - 0 ID=cds-WP_023371653.1;Parent=gene-LIO31_RS09290;Dbxref=Genbank:WP_023371653.1;Name=WP_023371653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730590.1;locus_tag=LIO31_RS09290;product=CtsR family transcriptional regulator;protein_id=WP_023371653.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1862087 1862446 . + . ID=gene-LIO31_RS09295;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=LIO31_RS09295 NZ_CP085086.1 Protein Homology CDS 1862087 1862446 . + 0 ID=cds-WP_023371655.1;Parent=gene-LIO31_RS09295;Dbxref=Genbank:WP_023371655.1;Name=WP_023371655.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730591.1;locus_tag=LIO31_RS09295;product=conjugal transfer protein TraF;protein_id=WP_023371655.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1862568 1864016 . - . ID=gene-LIO31_RS09305;Name=LIO31_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09305 NZ_CP085086.1 Protein Homology CDS 1862568 1864016 . - 0 ID=cds-WP_079845835.1;Parent=gene-LIO31_RS09305;Dbxref=Genbank:WP_079845835.1;Name=WP_079845835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017548.2;locus_tag=LIO31_RS09305;product=Cna B-type domain-containing protein;protein_id=WP_079845835.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1864071 1865210 . - . ID=gene-LIO31_RS09310;Name=LIO31_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09310 NZ_CP085086.1 Protein Homology CDS 1864071 1865210 . - 0 ID=cds-WP_024383931.1;Parent=gene-LIO31_RS09310;Dbxref=Genbank:WP_024383931.1;Name=WP_024383931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037690.2;locus_tag=LIO31_RS09310;product=Ig-like domain-containing protein;protein_id=WP_024383931.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1865502 1867442 . - . ID=gene-LIO31_RS09315;Name=LIO31_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09315 NZ_CP085086.1 Protein Homology CDS 1865502 1867442 . - 0 ID=cds-WP_023371657.1;Parent=gene-LIO31_RS09315;Dbxref=Genbank:WP_023371657.1;Name=WP_023371657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024296.2;locus_tag=LIO31_RS09315;product=Ig-like domain-containing protein;protein_id=WP_023371657.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1867797 1868837 . - . ID=gene-LIO31_RS09320;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LIO31_RS09320 NZ_CP085086.1 Protein Homology CDS 1867797 1868837 . - 0 ID=cds-WP_002937816.1;Parent=gene-LIO31_RS09320;Dbxref=Genbank:WP_002937816.1;Name=WP_002937816.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808079.1;locus_tag=LIO31_RS09320;product=translation elongation factor Ts;protein_id=WP_002937816.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1869090 1869866 . - . ID=gene-LIO31_RS09325;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LIO31_RS09325 NZ_CP085086.1 Protein Homology CDS 1869090 1869866 . - 0 ID=cds-WP_012775356.1;Parent=gene-LIO31_RS09325;Dbxref=Genbank:WP_012775356.1;Name=WP_012775356.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937818.1;locus_tag=LIO31_RS09325;product=30S ribosomal protein S2;protein_id=WP_012775356.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1870214 1870726 . - . ID=gene-LIO31_RS09330;Name=LIO31_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09330 NZ_CP085086.1 Protein Homology CDS 1870214 1870726 . - 0 ID=cds-WP_023371659.1;Parent=gene-LIO31_RS09330;Dbxref=Genbank:WP_023371659.1;Name=WP_023371659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028527.1;locus_tag=LIO31_RS09330;product=adenylate kinase;protein_id=WP_023371659.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1871267 1871337 . + . ID=gene-LIO31_RS09335;Name=LIO31_RS09335;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS09335 NZ_CP085086.1 tRNAscan-SE tRNA 1871267 1871337 . + . ID=rna-LIO31_RS09335;Parent=gene-LIO31_RS09335;anticodon=(pos:1871299..1871301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09335;product=tRNA-Cys NZ_CP085086.1 tRNAscan-SE exon 1871267 1871337 . + . ID=exon-LIO31_RS09335-1;Parent=rna-LIO31_RS09335;anticodon=(pos:1871299..1871301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09335;product=tRNA-Cys NZ_CP085086.1 RefSeq gene 1871380 1876431 . - . ID=gene-LIO31_RS09340;Name=LIO31_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09340 NZ_CP085086.1 Protein Homology CDS 1871380 1876431 . - 0 ID=cds-WP_074389915.1;Parent=gene-LIO31_RS09340;Dbxref=Genbank:WP_074389915.1;Name=WP_074389915.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027865.1;locus_tag=LIO31_RS09340;product=S8 family serine peptidase;protein_id=WP_074389915.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1876574 1877113 . - . ID=gene-LIO31_RS09345;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LIO31_RS09345 NZ_CP085086.1 Protein Homology CDS 1876574 1877113 . - 0 ID=cds-WP_023371663.1;Parent=gene-LIO31_RS09345;Dbxref=Genbank:WP_023371663.1;Name=WP_023371663.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940254.1;locus_tag=LIO31_RS09345;product=transcription termination/antitermination protein NusG;protein_id=WP_023371663.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1877223 1877399 . - . ID=gene-LIO31_RS09350;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LIO31_RS09350 NZ_CP085086.1 Protein Homology CDS 1877223 1877399 . - 0 ID=cds-WP_002940255.1;Parent=gene-LIO31_RS09350;Dbxref=Genbank:WP_002940255.1;Name=WP_002940255.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940255.1;locus_tag=LIO31_RS09350;product=preprotein translocase subunit SecE;protein_id=WP_002940255.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1877409 1877561 . - . ID=gene-LIO31_RS09355;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LIO31_RS09355 NZ_CP085086.1 Protein Homology CDS 1877409 1877561 . - 0 ID=cds-WP_002940258.1;Parent=gene-LIO31_RS09355;Dbxref=Genbank:WP_002940258.1;Name=WP_002940258.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912025.1;locus_tag=LIO31_RS09355;product=50S ribosomal protein L33;protein_id=WP_002940258.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1877595 1879808 . - . ID=gene-LIO31_RS09360;Name=pbp2a;gbkey=Gene;gene=pbp2a;gene_biotype=protein_coding;locus_tag=LIO31_RS09360 NZ_CP085086.1 Protein Homology CDS 1877595 1879808 . - 0 ID=cds-WP_023371665.1;Parent=gene-LIO31_RS09360;Dbxref=Genbank:WP_023371665.1;Name=WP_023371665.1;Ontology_term=GO:0008658;gbkey=CDS;gene=pbp2a;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647453.1;locus_tag=LIO31_RS09360;product=penicillin-binding protein PBP2A;protein_id=WP_023371665.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1879961 1880929 . + . ID=gene-LIO31_RS09365;Name=LIO31_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09365 NZ_CP085086.1 Protein Homology CDS 1879961 1880929 . + 0 ID=cds-WP_023371667.1;Parent=gene-LIO31_RS09365;Dbxref=Genbank:WP_023371667.1;Name=WP_023371667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081018.1;locus_tag=LIO31_RS09365;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_023371667.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1880931 1881797 . + . ID=gene-LIO31_RS09370;Name=LIO31_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09370 NZ_CP085086.1 Protein Homology CDS 1880931 1881797 . + 0 ID=cds-WP_074389916.1;Parent=gene-LIO31_RS09370;Dbxref=Genbank:WP_074389916.1;Name=WP_074389916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027870.1;locus_tag=LIO31_RS09370;product=RluA family pseudouridine synthase;protein_id=WP_074389916.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1881823 1882635 . - . ID=gene-LIO31_RS09375;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=LIO31_RS09375 NZ_CP085086.1 Protein Homology CDS 1881823 1882635 . - 0 ID=cds-WP_002938438.1;Parent=gene-LIO31_RS09375;Dbxref=Genbank:WP_002938438.1;Name=WP_002938438.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938438.1;locus_tag=LIO31_RS09375;product=pur operon repressor;protein_id=WP_002938438.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1882737 1883603 . - . ID=gene-LIO31_RS09380;Name=LIO31_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09380 NZ_CP085086.1 Protein Homology CDS 1882737 1883603 . - 0 ID=cds-WP_023371671.1;Parent=gene-LIO31_RS09380;Dbxref=Genbank:WP_023371671.1;Name=WP_023371671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938439.1;locus_tag=LIO31_RS09380;product=phosphotransferase;protein_id=WP_023371671.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1883603 1884544 . - . ID=gene-LIO31_RS09385;Name=LIO31_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09385 NZ_CP085086.1 Protein Homology CDS 1883603 1884544 . - 0 ID=cds-WP_074389917.1;Parent=gene-LIO31_RS09385;Dbxref=Genbank:WP_074389917.1;Name=WP_074389917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775359.1;locus_tag=LIO31_RS09385;product=3'-5' exoribonuclease YhaM family protein;protein_id=WP_074389917.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1884534 1885772 . - . ID=gene-LIO31_RS09390;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LIO31_RS09390 NZ_CP085086.1 Protein Homology CDS 1884534 1885772 . - 0 ID=cds-WP_012775699.1;Parent=gene-LIO31_RS09390;Dbxref=Genbank:WP_012775699.1;Name=WP_012775699.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647458.1;locus_tag=LIO31_RS09390;product=DNA recombination protein RmuC;protein_id=WP_012775699.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1885773 1886405 . - . ID=gene-LIO31_RS09395;Name=LIO31_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09395 NZ_CP085086.1 Protein Homology CDS 1885773 1886405 . - 0 ID=cds-WP_012027875.1;Parent=gene-LIO31_RS09395;Dbxref=Genbank:WP_012027875.1;Name=WP_012027875.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647459.1;locus_tag=LIO31_RS09395;product=thiamine diphosphokinase;protein_id=WP_012027875.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1886398 1887057 . - . ID=gene-LIO31_RS09400;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LIO31_RS09400 NZ_CP085086.1 Protein Homology CDS 1886398 1887057 . - 0 ID=cds-WP_012027876.1;Parent=gene-LIO31_RS09400;Dbxref=Genbank:WP_012027876.1;Name=WP_012027876.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893879.1;locus_tag=LIO31_RS09400;product=ribulose-phosphate 3-epimerase;protein_id=WP_012027876.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1887072 1887947 . - . ID=gene-LIO31_RS09405;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LIO31_RS09405 NZ_CP085086.1 Protein Homology CDS 1887072 1887947 . - 0 ID=cds-WP_023371679.1;Parent=gene-LIO31_RS09405;Dbxref=Genbank:WP_023371679.1;Name=WP_023371679.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940273.1;locus_tag=LIO31_RS09405;product=ribosome small subunit-dependent GTPase A;protein_id=WP_023371679.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1888343 1888424 . + . ID=gene-LIO31_RS09410;Name=LIO31_RS09410;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS09410 NZ_CP085086.1 tRNAscan-SE tRNA 1888343 1888424 . + . ID=rna-LIO31_RS09410;Parent=gene-LIO31_RS09410;anticodon=(pos:1888376..1888378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09410;product=tRNA-Leu NZ_CP085086.1 tRNAscan-SE exon 1888343 1888424 . + . ID=exon-LIO31_RS09410-1;Parent=rna-LIO31_RS09410;anticodon=(pos:1888376..1888378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09410;product=tRNA-Leu NZ_CP085086.1 RefSeq gene 1888844 1890421 . - . ID=gene-LIO31_RS09415;Name=LIO31_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09415 NZ_CP085086.1 Protein Homology CDS 1888844 1890421 . - 0 ID=cds-WP_012027878.1;Parent=gene-LIO31_RS09415;Dbxref=Genbank:WP_012027878.1;Name=WP_012027878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014637210.1;locus_tag=LIO31_RS09415;product=ABC transporter ATP-binding protein/permease;protein_id=WP_012027878.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1890418 1891071 . - . ID=gene-LIO31_RS09420;Name=LIO31_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09420 NZ_CP085086.1 GeneMarkS-2+ CDS 1890418 1891071 . - 0 ID=cds-WP_226960415.1;Parent=gene-LIO31_RS09420;Dbxref=Genbank:WP_226960415.1;Name=WP_226960415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS09420;product=hypothetical protein;protein_id=WP_226960415.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1891110 1891973 . - . ID=gene-LIO31_RS09425;Name=LIO31_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09425 NZ_CP085086.1 Protein Homology CDS 1891110 1891973 . - 0 ID=cds-WP_012027880.1;Parent=gene-LIO31_RS09425;Dbxref=Genbank:WP_012027880.1;Name=WP_012027880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027880.1;locus_tag=LIO31_RS09425;product=Rgg/GadR/MutR family transcriptional regulator;protein_id=WP_012027880.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1892463 1894907 . - . ID=gene-LIO31_RS09430;Name=LIO31_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09430 NZ_CP085086.1 Protein Homology CDS 1892463 1894907 . - 0 ID=cds-WP_023371681.1;Parent=gene-LIO31_RS09430;Dbxref=Genbank:WP_023371681.1;Name=WP_023371681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939005.1;locus_tag=LIO31_RS09430;product=LTA synthase family protein;protein_id=WP_023371681.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1894920 1896650 . - . ID=gene-LIO31_RS09435;Name=LIO31_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09435 NZ_CP085086.1 Protein Homology CDS 1894920 1896650 . - 0 ID=cds-WP_226960907.1;Parent=gene-LIO31_RS09435;Dbxref=Genbank:WP_226960907.1;Name=WP_226960907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775361.1;locus_tag=LIO31_RS09435;product=hypothetical protein;protein_id=WP_226960907.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1897013 1897885 . - . ID=gene-LIO31_RS09440;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LIO31_RS09440 NZ_CP085086.1 Protein Homology CDS 1897013 1897885 . - 0 ID=cds-WP_014736465.1;Parent=gene-LIO31_RS09440;Dbxref=Genbank:WP_014736465.1;Name=WP_014736465.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030634.1;locus_tag=LIO31_RS09440;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_014736465.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1897904 1898431 . - . ID=gene-LIO31_RS09445;Name=LIO31_RS09445;end_range=1898431,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS09445;partial=true;pseudo=true NZ_CP085086.1 Protein Homology CDS 1897904 1898431 . - 0 ID=cds-LIO31_RS09445;Parent=gene-LIO31_RS09445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1898431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736466.1;locus_tag=LIO31_RS09445;partial=true;product=DUF1697 domain-containing protein;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1898447 1898704 . - . ID=gene-LIO31_RS09450;Name=LIO31_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09450 NZ_CP085086.1 Protein Homology CDS 1898447 1898704 . - 0 ID=cds-WP_013730620.1;Parent=gene-LIO31_RS09450;Dbxref=Genbank:WP_013730620.1;Name=WP_013730620.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647467.1;locus_tag=LIO31_RS09450;product=Txe/YoeB family addiction module toxin;protein_id=WP_013730620.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1898706 1898966 . - . ID=gene-LIO31_RS09455;Name=LIO31_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09455 NZ_CP085086.1 Protein Homology CDS 1898706 1898966 . - 0 ID=cds-WP_002939010.1;Parent=gene-LIO31_RS09455;Dbxref=Genbank:WP_002939010.1;Name=WP_002939010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736468.1;locus_tag=LIO31_RS09455;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002939010.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1899042 1899497 . - . ID=gene-LIO31_RS09460;Name=LIO31_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09460 NZ_CP085086.1 Protein Homology CDS 1899042 1899497 . - 0 ID=cds-WP_012028534.1;Parent=gene-LIO31_RS09460;Dbxref=Genbank:WP_012028534.1;Name=WP_012028534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028534.1;locus_tag=LIO31_RS09460;product=8-oxo-dGTP diphosphatase;protein_id=WP_012028534.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1899504 1899833 . - . ID=gene-LIO31_RS09465;Name=LIO31_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09465 NZ_CP085086.1 Protein Homology CDS 1899504 1899833 . - 0 ID=cds-WP_012775364.1;Parent=gene-LIO31_RS09465;Dbxref=Genbank:WP_012775364.1;Name=WP_012775364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940309.1;locus_tag=LIO31_RS09465;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_012775364.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1899823 1900110 . - . ID=gene-LIO31_RS09470;Name=LIO31_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09470 NZ_CP085086.1 Protein Homology CDS 1899823 1900110 . - 0 ID=cds-WP_012028535.1;Parent=gene-LIO31_RS09470;Dbxref=Genbank:WP_012028535.1;Name=WP_012028535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028535.1;locus_tag=LIO31_RS09470;product=hypothetical protein;protein_id=WP_012028535.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1900208 1900576 . - . ID=gene-LIO31_RS09475;Name=LIO31_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09475 NZ_CP085086.1 Protein Homology CDS 1900208 1900576 . - 0 ID=cds-WP_023371689.1;Parent=gene-LIO31_RS09475;Dbxref=Genbank:WP_023371689.1;Name=WP_023371689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638726.1;locus_tag=LIO31_RS09475;product=hypothetical protein;protein_id=WP_023371689.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1900569 1901138 . - . ID=gene-LIO31_RS09480;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=LIO31_RS09480 NZ_CP085086.1 Protein Homology CDS 1900569 1901138 . - 0 ID=cds-WP_012775700.1;Parent=gene-LIO31_RS09480;Dbxref=Genbank:WP_012775700.1;Name=WP_012775700.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910916.1;locus_tag=LIO31_RS09480;product=ribonuclease M5;protein_id=WP_012775700.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1901122 1901904 . - . ID=gene-LIO31_RS09485;Name=LIO31_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09485 NZ_CP085086.1 Protein Homology CDS 1901122 1901904 . - 0 ID=cds-WP_012028536.1;Parent=gene-LIO31_RS09485;Dbxref=Genbank:WP_012028536.1;Name=WP_012028536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647471.1;locus_tag=LIO31_RS09485;product=TatD family hydrolase;protein_id=WP_012028536.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1902011 1902148 . - . ID=gene-LIO31_RS09490;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LIO31_RS09490 NZ_CP085086.1 Protein Homology CDS 1902011 1902148 . - 0 ID=cds-WP_002939016.1;Parent=gene-LIO31_RS09490;Dbxref=Genbank:WP_002939016.1;Name=WP_002939016.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939016.1;locus_tag=LIO31_RS09490;product=50S ribosomal protein L34;protein_id=WP_002939016.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1902316 1903311 . - . ID=gene-LIO31_RS09495;Name=LIO31_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09495 NZ_CP085086.1 Protein Homology CDS 1902316 1903311 . - 0 ID=cds-WP_012775367.1;Parent=gene-LIO31_RS09495;Dbxref=Genbank:WP_012775367.1;Name=WP_012775367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940330.1;locus_tag=LIO31_RS09495;product=protein jag;protein_id=WP_012775367.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1903331 1904143 . - . ID=gene-LIO31_RS09500;Name=LIO31_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09500 NZ_CP085086.1 Protein Homology CDS 1903331 1904143 . - 0 ID=cds-WP_012027897.1;Parent=gene-LIO31_RS09500;Dbxref=Genbank:WP_012027897.1;Name=WP_012027897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940331.1;locus_tag=LIO31_RS09500;product=YidC/Oxa1 family membrane protein insertase;protein_id=WP_012027897.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1904127 1904486 . - . ID=gene-LIO31_RS09505;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LIO31_RS09505 NZ_CP085086.1 Protein Homology CDS 1904127 1904486 . - 0 ID=cds-WP_004194560.1;Parent=gene-LIO31_RS09505;Dbxref=Genbank:WP_004194560.1;Name=WP_004194560.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736474.1;locus_tag=LIO31_RS09505;product=ribonuclease P protein component;protein_id=WP_004194560.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1904557 1905951 . - . ID=gene-LIO31_RS09510;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LIO31_RS09510 NZ_CP085086.1 Protein Homology CDS 1904557 1905951 . - 0 ID=cds-WP_012027899.1;Parent=gene-LIO31_RS09510;Dbxref=Genbank:WP_012027899.1;Name=WP_012027899.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194562.1;locus_tag=LIO31_RS09510;product=argininosuccinate lyase;protein_id=WP_012027899.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1905972 1907159 . - . ID=gene-LIO31_RS09515;Name=LIO31_RS09515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS09515;partial=true;pseudo=true;start_range=.,1905972 NZ_CP085086.1 Protein Homology CDS 1905972 1907159 . - 0 ID=cds-LIO31_RS09515;Parent=gene-LIO31_RS09515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002962368.1;locus_tag=LIO31_RS09515;partial=true;product=argininosuccinate synthase;pseudo=true;start_range=.,1905972;transl_table=11 NZ_CP085086.1 RefSeq gene 1907352 1907900 . - . ID=gene-LIO31_RS09520;Name=LIO31_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09520 NZ_CP085086.1 Protein Homology CDS 1907352 1907900 . - 0 ID=cds-WP_012775368.1;Parent=gene-LIO31_RS09520;Dbxref=Genbank:WP_012775368.1;Name=WP_012775368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194566.1;locus_tag=LIO31_RS09520;product=hypothetical protein;protein_id=WP_012775368.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1907970 1908497 . - . ID=gene-LIO31_RS09525;Name=LIO31_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09525 NZ_CP085086.1 Protein Homology CDS 1907970 1908497 . - 0 ID=cds-WP_014638731.1;Parent=gene-LIO31_RS09525;Dbxref=Genbank:WP_014638731.1;Name=WP_014638731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647475.1;locus_tag=LIO31_RS09525;product=transcription repressor NadR;protein_id=WP_014638731.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1908603 1909478 . - . ID=gene-LIO31_RS09530;Name=LIO31_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09530 NZ_CP085086.1 Protein Homology CDS 1908603 1909478 . - 0 ID=cds-WP_074389920.1;Parent=gene-LIO31_RS09530;Dbxref=Genbank:WP_074389920.1;Name=WP_074389920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775370.1;locus_tag=LIO31_RS09530;product=VOC family protein;protein_id=WP_074389920.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1909599 1910099 . + . ID=gene-LIO31_RS09535;Name=LIO31_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09535 NZ_CP085086.1 Protein Homology CDS 1909599 1910099 . + 0 ID=cds-WP_024408024.1;Parent=gene-LIO31_RS09535;Dbxref=Genbank:WP_024408024.1;Name=WP_024408024.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940345.1;locus_tag=LIO31_RS09535;product=NUDIX domain-containing protein;protein_id=WP_024408024.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1910149 1911096 . - . ID=gene-LIO31_RS09540;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=LIO31_RS09540 NZ_CP085086.1 Protein Homology CDS 1910149 1911096 . - 0 ID=cds-WP_012775454.1;Parent=gene-LIO31_RS09540;Dbxref=Genbank:WP_012775454.1;Name=WP_012775454.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647478.1;locus_tag=LIO31_RS09540;product=homocysteine S-methyltransferase;protein_id=WP_012775454.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1911109 1912485 . - . ID=gene-LIO31_RS09545;Name=LIO31_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09545 NZ_CP085086.1 Protein Homology CDS 1911109 1912485 . - 0 ID=cds-WP_074389090.1;Parent=gene-LIO31_RS09545;Dbxref=Genbank:WP_074389090.1;Name=WP_074389090.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638734.1;locus_tag=LIO31_RS09545;product=amino acid permease;protein_id=WP_074389090.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1912621 1914075 . - . ID=gene-LIO31_RS09550;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LIO31_RS09550 NZ_CP085086.1 Protein Homology CDS 1912621 1914075 . - 0 ID=cds-WP_074389921.1;Parent=gene-LIO31_RS09550;Dbxref=Genbank:WP_074389921.1;Name=WP_074389921.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917323.1;locus_tag=LIO31_RS09550;product=glutamate--tRNA ligase;protein_id=WP_074389921.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1914147 1915427 . - . ID=gene-LIO31_RS09555;Name=LIO31_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09555 NZ_CP085086.1 Protein Homology CDS 1914147 1915427 . - 0 ID=cds-WP_024405402.1;Parent=gene-LIO31_RS09555;Dbxref=Genbank:WP_024405402.1;Name=WP_024405402.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647481.1;locus_tag=LIO31_RS09555;product=MFS transporter;protein_id=WP_024405402.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1915514 1916173 . - . ID=gene-LIO31_RS09560;Name=LIO31_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09560 NZ_CP085086.1 Protein Homology CDS 1915514 1916173 . - 0 ID=cds-WP_024405403.1;Parent=gene-LIO31_RS09560;Dbxref=Genbank:WP_024405403.1;Name=WP_024405403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194580.1;locus_tag=LIO31_RS09560;product=hypothetical protein;protein_id=WP_024405403.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1916178 1916624 . - . ID=gene-LIO31_RS09565;Name=LIO31_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09565 NZ_CP085086.1 Protein Homology CDS 1916178 1916624 . - 0 ID=cds-WP_024405404.1;Parent=gene-LIO31_RS09565;Dbxref=Genbank:WP_024405404.1;Name=WP_024405404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775372.1;locus_tag=LIO31_RS09565;product=LytTR family transcriptional regulator;protein_id=WP_024405404.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1916801 1917559 . - . ID=gene-LIO31_RS09570;Name=LIO31_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09570 NZ_CP085086.1 Protein Homology CDS 1916801 1917559 . - 0 ID=cds-WP_002939965.1;Parent=gene-LIO31_RS09570;Dbxref=Genbank:WP_002939965.1;Name=WP_002939965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028545.1;locus_tag=LIO31_RS09570;product=TIGR00266 family protein;protein_id=WP_002939965.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1917767 1918261 . - . ID=gene-LIO31_RS09575;Name=LIO31_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09575 NZ_CP085086.1 Protein Homology CDS 1917767 1918261 . - 0 ID=cds-WP_024403073.1;Parent=gene-LIO31_RS09575;Dbxref=Genbank:WP_024403073.1;Name=WP_024403073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939964.1;locus_tag=LIO31_RS09575;product=carbonic anhydrase;protein_id=WP_024403073.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1918385 1919752 . - . ID=gene-LIO31_RS09580;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LIO31_RS09580 NZ_CP085086.1 Protein Homology CDS 1918385 1919752 . - 0 ID=cds-WP_024405405.1;Parent=gene-LIO31_RS09580;Dbxref=Genbank:WP_024405405.1;Name=WP_024405405.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636721.1;locus_tag=LIO31_RS09580;product=DNA repair protein RadA;protein_id=WP_024405405.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1919773 1920291 . - . ID=gene-LIO31_RS09585;Name=LIO31_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09585 NZ_CP085086.1 Protein Homology CDS 1919773 1920291 . - 0 ID=cds-WP_226960416.1;Parent=gene-LIO31_RS09585;Dbxref=Genbank:WP_226960416.1;Name=WP_226960416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=LIO31_RS09585;product=histidine phosphatase family protein;protein_id=WP_226960416.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1920298 1920741 . - . ID=gene-LIO31_RS09590;Name=LIO31_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09590 NZ_CP085086.1 Protein Homology CDS 1920298 1920741 . - 0 ID=cds-WP_002939955.1;Parent=gene-LIO31_RS09590;Dbxref=Genbank:WP_002939955.1;Name=WP_002939955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701975.1;locus_tag=LIO31_RS09590;product=dUTP diphosphatase;protein_id=WP_002939955.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1920843 1922627 . - . ID=gene-LIO31_RS09595;Name=LIO31_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09595 NZ_CP085086.1 Protein Homology CDS 1920843 1922627 . - 0 ID=cds-WP_074389091.1;Parent=gene-LIO31_RS09595;Dbxref=Genbank:WP_074389091.1;Name=WP_074389091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859866.1;locus_tag=LIO31_RS09595;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389091.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1922628 1924334 . - . ID=gene-LIO31_RS09600;Name=LIO31_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09600 NZ_CP085086.1 Protein Homology CDS 1922628 1924334 . - 0 ID=cds-WP_074389922.1;Parent=gene-LIO31_RS09600;Dbxref=Genbank:WP_074389922.1;Name=WP_074389922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298350.1;locus_tag=LIO31_RS09600;product=ABC transporter ATP-binding protein/permease;protein_id=WP_074389922.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1924327 1924776 . - . ID=gene-LIO31_RS09605;Name=LIO31_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09605 NZ_CP085086.1 Protein Homology CDS 1924327 1924776 . - 0 ID=cds-WP_012027921.1;Parent=gene-LIO31_RS09605;Dbxref=Genbank:WP_012027921.1;Name=WP_012027921.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027921.1;locus_tag=LIO31_RS09605;product=MarR family transcriptional regulator;protein_id=WP_012027921.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1924998 1926014 . + . ID=gene-LIO31_RS09610;Name=LIO31_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09610 NZ_CP085086.1 Protein Homology CDS 1924998 1926014 . + 0 ID=cds-WP_012027922.1;Parent=gene-LIO31_RS09610;Dbxref=Genbank:WP_012027922.1;Name=WP_012027922.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027922.1;locus_tag=LIO31_RS09610;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_012027922.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1926059 1926958 . + . ID=gene-LIO31_RS09615;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LIO31_RS09615 NZ_CP085086.1 Protein Homology CDS 1926059 1926958 . + 0 ID=cds-WP_004298345.1;Parent=gene-LIO31_RS09615;Dbxref=Genbank:WP_004298345.1;Name=WP_004298345.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298345.1;locus_tag=LIO31_RS09615;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_004298345.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1926976 1927653 . - . ID=gene-LIO31_RS09620;Name=LIO31_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09620 NZ_CP085086.1 Protein Homology CDS 1926976 1927653 . - 0 ID=cds-WP_012027923.1;Parent=gene-LIO31_RS09620;Dbxref=Genbank:WP_012027923.1;Name=WP_012027923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027923.1;locus_tag=LIO31_RS09620;product=rhomboid family intramembrane serine protease;protein_id=WP_012027923.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1927637 1928179 . - . ID=gene-LIO31_RS09625;Name=LIO31_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09625 NZ_CP085086.1 Protein Homology CDS 1927637 1928179 . - 0 ID=cds-WP_012027924.1;Parent=gene-LIO31_RS09625;Dbxref=Genbank:WP_012027924.1;Name=WP_012027924.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027924.1;locus_tag=LIO31_RS09625;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_012027924.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1928220 1929347 . - . ID=gene-LIO31_RS09630;Name=LIO31_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09630 NZ_CP085086.1 Protein Homology CDS 1928220 1929347 . - 0 ID=cds-WP_024403069.1;Parent=gene-LIO31_RS09630;Dbxref=Genbank:WP_024403069.1;Name=WP_024403069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939918.1;locus_tag=LIO31_RS09630;product=N-acetyldiaminopimelate deacetylase;protein_id=WP_024403069.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1929357 1930055 . - . ID=gene-LIO31_RS09635;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LIO31_RS09635 NZ_CP085086.1 Protein Homology CDS 1929357 1930055 . - 0 ID=cds-WP_024403068.1;Parent=gene-LIO31_RS09635;Dbxref=Genbank:WP_024403068.1;Name=WP_024403068.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017768831.1;locus_tag=LIO31_RS09635;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_024403068.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1930323 1931615 . + . ID=gene-LIO31_RS09640;Name=LIO31_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09640 NZ_CP085086.1 Protein Homology CDS 1930323 1931615 . + 0 ID=cds-WP_171840749.1-6;Parent=gene-LIO31_RS09640;Dbxref=Genbank:WP_171840749.1;Name=WP_171840749.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558053.1;locus_tag=LIO31_RS09640;product=IS110 family transposase;protein_id=WP_171840749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1931953 1932942 . - . ID=gene-LIO31_RS09645;Name=LIO31_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09645 NZ_CP085086.1 GeneMarkS-2+ CDS 1931953 1932942 . - 0 ID=cds-WP_225620797.1;Parent=gene-LIO31_RS09645;Dbxref=Genbank:WP_225620797.1;Name=WP_225620797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LIO31_RS09645;product=hypothetical protein;protein_id=WP_225620797.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1933050 1933790 . - . ID=gene-LIO31_RS09650;Name=LIO31_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09650 NZ_CP085086.1 Protein Homology CDS 1933050 1933790 . - 0 ID=cds-WP_012775375.1;Parent=gene-LIO31_RS09650;Dbxref=Genbank:WP_012775375.1;Name=WP_012775375.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939909.1;locus_tag=LIO31_RS09650;product=metallophosphoesterase;protein_id=WP_012775375.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1933856 1935205 . - . ID=gene-LIO31_RS09655;Name=LIO31_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09655 NZ_CP085086.1 Protein Homology CDS 1933856 1935205 . - 0 ID=cds-WP_226960908.1;Parent=gene-LIO31_RS09655;Dbxref=Genbank:WP_226960908.1;Name=WP_226960908.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017648691.1;locus_tag=LIO31_RS09655;product=glucose-6-phosphate isomerase;protein_id=WP_226960908.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1935287 1935829 . - . ID=gene-LIO31_RS09660;Name=LIO31_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09660 NZ_CP085086.1 Protein Homology CDS 1935287 1935829 . - 0 ID=cds-WP_012775377.1;Parent=gene-LIO31_RS09660;Dbxref=Genbank:WP_012775377.1;Name=WP_012775377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647504.1;locus_tag=LIO31_RS09660;product=hypothetical protein;protein_id=WP_012775377.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1935968 1936057 . - . ID=gene-LIO31_RS09665;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LIO31_RS09665 NZ_CP085086.1 cmsearch SRP_RNA 1935968 1936057 . - . ID=rna-LIO31_RS09665;Parent=gene-LIO31_RS09665;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS09665;product=signal recognition particle sRNA small type NZ_CP085086.1 cmsearch exon 1935968 1936057 . - . ID=exon-LIO31_RS09665-1;Parent=rna-LIO31_RS09665;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS09665;product=signal recognition particle sRNA small type NZ_CP085086.1 RefSeq gene 1936100 1936621 . - . ID=gene-LIO31_RS09670;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LIO31_RS09670 NZ_CP085086.1 Protein Homology CDS 1936100 1936621 . - 0 ID=cds-WP_012027934.1;Parent=gene-LIO31_RS09670;Dbxref=Genbank:WP_012027934.1;Name=WP_012027934.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730639.1;locus_tag=LIO31_RS09670;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_012027934.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1936902 1938872 . - . ID=gene-LIO31_RS09675;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LIO31_RS09675 NZ_CP085086.1 Protein Homology CDS 1936902 1938872 . - 0 ID=cds-WP_023371737.1;Parent=gene-LIO31_RS09675;Dbxref=Genbank:WP_023371737.1;Name=WP_023371737.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647506.1;locus_tag=LIO31_RS09675;product=transketolase;protein_id=WP_023371737.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1939084 1940175 . - . ID=gene-LIO31_RS09680;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=LIO31_RS09680 NZ_CP085086.1 Protein Homology CDS 1939084 1940175 . - 0 ID=cds-WP_023371739.1;Parent=gene-LIO31_RS09680;Dbxref=Genbank:WP_023371739.1;Name=WP_023371739.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863918.1;locus_tag=LIO31_RS09680;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_023371739.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1940285 1941973 . - . ID=gene-LIO31_RS09685;Name=LIO31_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09685 NZ_CP085086.1 Protein Homology CDS 1940285 1941973 . - 0 ID=cds-WP_024383971.1;Parent=gene-LIO31_RS09685;Dbxref=Genbank:WP_024383971.1;Name=WP_024383971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736511.1;locus_tag=LIO31_RS09685;product=transcription antiterminator;protein_id=WP_024383971.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1942098 1942715 . - . ID=gene-LIO31_RS09690;Name=LIO31_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09690 NZ_CP085086.1 Protein Homology CDS 1942098 1942715 . - 0 ID=cds-WP_012775380.1;Parent=gene-LIO31_RS09690;Dbxref=Genbank:WP_012775380.1;Name=WP_012775380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772020.1;locus_tag=LIO31_RS09690;product=hypothetical protein;protein_id=WP_012775380.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1942800 1943516 . - . ID=gene-LIO31_RS09695;Name=LIO31_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09695 NZ_CP085086.1 Protein Homology CDS 1942800 1943516 . - 0 ID=cds-WP_023371743.1;Parent=gene-LIO31_RS09695;Dbxref=Genbank:WP_023371743.1;Name=WP_023371743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001934215.1;locus_tag=LIO31_RS09695;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023371743.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1943516 1944379 . - . ID=gene-LIO31_RS09700;Name=LIO31_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09700 NZ_CP085086.1 Protein Homology CDS 1943516 1944379 . - 0 ID=cds-WP_023371745.1;Parent=gene-LIO31_RS09700;Dbxref=Genbank:WP_023371745.1;Name=WP_023371745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939880.1;locus_tag=LIO31_RS09700;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_023371745.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1944385 1945047 . - . ID=gene-LIO31_RS09705;Name=LIO31_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09705 NZ_CP085086.1 Protein Homology CDS 1944385 1945047 . - 0 ID=cds-WP_023371747.1;Parent=gene-LIO31_RS09705;Dbxref=Genbank:WP_023371747.1;Name=WP_023371747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014622185.1;locus_tag=LIO31_RS09705;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_023371747.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1945058 1945543 . - . ID=gene-LIO31_RS09710;Name=LIO31_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09710 NZ_CP085086.1 Protein Homology CDS 1945058 1945543 . - 0 ID=cds-WP_012027941.1;Parent=gene-LIO31_RS09710;Dbxref=Genbank:WP_012027941.1;Name=WP_012027941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194423.1;locus_tag=LIO31_RS09710;product=PTS sugar transporter subunit IIA;protein_id=WP_012027941.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1945606 1945884 . - . ID=gene-LIO31_RS09715;Name=LIO31_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09715 NZ_CP085086.1 Protein Homology CDS 1945606 1945884 . - 0 ID=cds-WP_009910950.1;Parent=gene-LIO31_RS09715;Dbxref=Genbank:WP_009910950.1;Name=WP_009910950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241478.1;locus_tag=LIO31_RS09715;product=PTS sugar transporter subunit IIB;protein_id=WP_009910950.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1945943 1947391 . - . ID=gene-LIO31_RS09720;Name=LIO31_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09720 NZ_CP085086.1 Protein Homology CDS 1945943 1947391 . - 0 ID=cds-WP_023371749.1;Parent=gene-LIO31_RS09720;Dbxref=Genbank:WP_023371749.1;Name=WP_023371749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736518.1;locus_tag=LIO31_RS09720;product=PTS sugar transporter subunit IIC;protein_id=WP_023371749.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1947739 1954020 . - . ID=gene-LIO31_RS09725;Name=LIO31_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09725 NZ_CP085086.1 Protein Homology CDS 1947739 1954020 . - 0 ID=cds-WP_023371752.1;Parent=gene-LIO31_RS09725;Dbxref=Genbank:WP_023371752.1;Name=WP_023371752.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730641.1;locus_tag=LIO31_RS09725;product=pullulanase;protein_id=WP_023371752.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1954202 1955143 . - . ID=gene-LIO31_RS09730;Name=LIO31_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09730 NZ_CP085086.1 Protein Homology CDS 1954202 1955143 . - 0 ID=cds-WP_074389923.1;Parent=gene-LIO31_RS09730;Dbxref=Genbank:WP_074389923.1;Name=WP_074389923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939863.1;locus_tag=LIO31_RS09730;product=LacI family transcriptional regulator;protein_id=WP_074389923.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1955508 1956254 . - . ID=gene-LIO31_RS09735;Name=LIO31_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09735 NZ_CP085086.1 Protein Homology CDS 1955508 1956254 . - 0 ID=cds-WP_023371756.1;Parent=gene-LIO31_RS09735;Dbxref=Genbank:WP_023371756.1;Name=WP_023371756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647515.1;locus_tag=LIO31_RS09735;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_023371756.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1956264 1956923 . - . ID=gene-LIO31_RS09740;Name=LIO31_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09740 NZ_CP085086.1 Protein Homology CDS 1956264 1956923 . - 0 ID=cds-WP_002938543.1;Parent=gene-LIO31_RS09740;Dbxref=Genbank:WP_002938543.1;Name=WP_002938543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027947.1;locus_tag=LIO31_RS09740;product=amino acid ABC transporter permease;protein_id=WP_002938543.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1956936 1957724 . - . ID=gene-LIO31_RS09745;Name=LIO31_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09745 NZ_CP085086.1 Protein Homology CDS 1956936 1957724 . - 0 ID=cds-WP_023371758.1;Parent=gene-LIO31_RS09745;Dbxref=Genbank:WP_023371758.1;Name=WP_023371758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647516.1;locus_tag=LIO31_RS09745;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_023371758.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1957887 1958498 . - . ID=gene-LIO31_RS09750;Name=LIO31_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09750 NZ_CP085086.1 Protein Homology CDS 1957887 1958498 . - 0 ID=cds-WP_024383969.1;Parent=gene-LIO31_RS09750;Dbxref=Genbank:WP_024383969.1;Name=WP_024383969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027949.1;locus_tag=LIO31_RS09750;product=CHAP domain-containing protein;protein_id=WP_024383969.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1958824 1960200 . - . ID=gene-LIO31_RS09755;Name=LIO31_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09755 NZ_CP085086.1 Protein Homology CDS 1958824 1960200 . - 0 ID=cds-WP_023371763.1;Parent=gene-LIO31_RS09755;Dbxref=Genbank:WP_023371763.1;Name=WP_023371763.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938559.1;locus_tag=LIO31_RS09755;product=PTS transporter subunit EIIC;protein_id=WP_023371763.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1960244 1960684 . - . ID=gene-LIO31_RS09760;Name=LIO31_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09760 NZ_CP085086.1 Protein Homology CDS 1960244 1960684 . - 0 ID=cds-WP_023371765.1;Parent=gene-LIO31_RS09760;Dbxref=Genbank:WP_023371765.1;Name=WP_023371765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938562.1;locus_tag=LIO31_RS09760;product=DUF3284 domain-containing protein;protein_id=WP_023371765.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1960703 1961017 . - . ID=gene-LIO31_RS09765;Name=LIO31_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09765 NZ_CP085086.1 Protein Homology CDS 1960703 1961017 . - 0 ID=cds-WP_023371767.1;Parent=gene-LIO31_RS09765;Dbxref=Genbank:WP_023371767.1;Name=WP_023371767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938564.1;locus_tag=LIO31_RS09765;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_023371767.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1961019 1961330 . - . ID=gene-LIO31_RS09770;Name=LIO31_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09770 NZ_CP085086.1 Protein Homology CDS 1961019 1961330 . - 0 ID=cds-WP_014638782.1;Parent=gene-LIO31_RS09770;Dbxref=Genbank:WP_014638782.1;Name=WP_014638782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938566.1;locus_tag=LIO31_RS09770;product=PTS sugar transporter subunit IIB;protein_id=WP_014638782.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1961343 1963337 . - . ID=gene-LIO31_RS09775;Name=LIO31_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09775 NZ_CP085086.1 Protein Homology CDS 1961343 1963337 . - 0 ID=cds-WP_024383968.1;Parent=gene-LIO31_RS09775;Dbxref=Genbank:WP_024383968.1;Name=WP_024383968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938567.1;locus_tag=LIO31_RS09775;product=BglG family transcription antiterminator;protein_id=WP_024383968.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1963429 1964535 . - . ID=gene-LIO31_RS09780;Name=LIO31_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09780 NZ_CP085086.1 Protein Homology CDS 1963429 1964535 . - 0 ID=cds-WP_023371771.1;Parent=gene-LIO31_RS09780;Dbxref=Genbank:WP_023371771.1;Name=WP_023371771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636529.1;locus_tag=LIO31_RS09780;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_023371771.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1964545 1965945 . - . ID=gene-LIO31_RS09785;Name=LIO31_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09785 NZ_CP085086.1 Protein Homology CDS 1964545 1965945 . - 0 ID=cds-WP_023371772.1;Parent=gene-LIO31_RS09785;Dbxref=Genbank:WP_023371772.1;Name=WP_023371772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647522.1;locus_tag=LIO31_RS09785;product=glycoside hydrolase family 1 protein;protein_id=WP_023371772.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1965942 1967303 . - . ID=gene-LIO31_RS09790;Name=LIO31_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09790 NZ_CP085086.1 Protein Homology CDS 1965942 1967303 . - 0 ID=cds-WP_074389925.1;Parent=gene-LIO31_RS09790;Dbxref=Genbank:WP_074389925.1;Name=WP_074389925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938572.1;locus_tag=LIO31_RS09790;product=6-phospho-beta-glucosidase;protein_id=WP_074389925.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1967478 1969979 . - . ID=gene-LIO31_RS09795;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LIO31_RS09795 NZ_CP085086.1 Protein Homology CDS 1967478 1969979 . - 0 ID=cds-WP_074389926.1;Parent=gene-LIO31_RS09795;Dbxref=Genbank:WP_074389926.1;Name=WP_074389926.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639013.1;locus_tag=LIO31_RS09795;product=leucine--tRNA ligase;protein_id=WP_074389926.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1970082 1971974 . - . ID=gene-LIO31_RS09800;Name=LIO31_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09800 NZ_CP085086.1 Protein Homology CDS 1970082 1971974 . - 0 ID=cds-WP_074389927.1;Parent=gene-LIO31_RS09800;Dbxref=Genbank:WP_074389927.1;Name=WP_074389927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010922744.1;locus_tag=LIO31_RS09800;product=endopeptidase;protein_id=WP_074389927.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1972030 1972869 . - . ID=gene-LIO31_RS09805;Name=LIO31_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09805 NZ_CP085086.1 Protein Homology CDS 1972030 1972869 . - 0 ID=cds-WP_012775384.1;Parent=gene-LIO31_RS09805;Dbxref=Genbank:WP_012775384.1;Name=WP_012775384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638790.1;locus_tag=LIO31_RS09805;product=metal ABC transporter permease;protein_id=WP_012775384.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1972862 1973722 . - . ID=gene-LIO31_RS09810;Name=LIO31_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09810 NZ_CP085086.1 Protein Homology CDS 1972862 1973722 . - 0 ID=cds-WP_012775385.1;Parent=gene-LIO31_RS09810;Dbxref=Genbank:WP_012775385.1;Name=WP_012775385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942046.1;locus_tag=LIO31_RS09810;product=metal ABC transporter permease;protein_id=WP_012775385.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1973715 1974485 . - . ID=gene-LIO31_RS09815;Name=LIO31_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09815 NZ_CP085086.1 Protein Homology CDS 1973715 1974485 . - 0 ID=cds-WP_009910969.1;Parent=gene-LIO31_RS09815;Dbxref=Genbank:WP_009910969.1;Name=WP_009910969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942041.1;locus_tag=LIO31_RS09815;product=metal ABC transporter ATP-binding protein;protein_id=WP_009910969.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1975039 1975962 . - . ID=gene-LIO31_RS09820;Name=LIO31_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09820 NZ_CP085086.1 Protein Homology CDS 1975039 1975962 . - 0 ID=cds-WP_012775387.1;Parent=gene-LIO31_RS09820;Dbxref=Genbank:WP_012775387.1;Name=WP_012775387.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730650.1;locus_tag=LIO31_RS09820;product=zinc ABC transporter substrate-binding protein;protein_id=WP_012775387.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1976088 1976747 . + . ID=gene-LIO31_RS09825;Name=LIO31_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09825 NZ_CP085086.1 Protein Homology CDS 1976088 1976747 . + 0 ID=cds-WP_012027964.1;Parent=gene-LIO31_RS09825;Dbxref=Genbank:WP_012027964.1;Name=WP_012027964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638793.1;locus_tag=LIO31_RS09825;product=metal-dependent transcriptional regulator;protein_id=WP_012027964.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1976783 1977058 . - . ID=gene-LIO31_RS09830;Name=LIO31_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09830 NZ_CP085086.1 Protein Homology CDS 1976783 1977058 . - 0 ID=cds-WP_014636530.1;Parent=gene-LIO31_RS09830;Dbxref=Genbank:WP_014636530.1;Name=WP_014636530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636530.1;locus_tag=LIO31_RS09830;product=hypothetical protein;protein_id=WP_014636530.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1977156 1977830 . - . ID=gene-LIO31_RS09835;Name=LIO31_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09835 NZ_CP085086.1 Protein Homology CDS 1977156 1977830 . - 0 ID=cds-WP_012775389.1;Parent=gene-LIO31_RS09835;Dbxref=Genbank:WP_012775389.1;Name=WP_012775389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775389.1;locus_tag=LIO31_RS09835;product=CPBP family intramembrane metalloprotease;protein_id=WP_012775389.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1978083 1978714 . - . ID=gene-LIO31_RS09840;Name=LIO31_RS09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LIO31_RS09840;partial=true;pseudo=true;start_range=.,1978083 NZ_CP085086.1 Protein Homology CDS 1978083 1978714 . - 0 ID=cds-LIO31_RS09840;Parent=gene-LIO31_RS09840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941995.1;locus_tag=LIO31_RS09840;partial=true;product=response regulator transcription factor;pseudo=true;start_range=.,1978083;transl_table=11 NZ_CP085086.1 RefSeq gene 1978930 1979031 . - . ID=gene-LIO31_RS09845;Name=LIO31_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09845 NZ_CP085086.1 Protein Homology CDS 1978930 1979031 . - 0 ID=cds-WP_153052760.1;Parent=gene-LIO31_RS09845;Dbxref=Genbank:WP_153052760.1;Name=WP_153052760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.2;locus_tag=LIO31_RS09845;product=putative holin-like toxin;protein_id=WP_153052760.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1979186 1979371 . - . ID=gene-LIO31_RS09850;Name=LIO31_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09850 NZ_CP085086.1 Protein Homology CDS 1979186 1979371 . - 0 ID=cds-WP_014636173.1;Parent=gene-LIO31_RS09850;Dbxref=Genbank:WP_014636173.1;Name=WP_014636173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636173.1;locus_tag=LIO31_RS09850;product=hypothetical protein;protein_id=WP_014636173.1;transl_table=11 NZ_CP085086.1 RefSeq pseudogene 1979447 1979889 . - . ID=gene-LIO31_RS09855;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=pseudogene;locus_tag=LIO31_RS09855;pseudo=true NZ_CP085086.1 Protein Homology CDS 1979447 1979889 . - 0 ID=cds-LIO31_RS09855;Parent=gene-LIO31_RS09855;Note=frameshifted;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183874.1;locus_tag=LIO31_RS09855;product=D-aminoacyl-tRNA deacylase;pseudo=true;transl_table=11 NZ_CP085086.1 RefSeq gene 1979891 1982092 . - . ID=gene-LIO31_RS09860;Name=LIO31_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09860 NZ_CP085086.1 Protein Homology CDS 1979891 1982092 . - 0 ID=cds-WP_024383967.1;Parent=gene-LIO31_RS09860;Dbxref=Genbank:WP_024383967.1;Name=WP_024383967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028572.1;locus_tag=LIO31_RS09860;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_024383967.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1982348 1984789 . + . ID=gene-LIO31_RS09865;Name=sntA;gbkey=Gene;gene=sntA;gene_biotype=protein_coding;locus_tag=LIO31_RS09865 NZ_CP085086.1 Protein Homology CDS 1982348 1984789 . + 0 ID=cds-WP_074389545.1;Parent=gene-LIO31_RS09865;Dbxref=Genbank:WP_074389545.1;Name=WP_074389545.1;gbkey=CDS;gene=sntA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027972.1;locus_tag=LIO31_RS09865;product=heme-binding protein SntA;protein_id=WP_074389545.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1985311 1986135 . - . ID=gene-LIO31_RS09870;Name=LIO31_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09870 NZ_CP085086.1 Protein Homology CDS 1985311 1986135 . - 0 ID=cds-WP_170240052.1;Parent=gene-LIO31_RS09870;Dbxref=Genbank:WP_170240052.1;Name=WP_170240052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027973.1;locus_tag=LIO31_RS09870;product=class C sortase;protein_id=WP_170240052.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1986132 1986986 . - . ID=gene-LIO31_RS09875;Name=LIO31_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09875 NZ_CP085086.1 Protein Homology CDS 1986132 1986986 . - 0 ID=cds-WP_226960909.1;Parent=gene-LIO31_RS09875;Dbxref=Genbank:WP_226960909.1;Name=WP_226960909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027974.1;locus_tag=LIO31_RS09875;product=class C sortase;protein_id=WP_226960909.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1986964 1987851 . - . ID=gene-LIO31_RS09880;Name=LIO31_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09880 NZ_CP085086.1 Protein Homology CDS 1986964 1987851 . - 0 ID=cds-WP_012027975.1;Parent=gene-LIO31_RS09880;Dbxref=Genbank:WP_012027975.1;Name=WP_012027975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027975.1;locus_tag=LIO31_RS09880;product=class C sortase;protein_id=WP_012027975.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1988124 1988978 . - . ID=gene-LIO31_RS09885;Name=LIO31_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09885 NZ_CP085086.1 Protein Homology CDS 1988124 1988978 . - 0 ID=cds-WP_226960910.1;Parent=gene-LIO31_RS09885;Dbxref=Genbank:WP_226960910.1;Name=WP_226960910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027976.1;locus_tag=LIO31_RS09885;product=SpaA isopeptide-forming pilin-related protein;protein_id=WP_226960910.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1989002 1990111 . - . ID=gene-LIO31_RS09890;Name=LIO31_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09890 NZ_CP085086.1 Protein Homology CDS 1989002 1990111 . - 0 ID=cds-WP_074390163.1;Parent=gene-LIO31_RS09890;Dbxref=Genbank:WP_074390163.1;Name=WP_074390163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.2;locus_tag=LIO31_RS09890;product=SpaA isopeptide-forming pilin-related protein;protein_id=WP_074390163.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1990127 1990954 . - . ID=gene-LIO31_RS09895;Name=LIO31_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09895 NZ_CP085086.1 Protein Homology CDS 1990127 1990954 . - 0 ID=cds-WP_074403920.1;Parent=gene-LIO31_RS09895;Dbxref=Genbank:WP_074403920.1;Name=WP_074403920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027869.2;locus_tag=LIO31_RS09895;product=pilin N-terminal domain-containing protein;protein_id=WP_074403920.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1990998 1998251 . - . ID=gene-LIO31_RS09900;Name=LIO31_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09900 NZ_CP085086.1 Protein Homology CDS 1990998 1998251 . - 0 ID=cds-WP_226960417.1;Parent=gene-LIO31_RS09900;Dbxref=Genbank:WP_226960417.1;Name=WP_226960417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012956.2;locus_tag=LIO31_RS09900;product=SpaA isopeptide-forming pilin-related protein;protein_id=WP_226960417.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1999640 1999762 . - . ID=gene-LIO31_RS10320;Name=LIO31_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10320 NZ_CP085086.1 Protein Homology CDS 1999640 1999762 . - 0 ID=cds-WP_012027982.1;Parent=gene-LIO31_RS10320;Dbxref=Genbank:WP_012027982.1;Name=WP_012027982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027982.1;locus_tag=LIO31_RS10320;product=membrane protein;protein_id=WP_012027982.1;transl_table=11 NZ_CP085086.1 RefSeq gene 1999766 2000512 . - . ID=gene-LIO31_RS09905;Name=LIO31_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09905 NZ_CP085086.1 Protein Homology CDS 1999766 2000512 . - 0 ID=cds-WP_012775393.1;Parent=gene-LIO31_RS09905;Dbxref=Genbank:WP_012775393.1;Name=WP_012775393.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941981.1;locus_tag=LIO31_RS09905;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_012775393.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2000514 2001467 . - . ID=gene-LIO31_RS09910;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LIO31_RS09910 NZ_CP085086.1 Protein Homology CDS 2000514 2001467 . - 0 ID=cds-WP_012775394.1;Parent=gene-LIO31_RS09910;Dbxref=Genbank:WP_012775394.1;Name=WP_012775394.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001099287.1;locus_tag=LIO31_RS09910;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_012775394.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2002063 2002416 . - . ID=gene-LIO31_RS09915;Name=LIO31_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09915 NZ_CP085086.1 Protein Homology CDS 2002063 2002416 . - 0 ID=cds-WP_012027987.1;Parent=gene-LIO31_RS09915;Dbxref=Genbank:WP_012027987.1;Name=WP_012027987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910982.1;locus_tag=LIO31_RS09915;product=RNA-binding protein;protein_id=WP_012027987.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2002418 2002888 . - . ID=gene-LIO31_RS09920;Name=LIO31_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09920 NZ_CP085086.1 Protein Homology CDS 2002418 2002888 . - 0 ID=cds-WP_012027988.1;Parent=gene-LIO31_RS09920;Dbxref=Genbank:WP_012027988.1;Name=WP_012027988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591596.1;locus_tag=LIO31_RS09920;product=DUF3013 family protein;protein_id=WP_012027988.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2002890 2003225 . - . ID=gene-LIO31_RS09925;Name=LIO31_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09925 NZ_CP085086.1 Protein Homology CDS 2002890 2003225 . - 0 ID=cds-WP_012027989.1;Parent=gene-LIO31_RS09925;Dbxref=Genbank:WP_012027989.1;Name=WP_012027989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647540.1;locus_tag=LIO31_RS09925;product=nucleotide pyrophosphohydrolase;protein_id=WP_012027989.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2003295 2004581 . + . ID=gene-LIO31_RS09930;Name=LIO31_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09930 NZ_CP085086.1 Protein Homology CDS 2003295 2004581 . + 0 ID=cds-WP_012775707.1;Parent=gene-LIO31_RS09930;Dbxref=Genbank:WP_012775707.1;Name=WP_012775707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636735.1;locus_tag=LIO31_RS09930;product=replication-associated recombination protein A;protein_id=WP_012775707.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2004683 2004876 . + . ID=gene-LIO31_RS09935;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LIO31_RS09935 NZ_CP085086.1 cmsearch ncRNA 2004683 2004876 . + . ID=rna-LIO31_RS09935;Parent=gene-LIO31_RS09935;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS09935;product=6S RNA NZ_CP085086.1 cmsearch exon 2004683 2004876 . + . ID=exon-LIO31_RS09935-1;Parent=rna-LIO31_RS09935;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LIO31_RS09935;product=6S RNA NZ_CP085086.1 RefSeq gene 2004885 2004957 . + . ID=gene-LIO31_RS09940;Name=LIO31_RS09940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS09940 NZ_CP085086.1 tRNAscan-SE tRNA 2004885 2004957 . + . ID=rna-LIO31_RS09940;Parent=gene-LIO31_RS09940;anticodon=(pos:2004918..2004920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09940;product=tRNA-Lys NZ_CP085086.1 tRNAscan-SE exon 2004885 2004957 . + . ID=exon-LIO31_RS09940-1;Parent=rna-LIO31_RS09940;anticodon=(pos:2004918..2004920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS09940;product=tRNA-Lys NZ_CP085086.1 RefSeq gene 2005063 2005620 . - . ID=gene-LIO31_RS09945;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=LIO31_RS09945 NZ_CP085086.1 Protein Homology CDS 2005063 2005620 . - 0 ID=cds-WP_012027991.1;Parent=gene-LIO31_RS09945;Dbxref=Genbank:WP_012027991.1;Name=WP_012027991.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;gene=nrdG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639014.1;locus_tag=LIO31_RS09945;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_012027991.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2005807 2006301 . - . ID=gene-LIO31_RS09950;Name=LIO31_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09950 NZ_CP085086.1 Protein Homology CDS 2005807 2006301 . - 0 ID=cds-WP_012775395.1;Parent=gene-LIO31_RS09950;Dbxref=Genbank:WP_012775395.1;Name=WP_012775395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939125.1;locus_tag=LIO31_RS09950;product=GNAT family N-acetyltransferase;protein_id=WP_012775395.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2006303 2007649 . - . ID=gene-LIO31_RS09955;Name=LIO31_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09955 NZ_CP085086.1 Protein Homology CDS 2006303 2007649 . - 0 ID=cds-WP_012027993.1;Parent=gene-LIO31_RS09955;Dbxref=Genbank:WP_012027993.1;Name=WP_012027993.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027993.1;locus_tag=LIO31_RS09955;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_012027993.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2007651 2007785 . - . ID=gene-LIO31_RS10325;Name=LIO31_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10325 NZ_CP085086.1 Protein Homology CDS 2007651 2007785 . - 0 ID=cds-WP_002939130.1;Parent=gene-LIO31_RS10325;Dbxref=Genbank:WP_002939130.1;Name=WP_002939130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647544.1;locus_tag=LIO31_RS10325;product=hypothetical protein;protein_id=WP_002939130.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2007884 2010055 . - . ID=gene-LIO31_RS09960;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=LIO31_RS09960 NZ_CP085086.1 Protein Homology CDS 2007884 2010055 . - 0 ID=cds-WP_012775396.1;Parent=gene-LIO31_RS09960;Dbxref=Genbank:WP_012775396.1;Name=WP_012775396.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647545.1;locus_tag=LIO31_RS09960;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_012775396.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2010438 2011727 . + . ID=gene-LIO31_RS09965;Name=LIO31_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09965 NZ_CP085086.1 Protein Homology CDS 2010438 2011727 . + 0 ID=cds-WP_012775456.1;Parent=gene-LIO31_RS09965;Dbxref=Genbank:WP_012775456.1;Name=WP_012775456.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937360.1;locus_tag=LIO31_RS09965;product=IS4 family transposase;protein_id=WP_012775456.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2011842 2012030 . - . ID=gene-LIO31_RS09970;Name=LIO31_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09970 NZ_CP085086.1 Protein Homology CDS 2011842 2012030 . - 0 ID=cds-WP_014636177.1;Parent=gene-LIO31_RS09970;Dbxref=Genbank:WP_014636177.1;Name=WP_014636177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636177.1;locus_tag=LIO31_RS09970;product=hypothetical protein;protein_id=WP_014636177.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2012064 2012504 . - . ID=gene-LIO31_RS09975;Name=LIO31_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09975 NZ_CP085086.1 Protein Homology CDS 2012064 2012504 . - 0 ID=cds-WP_012027998.1;Parent=gene-LIO31_RS09975;Dbxref=Genbank:WP_012027998.1;Name=WP_012027998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027998.1;locus_tag=LIO31_RS09975;product=DUF3021 domain-containing protein;protein_id=WP_012027998.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2012501 2012944 . - . ID=gene-LIO31_RS09980;Name=LIO31_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS09980 NZ_CP085086.1 Protein Homology CDS 2012501 2012944 . - 0 ID=cds-WP_012027999.1;Parent=gene-LIO31_RS09980;Dbxref=Genbank:WP_012027999.1;Name=WP_012027999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012027999.1;locus_tag=LIO31_RS09980;product=LytTR family transcriptional regulator;protein_id=WP_012027999.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2013076 2015616 . - . ID=gene-LIO31_RS09985;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LIO31_RS09985 NZ_CP085086.1 Protein Homology CDS 2013076 2015616 . - 0 ID=cds-WP_012775399.1;Parent=gene-LIO31_RS09985;Dbxref=Genbank:WP_012775399.1;Name=WP_012775399.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894103.1;locus_tag=LIO31_RS09985;product=DNA mismatch repair protein MutS;protein_id=WP_012775399.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2015631 2016071 . - . ID=gene-LIO31_RS09990;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=LIO31_RS09990 NZ_CP085086.1 Protein Homology CDS 2015631 2016071 . - 0 ID=cds-WP_002937036.1;Parent=gene-LIO31_RS09990;Dbxref=Genbank:WP_002937036.1;Name=WP_002937036.1;Ontology_term=GO:0006525;gbkey=CDS;gene=argR;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937036.1;locus_tag=LIO31_RS09990;product=arginine repressor;protein_id=WP_002937036.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2016178 2017866 . + . ID=gene-LIO31_RS09995;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LIO31_RS09995 NZ_CP085086.1 Protein Homology CDS 2016178 2017866 . + 0 ID=cds-WP_012028003.1;Parent=gene-LIO31_RS09995;Dbxref=Genbank:WP_012028003.1;Name=WP_012028003.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591476.1;locus_tag=LIO31_RS09995;product=arginine--tRNA ligase;protein_id=WP_012028003.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2018045 2018959 . + . ID=gene-LIO31_RS10000;Name=LIO31_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10000 NZ_CP085086.1 Protein Homology CDS 2018045 2018959 . + 0 ID=cds-WP_012775400.1;Parent=gene-LIO31_RS10000;Dbxref=Genbank:WP_012775400.1;Name=WP_012775400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736567.1;locus_tag=LIO31_RS10000;product=SH3 domain-containing protein;protein_id=WP_012775400.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2019012 2019533 . - . ID=gene-LIO31_RS10005;Name=LIO31_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10005 NZ_CP085086.1 Protein Homology CDS 2019012 2019533 . - 0 ID=cds-WP_012775401.1;Parent=gene-LIO31_RS10005;Dbxref=Genbank:WP_012775401.1;Name=WP_012775401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937042.1;locus_tag=LIO31_RS10005;product=hypothetical protein;protein_id=WP_012775401.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2019645 2019827 . + . ID=gene-LIO31_RS10010;Name=LIO31_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10010 NZ_CP085086.1 Protein Homology CDS 2019645 2019827 . + 0 ID=cds-WP_002937045.1;Parent=gene-LIO31_RS10010;Dbxref=Genbank:WP_002937045.1;Name=WP_002937045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002937045.1;locus_tag=LIO31_RS10010;product=hypothetical protein;protein_id=WP_002937045.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2019870 2021387 . - . ID=gene-LIO31_RS10015;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LIO31_RS10015 NZ_CP085086.1 Protein Homology CDS 2019870 2021387 . - 0 ID=cds-WP_012028588.1;Parent=gene-LIO31_RS10015;Dbxref=Genbank:WP_012028588.1;Name=WP_012028588.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028588.1;locus_tag=LIO31_RS10015;product=4-alpha-glucanotransferase;protein_id=WP_012028588.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2021690 2022949 . + . ID=gene-LIO31_RS10020;Name=LIO31_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10020 NZ_CP085086.1 Protein Homology CDS 2021690 2022949 . + 0 ID=cds-WP_002936107.1;Parent=gene-LIO31_RS10020;Dbxref=Genbank:WP_002936107.1;Name=WP_002936107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941908.1;locus_tag=LIO31_RS10020;product=extracellular solute-binding protein;protein_id=WP_002936107.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2023162 2024457 . + . ID=gene-LIO31_RS10025;Name=LIO31_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10025 NZ_CP085086.1 Protein Homology CDS 2023162 2024457 . + 0 ID=cds-WP_012028009.1;Parent=gene-LIO31_RS10025;Dbxref=Genbank:WP_012028009.1;Name=WP_012028009.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027817.1;locus_tag=LIO31_RS10025;product=sugar ABC transporter permease;protein_id=WP_012028009.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2024459 2025301 . + . ID=gene-LIO31_RS10030;Name=LIO31_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10030 NZ_CP085086.1 Protein Homology CDS 2024459 2025301 . + 0 ID=cds-WP_002936115.1;Parent=gene-LIO31_RS10030;Dbxref=Genbank:WP_002936115.1;Name=WP_002936115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001065636.1;locus_tag=LIO31_RS10030;product=sugar ABC transporter permease;protein_id=WP_002936115.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2025433 2026146 . + . ID=gene-LIO31_RS10035;Name=LIO31_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10035 NZ_CP085086.1 Protein Homology CDS 2025433 2026146 . + 0 ID=cds-WP_226960418.1;Parent=gene-LIO31_RS10035;Dbxref=Genbank:WP_226960418.1;Name=WP_226960418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445375.1;locus_tag=LIO31_RS10035;product=hypothetical protein;protein_id=WP_226960418.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2026156 2027139 . + . ID=gene-LIO31_RS10040;Name=LIO31_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10040 NZ_CP085086.1 Protein Homology CDS 2026156 2027139 . + 0 ID=cds-WP_002936122.1;Parent=gene-LIO31_RS10040;Dbxref=Genbank:WP_002936122.1;Name=WP_002936122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941885.1;locus_tag=LIO31_RS10040;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002936122.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2027163 2029214 . + . ID=gene-LIO31_RS10045;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=LIO31_RS10045 NZ_CP085086.1 Protein Homology CDS 2027163 2029214 . + 0 ID=cds-WP_023371838.1;Parent=gene-LIO31_RS10045;Dbxref=Genbank:WP_023371838.1;Name=WP_023371838.1;Ontology_term=GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445376.1;locus_tag=LIO31_RS10045;product=type I pullulanase;protein_id=WP_023371838.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2029367 2029819 . - . ID=gene-LIO31_RS10050;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=LIO31_RS10050 NZ_CP085086.1 Protein Homology CDS 2029367 2029819 . - 0 ID=cds-WP_002941880.1;Parent=gene-LIO31_RS10050;Dbxref=Genbank:WP_002941880.1;Name=WP_002941880.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941880.1;locus_tag=LIO31_RS10050;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_002941880.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2029896 2030828 . - . ID=gene-LIO31_RS10055;Name=LIO31_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10055 NZ_CP085086.1 Protein Homology CDS 2029896 2030828 . - 0 ID=cds-WP_002936128.1;Parent=gene-LIO31_RS10055;Dbxref=Genbank:WP_002936128.1;Name=WP_002936128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936128.1;locus_tag=LIO31_RS10055;product=YitT family protein;protein_id=WP_002936128.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2030821 2032572 . - . ID=gene-LIO31_RS10060;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LIO31_RS10060 NZ_CP085086.1 Protein Homology CDS 2030821 2032572 . - 0 ID=cds-WP_012775708.1;Parent=gene-LIO31_RS10060;Dbxref=Genbank:WP_012775708.1;Name=WP_012775708.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028014.1;locus_tag=LIO31_RS10060;product=aspartate--tRNA ligase;protein_id=WP_012775708.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2032668 2033120 . - . ID=gene-LIO31_RS10065;Name=LIO31_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10065 NZ_CP085086.1 Protein Homology CDS 2032668 2033120 . - 0 ID=cds-WP_012775709.1;Parent=gene-LIO31_RS10065;Dbxref=Genbank:WP_012775709.1;Name=WP_012775709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638825.1;locus_tag=LIO31_RS10065;product=GNAT family N-acetyltransferase;protein_id=WP_012775709.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2033130 2034041 . - . ID=gene-LIO31_RS10070;Name=LIO31_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10070 NZ_CP085086.1 Protein Homology CDS 2033130 2034041 . - 0 ID=cds-WP_074389929.1;Parent=gene-LIO31_RS10070;Dbxref=Genbank:WP_074389929.1;Name=WP_074389929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936131.1;locus_tag=LIO31_RS10070;product=aldo/keto reductase;protein_id=WP_074389929.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2034111 2035124 . - . ID=gene-LIO31_RS10075;Name=LIO31_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10075 NZ_CP085086.1 Protein Homology CDS 2034111 2035124 . - 0 ID=cds-WP_014636535.1;Parent=gene-LIO31_RS10075;Dbxref=Genbank:WP_014636535.1;Name=WP_014636535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377584.1;locus_tag=LIO31_RS10075;product=glycosyltransferase;protein_id=WP_014636535.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2035169 2037568 . - . ID=gene-LIO31_RS10080;Name=LIO31_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10080 NZ_CP085086.1 Protein Homology CDS 2035169 2037568 . - 0 ID=cds-WP_074389938.1;Parent=gene-LIO31_RS10080;Dbxref=Genbank:WP_074389938.1;Name=WP_074389938.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775458.1;locus_tag=LIO31_RS10080;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_074389938.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2037930 2038409 . - . ID=gene-LIO31_RS10085;Name=LIO31_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10085 NZ_CP085086.1 Protein Homology CDS 2037930 2038409 . - 0 ID=cds-WP_012775404.1;Parent=gene-LIO31_RS10085;Dbxref=Genbank:WP_012775404.1;Name=WP_012775404.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377592.1;locus_tag=LIO31_RS10085;product=GtrA family protein;protein_id=WP_012775404.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2038448 2041357 . - . ID=gene-LIO31_RS10090;Name=LIO31_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10090 NZ_CP085086.1 Protein Homology CDS 2038448 2041357 . - 0 ID=cds-WP_074389559.1;Parent=gene-LIO31_RS10090;Dbxref=Genbank:WP_074389559.1;Name=WP_074389559.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028020.1;locus_tag=LIO31_RS10090;product=glycoside hydrolase family 3 protein;protein_id=WP_074389559.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2041596 2042309 . + . ID=gene-LIO31_RS10095;Name=LIO31_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10095 NZ_CP085086.1 Protein Homology CDS 2041596 2042309 . + 0 ID=cds-WP_023371854.1;Parent=gene-LIO31_RS10095;Dbxref=Genbank:WP_023371854.1;Name=WP_023371854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736580.1;locus_tag=LIO31_RS10095;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_023371854.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2042306 2043613 . + . ID=gene-LIO31_RS10100;Name=LIO31_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10100 NZ_CP085086.1 Protein Homology CDS 2042306 2043613 . + 0 ID=cds-WP_024405885.1;Parent=gene-LIO31_RS10100;Dbxref=Genbank:WP_024405885.1;Name=WP_024405885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736581.1;locus_tag=LIO31_RS10100;product=ATP-binding protein;protein_id=WP_024405885.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2043791 2045137 . - . ID=gene-LIO31_RS10105;Name=LIO31_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10105 NZ_CP085086.1 Protein Homology CDS 2043791 2045137 . - 0 ID=cds-WP_074389561.1;Parent=gene-LIO31_RS10105;Dbxref=Genbank:WP_074389561.1;Name=WP_074389561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028594.1;locus_tag=LIO31_RS10105;product=metallophosphoesterase;protein_id=WP_074389561.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2045223 2046740 . - . ID=gene-LIO31_RS10110;Name=LIO31_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10110 NZ_CP085086.1 Protein Homology CDS 2045223 2046740 . - 0 ID=cds-WP_024405883.1;Parent=gene-LIO31_RS10110;Dbxref=Genbank:WP_024405883.1;Name=WP_024405883.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775406.1;locus_tag=LIO31_RS10110;product=flavocytochrome c;protein_id=WP_024405883.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2046873 2047322 . - . ID=gene-LIO31_RS10115;Name=LIO31_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10115 NZ_CP085086.1 Protein Homology CDS 2046873 2047322 . - 0 ID=cds-WP_012028596.1;Parent=gene-LIO31_RS10115;Dbxref=Genbank:WP_012028596.1;Name=WP_012028596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028028.1;locus_tag=LIO31_RS10115;product=thiol reductase thioredoxin;protein_id=WP_012028596.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2047388 2047999 . - . ID=gene-LIO31_RS10120;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LIO31_RS10120 NZ_CP085086.1 Protein Homology CDS 2047388 2047999 . - 0 ID=cds-WP_002938227.1;Parent=gene-LIO31_RS10120;Dbxref=Genbank:WP_002938227.1;Name=WP_002938227.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=LIO31_RS10120;product=30S ribosomal protein S4;protein_id=WP_002938227.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2048307 2048558 . - . ID=gene-LIO31_RS10125;Name=LIO31_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10125 NZ_CP085086.1 Protein Homology CDS 2048307 2048558 . - 0 ID=cds-WP_002938218.1;Parent=gene-LIO31_RS10125;Dbxref=Genbank:WP_002938218.1;Name=WP_002938218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002262439.1;locus_tag=LIO31_RS10125;product=hypothetical protein;protein_id=WP_002938218.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2048562 2049917 . - . ID=gene-LIO31_RS10130;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LIO31_RS10130 NZ_CP085086.1 Protein Homology CDS 2048562 2049917 . - 0 ID=cds-WP_012028597.1;Parent=gene-LIO31_RS10130;Dbxref=Genbank:WP_012028597.1;Name=WP_012028597.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938217.1;locus_tag=LIO31_RS10130;product=replicative DNA helicase;protein_id=WP_012028597.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2049949 2050401 . - . ID=gene-LIO31_RS10135;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LIO31_RS10135 NZ_CP085086.1 Protein Homology CDS 2049949 2050401 . - 0 ID=cds-WP_012775408.1;Parent=gene-LIO31_RS10135;Dbxref=Genbank:WP_012775408.1;Name=WP_012775408.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638832.1;locus_tag=LIO31_RS10135;product=50S ribosomal protein L9;protein_id=WP_012775408.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2050412 2052373 . - . ID=gene-LIO31_RS10140;Name=LIO31_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10140 NZ_CP085086.1 Protein Homology CDS 2050412 2052373 . - 0 ID=cds-WP_024402513.1;Parent=gene-LIO31_RS10140;Dbxref=Genbank:WP_024402513.1;Name=WP_024402513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938215.1;locus_tag=LIO31_RS10140;product=DHH family phosphoesterase;protein_id=WP_024402513.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2052480 2054396 . - . ID=gene-LIO31_RS10145;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LIO31_RS10145 NZ_CP085086.1 Protein Homology CDS 2052480 2054396 . - 0 ID=cds-WP_226960911.1;Parent=gene-LIO31_RS10145;Dbxref=Genbank:WP_226960911.1;Name=WP_226960911.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028034.1;locus_tag=LIO31_RS10145;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_226960911.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2054393 2054854 . - . ID=gene-LIO31_RS10150;Name=LIO31_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10150 NZ_CP085086.1 Protein Homology CDS 2054393 2054854 . - 0 ID=cds-WP_012775410.1;Parent=gene-LIO31_RS10150;Dbxref=Genbank:WP_012775410.1;Name=WP_012775410.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012775410.1;locus_tag=LIO31_RS10150;product=NUDIX domain-containing protein;protein_id=WP_012775410.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2054844 2055275 . - . ID=gene-LIO31_RS10155;Name=LIO31_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10155 NZ_CP085086.1 Protein Homology CDS 2054844 2055275 . - 0 ID=cds-WP_012028037.1;Parent=gene-LIO31_RS10155;Dbxref=Genbank:WP_012028037.1;Name=WP_012028037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028037.1;locus_tag=LIO31_RS10155;product=NUDIX hydrolase;protein_id=WP_012028037.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2055292 2055744 . - . ID=gene-LIO31_RS10160;Name=LIO31_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10160 NZ_CP085086.1 Protein Homology CDS 2055292 2055744 . - 0 ID=cds-WP_012775411.1;Parent=gene-LIO31_RS10160;Dbxref=Genbank:WP_012775411.1;Name=WP_012775411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736589.1;locus_tag=LIO31_RS10160;product=NUDIX hydrolase;protein_id=WP_012775411.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2055886 2056212 . - . ID=gene-LIO31_RS10165;Name=LIO31_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10165 NZ_CP085086.1 Protein Homology CDS 2055886 2056212 . - 0 ID=cds-WP_014638837.1;Parent=gene-LIO31_RS10165;Dbxref=Genbank:WP_014638837.1;Name=WP_014638837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638837.1;locus_tag=LIO31_RS10165;product=helix-turn-helix transcriptional regulator;protein_id=WP_014638837.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2056337 2056726 . + . ID=gene-LIO31_RS10170;Name=LIO31_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10170 NZ_CP085086.1 Protein Homology CDS 2056337 2056726 . + 0 ID=cds-WP_002941856.1;Parent=gene-LIO31_RS10170;Dbxref=Genbank:WP_002941856.1;Name=WP_002941856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106206.1;locus_tag=LIO31_RS10170;product=nuclear transport factor 2 family protein;protein_id=WP_002941856.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2056769 2057893 . - . ID=gene-LIO31_RS10175;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LIO31_RS10175 NZ_CP085086.1 Protein Homology CDS 2056769 2057893 . - 0 ID=cds-WP_012028041.1;Parent=gene-LIO31_RS10175;Dbxref=Genbank:WP_012028041.1;Name=WP_012028041.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153390.1;locus_tag=LIO31_RS10175;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_012028041.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2058108 2058779 . + . ID=gene-LIO31_RS10180;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=LIO31_RS10180 NZ_CP085086.1 Protein Homology CDS 2058108 2058779 . + 0 ID=cds-WP_002938202.1;Parent=gene-LIO31_RS10180;Dbxref=Genbank:WP_002938202.1;Name=WP_002938202.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647570.1;locus_tag=LIO31_RS10180;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_002938202.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2058792 2059664 . + . ID=gene-LIO31_RS10185;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=LIO31_RS10185 NZ_CP085086.1 Protein Homology CDS 2058792 2059664 . + 0 ID=cds-WP_012028043.1;Parent=gene-LIO31_RS10185;Dbxref=Genbank:WP_012028043.1;Name=WP_012028043.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938200.1;locus_tag=LIO31_RS10185;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_012028043.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2060120 2060674 . - . ID=gene-LIO31_RS10190;Name=LIO31_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10190 NZ_CP085086.1 Protein Homology CDS 2060120 2060674 . - 0 ID=cds-WP_012775412.1;Parent=gene-LIO31_RS10190;Dbxref=Genbank:WP_012775412.1;Name=WP_012775412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911037.1;locus_tag=LIO31_RS10190;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_012775412.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2060806 2061600 . - . ID=gene-LIO31_RS10195;Name=LIO31_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10195 NZ_CP085086.1 Protein Homology CDS 2060806 2061600 . - 0 ID=cds-WP_002938197.1;Parent=gene-LIO31_RS10195;Dbxref=Genbank:WP_002938197.1;Name=WP_002938197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938197.1;locus_tag=LIO31_RS10195;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WP_002938197.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2061593 2062435 . - . ID=gene-LIO31_RS10200;Name=LIO31_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10200 NZ_CP085086.1 Protein Homology CDS 2061593 2062435 . - 0 ID=cds-WP_002938195.1;Parent=gene-LIO31_RS10200;Dbxref=Genbank:WP_002938195.1;Name=WP_002938195.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002938195.1;locus_tag=LIO31_RS10200;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_002938195.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2062411 2063247 . - . ID=gene-LIO31_RS10205;Name=LIO31_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10205 NZ_CP085086.1 Protein Homology CDS 2062411 2063247 . - 0 ID=cds-WP_002941820.1;Parent=gene-LIO31_RS10205;Dbxref=Genbank:WP_002941820.1;Name=WP_002941820.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941820.1;locus_tag=LIO31_RS10205;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_002941820.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2063244 2063783 . - . ID=gene-LIO31_RS10210;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LIO31_RS10210 NZ_CP085086.1 Protein Homology CDS 2063244 2063783 . - 0 ID=cds-WP_012028045.1;Parent=gene-LIO31_RS10210;Dbxref=Genbank:WP_012028045.1;Name=WP_012028045.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941818.1;locus_tag=LIO31_RS10210;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_012028045.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2063793 2064650 . - . ID=gene-LIO31_RS10215;Name=LIO31_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10215 NZ_CP085086.1 Protein Homology CDS 2063793 2064650 . - 0 ID=cds-WP_023371884.1;Parent=gene-LIO31_RS10215;Dbxref=Genbank:WP_023371884.1;Name=WP_023371884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736597.1;locus_tag=LIO31_RS10215;product=helix-turn-helix domain-containing protein;protein_id=WP_023371884.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2064732 2066015 . - . ID=gene-LIO31_RS10220;Name=LIO31_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10220 NZ_CP085086.1 Protein Homology CDS 2064732 2066015 . - 0 ID=cds-WP_012775413.1;Parent=gene-LIO31_RS10220;Dbxref=Genbank:WP_012775413.1;Name=WP_012775413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941810.1;locus_tag=LIO31_RS10220;product=insulinase family protein;protein_id=WP_012775413.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2066012 2067265 . - . ID=gene-LIO31_RS10225;Name=LIO31_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10225 NZ_CP085086.1 Protein Homology CDS 2066012 2067265 . - 0 ID=cds-WP_012028048.1;Parent=gene-LIO31_RS10225;Dbxref=Genbank:WP_012028048.1;Name=WP_012028048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939067.1;locus_tag=LIO31_RS10225;product=insulinase family protein;protein_id=WP_012028048.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2067339 2067722 . + . ID=gene-LIO31_RS10230;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LIO31_RS10230 NZ_CP085086.1 Protein Homology CDS 2067339 2067722 . + 0 ID=cds-WP_012028049.1;Parent=gene-LIO31_RS10230;Dbxref=Genbank:WP_012028049.1;Name=WP_012028049.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736600.1;locus_tag=LIO31_RS10230;product=S4 domain-containing protein YaaA;protein_id=WP_012028049.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2067725 2068819 . + . ID=gene-LIO31_RS10235;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LIO31_RS10235 NZ_CP085086.1 Protein Homology CDS 2067725 2068819 . + 0 ID=cds-WP_012028050.1;Parent=gene-LIO31_RS10235;Dbxref=Genbank:WP_012028050.1;Name=WP_012028050.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638862.1;locus_tag=LIO31_RS10235;product=DNA replication/repair protein RecF;protein_id=WP_012028050.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2069091 2070572 . - . ID=gene-LIO31_RS10240;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LIO31_RS10240 NZ_CP085086.1 Protein Homology CDS 2069091 2070572 . - 0 ID=cds-WP_012028051.1;Parent=gene-LIO31_RS10240;Dbxref=Genbank:WP_012028051.1;Name=WP_012028051.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003090086.1;locus_tag=LIO31_RS10240;product=IMP dehydrogenase;protein_id=WP_012028051.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2070804 2071829 . - . ID=gene-LIO31_RS10245;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LIO31_RS10245 NZ_CP085086.1 Protein Homology CDS 2070804 2071829 . - 0 ID=cds-WP_012775414.1;Parent=gene-LIO31_RS10245;Dbxref=Genbank:WP_012775414.1;Name=WP_012775414.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013730696.1;locus_tag=LIO31_RS10245;product=tryptophan--tRNA ligase;protein_id=WP_012775414.1;transl_table=11 NZ_CP085086.1 cmsearch binding_site 2071876 2072082 . - . ID=id-NZ_CP085086.1:2071876..2072082;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP085086.1 RefSeq gene 2072184 2073056 . + . ID=gene-LIO31_RS10250;Name=LIO31_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10250 NZ_CP085086.1 Protein Homology CDS 2072184 2073056 . + 0 ID=cds-WP_012775460.1;Parent=gene-LIO31_RS10250;Dbxref=Genbank:WP_012775460.1;Name=WP_012775460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014636538.1;locus_tag=LIO31_RS10250;product=YitT family protein;protein_id=WP_012775460.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2073121 2074743 . + . ID=gene-LIO31_RS10255;Name=LIO31_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10255 NZ_CP085086.1 Protein Homology CDS 2073121 2074743 . + 0 ID=cds-WP_012775415.1;Parent=gene-LIO31_RS10255;Dbxref=Genbank:WP_012775415.1;Name=WP_012775415.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015647592.1;locus_tag=LIO31_RS10255;product=ATP-binding cassette domain-containing protein;protein_id=WP_012775415.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2075050 2077629 . + . ID=gene-LIO31_RS10260;Name=LIO31_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10260 NZ_CP085086.1 Protein Homology CDS 2075050 2077629 . + 0 ID=cds-WP_012028056.1;Parent=gene-LIO31_RS10260;Dbxref=Genbank:WP_012028056.1;Name=WP_012028056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014638868.1;locus_tag=LIO31_RS10260;product=YfhO family protein;protein_id=WP_012028056.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2077698 2077770 . - . ID=gene-LIO31_RS10265;Name=LIO31_RS10265;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS10265 NZ_CP085086.1 tRNAscan-SE tRNA 2077698 2077770 . - . ID=rna-LIO31_RS10265;Parent=gene-LIO31_RS10265;anticodon=(pos:complement(2077735..2077737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10265;product=tRNA-Asn NZ_CP085086.1 tRNAscan-SE exon 2077698 2077770 . - . ID=exon-LIO31_RS10265-1;Parent=rna-LIO31_RS10265;anticodon=(pos:complement(2077735..2077737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10265;product=tRNA-Asn NZ_CP085086.1 RefSeq gene 2077776 2077847 . - . ID=gene-LIO31_RS10270;Name=LIO31_RS10270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS10270 NZ_CP085086.1 tRNAscan-SE tRNA 2077776 2077847 . - . ID=rna-LIO31_RS10270;Parent=gene-LIO31_RS10270;anticodon=(pos:complement(2077812..2077814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10270;product=tRNA-Glu NZ_CP085086.1 tRNAscan-SE exon 2077776 2077847 . - . ID=exon-LIO31_RS10270-1;Parent=rna-LIO31_RS10270;anticodon=(pos:complement(2077812..2077814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10270;product=tRNA-Glu NZ_CP085086.1 RefSeq gene 2077959 2078032 . + . ID=gene-LIO31_RS10275;Name=LIO31_RS10275;gbkey=Gene;gene_biotype=tRNA;locus_tag=LIO31_RS10275 NZ_CP085086.1 tRNAscan-SE tRNA 2077959 2078032 . + . ID=rna-LIO31_RS10275;Parent=gene-LIO31_RS10275;anticodon=(pos:2077993..2077995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10275;product=tRNA-Arg NZ_CP085086.1 tRNAscan-SE exon 2077959 2078032 . + . ID=exon-LIO31_RS10275-1;Parent=rna-LIO31_RS10275;anticodon=(pos:2077993..2077995);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LIO31_RS10275;product=tRNA-Arg NZ_CP085086.1 RefSeq gene 2078030 2078713 . - . ID=gene-LIO31_RS10280;Name=LIO31_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10280 NZ_CP085086.1 Protein Homology CDS 2078030 2078713 . - 0 ID=cds-WP_012775416.1;Parent=gene-LIO31_RS10280;Dbxref=Genbank:WP_012775416.1;Name=WP_012775416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194526.1;locus_tag=LIO31_RS10280;product=YoaK family protein;protein_id=WP_012775416.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2078738 2079217 . - . ID=gene-LIO31_RS10285;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LIO31_RS10285 NZ_CP085086.1 Protein Homology CDS 2078738 2079217 . - 0 ID=cds-WP_012028058.1;Parent=gene-LIO31_RS10285;Dbxref=Genbank:WP_012028058.1;Name=WP_012028058.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131080.1;locus_tag=LIO31_RS10285;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_012028058.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2079391 2080587 . + . ID=gene-LIO31_RS10290;Name=LIO31_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10290 NZ_CP085086.1 Protein Homology CDS 2079391 2080587 . + 0 ID=cds-WP_009911075.1;Parent=gene-LIO31_RS10290;Dbxref=Genbank:WP_009911075.1;Name=WP_009911075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014736606.1;locus_tag=LIO31_RS10290;product=trypsin-like peptidase domain-containing protein;protein_id=WP_009911075.1;transl_table=11 NZ_CP085086.1 RefSeq gene 2080648 2081412 . + . ID=gene-LIO31_RS10295;Name=LIO31_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LIO31_RS10295 NZ_CP085086.1 Protein Homology CDS 2080648 2081412 . + 0 ID=cds-WP_014638879.1;Parent=gene-LIO31_RS10295;Dbxref=Genbank:WP_014638879.1;Name=WP_014638879.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012028606.1;locus_tag=LIO31_RS10295;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_014638879.1;transl_table=11 ###