locus-tag class description STR_RS00005 PF00308 Bacterial dnaA protein STR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix STR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain STR_RS00010 PF02767 DNA polymerase III beta subunit, central domain STR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain STR_RS00020 PF06071 Protein of unknown function (DUF933) STR_RS00020 PF01926 50S ribosome-binding GTPase STR_RS00025 PF01195 Peptidyl-tRNA hydrolase STR_RS00030 PF17757 UvrB interaction domain STR_RS00030 PF00270 DEAD/DEAH box helicase STR_RS00030 PF02559 CarD-like/TRCF domain STR_RS00030 PF03461 TRCF domain STR_RS00030 PF00271 Helicase conserved C-terminal domain STR_RS00035 PF01479 S4 domain STR_RS00055 PF01171 PP-loop family STR_RS00060 PF00156 Phosphoribosyl transferase domain STR_RS00065 PF06480 FtsH Extracellular STR_RS00065 PF00004 ATPase family associated with various cellular activities (AAA) STR_RS00065 PF17862 AAA+ lid domain STR_RS00065 PF01434 Peptidase family M41 STR_RS00085 PF13333 Integrase core domain STR_RS00085 PF00665 Integrase core domain STR_RS00205 PF01476 LysM domain STR_RS00205 PF05257 CHAP domain STR_RS00210 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase STR_RS00210 PF14572 Phosphoribosyl synthetase-associated domain STR_RS00225 PF00155 Aminotransferase class I and II STR_RS00230 PF11967 Recombination protein O N terminal STR_RS00230 PF02565 Recombination protein O C terminal STR_RS00235 PF02504 Fatty acid synthesis protein STR_RS00240 PF00550 Phosphopantetheine attachment site STR_RS00245 PF01259 SAICAR synthetase STR_RS00250 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain STR_RS00250 PF02769 AIR synthase related protein, C-terminal domain STR_RS00250 PF00586 AIR synthase related protein, N-terminal domain STR_RS00255 PF00156 Phosphoribosyl transferase domain STR_RS00255 PF13537 Glutamine amidotransferase domain STR_RS00260 PF00586 AIR synthase related protein, N-terminal domain STR_RS00260 PF02769 AIR synthase related protein, C-terminal domain STR_RS00265 PF00551 Formyl transferase STR_RS00270 PF02142 MGS-like domain STR_RS00270 PF01808 AICARFT/IMPCHase bienzyme STR_RS00290 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain STR_RS00290 PF02844 Phosphoribosylglycinamide synthetase, N domain STR_RS00290 PF02843 Phosphoribosylglycinamide synthetase, C domain STR_RS00295 PF00731 AIR carboxylase STR_RS00300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain STR_RS00300 PF02222 ATP-grasp domain STR_RS00315 PF10397 Adenylosuccinate lyase C-terminus STR_RS00315 PF00206 Lyase STR_RS00320 PF03485 Arginyl tRNA synthetase N terminal domain STR_RS00320 PF00750 tRNA synthetases class I (R) STR_RS00320 PF05746 DALR anticodon binding domain STR_RS00325 PF01316 Arginine repressor, DNA binding domain STR_RS00325 PF02863 Arginine repressor, C-terminal domain STR_RS00330 PF06133 Control of competence regulator ComK, YlbF/YmcA STR_RS00335 PF01624 MutS domain I STR_RS00335 PF05188 MutS domain II STR_RS00335 PF05192 MutS domain III STR_RS00335 PF05190 MutS family domain IV STR_RS00335 PF00488 MutS domain V STR_RS00355 PF01119 DNA mismatch repair protein, C-terminal domain STR_RS00355 PF08676 MutL C terminal dimerisation domain STR_RS00365 PF07499 RuvA, C-terminal domain STR_RS00365 PF01330 RuvA N terminal domain STR_RS00375 PF00994 Probable molybdopterin binding domain STR_RS00375 PF18146 Damage-inducible protein CinA KH domain STR_RS00375 PF02464 Competence-damaged protein STR_RS00380 PF00154 recA bacterial DNA recombination protein STR_RS00385 PF03960 ArsC family STR_RS00470 PF07733 Bacterial DNA polymerase III alpha NTPase domain STR_RS00470 PF00929 Exonuclease STR_RS00470 PF02811 PHP domain STR_RS00470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STR_RS00470 PF11490 DNA polymerase III polC-type N-terminus II STR_RS00470 PF14480 DNA polymerase III polC-type N-terminus I STR_RS00470 PF14579 Helix-hairpin-helix motif STR_RS00475 PF02073 Thermophilic metalloprotease (M29) STR_RS00490 PF03358 NADPH-dependent FMN reductase STR_RS00495 PF00665 Integrase core domain STR_RS00495 PF13276 HTH-like domain STR_RS00495 PF13333 Integrase core domain STR_RS00515 PF17676 LD-carboxypeptidase C-terminal domain STR_RS00515 PF02016 LD-carboxypeptidase N-terminal domain STR_RS00525 PF00318 Ribosomal protein S2 STR_RS00530 PF00889 Elongation factor TS STR_RS00540 PF05848 CtsR N-terminal HTH domain STR_RS00540 PF17727 CtsR C-terminal dimerization domain STR_RS00545 PF00004 ATPase family associated with various cellular activities (AAA) STR_RS00545 PF07724 AAA domain (Cdc48 subfamily) STR_RS00545 PF17871 AAA lid domain STR_RS00545 PF10431 C-terminal, D2-small domain, of ClpB protein STR_RS00545 PF02861 Clp amino terminal domain, pathogenicity island component STR_RS00555 PF00768 D-alanyl-D-alanine carboxypeptidase STR_RS00555 PF07943 Penicillin-binding protein 5, C-terminal domain STR_RS00560 PF00575 S1 RNA binding domain STR_RS00560 PF03725 3' exoribonuclease family, domain 2 STR_RS00560 PF01138 3' exoribonuclease family, domain 1 STR_RS00560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain STR_RS00560 PF00013 KH domain STR_RS00570 PF00132 Bacterial transferase hexapeptide (six repeats) STR_RS00575 PF01406 tRNA synthetases class I (C) catalytic domain STR_RS00575 PF09190 DALR domain STR_RS00580 PF00636 Ribonuclease III domain STR_RS00590 PF00588 SpoU rRNA Methylase family STR_RS00590 PF08032 RNA 2'-O ribose methyltransferase substrate binding STR_RS00600 PF02645 Uncharacterised protein, DegV family COG1307 STR_RS00615 PF00572 Ribosomal protein L13 STR_RS00620 PF00380 Ribosomal protein S9/S16 STR_RS00640 PF05147 Lanthionine synthetase C-like protein STR_RS00675 PF05257 CHAP domain STR_RS00675 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase STR_RS00690 PF09587 Bacterial capsule synthesis protein PGA_cap STR_RS00705 PF05167 Uncharacterised ACR (DUF711) STR_RS00710 PF00300 Histidine phosphatase superfamily (branch 1) STR_RS00715 PF02557 D-alanyl-D-alanine carboxypeptidase STR_RS00725 PF01628 HrcA protein C terminal domain STR_RS00725 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding STR_RS00730 PF01025 GrpE STR_RS00735 PF00012 Hsp70 protein STR_RS00740 PF00226 DnaJ domain STR_RS00740 PF00684 DnaJ central domain STR_RS00740 PF01556 DnaJ C terminal domain STR_RS00745 PF01416 tRNA pseudouridine synthase STR_RS00750 PF08543 Phosphomethylpyrimidine kinase STR_RS00850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STR_RS00885 PF00924 Mechanosensitive ion channel STR_RS00890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase STR_RS00890 PF05697 Bacterial trigger factor protein (TF) STR_RS00890 PF05698 Bacterial trigger factor protein (TF) C-terminus STR_RS00895 PF05066 HB1, ASXL, restriction endonuclease HTH domain STR_RS00900 PF00117 Glutamine amidotransferase class-I STR_RS00900 PF06418 CTP synthase N-terminus STR_RS00920 PF04452 RNA methyltransferase STR_RS00930 PF02872 5'-nucleotidase, C-terminal domain STR_RS00930 PF00149 Calcineurin-like phosphoesterase STR_RS00935 PF00149 Calcineurin-like phosphoesterase STR_RS00935 PF02872 5'-nucleotidase, C-terminal domain STR_RS00940 PF07972 NrdI Flavodoxin like STR_RS00945 PF04607 Region found in RelA / SpoT proteins STR_RS00945 PF13291 ACT domain STR_RS00945 PF02824 TGS domain STR_RS00950 PF02580 D-Tyr-tRNA(Tyr) deacylase STR_RS00955 PF13199 Glycosyl hydrolase family 66 STR_RS00960 PF13199 Glycosyl hydrolase family 66 STR_RS00970 PF00291 Pyridoxal-phosphate dependent enzyme STR_RS00970 PF00585 C-terminal regulatory domain of Threonine dehydratase STR_RS00975 PF01327 Polypeptide deformylase STR_RS00990 PF00312 Ribosomal protein S15 STR_RS01000 PF00005 ABC transporter STR_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS01010 PF02673 Bacitracin resistance protein BacA STR_RS01015 PF05389 Negative regulator of genetic competence (MecA) STR_RS01020 PF00953 Glycosyl transferase family 4 STR_RS01025 PF00005 ABC transporter STR_RS01030 PF01458 Uncharacterized protein family (UPF0051) STR_RS01035 PF00266 Aminotransferase class-V STR_RS01040 PF01592 NifU-like N terminal domain STR_RS01045 PF01458 Uncharacterized protein family (UPF0051) STR_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS01070 PF00005 ABC transporter STR_RS01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS01075 PF00005 ABC transporter STR_RS01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS01080 PF00005 ABC transporter STR_RS01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS01090 PF01430 Hsp33 protein STR_RS01095 PF01207 Dihydrouridine synthase (Dus) STR_RS01115 PF01047 MarR family STR_RS01120 PF00005 ABC transporter STR_RS01125 PF00950 ABC 3 transport family STR_RS01135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS01135 PF02378 Phosphotransferase system, EIIC STR_RS01135 PF00367 phosphotransferase system, EIIB STR_RS01140 PF00367 phosphotransferase system, EIIB STR_RS01140 PF02378 Phosphotransferase system, EIIC STR_RS01140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS01145 PF00367 phosphotransferase system, EIIB STR_RS01145 PF02378 Phosphotransferase system, EIIC STR_RS01145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS01150 PF00367 phosphotransferase system, EIIB STR_RS01150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS01150 PF02378 Phosphotransferase system, EIIC STR_RS01155 PF03372 Endonuclease/Exonuclease/phosphatase family STR_RS01160 PF00342 Phosphoglucose isomerase STR_RS01165 PF01709 Transcriptional regulator STR_RS01175 PF01255 Putative undecaprenyl diphosphate synthase STR_RS01185 PF02163 Peptidase family M50 STR_RS01185 PF13180 PDZ domain STR_RS01190 PF04073 Aminoacyl-tRNA editing domain STR_RS01190 PF03129 Anticodon binding domain STR_RS01190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STR_RS01195 PF02653 Branched-chain amino acid transport system / permease component STR_RS01200 PF00005 ABC transporter STR_RS01205 PF00166 Chaperonin 10 Kd subunit STR_RS01210 PF00118 TCP-1/cpn60 chaperonin family STR_RS01225 PF00665 Integrase core domain STR_RS01225 PF13333 Integrase core domain STR_RS01240 PF01479 S4 domain STR_RS01240 PF00849 RNA pseudouridylate synthase STR_RS01245 PF00905 Penicillin binding protein transpeptidase domain STR_RS01245 PF00912 Transglycosylase STR_RS01255 PF00467 KOW motif STR_RS01255 PF02357 Transcription termination factor nusG STR_RS01260 PF01569 PAP2 superfamily STR_RS01270 PF00455 DeoR C terminal sensor domain STR_RS01270 PF08220 DeoR-like helix-turn-helix domain STR_RS01275 PF13603 Leucyl-tRNA synthetase, Domain 2 STR_RS01275 PF00133 tRNA synthetases class I (I, L, M and V) STR_RS01275 PF08264 Anticodon-binding domain of tRNA STR_RS01275 PF09334 tRNA synthetases class I (M) STR_RS01300 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain STR_RS01300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain STR_RS01300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family STR_RS01305 PF02540 NAD synthase STR_RS01315 PF03051 Peptidase C1-like family STR_RS01320 PF00905 Penicillin binding protein transpeptidase domain STR_RS01320 PF00912 Transglycosylase STR_RS01325 PF03838 Recombination protein U STR_RS01330 PF06908 YspA SLOG family STR_RS01335 PF05103 DivIVA protein STR_RS01340 PF02926 THUMP domain STR_RS01340 PF01170 Putative RNA methylase family UPF0020 STR_RS01345 PF18708 MapZ extracellular C-terminal domain 2 STR_RS01345 PF18041 MapZ extracellular domain 1 STR_RS01355 PF00176 SNF2 family N-terminal domain STR_RS01355 PF00271 Helicase conserved C-terminal domain STR_RS01355 PF12419 SNF2 Helicase protein STR_RS01365 PF01225 Mur ligase family, catalytic domain STR_RS01365 PF02875 Mur ligase family, glutamate ligase domain STR_RS01365 PF08245 Mur ligase middle domain STR_RS01375 PF02618 YceG-like family STR_RS01380 PF01272 Transcription elongation factor, GreA/GreB, C-term STR_RS01380 PF03449 Transcription elongation factor, N-terminal STR_RS01390 PF13333 Integrase core domain STR_RS01390 PF00665 Integrase core domain STR_RS01395 PF02096 60Kd inner membrane protein STR_RS01400 PF00708 Acylphosphatase STR_RS01405 PF08032 RNA 2'-O ribose methyltransferase substrate binding STR_RS01405 PF00588 SpoU rRNA Methylase family STR_RS01415 PF01027 Inhibitor of apoptosis-promoting Bax1 STR_RS01425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain STR_RS01425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain STR_RS01435 PF03672 Uncharacterised protein family (UPF0154) STR_RS01440 PF01177 Asp/Glu/Hydantoin racemase STR_RS01445 PF01725 Ham1 family STR_RS01460 PF00589 Phage integrase family STR_RS01465 PF02616 Segregation and condensation protein ScpA STR_RS01470 PF04079 Segregation and condensation complex subunit ScpB STR_RS01475 PF01479 S4 domain STR_RS01475 PF00849 RNA pseudouridylate synthase STR_RS01480 PF01809 Putative membrane protein insertion efficiency factor STR_RS01485 PF02386 Cation transport protein STR_RS01490 PF02254 TrkA-N domain STR_RS01490 PF02080 TrkA-C domain STR_RS01495 PF00588 SpoU rRNA Methylase family STR_RS01500 PF12822 ECF transporter, substrate-specific component STR_RS01505 PF01569 PAP2 superfamily STR_RS01520 PF00664 ABC transporter transmembrane region STR_RS01520 PF00005 ABC transporter STR_RS01520 PF03412 Peptidase C39 family STR_RS01525 PF03412 Peptidase C39 family STR_RS01525 PF00005 ABC transporter STR_RS01525 PF00664 ABC transporter transmembrane region STR_RS01530 PF03412 Peptidase C39 family STR_RS01530 PF00664 ABC transporter transmembrane region STR_RS01530 PF00005 ABC transporter STR_RS01535 PF00664 ABC transporter transmembrane region STR_RS01535 PF00005 ABC transporter STR_RS01535 PF03412 Peptidase C39 family STR_RS01550 PF02293 AmiS/UreI family transporter STR_RS01555 PF00547 Urease, gamma subunit STR_RS01560 PF00699 Urease beta subunit STR_RS01565 PF00449 Urease alpha-subunit, N-terminal domain STR_RS01565 PF01979 Amidohydrolase family STR_RS01570 PF05194 UreE urease accessory protein, C-terminal domain STR_RS01570 PF02814 UreE urease accessory protein, N-terminal domain STR_RS01575 PF01730 UreF STR_RS01580 PF02492 CobW/HypB/UreG, nucleotide-binding domain STR_RS01585 PF01774 UreD urease accessory protein STR_RS01590 PF01891 Cobalt uptake substrate-specific transmembrane region STR_RS01590 PF13190 PDGLE domain STR_RS01600 PF00005 ABC transporter STR_RS01605 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS01610 PF03180 NLPA lipoprotein STR_RS01620 PF00005 ABC transporter STR_RS01620 PF09383 NIL domain STR_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS01630 PF00375 Sodium:dicarboxylate symporter family STR_RS01640 PF07155 ECF-type riboflavin transporter, S component STR_RS01645 PF12558 ATP-binding cassette cobalt transporter STR_RS01645 PF00005 ABC transporter STR_RS01655 PF02780 Transketolase, C-terminal domain STR_RS01655 PF02779 Transketolase, pyrimidine binding domain STR_RS01655 PF00456 Transketolase, thiamine diphosphate binding domain STR_RS01665 PF02386 Cation transport protein STR_RS01670 PF02527 rRNA small subunit methyltransferase G STR_RS01680 PF00072 Response regulator receiver domain STR_RS01680 PF00486 Transcriptional regulatory protein, C terminal STR_RS01685 PF00512 His Kinase A (phospho-acceptor) domain STR_RS01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS01685 PF18719 ArlS sensor domain STR_RS01690 PF03477 ATP cone domain STR_RS01700 PF01695 IstB-like ATP binding protein STR_RS01700 PF07319 Primosomal protein DnaI N-terminus STR_RS01705 PF01926 50S ribosome-binding GTPase STR_RS01705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal STR_RS01715 PF00005 ABC transporter STR_RS01715 PF00664 ABC transporter transmembrane region STR_RS01730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STR_RS01730 PF02403 Seryl-tRNA synthetase N-terminal domain STR_RS01740 PF03613 PTS system mannose/fructose/sorbose family IID component STR_RS01745 PF03609 PTS system sorbose-specific iic component STR_RS01750 PF03830 PTS system sorbose subfamily IIB component STR_RS01750 PF03610 PTS system fructose IIA component STR_RS01765 PF00860 Permease family STR_RS01770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE STR_RS01775 PF13302 Acetyltransferase (GNAT) domain STR_RS01780 PF03816 Cell envelope-related transcriptional attenuator domain STR_RS01785 PF02576 RimP N-terminal domain STR_RS01785 PF17384 RimP C-terminal SH3 domain STR_RS01790 PF00575 S1 RNA binding domain STR_RS01790 PF08529 NusA N-terminal domain STR_RS01790 PF13184 NusA-like KH domain STR_RS01795 PF04296 Protein of unknown function (DUF448) STR_RS01800 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family STR_RS01805 PF00009 Elongation factor Tu GTP binding domain STR_RS01805 PF11987 Translation-initiation factor 2 STR_RS01805 PF04760 Translation initiation factor IF-2, N-terminal region STR_RS01810 PF02033 Ribosome-binding factor A STR_RS01815 PF03641 Possible lysine decarboxylase STR_RS01820 PF03641 Possible lysine decarboxylase STR_RS01830 PF02875 Mur ligase family, glutamate ligase domain STR_RS01830 PF08245 Mur ligase middle domain STR_RS01835 PF01943 Polysaccharide biosynthesis protein STR_RS01835 PF14667 Polysaccharide biosynthesis C-terminal domain STR_RS01845 PF01053 Cys/Met metabolism PLP-dependent enzyme STR_RS01850 PF00155 Aminotransferase class I and II STR_RS01865 PF00574 Clp protease STR_RS01875 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) STR_RS01880 PF13458 Periplasmic binding protein STR_RS01885 PF02653 Branched-chain amino acid transport system / permease component STR_RS01890 PF02653 Branched-chain amino acid transport system / permease component STR_RS01890 PF11862 Domain of unknown function (DUF3382) STR_RS01895 PF12399 Branched-chain amino acid ATP-binding cassette transporter STR_RS01895 PF00005 ABC transporter STR_RS01900 PF00005 ABC transporter STR_RS01905 PF00571 CBS domain STR_RS01915 PF00291 Pyridoxal-phosphate dependent enzyme STR_RS01920 PF09186 Domain of unknown function (DUF1949) STR_RS01920 PF01205 Uncharacterized protein family UPF0029 STR_RS01925 PF00271 Helicase conserved C-terminal domain STR_RS01925 PF04851 Type III restriction enzyme, res subunit STR_RS01935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein STR_RS01935 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus STR_RS01995 PF01368 DHH family STR_RS01995 PF02833 DHHA2 domain STR_RS02005 PF04167 Protein of unknown function (DUF402) STR_RS02010 PF02631 RecX family STR_RS02015 PF01938 TRAM domain STR_RS02015 PF05958 tRNA (Uracil-5-)-methyltransferase STR_RS02020 PF03590 Aspartate-ammonia ligase STR_RS02025 PF13840 ACT domain STR_RS02025 PF00696 Amino acid kinase family STR_RS02030 PF13419 Haloacid dehalogenase-like hydrolase STR_RS02035 PF00378 Enoyl-CoA hydratase/isomerase STR_RS02040 PF01047 MarR family STR_RS02045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III STR_RS02045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal STR_RS02050 PF00550 Phosphopantetheine attachment site STR_RS02055 PF03060 Nitronate monooxygenase STR_RS02060 PF00698 Acyl transferase domain STR_RS02070 PF02801 Beta-ketoacyl synthase, C-terminal domain STR_RS02070 PF00109 Beta-ketoacyl synthase, N-terminal domain STR_RS02075 PF00364 Biotin-requiring enzyme STR_RS02080 PF07977 FabA-like domain STR_RS02085 PF02785 Biotin carboxylase C-terminal domain STR_RS02085 PF00289 Biotin carboxylase, N-terminal domain STR_RS02085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain STR_RS02090 PF01039 Carboxyl transferase domain STR_RS02090 PF17848 Acetyl-coA carboxylase zinc finger domain STR_RS02095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit STR_RS02100 PF02664 S-Ribosylhomocysteinase (LuxS) STR_RS02110 PF13610 DDE domain STR_RS02115 PF01966 HD domain STR_RS02115 PF00013 KH domain STR_RS02115 PF12072 Domain of unknown function (DUF3552) STR_RS02125 PF00455 DeoR C terminal sensor domain STR_RS02125 PF08220 DeoR-like helix-turn-helix domain STR_RS02130 PF00294 pfkB family carbohydrate kinase STR_RS02140 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS02140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STR_RS02145 PF02875 Mur ligase family, glutamate ligase domain STR_RS02145 PF08245 Mur ligase middle domain STR_RS02155 PF00266 Aminotransferase class-V STR_RS02160 PF02926 THUMP domain STR_RS02160 PF02568 Thiamine biosynthesis protein (ThiI) STR_RS02165 PF00534 Glycosyl transferases group 1 STR_RS02185 PF00829 Ribosomal prokaryotic L21 protein STR_RS02190 PF01016 Ribosomal L27 protein STR_RS02205 PF02645 Uncharacterised protein, DegV family COG1307 STR_RS02210 PF02645 Uncharacterised protein, DegV family COG1307 STR_RS02215 PF05173 Dihydrodipicolinate reductase, C-terminus STR_RS02215 PF01113 Dihydrodipicolinate reductase, N-terminus STR_RS02220 PF01743 Poly A polymerase head domain STR_RS02220 PF13735 tRNA nucleotidyltransferase domain 2 putative STR_RS02220 PF12627 Probable RNA and SrmB- binding site of polymerase A STR_RS02225 PF00005 ABC transporter STR_RS02225 PF12848 ABC transporter STR_RS02225 PF16326 ABC transporter C-terminal domain STR_RS02245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain STR_RS02245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase STR_RS02250 PF01327 Polypeptide deformylase STR_RS02260 PF00005 ABC transporter STR_RS02260 PF00664 ABC transporter transmembrane region STR_RS02265 PF00005 ABC transporter STR_RS02265 PF00664 ABC transporter transmembrane region STR_RS02275 PF00696 Amino acid kinase family STR_RS02280 PF01765 Ribosome recycling factor STR_RS02290 PF06855 YozE SAM-like fold STR_RS02320 PF02562 PhoH-like protein STR_RS02340 PF01588 Putative tRNA binding domain STR_RS02340 PF09334 tRNA synthetases class I (M) STR_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STR_RS02345 PF03466 LysR substrate binding domain STR_RS02365 PF08439 Oligopeptidase F STR_RS02365 PF01432 Peptidase family M3 STR_RS02370 PF01596 O-methyltransferase STR_RS02375 PF13145 PPIC-type PPIASE domain STR_RS02380 PF01411 tRNA synthetases class II (A) STR_RS02380 PF02272 DHHA1 domain STR_RS02380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain STR_RS02385 PF17961 Bacterial Ig domain STR_RS02385 PF10425 C-terminus of bacterial fibrinogen-binding adhesin STR_RS02385 PF04650 YSIRK type signal peptide STR_RS02385 PF00746 LPXTG cell wall anchor motif STR_RS02400 PF00795 Carbon-nitrogen hydrolase STR_RS02405 PF00155 Aminotransferase class I and II STR_RS02410 PF01118 Semialdehyde dehydrogenase, NAD binding domain STR_RS02410 PF02774 Semialdehyde dehydrogenase, dimerisation domain STR_RS02415 PF01960 ArgJ family STR_RS02420 PF00696 Amino acid kinase family STR_RS02425 PF00202 Aminotransferase class-III STR_RS02430 PF01522 Polysaccharide deacetylase STR_RS02435 PF00742 Homoserine dehydrogenase STR_RS02435 PF03447 Homoserine dehydrogenase, NAD binding domain STR_RS02440 PF08544 GHMP kinases C terminal STR_RS02440 PF00288 GHMP kinases N terminal domain STR_RS02445 PF00892 EamA-like transporter family STR_RS02470 PF08264 Anticodon-binding domain of tRNA STR_RS02470 PF00133 tRNA synthetases class I (I, L, M and V) STR_RS02470 PF10458 Valyl tRNA synthetase tRNA binding arm STR_RS02475 PF00137 ATP synthase subunit C STR_RS02480 PF00119 ATP synthase A chain STR_RS02485 PF00430 ATP synthase B/B' CF(0) STR_RS02490 PF00213 ATP synthase delta (OSCP) subunit STR_RS02495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain STR_RS02495 PF00306 ATP synthase alpha/beta chain, C terminal domain STR_RS02495 PF02874 ATP synthase alpha/beta family, beta-barrel domain STR_RS02500 PF00231 ATP synthase STR_RS02505 PF02874 ATP synthase alpha/beta family, beta-barrel domain STR_RS02505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain STR_RS02510 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain STR_RS02510 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain STR_RS02515 PF01098 Cell cycle protein STR_RS02520 PF03143 Elongation factor Tu C-terminal domain STR_RS02520 PF00009 Elongation factor Tu GTP binding domain STR_RS02520 PF03144 Elongation factor Tu domain 2 STR_RS02525 PF00121 Triosephosphate isomerase STR_RS02530 PF02223 Thymidylate kinase STR_RS02535 PF09115 DNA polymerase III, delta subunit, C terminal STR_RS02540 PF04468 PSP1 C-terminal conserved region STR_RS02545 PF06156 Initiation control protein YabA STR_RS02550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases STR_RS02555 PF00909 Ammonium Transporter Family STR_RS02560 PF00543 Nitrogen regulatory protein P-II STR_RS02565 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase STR_RS02565 PF01476 LysM domain STR_RS02585 PF01979 Amidohydrolase family STR_RS02605 PF02091 Glycyl-tRNA synthetase alpha subunit STR_RS02610 PF02092 Glycyl-tRNA synthetase beta subunit STR_RS02615 PF05979 Bacterial protein of unknown function (DUF896) STR_RS02620 PF00324 Amino acid permease STR_RS02630 PF02378 Phosphotransferase system, EIIC STR_RS02630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS02630 PF00367 phosphotransferase system, EIIB STR_RS02640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD STR_RS02665 PF03466 LysR substrate binding domain STR_RS02665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STR_RS02670 PF01252 Signal peptidase (SPase) II STR_RS02680 PF00156 Phosphoribosyl transferase domain STR_RS02685 PF00860 Permease family STR_RS02690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain STR_RS02690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain STR_RS02695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain STR_RS02695 PF00117 Glutamine amidotransferase class-I STR_RS02700 PF02142 MGS-like domain STR_RS02700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain STR_RS02700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain STR_RS02725 PF02687 FtsX-like permease family STR_RS02725 PF12704 MacB-like periplasmic core domain STR_RS02730 PF12704 MacB-like periplasmic core domain STR_RS02730 PF02687 FtsX-like permease family STR_RS02735 PF00466 Ribosomal protein L10 STR_RS02740 PF00542 Ribosomal protein L7/L12 C-terminal domain STR_RS02740 PF16320 Ribosomal protein L7/L12 dimerisation domain STR_RS02745 PF00664 ABC transporter transmembrane region STR_RS02745 PF00005 ABC transporter STR_RS02750 PF00664 ABC transporter transmembrane region STR_RS02750 PF00005 ABC transporter STR_RS02755 PF02547 Queuosine biosynthesis protein STR_RS02760 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase STR_RS02770 PF04397 LytTr DNA-binding domain STR_RS02770 PF00072 Response regulator receiver domain STR_RS02780 PF00005 ABC transporter STR_RS02790 PF00581 Rhodanese-like domain STR_RS02790 PF17773 UPF0176 acylphosphatase like domain STR_RS02790 PF12368 Rhodanase C-terminal STR_RS02815 PF01479 S4 domain STR_RS02815 PF00849 RNA pseudouridylate synthase STR_RS02820 PF01546 Peptidase family M20/M25/M40 STR_RS02820 PF07687 Peptidase dimerisation domain STR_RS02825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain STR_RS02825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain STR_RS02830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain STR_RS02830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain STR_RS02840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STR_RS02840 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS02850 PF08544 GHMP kinases C terminal STR_RS02850 PF00288 GHMP kinases N terminal domain STR_RS02850 PF10509 Galactokinase galactose-binding signature STR_RS02860 PF00288 GHMP kinases N terminal domain STR_RS02860 PF08544 GHMP kinases C terminal STR_RS02865 PF01070 FMN-dependent dehydrogenase STR_RS02870 PF12804 MobA-like NTP transferase domain STR_RS02870 PF14602 Hexapeptide repeat of succinyl-transferase STR_RS02870 PF00132 Bacterial transferase hexapeptide (six repeats) STR_RS02875 PF00293 NUDIX domain STR_RS02885 PF01048 Phosphorylase superfamily STR_RS02900 PF00534 Glycosyl transferases group 1 STR_RS02900 PF13439 Glycosyltransferase Family 4 STR_RS02905 PF00534 Glycosyl transferases group 1 STR_RS02905 PF13439 Glycosyltransferase Family 4 STR_RS02915 PF03129 Anticodon binding domain STR_RS02915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain STR_RS02915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) STR_RS02915 PF02824 TGS domain STR_RS02935 PF03006 Haemolysin-III related STR_RS02940 PF00368 Hydroxymethylglutaryl-coenzyme A reductase STR_RS02945 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal STR_RS02945 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal STR_RS02950 PF00303 Thymidylate synthase STR_RS02955 PF00186 Dihydrofolate reductase STR_RS02965 PF10431 C-terminal, D2-small domain, of ClpB protein STR_RS02965 PF07724 AAA domain (Cdc48 subfamily) STR_RS02965 PF06689 ClpX C4-type zinc finger STR_RS02970 PF01926 50S ribosome-binding GTPase STR_RS02975 PF00324 Amino acid permease STR_RS02980 PF02574 Homocysteine S-methyltransferase STR_RS02995 PF02660 Glycerol-3-phosphate acyltransferase STR_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS03000 PF01751 Toprim domain STR_RS03000 PF00986 DNA gyrase B subunit, carboxyl terminus STR_RS03000 PF00204 DNA gyrase B STR_RS03005 PF03989 DNA gyrase C-terminal domain, beta-propeller STR_RS03005 PF00521 DNA gyrase/topoisomerase IV, subunit A STR_RS03010 PF01063 Amino-transferase class IV STR_RS03030 PF00575 S1 RNA binding domain STR_RS03065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold STR_RS03065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain STR_RS03085 PF00293 NUDIX domain STR_RS03090 PF00004 ATPase family associated with various cellular activities (AAA) STR_RS03090 PF07724 AAA domain (Cdc48 subfamily) STR_RS03090 PF17871 AAA lid domain STR_RS03090 PF10431 C-terminal, D2-small domain, of ClpB protein STR_RS03095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain STR_RS03095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain STR_RS03100 PF08796 Protein of unknown function (DUF1797) STR_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS03110 PF00005 ABC transporter STR_RS03120 PF02421 Ferrous iron transport protein B STR_RS03120 PF17910 FeoB cytosolic helical domain STR_RS03120 PF07670 Nucleoside recognition STR_RS03120 PF07664 Ferrous iron transport protein B C terminus STR_RS03140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain STR_RS03140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain STR_RS03145 PF01256 Carbohydrate kinase STR_RS03150 PF03717 Penicillin-binding Protein dimerisation domain STR_RS03150 PF00905 Penicillin binding protein transpeptidase domain STR_RS03155 PF13662 Toprim domain STR_RS03155 PF02132 RecR protein STR_RS03165 PF03123 CAT RNA binding domain STR_RS03165 PF00874 PRD domain STR_RS03170 PF02130 Uncharacterized protein family UPF0054 STR_RS03175 PF01219 Prokaryotic diacylglycerol kinase STR_RS03180 PF01926 50S ribosome-binding GTPase STR_RS03180 PF07650 KH domain STR_RS03185 PF06827 Zinc finger found in FPG and IleRS STR_RS03185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain STR_RS03185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain STR_RS03190 PF01121 Dephospho-CoA kinase STR_RS03195 PF00083 Sugar (and other) transporter STR_RS03195 PF07690 Major Facilitator Superfamily STR_RS03205 PF00773 RNB domain STR_RS03205 PF00575 S1 RNA binding domain STR_RS03205 PF17876 Cold shock domain STR_RS03205 PF08206 Ribonuclease B OB domain STR_RS03210 PF01668 SmpB protein STR_RS03215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD STR_RS03220 PF00575 S1 RNA binding domain STR_RS03220 PF03725 3' exoribonuclease family, domain 2 STR_RS03220 PF00013 KH domain STR_RS03220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain STR_RS03220 PF01138 3' exoribonuclease family, domain 1 STR_RS03225 PF01321 Creatinase/Prolidase N-terminal domain STR_RS03225 PF00557 Metallopeptidase family M24 STR_RS03230 PF00356 Bacterial regulatory proteins, lacI family STR_RS03240 PF02595 Glycerate kinase family STR_RS03250 PF03952 Enolase, N-terminal domain STR_RS03250 PF00113 Enolase, C-terminal TIM barrel domain STR_RS03255 PF00884 Sulfatase STR_RS03260 PF10672 S-adenosylmethionine-dependent methyltransferase STR_RS03260 PF17785 PUA-like domain STR_RS03265 PF01487 Type I 3-dehydroquinase STR_RS03270 PF08501 Shikimate dehydrogenase substrate binding domain STR_RS03270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain STR_RS03275 PF01761 3-dehydroquinate synthase STR_RS03280 PF01264 Chorismate synthase STR_RS03285 PF02153 Prephenate dehydrogenase STR_RS03290 PF06133 Control of competence regulator ComK, YlbF/YmcA STR_RS03295 PF00056 lactate/malate dehydrogenase, NAD binding domain STR_RS03295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain STR_RS03300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STR_RS03305 PF01202 Shikimate kinase STR_RS03310 PF00800 Prephenate dehydratase STR_RS03335 PF01938 TRAM domain STR_RS03335 PF05958 tRNA (Uracil-5-)-methyltransferase STR_RS03350 PF02086 D12 class N6 adenine-specific DNA methyltransferase STR_RS03365 PF18070 CRISPR-Cas9 PI domain STR_RS03365 PF18470 Cas9 alpha-helical lobe domain STR_RS03365 PF13395 HNH endonuclease STR_RS03365 PF18541 RuvC endonuclease subdomain 3 STR_RS03365 PF18061 CRISPR-Cas9 WED domain STR_RS03370 PF01867 CRISPR associated protein Cas1 STR_RS03375 PF09827 CRISPR associated protein Cas2 STR_RS03385 PF09323 Domain of unknown function (DUF1980) STR_RS03390 PF03773 Predicted permease STR_RS03395 PF17674 HHH domain STR_RS03395 PF16921 Tex protein YqgF-like domain STR_RS03395 PF09371 Tex-like protein N-terminal domain STR_RS03395 PF00575 S1 RNA binding domain STR_RS03400 PF17283 SprT-like zinc ribbon domain STR_RS03400 PF10263 SprT-like family STR_RS03410 PF07475 HPr Serine kinase C-terminal domain STR_RS03410 PF02603 HPr Serine kinase N terminus STR_RS03415 PF01790 Prolipoprotein diacylglyceryl transferase STR_RS03440 PF16325 Peptidase family U32 C-terminal domain STR_RS03440 PF01136 Peptidase family U32 STR_RS03445 PF02632 BioY family STR_RS03455 PF02229 Transcriptional Coactivator p15 (PC4) STR_RS03460 PF01566 Natural resistance-associated macrophage protein STR_RS03470 PF00293 NUDIX domain STR_RS03510 PF01381 Helix-turn-helix STR_RS03525 PF01336 OB-fold nucleic acid binding domain STR_RS03525 PF00152 tRNA synthetases class II (D, K and N) STR_RS03555 PF00300 Histidine phosphatase superfamily (branch 1) STR_RS03560 PF04073 Aminoacyl-tRNA editing domain STR_RS03590 PF00106 short chain dehydrogenase STR_RS03595 PF18766 SWI2/SNF2 ATPase STR_RS03595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) STR_RS03595 PF12008 Type I restriction and modification enzyme - subunit R C terminal STR_RS03625 PF12161 HsdM N-terminal domain STR_RS03625 PF02384 N-6 DNA Methylase STR_RS03640 PF04011 LemA family STR_RS03645 PF01435 Peptidase family M48 STR_RS03660 PF00311 Phosphoenolpyruvate carboxylase STR_RS03670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain STR_RS03670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain STR_RS03680 PF00210 Ferritin-like domain STR_RS03685 PF01475 Ferric uptake regulator family STR_RS03690 PF06014 Bacterial protein of unknown function (DUF910) STR_RS03695 PF00480 ROK family STR_RS03700 PF00009 Elongation factor Tu GTP binding domain STR_RS03700 PF00679 Elongation factor G C-terminus STR_RS03700 PF03144 Elongation factor Tu domain 2 STR_RS03700 PF14492 Elongation Factor G, domain II STR_RS03710 PF08245 Mur ligase middle domain STR_RS03710 PF02875 Mur ligase family, glutamate ligase domain STR_RS03715 PF04101 Glycosyltransferase family 28 C-terminal domain STR_RS03715 PF03033 Glycosyltransferase family 28 N-terminal domain STR_RS03720 PF08478 POTRA domain, FtsQ-type STR_RS03725 PF02491 SHS2 domain inserted in FTSA STR_RS03725 PF11983 Membrane-attachment and polymerisation-promoting switch STR_RS03730 PF12327 FtsZ family, C-terminal domain STR_RS03730 PF00091 Tubulin/FtsZ family, GTPase domain STR_RS03735 PF01168 Alanine racemase, N-terminal domain STR_RS03740 PF04472 Cell division protein SepF STR_RS03755 PF05103 DivIVA protein STR_RS03760 PF06827 Zinc finger found in FPG and IleRS STR_RS03760 PF00133 tRNA synthetases class I (I, L, M and V) STR_RS03760 PF08264 Anticodon-binding domain of tRNA STR_RS03780 PF01197 Ribosomal protein L31 STR_RS03785 PF02424 ApbE family STR_RS03790 PF01368 DHH family STR_RS03790 PF02272 DHHA1 domain STR_RS03795 PF02798 Glutathione S-transferase, N-terminal domain STR_RS03805 PF00265 Thymidine kinase STR_RS03810 PF00472 RF-1 domain STR_RS03810 PF03462 PCRF domain STR_RS03815 PF05175 Methyltransferase small domain STR_RS03825 PF00464 Serine hydroxymethyltransferase STR_RS03840 PF00664 ABC transporter transmembrane region STR_RS03840 PF00005 ABC transporter STR_RS03845 PF00664 ABC transporter transmembrane region STR_RS03845 PF00005 ABC transporter STR_RS03855 PF13193 AMP-binding enzyme C-terminal domain STR_RS03855 PF00501 AMP-binding enzyme STR_RS03860 PF03062 MBOAT, membrane-bound O-acyltransferase family STR_RS03865 PF00550 Phosphopantetheine attachment site STR_RS03870 PF04914 DltD protein STR_RS03875 PF13333 Integrase core domain STR_RS03875 PF00665 Integrase core domain STR_RS03875 PF13276 HTH-like domain STR_RS03880 PF13333 Integrase core domain STR_RS03880 PF00665 Integrase core domain STR_RS03880 PF13276 HTH-like domain STR_RS03900 PF00689 Cation transporting ATPase, C-terminus STR_RS03900 PF00690 Cation transporter/ATPase, N-terminus STR_RS03905 PF00425 chorismate binding enzyme STR_RS03905 PF04715 Anthranilate synthase component I, N terminal region STR_RS03970 PF00589 Phage integrase family STR_RS03970 PF14659 Phage integrase, N-terminal SAM-like domain STR_RS03980 PF08267 Cobalamin-independent synthase, N-terminal domain STR_RS03980 PF01717 Cobalamin-independent synthase, Catalytic domain STR_RS03985 PF02219 Methylenetetrahydrofolate reductase STR_RS03990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II STR_RS03990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I STR_RS03990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III STR_RS03990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain STR_RS03995 PF12822 ECF transporter, substrate-specific component STR_RS04000 PF02441 Flavoprotein STR_RS04010 PF01268 Formate--tetrahydrofolate ligase STR_RS04025 PF00512 His Kinase A (phospho-acceptor) domain STR_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS04030 PF00512 His Kinase A (phospho-acceptor) domain STR_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS04035 PF13333 Integrase core domain STR_RS04035 PF00665 Integrase core domain STR_RS04045 PF01649 Ribosomal protein S20 STR_RS04050 PF00485 Phosphoribulokinase / Uridine kinase family STR_RS04055 PF05175 Methyltransferase small domain STR_RS04080 PF02608 ABC transporter substrate-binding protein PnrA-like STR_RS04085 PF00005 ABC transporter STR_RS04090 PF02653 Branched-chain amino acid transport system / permease component STR_RS04095 PF02653 Branched-chain amino acid transport system / permease component STR_RS04100 PF00753 Metallo-beta-lactamase superfamily STR_RS04105 PF00929 Exonuclease STR_RS04105 PF04851 Type III restriction enzyme, res subunit STR_RS04105 PF13307 Helicase C-terminal domain STR_RS04115 PF00155 Aminotransferase class I and II STR_RS04120 PF01336 OB-fold nucleic acid binding domain STR_RS04120 PF00152 tRNA synthetases class II (D, K and N) STR_RS04145 PF01042 Endoribonuclease L-PSP STR_RS04150 PF06508 Queuosine biosynthesis protein QueC STR_RS04155 PF01242 6-pyruvoyl tetrahydropterin synthase STR_RS04160 PF04055 Radical SAM superfamily STR_RS04165 PF14489 QueF-like protein STR_RS04180 PF03668 P-loop ATPase protein family STR_RS04185 PF01933 Uncharacterised protein family UPF0052 STR_RS04190 PF02650 WhiA C-terminal HTH domain STR_RS04190 PF10298 WhiA N-terminal LAGLIDADG-like domain STR_RS04190 PF14527 WhiA LAGLIDADG-like domain STR_RS04195 PF03577 Peptidase family C69 STR_RS04200 PF03577 Peptidase family C69 STR_RS04205 PF00313 'Cold-shock' DNA-binding domain STR_RS04210 PF00313 'Cold-shock' DNA-binding domain STR_RS04215 PF00872 Transposase, Mutator family STR_RS04230 PF12008 Type I restriction and modification enzyme - subunit R C terminal STR_RS04230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) STR_RS04230 PF18766 SWI2/SNF2 ATPase STR_RS04235 PF00291 Pyridoxal-phosphate dependent enzyme STR_RS04240 PF01053 Cys/Met metabolism PLP-dependent enzyme STR_RS04250 PF00872 Transposase, Mutator family STR_RS04275 PF06800 Sugar transport protein STR_RS04280 PF06100 MCRA family STR_RS04295 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment STR_RS04295 PF01297 Zinc-uptake complex component A periplasmic STR_RS04310 PF01610 Transposase STR_RS04310 PF13683 Integrase core domain STR_RS04320 PF03601 Conserved hypothetical protein 698 STR_RS04325 PF05257 CHAP domain STR_RS04325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase STR_RS04335 PF03466 LysR substrate binding domain STR_RS04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family STR_RS04340 PF01380 SIS domain STR_RS04345 PF03831 PhnA domain STR_RS04345 PF08274 PhnA Zinc-Ribbon STR_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS04355 PF00005 ABC transporter STR_RS04360 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS04375 PF08240 Alcohol dehydrogenase GroES-like domain STR_RS04375 PF00107 Zinc-binding dehydrogenase STR_RS04380 PF08240 Alcohol dehydrogenase GroES-like domain STR_RS04380 PF00107 Zinc-binding dehydrogenase STR_RS04385 PF00107 Zinc-binding dehydrogenase STR_RS04385 PF08240 Alcohol dehydrogenase GroES-like domain STR_RS04395 PF04851 Type III restriction enzyme, res subunit STR_RS04400 PF01555 DNA methylase STR_RS04405 PF00117 Glutamine amidotransferase class-I STR_RS04405 PF02540 NAD synthase STR_RS04405 PF00958 GMP synthase C terminal domain STR_RS04410 PF07702 UTRA domain STR_RS04410 PF00392 Bacterial regulatory proteins, gntR family STR_RS04415 PF04297 Putative helix-turn-helix protein, YlxM / p13 like STR_RS04420 PF02978 Signal peptide binding domain STR_RS04420 PF00448 SRP54-type protein, GTPase domain STR_RS04420 PF02881 SRP54-type protein, helical bundle domain STR_RS04430 PF02829 3H domain STR_RS04430 PF08279 HTH domain STR_RS04440 PF01926 50S ribosome-binding GTPase STR_RS04445 PF01351 Ribonuclease HII STR_RS04450 PF00480 ROK family STR_RS04455 PF18255 DNA processing protein A sterile alpha motif domain STR_RS04455 PF02481 DNA recombination-mediator protein A STR_RS04460 PF01131 DNA topoisomerase STR_RS04460 PF01396 Topoisomerase DNA binding C4 zinc finger STR_RS04460 PF01751 Toprim domain STR_RS04470 PF00486 Transcriptional regulatory protein, C terminal STR_RS04470 PF00072 Response regulator receiver domain STR_RS04475 PF00512 His Kinase A (phospho-acceptor) domain STR_RS04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS04480 PF01134 Glucose inhibited division protein A STR_RS04490 PF00334 Nucleoside diphosphate kinase STR_RS04495 PF00581 Rhodanese-like domain STR_RS04500 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS04510 PF03144 Elongation factor Tu domain 2 STR_RS04510 PF00009 Elongation factor Tu GTP binding domain STR_RS04510 PF06421 GTP-binding protein LepA C-terminus STR_RS04510 PF00679 Elongation factor G C-terminus STR_RS04525 PF01381 Helix-turn-helix STR_RS04530 PF01381 Helix-turn-helix STR_RS04540 PF06463 Molybdenum Cofactor Synthesis C STR_RS04540 PF04055 Radical SAM superfamily STR_RS04545 PF00491 Arginase family STR_RS04555 PF00205 Thiamine pyrophosphate enzyme, central domain STR_RS04555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain STR_RS04555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STR_RS04560 PF03306 Alpha-acetolactate decarboxylase STR_RS04600 PF01545 Cation efflux family STR_RS04605 PF00762 Ferrochelatase STR_RS04645 PF01497 Periplasmic binding protein STR_RS04660 PF01554 MatE STR_RS04670 PF05670 NFACT protein RNA binding domain STR_RS04685 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B STR_RS04690 PF01180 Dihydroorotate dehydrogenase STR_RS04705 PF09827 CRISPR associated protein Cas2 STR_RS04710 PF03787 RAMP superfamily STR_RS04715 PF17953 CRISPR Csm4 C-terminal domain STR_RS04720 PF03787 RAMP superfamily STR_RS04725 PF09659 CRISPR-associated protein (Cas_Csm6) STR_RS04730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family STR_RS04735 PF00156 Phosphoribosyl transferase domain STR_RS04740 PF01425 Amidase STR_RS04745 PF00854 POT family STR_RS04760 PF01425 Amidase STR_RS04780 PF00149 Calcineurin-like phosphoesterase STR_RS04780 PF02872 5'-nucleotidase, C-terminal domain STR_RS04795 PF01926 50S ribosome-binding GTPase STR_RS04795 PF12631 MnmE helical domain STR_RS04795 PF10396 GTP-binding protein TrmE N-terminus STR_RS04800 PF01235 Sodium:alanine symporter family STR_RS04805 PF00580 UvrD/REP helicase N-terminal domain STR_RS04805 PF13361 UvrD-like helicase C-terminal domain STR_RS04810 PF01053 Cys/Met metabolism PLP-dependent enzyme STR_RS04825 PF08534 Redoxin STR_RS04840 PF01509 TruB family pseudouridylate synthase (N terminal domain) STR_RS04840 PF16198 tRNA pseudouridylate synthase B C-terminal domain STR_RS04845 PF06574 FAD synthetase STR_RS04845 PF01687 Riboflavin kinase STR_RS04850 PF03960 ArsC family STR_RS04855 PF05256 Uncharacterised protein family (UPF0223) STR_RS04860 PF00459 Inositol monophosphatase family STR_RS04865 PF01189 16S rRNA methyltransferase RsmB/F STR_RS04865 PF17126 RsmF rRNA methyltransferase first C-terminal domain STR_RS04865 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF STR_RS04870 PF12849 PBP superfamily domain STR_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS04885 PF00005 ABC transporter STR_RS04890 PF00005 ABC transporter STR_RS04895 PF01895 PhoU domain STR_RS04900 PF11838 ERAP1-like C-terminal domain STR_RS04900 PF01433 Peptidase family M1 domain STR_RS04905 PF13495 Phage integrase, N-terminal SAM-like domain STR_RS04905 PF00589 Phage integrase family STR_RS04910 PF10437 Bacterial lipoate protein ligase C-terminus STR_RS04910 PF03099 Biotin/lipoate A/B protein ligase family STR_RS04925 PF00343 Carbohydrate phosphorylase STR_RS04930 PF02446 4-alpha-glucanotransferase STR_RS04935 PF00356 Bacterial regulatory proteins, lacI family STR_RS04955 PF02416 mttA/Hcf106 family STR_RS04960 PF00902 Sec-independent protein translocase protein (TatC) STR_RS04965 PF03239 Iron permease FTR1 family STR_RS04970 PF10518 TAT (twin-arginine translocation) pathway signal sequence STR_RS04970 PF04261 Dyp-type peroxidase family STR_RS04975 PF09375 Imelysin STR_RS04980 PF01497 Periplasmic binding protein STR_RS04985 PF00005 ABC transporter STR_RS04990 PF01032 FecCD transport family STR_RS04995 PF01032 FecCD transport family STR_RS05045 PF00579 tRNA synthetases class I (W and Y) STR_RS05070 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS05070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STR_RS05075 PF00364 Biotin-requiring enzyme STR_RS05075 PF02817 e3 binding domain STR_RS05075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) STR_RS05080 PF02779 Transketolase, pyrimidine binding domain STR_RS05080 PF00364 Biotin-requiring enzyme STR_RS05080 PF02780 Transketolase, C-terminal domain STR_RS05085 PF00676 Dehydrogenase E1 component STR_RS05105 PF01979 Amidohydrolase family STR_RS05110 PF03167 Uracil DNA glycosylase superfamily STR_RS05115 PF01545 Cation efflux family STR_RS05115 PF16916 Dimerisation domain of Zinc Transporter STR_RS05125 PF01734 Patatin-like phospholipase STR_RS05135 PF03109 ABC1 family STR_RS05145 PF00232 Glycosyl hydrolase family 1 STR_RS05150 PF00232 Glycosyl hydrolase family 1 STR_RS05155 PF00232 Glycosyl hydrolase family 1 STR_RS05160 PF00232 Glycosyl hydrolase family 1 STR_RS05165 PF01594 AI-2E family transporter STR_RS05180 PF00872 Transposase, Mutator family STR_RS05185 PF13439 Glycosyltransferase Family 4 STR_RS05185 PF00534 Glycosyl transferases group 1 STR_RS05205 PF04230 Polysaccharide pyruvyl transferase STR_RS05220 PF01501 Glycosyl transferase family 8 STR_RS05220 PF00535 Glycosyl transferase family 2 STR_RS05225 PF12804 MobA-like NTP transferase domain STR_RS05225 PF14602 Hexapeptide repeat of succinyl-transferase STR_RS05225 PF00132 Bacterial transferase hexapeptide (six repeats) STR_RS05230 PF13439 Glycosyltransferase Family 4 STR_RS05230 PF00534 Glycosyl transferases group 1 STR_RS05245 PF02397 Bacterial sugar transferase STR_RS05250 PF13614 AAA domain STR_RS05255 PF02706 Chain length determinant protein STR_RS05265 PF03816 Cell envelope-related transcriptional attenuator domain STR_RS05270 PF01048 Phosphorylase superfamily STR_RS05275 PF00117 Glutamine amidotransferase class-I STR_RS05285 PF01048 Phosphorylase superfamily STR_RS05295 PF01676 Metalloenzyme superfamily STR_RS05300 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) STR_RS05310 PF03167 Uracil DNA glycosylase superfamily STR_RS05315 PF01546 Peptidase family M20/M25/M40 STR_RS05320 PF01361 Tautomerase enzyme STR_RS05330 PF01797 Transposase IS200 like STR_RS05335 PF01797 Transposase IS200 like STR_RS05340 PF00453 Ribosomal protein L20 STR_RS05345 PF01632 Ribosomal protein L35 STR_RS05350 PF00707 Translation initiation factor IF-3, C-terminal domain STR_RS05350 PF05198 Translation initiation factor IF-3, N-terminal domain STR_RS05355 PF02224 Cytidylate kinase STR_RS05370 PF07687 Peptidase dimerisation domain STR_RS05370 PF01546 Peptidase family M20/M25/M40 STR_RS05375 PF10502 Signal peptidase, peptidase S26 STR_RS05385 PF01594 AI-2E family transporter STR_RS05390 PF00293 NUDIX domain STR_RS05395 PF02687 FtsX-like permease family STR_RS05395 PF18075 FtsX extracellular domain STR_RS05400 PF00005 ABC transporter STR_RS05405 PF03462 PCRF domain STR_RS05405 PF00472 RF-1 domain STR_RS05410 PF08331 Domain of unknown function (DUF1730) STR_RS05420 PF00881 Nitroreductase family STR_RS05425 PF00689 Cation transporting ATPase, C-terminus STR_RS05425 PF00690 Cation transporter/ATPase, N-terminus STR_RS05445 PF02388 FemAB family STR_RS05455 PF00753 Metallo-beta-lactamase superfamily STR_RS05460 PF00512 His Kinase A (phospho-acceptor) domain STR_RS05460 PF13426 PAS domain STR_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS05460 PF00672 HAMP domain STR_RS05465 PF00486 Transcriptional regulatory protein, C terminal STR_RS05465 PF00072 Response regulator receiver domain STR_RS05470 PF00005 ABC transporter STR_RS05475 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS05485 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS05490 PF01223 DNA/RNA non-specific endonuclease STR_RS05500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STR_RS05510 PF16363 GDP-mannose 4,6 dehydratase STR_RS05520 PF02773 S-adenosylmethionine synthetase, C-terminal domain STR_RS05520 PF02772 S-adenosylmethionine synthetase, central domain STR_RS05520 PF00438 S-adenosylmethionine synthetase, N-terminal domain STR_RS05525 PF08279 HTH domain STR_RS05525 PF02237 Biotin protein ligase C terminal domain STR_RS05525 PF03099 Biotin/lipoate A/B protein ligase family STR_RS05535 PF12169 DNA polymerase III subunits gamma and tau domain III STR_RS05540 PF13185 GAF domain STR_RS05560 PF01245 Ribosomal protein L19 STR_RS05565 PF00654 Voltage gated chloride channel STR_RS05570 PF00800 Prephenate dehydratase STR_RS05570 PF01817 Chorismate mutase type II STR_RS05570 PF01842 ACT domain STR_RS05575 PF00654 Voltage gated chloride channel STR_RS05580 PF00258 Flavodoxin STR_RS05595 PF00756 Putative esterase STR_RS05600 PF00753 Metallo-beta-lactamase superfamily STR_RS05600 PF17770 Ribonuclease J C-terminal domain STR_RS05600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain STR_RS05605 PF08402 TOBE domain STR_RS05605 PF00005 ABC transporter STR_RS05625 PF04650 YSIRK type signal peptide STR_RS05625 PF06458 MucBP domain STR_RS05625 PF00746 LPXTG cell wall anchor motif STR_RS05650 PF00224 Pyruvate kinase, barrel domain STR_RS05650 PF02887 Pyruvate kinase, alpha/beta domain STR_RS05655 PF00365 Phosphofructokinase STR_RS05660 PF07733 Bacterial DNA polymerase III alpha NTPase domain STR_RS05660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STR_RS05660 PF14579 Helix-hairpin-helix motif STR_RS05660 PF02811 PHP domain STR_RS05660 PF01336 OB-fold nucleic acid binding domain STR_RS05670 PF00694 Aconitase C-terminal domain STR_RS05675 PF00330 Aconitase family (aconitate hydratase) STR_RS05685 PF00180 Isocitrate/isopropylmalate dehydrogenase STR_RS05690 PF08502 LeuA allosteric (dimerisation) domain STR_RS05690 PF00682 HMGL-like STR_RS05695 PF00300 Histidine phosphatase superfamily (branch 1) STR_RS05710 PF01180 Dihydroorotate dehydrogenase STR_RS05720 PF00216 Bacterial DNA-binding protein STR_RS05730 PF13472 GDSL-like Lipase/Acylhydrolase family STR_RS05735 PF02645 Uncharacterised protein, DegV family COG1307 STR_RS05740 PF13476 AAA domain STR_RS05745 PF02863 Arginine repressor, C-terminal domain STR_RS05745 PF01316 Arginine repressor, DNA binding domain STR_RS05750 PF01728 FtsJ-like methyltransferase STR_RS05750 PF01479 S4 domain STR_RS05755 PF00348 Polyprenyl synthetase STR_RS05760 PF02609 Exonuclease VII small subunit STR_RS05765 PF13742 OB-fold nucleic acid binding domain STR_RS05765 PF02601 Exonuclease VII, large subunit STR_RS05775 PF10576 Iron-sulfur binding domain of endonuclease III STR_RS05775 PF00633 Helix-hairpin-helix motif STR_RS05775 PF00730 HhH-GPD superfamily base excision DNA repair protein STR_RS05785 PF04204 Homoserine O-succinyltransferase STR_RS05790 PF00156 Phosphoribosyl transferase domain STR_RS05795 PF10141 Single-strand DNA-specific exonuclease, C terminal domain STR_RS05795 PF17768 RecJ OB domain STR_RS05795 PF02272 DHHA1 domain STR_RS05795 PF01368 DHH family STR_RS05800 PF00106 short chain dehydrogenase STR_RS05805 PF00753 Metallo-beta-lactamase superfamily STR_RS05815 PF01926 50S ribosome-binding GTPase STR_RS05815 PF13167 GTP-binding GTPase N-terminal STR_RS05815 PF16360 GTP-binding GTPase Middle Region STR_RS05820 PF01098 Cell cycle protein STR_RS05845 PF13344 Haloacid dehalogenase-like hydrolase STR_RS05855 PF04055 Radical SAM superfamily STR_RS05855 PF06969 HemN C-terminal domain STR_RS05875 PF16363 GDP-mannose 4,6 dehydratase STR_RS05880 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase STR_RS05885 PF00483 Nucleotidyl transferase STR_RS05890 PF01266 FAD dependent oxidoreductase STR_RS05895 PF02535 ZIP Zinc transporter STR_RS05900 PF01784 NIF3 (NGG1p interacting factor 3) STR_RS05905 PF04816 tRNA (adenine(22)-N(1))-methyltransferase STR_RS05915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I STR_RS05915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II STR_RS05915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III STR_RS05915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain STR_RS05925 PF02457 DisA bacterial checkpoint controller nucleotide-binding STR_RS05930 PF08245 Mur ligase middle domain STR_RS05930 PF08353 Domain of unknown function (DUF1727) STR_RS05935 PF07685 CobB/CobQ-like glutamine amidotransferase domain STR_RS05940 PF03706 Lysylphosphatidylglycerol synthase TM region STR_RS05940 PF09924 Uncharacterised conserved protein (DUF2156) STR_RS05945 PF00561 alpha/beta hydrolase fold STR_RS05955 PF12848 ABC transporter STR_RS05955 PF00005 ABC transporter STR_RS05955 PF16326 ABC transporter C-terminal domain STR_RS05960 PF00485 Phosphoribulokinase / Uridine kinase family STR_RS05965 PF00270 DEAD/DEAH box helicase STR_RS05965 PF00271 Helicase conserved C-terminal domain STR_RS05970 PF00171 Aldehyde dehydrogenase family STR_RS05975 PF05524 PEP-utilising enzyme, N-terminal STR_RS05975 PF02896 PEP-utilising enzyme, TIM barrel domain STR_RS05975 PF00391 PEP-utilising enzyme, mobile domain STR_RS05980 PF00381 PTS HPr component phosphorylation site STR_RS05985 PF00180 Isocitrate/isopropylmalate dehydrogenase STR_RS05990 PF00285 Citrate synthase, C-terminal domain STR_RS05995 PF00694 Aconitase C-terminal domain STR_RS05995 PF00330 Aconitase family (aconitate hydratase) STR_RS06000 PF00462 Glutaredoxin STR_RS06005 PF02867 Ribonucleotide reductase, barrel domain STR_RS06005 PF00317 Ribonucleotide reductase, all-alpha domain STR_RS06005 PF08343 Ribonucleotide reductase N-terminal STR_RS06010 PF00268 Ribonucleotide reductase, small chain STR_RS06045 PF00521 DNA gyrase/topoisomerase IV, subunit A STR_RS06045 PF03989 DNA gyrase C-terminal domain, beta-propeller STR_RS06050 PF00056 lactate/malate dehydrogenase, NAD binding domain STR_RS06050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain STR_RS06055 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS06055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain STR_RS06060 PF12848 ABC transporter STR_RS06060 PF00005 ABC transporter STR_RS06085 PF00155 Aminotransferase class I and II STR_RS06085 PF00392 Bacterial regulatory proteins, gntR family STR_RS06090 PF03477 ATP cone domain STR_RS06090 PF13597 Anaerobic ribonucleoside-triphosphate reductase STR_RS06105 PF03483 B3/4 domain STR_RS06105 PF03484 tRNA synthetase B5 domain STR_RS06105 PF03147 Ferredoxin-fold anticodon binding domain STR_RS06105 PF01588 Putative tRNA binding domain STR_RS06105 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain STR_RS06110 PF00583 Acetyltransferase (GNAT) family STR_RS06115 PF01409 tRNA synthetases class II core domain (F) STR_RS06115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain STR_RS06125 PF02463 RecF/RecN/SMC N terminal domain STR_RS06125 PF06470 SMC proteins Flexible Hinge Domain STR_RS06130 PF14622 Ribonuclease-III-like STR_RS06130 PF00035 Double-stranded RNA binding motif STR_RS06135 PF00701 Dihydrodipicolinate synthetase family STR_RS06140 PF02774 Semialdehyde dehydrogenase, dimerisation domain STR_RS06140 PF01118 Semialdehyde dehydrogenase, NAD binding domain STR_RS06165 PF13091 PLD-like domain STR_RS06170 PF01541 GIY-YIG catalytic domain STR_RS06170 PF02151 UvrB/uvrC motif STR_RS06170 PF08459 UvrC Helix-hairpin-helix N-terminal STR_RS06175 PF13419 Haloacid dehalogenase-like hydrolase STR_RS06180 PF02632 BioY family STR_RS06185 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS06190 PF00005 ABC transporter STR_RS06190 PF00571 CBS domain STR_RS06195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system STR_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS06205 PF00221 Aromatic amino acid lyase STR_RS06215 PF01175 Urocanase Rossmann-like domain STR_RS06215 PF17391 Urocanase N-terminal domain STR_RS06215 PF17392 Urocanase C-terminal domain STR_RS06220 PF03315 Serine dehydratase beta chain STR_RS06220 PF01842 ACT domain STR_RS06225 PF03313 Serine dehydratase alpha chain STR_RS06250 PF00005 ABC transporter STR_RS06250 PF09383 NIL domain STR_RS06255 PF00005 ABC transporter STR_RS06255 PF13732 Domain of unknown function (DUF4162) STR_RS06260 PF00072 Response regulator receiver domain STR_RS06260 PF00196 Bacterial regulatory proteins, luxR family STR_RS06265 PF07730 Histidine kinase STR_RS06275 PF00005 ABC transporter STR_RS06290 PF01758 Sodium Bile acid symporter family STR_RS06305 PF02687 FtsX-like permease family STR_RS06310 PF00005 ABC transporter STR_RS06315 PF18415 Histidine kinase receptor ArcB trans-membrane domain STR_RS06315 PF00072 Response regulator receiver domain STR_RS06315 PF00989 PAS fold STR_RS06315 PF01627 Hpt domain STR_RS06315 PF00512 His Kinase A (phospho-acceptor) domain STR_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS06320 PF00486 Transcriptional regulatory protein, C terminal STR_RS06320 PF00072 Response regulator receiver domain STR_RS06330 PF00860 Permease family STR_RS06340 PF01554 MatE STR_RS06345 PF01641 SelR domain STR_RS06345 PF01625 Peptide methionine sulfoxide reductase STR_RS06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS06355 PF10397 Adenylosuccinate lyase C-terminus STR_RS06355 PF00206 Lyase STR_RS06360 PF00005 ABC transporter STR_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS06375 PF03972 MmgE/PrpD family STR_RS06390 PF00465 Iron-containing alcohol dehydrogenase STR_RS06400 PF07687 Peptidase dimerisation domain STR_RS06400 PF01546 Peptidase family M20/M25/M40 STR_RS06405 PF05525 Branched-chain amino acid transport protein STR_RS06410 PF01238 Phosphomannose isomerase type I STR_RS06415 PF01238 Phosphomannose isomerase type I STR_RS06420 PF05532 CsbD-like STR_RS06425 PF13520 Amino acid permease STR_RS06440 PF02082 Transcriptional regulator STR_RS06450 PF02378 Phosphotransferase system, EIIC STR_RS06450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit STR_RS06455 PF00881 Nitroreductase family STR_RS06465 PF00248 Aldo/keto reductase family STR_RS06480 PF07669 Eco57I restriction-modification methylase STR_RS06485 PF07669 Eco57I restriction-modification methylase STR_RS06485 PF12950 TaqI-like C-terminal specificity domain STR_RS06490 PF08903 Domain of unknown function (DUF1846) STR_RS06520 PF11798 IMS family HHH motif STR_RS06520 PF00817 impB/mucB/samB family STR_RS06520 PF11799 impB/mucB/samB family C-terminal domain STR_RS06540 PF01810 LysE type translocator STR_RS06550 PF01501 Glycosyl transferase family 8 STR_RS06550 PF00535 Glycosyl transferase family 2 STR_RS06565 PF13476 AAA domain STR_RS06570 PF00149 Calcineurin-like phosphoesterase STR_RS06570 PF12320 Type 5 capsule protein repressor C-terminal domain STR_RS06575 PF02929 Beta galactosidase small chain STR_RS06575 PF16353 Domain of unknown function(DUF4981) STR_RS06575 PF02836 Glycosyl hydrolases family 2, TIM barrel domain STR_RS06575 PF02837 Glycosyl hydrolases family 2, sugar binding domain STR_RS06575 PF00703 Glycosyl hydrolases family 2 STR_RS06580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS06585 PF01263 Aldose 1-epimerase STR_RS06590 PF01370 NAD dependent epimerase/dehydratase family STR_RS06595 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain STR_RS06595 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain STR_RS06600 PF00288 GHMP kinases N terminal domain STR_RS06600 PF10509 Galactokinase galactose-binding signature STR_RS06600 PF08544 GHMP kinases C terminal STR_RS06605 PF00356 Bacterial regulatory proteins, lacI family STR_RS06625 PF00005 ABC transporter STR_RS06625 PF12848 ABC transporter STR_RS06640 PF18419 ATP-grasp-like domain STR_RS06640 PF02655 ATP-grasp domain STR_RS06640 PF04262 Glutamate-cysteine ligase STR_RS06650 PF09397 Ftsk gamma domain STR_RS06650 PF01580 FtsK/SpoIIIE family STR_RS06650 PF17854 FtsK alpha domain STR_RS06655 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS06660 PF01746 tRNA (Guanine-1)-methyltransferase STR_RS06665 PF05239 PRC-barrel domain STR_RS06665 PF01782 RimM N-terminal domain STR_RS06680 PF00196 Bacterial regulatory proteins, luxR family STR_RS06680 PF00072 Response regulator receiver domain STR_RS06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS06685 PF07730 Histidine kinase STR_RS06695 PF00069 Protein kinase domain STR_RS06695 PF03793 PASTA domain STR_RS06705 PF01189 16S rRNA methyltransferase RsmB/F STR_RS06705 PF01029 NusB family STR_RS06710 PF02911 Formyl transferase, C-terminal domain STR_RS06710 PF00551 Formyl transferase STR_RS06715 PF18319 PriA DNA helicase Cys-rich region (CRR) domain STR_RS06715 PF04851 Type III restriction enzyme, res subunit STR_RS06715 PF18074 Primosomal protein N C-terminal domain STR_RS06715 PF00271 Helicase conserved C-terminal domain STR_RS06715 PF17764 3′ DNA-binding domain (3′BD) STR_RS06720 PF01192 RNA polymerase Rpb6 STR_RS06725 PF00625 Guanylate kinase STR_RS06730 PF02881 SRP54-type protein, helical bundle domain STR_RS06730 PF00448 SRP54-type protein, GTPase domain STR_RS06745 PF00392 Bacterial regulatory proteins, gntR family STR_RS06750 PF00005 ABC transporter STR_RS06760 PF00005 ABC transporter STR_RS06760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS06765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS06765 PF00005 ABC transporter STR_RS06770 PF12911 N-terminal TM domain of oligopeptide transport permease C STR_RS06770 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS06790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STR_RS06795 PF00005 ABC transporter STR_RS06795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS06800 PF00005 ABC transporter STR_RS06800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region STR_RS06805 PF01026 TatD related DNase STR_RS06810 PF07690 Major Facilitator Superfamily STR_RS06815 PF13333 Integrase core domain STR_RS06815 PF00665 Integrase core domain STR_RS06815 PF13276 HTH-like domain STR_RS06825 PF01515 Phosphate acetyl/butaryl transferase STR_RS06830 PF00849 RNA pseudouridylate synthase STR_RS06835 PF01513 ATP-NAD kinase STR_RS06840 PF04607 Region found in RelA / SpoT proteins STR_RS06850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase STR_RS06850 PF14572 Phosphoribosyl synthetase-associated domain STR_RS06855 PF00266 Aminotransferase class-V STR_RS06865 PF06971 Putative DNA-binding protein N-terminus STR_RS06865 PF02629 CoA binding domain STR_RS06870 PF07722 Peptidase C26 STR_RS06875 PF04002 RadC-like JAB domain STR_RS06885 PF05045 Rhamnan synthesis protein F STR_RS06885 PF14307 Glycosyltransferase WbsX STR_RS06895 PF00005 ABC transporter STR_RS06895 PF14524 Wzt C-terminal domain STR_RS06905 PF00535 Glycosyl transferase family 2 STR_RS06935 PF00535 Glycosyl transferase family 2 STR_RS06945 PF04321 RmlD substrate binding domain STR_RS06950 PF00535 Glycosyl transferase family 2 STR_RS06955 PF01883 Iron-sulfur cluster assembly protein STR_RS06960 PF00140 Sigma-70 factor, region 1.2 STR_RS06960 PF04545 Sigma-70, region 4 STR_RS06960 PF04542 Sigma-70 region 2 STR_RS06960 PF03979 Sigma-70 factor, region 1.1 STR_RS06960 PF04539 Sigma-70 region 3 STR_RS06965 PF08275 DNA primase catalytic core, N-terminal domain STR_RS06965 PF10410 DnaB-helicase binding domain of primase STR_RS06965 PF01807 CHC2 zinc finger STR_RS06970 PF01165 Ribosomal protein S21 STR_RS06980 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS06985 PF00155 Aminotransferase class I and II STR_RS06990 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS06995 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS07000 PF00293 NUDIX domain STR_RS07005 PF12344 Ultra-violet resistance protein B STR_RS07005 PF02151 UvrB/uvrC motif STR_RS07005 PF04851 Type III restriction enzyme, res subunit STR_RS07005 PF17757 UvrB interaction domain STR_RS07005 PF00271 Helicase conserved C-terminal domain STR_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07030 PF00005 ABC transporter STR_RS07040 PF01926 50S ribosome-binding GTPase STR_RS07040 PF01018 GTP1/OBG STR_RS07040 PF09269 Domain of unknown function (DUF1967) STR_RS07045 PF01479 S4 domain STR_RS07045 PF00849 RNA pseudouridylate synthase STR_RS07080 PF00005 ABC transporter STR_RS07115 PF06160 Septation ring formation regulator, EzrA STR_RS07120 PF00204 DNA gyrase B STR_RS07120 PF00986 DNA gyrase B subunit, carboxyl terminus STR_RS07120 PF01751 Toprim domain STR_RS07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STR_RS07130 PF04172 LrgB-like family STR_RS07135 PF03788 LrgA family STR_RS07145 PF03960 ArsC family STR_RS07155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain STR_RS07155 PF01842 ACT domain STR_RS07155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain STR_RS07165 PF00266 Aminotransferase class-V STR_RS07175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily STR_RS07185 PF13416 Bacterial extracellular solute-binding protein STR_RS07190 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07195 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07200 PF00005 ABC transporter STR_RS07200 PF08402 TOBE domain STR_RS07205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain STR_RS07205 PF01565 FAD binding domain STR_RS07210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) STR_RS07215 PF02152 Dihydroneopterin aldolase STR_RS07220 PF00128 Alpha amylase, catalytic domain STR_RS07220 PF09154 Domain of unknown function (DUF1939) STR_RS07225 PF00809 Pterin binding enzyme STR_RS07230 PF01227 GTP cyclohydrolase I STR_RS07235 PF13520 Amino acid permease STR_RS07240 PF02875 Mur ligase family, glutamate ligase domain STR_RS07240 PF08245 Mur ligase middle domain STR_RS07250 PF00886 Ribosomal protein S16 STR_RS07255 PF03848 Tellurite resistance protein TehB STR_RS07255 PF09313 Domain of unknown function (DUF1971) STR_RS07265 PF03372 Endonuclease/Exonuclease/phosphatase family STR_RS07280 PF00781 Diacylglycerol kinase catalytic domain STR_RS07285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain STR_RS07285 PF12826 Helix-hairpin-helix motif STR_RS07285 PF01653 NAD-dependent DNA ligase adenylation domain STR_RS07285 PF03120 NAD-dependent DNA ligase OB-fold domain STR_RS07285 PF00533 BRCA1 C Terminus (BRCT) domain STR_RS07290 PF06177 QueT transporter STR_RS07300 PF00557 Metallopeptidase family M24 STR_RS07305 PF00392 Bacterial regulatory proteins, gntR family STR_RS07305 PF07085 DRTGG domain STR_RS07305 PF00571 CBS domain STR_RS07305 PF03061 Thioesterase superfamily STR_RS07315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) STR_RS07320 PF03772 Competence protein STR_RS07320 PF13567 Domain of unknown function (DUF4131) STR_RS07320 PF00753 Metallo-beta-lactamase superfamily STR_RS07325 PF10531 SLBB domain STR_RS07330 PF01553 Acyltransferase STR_RS07335 PF01522 Polysaccharide deacetylase STR_RS07340 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain STR_RS07340 PF01522 Polysaccharide deacetylase STR_RS07345 PF05175 Methyltransferase small domain STR_RS07350 PF01541 GIY-YIG catalytic domain STR_RS07355 PF00270 DEAD/DEAH box helicase STR_RS07355 PF00271 Helicase conserved C-terminal domain STR_RS07365 PF08000 Bacterial PH domain STR_RS07370 PF09515 Thiamine transporter protein (Thia_YuaJ) STR_RS07375 PF01381 Helix-turn-helix STR_RS07380 PF07690 Major Facilitator Superfamily STR_RS07385 PF16658 Class II release factor RF3, C-terminal domain STR_RS07385 PF03144 Elongation factor Tu domain 2 STR_RS07385 PF00009 Elongation factor Tu GTP binding domain STR_RS07395 PF01225 Mur ligase family, catalytic domain STR_RS07395 PF02875 Mur ligase family, glutamate ligase domain STR_RS07395 PF08245 Mur ligase middle domain STR_RS07410 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS07415 PF00005 ABC transporter STR_RS07420 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07425 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07430 PF01820 D-ala D-ala ligase N-terminus STR_RS07430 PF07478 D-ala D-ala ligase C-terminus STR_RS07440 PF00403 Heavy-metal-associated domain STR_RS07445 PF03965 Penicillinase repressor STR_RS07450 PF00290 Tryptophan synthase alpha chain STR_RS07455 PF00291 Pyridoxal-phosphate dependent enzyme STR_RS07460 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase STR_RS07465 PF00218 Indole-3-glycerol phosphate synthase STR_RS07470 PF02885 Glycosyl transferase family, helical bundle domain STR_RS07470 PF00591 Glycosyl transferase family, a/b domain STR_RS07475 PF00117 Glutamine amidotransferase class-I STR_RS07480 PF00425 chorismate binding enzyme STR_RS07480 PF04715 Anthranilate synthase component I, N terminal region STR_RS07485 PF02153 Prephenate dehydrogenase STR_RS07485 PF01817 Chorismate mutase type II STR_RS07505 PF02575 YbaB/EbfC DNA-binding family STR_RS07520 PF02811 PHP domain STR_RS07520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain STR_RS07520 PF00929 Exonuclease STR_RS07520 PF07733 Bacterial DNA polymerase III alpha NTPase domain STR_RS07520 PF14579 Helix-hairpin-helix motif STR_RS07525 PF04394 Protein of unknown function, DUF536 STR_RS07525 PF08279 HTH domain STR_RS07530 PF01883 Iron-sulfur cluster assembly protein STR_RS07535 PF00920 Dehydratase family STR_RS07550 PF02390 Putative methyltransferase STR_RS07565 PF00005 ABC transporter STR_RS07570 PF01230 HIT domain STR_RS07590 PF07724 AAA domain (Cdc48 subfamily) STR_RS07590 PF00004 ATPase family associated with various cellular activities (AAA) STR_RS07590 PF10431 C-terminal, D2-small domain, of ClpB protein STR_RS07590 PF17871 AAA lid domain STR_RS07595 PF05636 HIGH Nucleotidyl Transferase STR_RS07600 PF13649 Methyltransferase domain STR_RS07610 PF01966 HD domain STR_RS07615 PF01467 Cytidylyltransferase-like STR_RS07620 PF01985 CRS1 / YhbY (CRM) domain STR_RS07625 PF01926 50S ribosome-binding GTPase STR_RS07635 PF00892 EamA-like transporter family STR_RS07645 PF02934 GatB/GatE catalytic domain STR_RS07645 PF02637 GatB domain STR_RS07650 PF01425 Amidase STR_RS07655 PF02686 Glu-tRNAGln amidotransferase C subunit STR_RS07670 PF01625 Peptide methionine sulfoxide reductase STR_RS07675 PF03180 NLPA lipoprotein STR_RS07680 PF00857 Isochorismatase family STR_RS07685 PF06018 CodY GAF-like domain STR_RS07685 PF08222 CodY helix-turn-helix domain STR_RS07690 PF00155 Aminotransferase class I and II STR_RS07695 PF00582 Universal stress protein family STR_RS07710 PF04055 Radical SAM superfamily STR_RS07715 PF03471 Transporter associated domain STR_RS07715 PF00571 CBS domain STR_RS07715 PF01595 Cyclin M transmembrane N-terminal domain STR_RS07720 PF00005 ABC transporter STR_RS07725 PF00999 Sodium/hydrogen exchanger family STR_RS07735 PF06962 Putative rRNA methylase STR_RS07740 PF16199 Radical_SAM C-terminal domain STR_RS07740 PF04055 Radical SAM superfamily STR_RS07745 PF13180 PDZ domain STR_RS07745 PF05362 Lon protease (S16) C-terminal proteolytic domain STR_RS07750 PF01467 Cytidylyltransferase-like STR_RS07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase STR_RS07770 PF00005 ABC transporter STR_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component STR_RS07780 PF00497 Bacterial extracellular solute-binding proteins, family 3 STR_RS07790 PF00817 impB/mucB/samB family STR_RS07790 PF11799 impB/mucB/samB family C-terminal domain STR_RS07790 PF11798 IMS family HHH motif STR_RS07795 PF02901 Pyruvate formate lyase-like STR_RS07795 PF01228 Glycine radical STR_RS07835 PF03649 Uncharacterised protein family (UPF0014) STR_RS07840 PF00005 ABC transporter STR_RS07850 PF00144 Beta-lactamase STR_RS07870 PF00230 Major intrinsic protein STR_RS07875 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain STR_RS07875 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal STR_RS07875 PF02129 X-Pro dipeptidyl-peptidase (S15 family) STR_RS07890 PF00665 Integrase core domain STR_RS07890 PF13333 Integrase core domain STR_RS07920 PF00664 ABC transporter transmembrane region STR_RS07920 PF03412 Peptidase C39 family STR_RS07920 PF00005 ABC transporter STR_RS07925 PF00005 ABC transporter STR_RS07925 PF00664 ABC transporter transmembrane region STR_RS07930 PF00664 ABC transporter transmembrane region STR_RS07930 PF00005 ABC transporter STR_RS07945 PF04055 Radical SAM superfamily STR_RS07950 PF06265 Protein of unknown function (DUF1027) STR_RS07955 PF02872 5'-nucleotidase, C-terminal domain STR_RS07960 PF00270 DEAD/DEAH box helicase STR_RS07960 PF00271 Helicase conserved C-terminal domain STR_RS07965 PF00953 Glycosyl transferase family 4 STR_RS07965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 STR_RS07970 PF03793 PASTA domain STR_RS07970 PF03717 Penicillin-binding Protein dimerisation domain STR_RS07970 PF00905 Penicillin binding protein transpeptidase domain STR_RS07980 PF01795 MraW methylase family STR_RS08000 PF05656 Protein of unknown function (DUF805) STR_RS08010 PF00171 Aldehyde dehydrogenase family STR_RS08015 PF00696 Amino acid kinase family STR_RS08035 PF00580 UvrD/REP helicase N-terminal domain STR_RS08035 PF13361 UvrD-like helicase C-terminal domain STR_RS08035 PF12705 PD-(D/E)XK nuclease superfamily STR_RS08040 PF12705 PD-(D/E)XK nuclease superfamily STR_RS08075 PF17763 Glutaminase/Asparaginase C-terminal domain STR_RS08075 PF00710 Asparaginase, N-terminal STR_RS08080 PF17191 RecG wedge domain STR_RS08080 PF00271 Helicase conserved C-terminal domain STR_RS08080 PF00270 DEAD/DEAH box helicase STR_RS08085 PF00842 Alanine racemase, C-terminal domain STR_RS08085 PF01168 Alanine racemase, N-terminal domain STR_RS08090 PF01648 4'-phosphopantetheinyl transferase superfamily STR_RS08095 PF00793 DAHP synthetase I family STR_RS08100 PF07517 SecA DEAD-like domain STR_RS08100 PF01043 SecA preprotein cross-linking domain STR_RS08100 PF02810 SEC-C motif STR_RS08100 PF07516 SecA Wing and Scaffold domain STR_RS08110 PF01238 Phosphomannose isomerase type I STR_RS08115 PF00480 ROK family STR_RS08120 PF02378 Phosphotransferase system, EIIC STR_RS08120 PF00367 phosphotransferase system, EIIB STR_RS08120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 STR_RS08125 PF08244 Glycosyl hydrolases family 32 C terminal STR_RS08125 PF00251 Glycosyl hydrolases family 32 N-terminal domain STR_RS08135 PF01029 NusB family STR_RS08140 PF03780 Asp23 family, cell envelope-related function STR_RS08145 PF01132 Elongation factor P (EF-P) OB domain STR_RS08145 PF08207 Elongation factor P (EF-P) KOW-like domain STR_RS08145 PF09285 Elongation factor P, C-terminal STR_RS08150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region STR_RS08155 PF00557 Metallopeptidase family M24 STR_RS08155 PF01321 Creatinase/Prolidase N-terminal domain STR_RS08185 PF17760 UvrA interaction domain STR_RS08185 PF00005 ABC transporter STR_RS08185 PF17755 UvrA DNA-binding domain STR_RS08205 PF01084 Ribosomal protein S18 STR_RS08210 PF00436 Single-strand binding protein family STR_RS08215 PF01250 Ribosomal protein S6 STR_RS08230 PF00730 HhH-GPD superfamily base excision DNA repair protein STR_RS08230 PF00633 Helix-hairpin-helix motif STR_RS08230 PF14815 NUDIX domain STR_RS08250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain STR_RS08250 PF01367 5'-3' exonuclease, C-terminal SAM fold STR_RS08250 PF00476 DNA polymerase family A STR_RS08255 PF00488 MutS domain V STR_RS08255 PF01713 Smr domain STR_RS08270 PF11858 Domain of unknown function (DUF3378) STR_RS08270 PF01351 Ribonuclease HII STR_RS08275 PF10502 Signal peptidase, peptidase S26 STR_RS08280 PF14490 Helix-hairpin-helix containing domain STR_RS08280 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain STR_RS08280 PF13538 UvrD-like helicase C-terminal domain STR_RS08290 PF03591 AzlC protein STR_RS08295 PF00814 Glycoprotease family STR_RS08300 PF00583 Acetyltransferase (GNAT) family STR_RS08305 PF00814 Glycoprotease family STR_RS08310 PF07288 Protein of unknown function (DUF1447) STR_RS08315 PF17770 Ribonuclease J C-terminal domain STR_RS08315 PF00753 Metallo-beta-lactamase superfamily STR_RS08315 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain STR_RS08325 PF03951 Glutamine synthetase, beta-Grasp domain STR_RS08325 PF00120 Glutamine synthetase, catalytic domain STR_RS08330 PF13411 MerR HTH family regulatory protein STR_RS08345 PF00162 Phosphoglycerate kinase STR_RS08350 PF01797 Transposase IS200 like STR_RS08365 PF13333 Integrase core domain STR_RS08365 PF00665 Integrase core domain STR_RS08370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain STR_RS08370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain STR_RS08375 PF00679 Elongation factor G C-terminus STR_RS08375 PF14492 Elongation Factor G, domain II STR_RS08375 PF03764 Elongation factor G, domain IV STR_RS08375 PF00009 Elongation factor Tu GTP binding domain STR_RS08375 PF03144 Elongation factor Tu domain 2 STR_RS08380 PF00177 Ribosomal protein S7p/S5e STR_RS08385 PF00164 Ribosomal protein S12/S23 STR_RS08390 PF00156 Phosphoribosyl transferase domain STR_RS08390 PF09182 Bacterial purine repressor, N-terminal STR_RS08395 PF01966 HD domain STR_RS08395 PF01336 OB-fold nucleic acid binding domain STR_RS08400 PF02646 RmuC family STR_RS08410 PF00834 Ribulose-phosphate 3 epimerase family STR_RS08415 PF03193 RsgA GTPase STR_RS08415 PF16745 RsgA N-terminal domain STR_RS08425 PF00398 Ribosomal RNA adenine dimethylase STR_RS08430 PF13331 Domain of unknown function (DUF4093) STR_RS08435 PF01026 TatD related DNase STR_RS08440 PF13380 CoA binding domain STR_RS08445 PF00085 Thioredoxin STR_RS08450 PF01661 Macro domain STR_RS08485 PF01702 Queuine tRNA-ribosyltransferase STR_RS08490 PF01797 Transposase IS200 like STR_RS08495 PF00468 Ribosomal protein L34 STR_RS08505 PF02096 60Kd inner membrane protein STR_RS08510 PF00825 Ribonuclease P STR_RS08515 PF00206 Lyase STR_RS08515 PF14698 Argininosuccinate lyase C-terminal STR_RS08520 PF00764 Arginosuccinate synthase STR_RS08525 PF00749 tRNA synthetases class I (E and Q), catalytic domain STR_RS08535 PF00687 Ribosomal protein L1p/L10e family STR_RS08540 PF03946 Ribosomal protein L11, N-terminal domain STR_RS08540 PF00298 Ribosomal protein L11, RNA binding domain STR_RS08550 PF00484 Carbonic anhydrase STR_RS08555 PF01987 Mitochondrial biogenesis AIM24 STR_RS08560 PF01987 Mitochondrial biogenesis AIM24 STR_RS08565 PF18073 Rubredoxin metal binding domain STR_RS08570 PF00692 dUTPase STR_RS08600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus STR_RS08600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus STR_RS08605 PF00483 Nucleotidyl transferase STR_RS08610 PF01694 Rhomboid family STR_RS08615 PF01812 5-formyltetrahydrofolate cyclo-ligase family STR_RS08620 PF01546 Peptidase family M20/M25/M40 STR_RS08620 PF07687 Peptidase dimerisation domain STR_RS08625 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal STR_RS08625 PF00132 Bacterial transferase hexapeptide (six repeats) STR_RS08625 PF14602 Hexapeptide repeat of succinyl-transferase STR_RS08635 PF13649 Methyltransferase domain STR_RS08650 PF14437 MafB19-like deaminase STR_RS08655 PF00436 Single-strand binding protein family STR_RS08660 PF01206 Sulfurtransferase TusA STR_RS08665 PF04143 Sulphur transport STR_RS08670 PF14794 Domain of unknown function (DUF4479) STR_RS08670 PF01588 Putative tRNA binding domain STR_RS08675 PF00085 Thioredoxin STR_RS08685 PF05343 M42 glutamyl aminopeptidase STR_RS08690 PF14748 Pyrroline-5-carboxylate reductase dimerisation STR_RS08690 PF03807 NADP oxidoreductase coenzyme F420-dependent STR_RS08695 PF02517 CPBP intramembrane metalloprotease STR_RS08710 PF01381 Helix-turn-helix STR_RS08715 PF00871 Acetokinase family STR_RS08750 PF00482 Type II secretion system (T2SS), protein F STR_RS08755 PF00437 Type II/IV secretion system protein STR_RS08765 PF04997 RNA polymerase Rpb1, domain 1 STR_RS08765 PF00623 RNA polymerase Rpb1, domain 2 STR_RS08765 PF04983 RNA polymerase Rpb1, domain 3 STR_RS08765 PF05000 RNA polymerase Rpb1, domain 4 STR_RS08765 PF04998 RNA polymerase Rpb1, domain 5 STR_RS08770 PF00562 RNA polymerase Rpb2, domain 6 STR_RS08770 PF10385 RNA polymerase beta subunit external 1 domain STR_RS08770 PF04565 RNA polymerase Rpb2, domain 3 STR_RS08770 PF04560 RNA polymerase Rpb2, domain 7 STR_RS08770 PF04561 RNA polymerase Rpb2, domain 2 STR_RS08770 PF04563 RNA polymerase beta subunit STR_RS08775 PF00905 Penicillin binding protein transpeptidase domain STR_RS08775 PF00912 Transglycosylase STR_RS08780 PF00579 tRNA synthetases class I (W and Y) STR_RS08780 PF01479 S4 domain STR_RS08785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain STR_RS08785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain STR_RS08790 PF10369 Small subunit of acetolactate synthase STR_RS08790 PF01842 ACT domain STR_RS08795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain STR_RS08795 PF00205 Thiamine pyrophosphate enzyme, central domain STR_RS08795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain STR_RS08800 PF00920 Dehydratase family STR_RS08805 PF13684 Dihydroxyacetone kinase family STR_RS08805 PF02734 DAK2 domain STR_RS08810 PF03780 Asp23 family, cell envelope-related function STR_RS08815 PF01554 MatE STR_RS08820 PF00291 Pyridoxal-phosphate dependent enzyme STR_RS08820 PF14821 Threonine synthase N terminus STR_RS08830 PF00465 Iron-containing alcohol dehydrogenase STR_RS08835 PF00465 Iron-containing alcohol dehydrogenase STR_RS08835 PF00171 Aldehyde dehydrogenase family STR_RS08840 PF00171 Aldehyde dehydrogenase family STR_RS08840 PF00465 Iron-containing alcohol dehydrogenase STR_RS08850 PF00171 Aldehyde dehydrogenase family STR_RS08850 PF00465 Iron-containing alcohol dehydrogenase STR_RS08855 PF05649 Peptidase family M13 STR_RS08855 PF01431 Peptidase family M13 STR_RS08860 PF00128 Alpha amylase, catalytic domain STR_RS08860 PF16657 Maltogenic Amylase, C-terminal domain STR_RS08865 PF11941 Domain of unknown function (DUF3459) STR_RS08865 PF00128 Alpha amylase, catalytic domain STR_RS08875 PF00392 Bacterial regulatory proteins, gntR family STR_RS08880 PF00392 Bacterial regulatory proteins, gntR family STR_RS08880 PF07702 UTRA domain STR_RS08885 PF04260 Protein of unknown function (DUF436) STR_RS08910 PF01116 Fructose-bisphosphate aldolase class-II STR_RS08945 PF01196 Ribosomal protein L17 STR_RS08950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain STR_RS08950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain STR_RS08950 PF01000 RNA polymerase Rpb3/RpoA insert domain STR_RS08955 PF00411 Ribosomal protein S11 STR_RS08960 PF00416 Ribosomal protein S13/S18 STR_RS08965 PF01176 Translation initiation factor 1A / IF-1 STR_RS08970 PF05191 Adenylate kinase, active site lid STR_RS08975 PF00344 SecY translocase STR_RS08980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A STR_RS08985 PF00327 Ribosomal protein L30p/L7e STR_RS08990 PF03719 Ribosomal protein S5, C-terminal domain STR_RS08990 PF00333 Ribosomal protein S5, N-terminal domain STR_RS08995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast STR_RS09000 PF00347 Ribosomal protein L6 STR_RS09005 PF00410 Ribosomal protein S8 STR_RS09010 PF00253 Ribosomal protein S14p/S29e STR_RS09015 PF00281 Ribosomal protein L5 STR_RS09015 PF00673 ribosomal L5P family C-terminus STR_RS09020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 STR_RS09020 PF00467 KOW motif STR_RS09025 PF00238 Ribosomal protein L14p/L23e STR_RS09030 PF00366 Ribosomal protein S17 STR_RS09035 PF00831 Ribosomal L29 protein STR_RS09040 PF00252 Ribosomal protein L16p/L10e STR_RS09045 PF07650 KH domain STR_RS09045 PF00189 Ribosomal protein S3, C-terminal domain STR_RS09050 PF00237 Ribosomal protein L22p/L17e STR_RS09055 PF00203 Ribosomal protein S19 STR_RS09060 PF00181 Ribosomal Proteins L2, RNA binding domain STR_RS09060 PF03947 Ribosomal Proteins L2, C-terminal domain STR_RS09065 PF00276 Ribosomal protein L23 STR_RS09070 PF00573 Ribosomal protein L4/L1 family STR_RS09075 PF00297 Ribosomal protein L3 STR_RS09080 PF00338 Ribosomal protein S10p/S20e STR_RS09085 PF05496 Holliday junction DNA helicase RuvB P-loop domain STR_RS09085 PF17864 RuvB AAA lid domain STR_RS09085 PF05491 RuvB C-terminal winged helix domain STR_RS09090 PF01757 Acyltransferase family STR_RS09100 PF01451 Low molecular weight phosphotyrosine protein phosphatase STR_RS09105 PF00709 Adenylosuccinate synthetase STR_RS09120 PF00899 ThiF family STR_RS09135 PF00069 Protein kinase domain STR_RS09145 PF01381 Helix-turn-helix STR_RS09155 PF00664 ABC transporter transmembrane region STR_RS09155 PF00005 ABC transporter STR_RS09185 PF16193 AAA C-terminal domain STR_RS09185 PF05496 Holliday junction DNA helicase RuvB P-loop domain STR_RS09185 PF12002 MgsA AAA+ ATPase C terminal STR_RS09190 PF00830 Ribosomal L28 family STR_RS09195 PF06135 IreB regulatory phosphoprotein STR_RS09200 PF03652 Holliday junction resolvase STR_RS09205 PF06949 Protein of unknown function (DUF1292) STR_RS09215 PF13597 Anaerobic ribonucleoside-triphosphate reductase STR_RS09215 PF03477 ATP cone domain STR_RS09230 PF03883 Peroxide stress protein YaaA STR_RS09235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 STR_RS09235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) STR_RS09240 PF00152 tRNA synthetases class II (D, K and N) STR_RS09240 PF01336 OB-fold nucleic acid binding domain STR_RS09240 PF02938 GAD domain STR_RS09250 PF13393 Histidyl-tRNA synthetase STR_RS09250 PF03129 Anticodon binding domain STR_RS09255 PF01717 Cobalamin-independent synthase, Catalytic domain STR_RS09260 PF01717 Cobalamin-independent synthase, Catalytic domain STR_RS09265 PF01783 Ribosomal L32p protein family STR_RS09270 PF00471 Ribosomal protein L33 STR_RS09285 PF00781 Diacylglycerol kinase catalytic domain STR_RS09300 PF04226 Transglycosylase associated protein STR_RS09315 PF03780 Asp23 family, cell envelope-related function STR_RS09320 PF05532 CsbD-like STR_RS09355 PF06993 Protein of unknown function (DUF1304) STR_RS09360 PF01479 S4 domain STR_RS09360 PF00163 Ribosomal protein S4/S9 N-terminal domain STR_RS09370 PF00772 DnaB-like helicase N terminal domain STR_RS09370 PF03796 DnaB-like helicase C terminal domain STR_RS09375 PF03948 Ribosomal protein L9, C-terminal domain STR_RS09375 PF01281 Ribosomal protein L9, N-terminal domain STR_RS09380 PF02272 DHHA1 domain STR_RS09380 PF01368 DHH family STR_RS09385 PF13932 GidA associated domain STR_RS09385 PF01134 Glucose inhibited division protein A STR_RS09400 PF06737 Transglycosylase-like domain STR_RS09405 PF01476 LysM domain STR_RS09405 PF06725 3D domain STR_RS09410 PF02361 Cobalt transport protein STR_RS09415 PF00005 ABC transporter STR_RS09420 PF00005 ABC transporter STR_RS09425 PF01066 CDP-alcohol phosphatidyltransferase STR_RS09435 PF00675 Insulinase (Peptidase family M16) STR_RS09435 PF05193 Peptidase M16 inactive domain STR_RS09450 PF02463 RecF/RecN/SMC N terminal domain STR_RS09455 PF00571 CBS domain STR_RS09455 PF00478 IMP dehydrogenase / GMP reductase domain STR_RS09460 PF00579 tRNA synthetases class I (W and Y) STR_RS09465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) STR_RS09465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 STR_RS09470 PF00005 ABC transporter STR_RS09470 PF12848 ABC transporter STR_RS09500 PF02590 Predicted SPOUT methyltransferase STR_RS09505 PF13180 PDZ domain STR_RS09510 PF17762 HTH domain found in ParB protein STR_RS09510 PF02195 ParB-like nuclease domain STR_RS09520 PF00005 ABC transporter STR_RS09520 PF00664 ABC transporter transmembrane region STR_RS09520 PF03412 Peptidase C39 family STR_RS09555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle STR_RS09560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle