locus-tag	class	description
BEN15_RS00005	COG2190	(PTS) system
BEN15_RS00005	COG2211	Major facilitator Superfamily
BEN15_RS00010	COG2017	converts alpha-aldose to the beta-anomer
BEN15_RS00015	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BEN15_RS00030	COG1609	Transcriptional regulator
BEN15_RS00050	COG0488	(ABC) transporter
BEN15_RS00120	COG2801	Transposase and inactivated derivatives
BEN15_RS00170	COG2197	response regulator
BEN15_RS00175	COG4585	Histidine kinase
BEN15_RS00185	COG0515	serine threonine protein kinase
BEN15_RS00185	COG2815	serine threonine protein kinase
BEN15_RS00195	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BEN15_RS00195	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BEN15_RS00205	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BEN15_RS00220	COG0552	protein localization to endoplasmic reticulum
BEN15_RS00225	COG0561	phosphatase activity
BEN15_RS00230	COG0561	phosphatase activity
BEN15_RS00235	COG1725	Transcriptional regulator
BEN15_RS00240	COG1131	(ABC) transporter
BEN15_RS00255	COG0444	Belongs to the ABC transporter superfamily
BEN15_RS00260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEN15_RS00265	COG0601	transmembrane transport
BEN15_RS00270	COG4166	transmembrane transport
BEN15_RS00280	COG4166	transmembrane transport
BEN15_RS00285	COG4608	Belongs to the ABC transporter superfamily
BEN15_RS00295	COG2223	nitrite transmembrane transporter activity
BEN15_RS00300	COG2801	Transposase and inactivated derivatives
BEN15_RS00320	COG0280	phosphate acetyltransferase
BEN15_RS00325	COG0564	pseudouridine synthase activity
BEN15_RS00335	COG2357	RelA SpoT domain protein
BEN15_RS00350	COG1104	cysteine desulfurase activity
BEN15_RS00365	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BEN15_RS00370	COG2003	Belongs to the UPF0758 family
BEN15_RS00390	COG0463	Glycosyl transferase, family 2
BEN15_RS00415	COG1442	glycosyl transferase family 8
BEN15_RS00415	COG1216	Glycosyl transferase, family 2
BEN15_RS00435	COG0463	Glycosyl transferase, family 2
BEN15_RS00440	COG1216	Glycosyl transferase, family 2
BEN15_RS00445	COG1216	Glycosyl transferase, family 2
BEN15_RS00455	COG1091	dTDP-4-dehydrorhamnose reductase activity
BEN15_RS00465	COG0463	Glycosyl transferase, family 2
BEN15_RS00470	COG2151	metal-sulfur cluster biosynthetic enzyme
BEN15_RS00475	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BEN15_RS00480	COG0358	DNA primase activity
BEN15_RS00485	COG1970	mechanosensitive ion channel activity
BEN15_RS00495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS00500	COG0436	Aminotransferase
BEN15_RS00505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS00510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS00515	COG1051	belongs to the nudix hydrolase family
BEN15_RS00540	COG0765	amino acid transport
BEN15_RS00545	COG1126	abc transporter atp-binding protein
BEN15_RS00565	COG1187	pseudouridine synthase activity
BEN15_RS00610	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEN15_RS00615	COG1518	maintenance of DNA repeat elements
BEN15_RS00625	COG0560	Phosphoserine phosphatase
BEN15_RS00635	COG0187	DNA topoisomerase II activity
BEN15_RS00645	COG1346	cytolysis
BEN15_RS00650	COG1380	Effector of murein hydrolase LrgA
BEN15_RS00660	COG1393	Belongs to the ArsC family
BEN15_RS00670	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BEN15_RS00705	COG1177	transmembrane transport
BEN15_RS00710	COG1176	ABC-type spermidine putrescine transport system, permease component I
BEN15_RS00750	COG0531	amino acid
BEN15_RS00755	COG0285	dihydrofolate synthase activity
BEN15_RS00760	COG1837	Belongs to the UPF0109 family
BEN15_RS00780	COG0708	Exodeoxyribonuclease III
BEN15_RS00795	COG1597	lipid kinase activity
BEN15_RS00805	COG4708	membrane
BEN15_RS00815	COG0024	Methionine aminopeptidase
BEN15_RS00820	COG4109	DRTGG domain
BEN15_RS00830	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEN15_RS00835	COG2333	competence protein COMEC
BEN15_RS00835	COG0658	competence protein
BEN15_RS00840	COG1596	polysaccharide export
BEN15_RS00840	COG1555	photosystem II stabilization
BEN15_RS00845	COG0204	Acyl-transferase
BEN15_RS00855	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BEN15_RS00865	COG0513	Belongs to the DEAD box helicase family
BEN15_RS00895	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BEN15_RS00910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS00915	COG1126	abc transporter atp-binding protein
BEN15_RS00920	COG0765	amino acid transport
BEN15_RS00925	COG0765	amino acid transport
BEN15_RS00930	COG1181	Belongs to the D-alanine--D-alanine ligase family
BEN15_RS00940	COG2217	Heavy metal translocating P-type atpase
BEN15_RS00955	COG0159	tryptophan synthase activity
BEN15_RS00965	COG0135	phosphoribosylanthranilate isomerase activity
BEN15_RS00980	COG0512	Glutamine amidotransferase of anthranilate synthase
BEN15_RS00985	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BEN15_RS00990	COG1605	Chorismate mutase
BEN15_RS00990	COG0287	Prephenate dehydrogenase
BEN15_RS01000	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BEN15_RS01025	COG1301	dicarboxylic acid transport
BEN15_RS01060	COG2176	DNA-directed DNA polymerase activity
BEN15_RS01070	COG2151	metal-sulfur cluster biosynthetic enzyme
BEN15_RS01080	COG2081	HI0933 family
BEN15_RS01105	COG1131	(ABC) transporter
BEN15_RS01110	COG0537	adenosine 5'-monophosphoramidase activity
BEN15_RS01140	COG2226	methyltransferase
BEN15_RS01145	COG0799	negative regulation of ribosome biogenesis
BEN15_RS01150	COG1713	HD superfamily hydrolase involved in NAD metabolism
BEN15_RS01155	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BEN15_RS01160	COG1534	Rna-binding protein
BEN15_RS01165	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BEN15_RS01170	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BEN15_RS01205	COG2723	6-phospho-beta-galactosidase activity
BEN15_RS01220	COG1335	isochorismatase
BEN15_RS01230	COG0436	Aminotransferase
BEN15_RS01235	COG0589	response to stress
BEN15_RS01250	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BEN15_RS01255	COG1253	flavin adenine dinucleotide binding
BEN15_RS01260	COG1119	ATPase activity
BEN15_RS01265	COG0025	NhaP-type Na H and K H
BEN15_RS01275	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BEN15_RS01280	COG1242	4 iron, 4 sulfur cluster binding
BEN15_RS01285	COG3480	Lon protease (S16) C-terminal proteolytic domain
BEN15_RS01290	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BEN15_RS01295	COG0742	ribosomal rna small subunit methyltransferase
BEN15_RS01300	COG0492	ferredoxin-NADP+ reductase activity
BEN15_RS01310	COG1126	abc transporter atp-binding protein
BEN15_RS01320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS01340	COG1882	Formate acetyltransferase
BEN15_RS01370	COG0390	transport system, permease component
BEN15_RS01375	COG4619	ABC transporter
BEN15_RS01380	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BEN15_RS01400	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BEN15_RS01410	COG1132	(ABC) transporter
BEN15_RS01415	COG1132	(ABC) transporter
BEN15_RS01435	COG4470	Protein conserved in bacteria
BEN15_RS01440	COG0737	Belongs to the 5'-nucleotidase family
BEN15_RS01445	COG0513	Belongs to the DEAD box helicase family
BEN15_RS01455	COG0768	penicillin binding
BEN15_RS01485	COG3152	Membrane
BEN15_RS01495	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BEN15_RS01520	COG1074	ATP-dependent DNA helicase activity
BEN15_RS01525	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BEN15_RS01555	COG0561	phosphatase activity
BEN15_RS01560	COG0252	asparaginase activity
BEN15_RS01565	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BEN15_RS01570	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BEN15_RS01580	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BEN15_RS01585	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BEN15_RS01590	COG0653	protein targeting
BEN15_RS01600	COG1482	cell wall glycoprotein biosynthetic process
BEN15_RS01605	COG1940	carbohydrate kinase activity
BEN15_RS01610	COG1263	PTS System
BEN15_RS01610	COG2190	(PTS) system
BEN15_RS01610	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN15_RS01615	COG1621	beta-fructofuranosidase activity
BEN15_RS01620	COG1609	Transcriptional regulator
BEN15_RS01640	COG2131	deaminase
BEN15_RS01645	COG0006	proline dipeptidase activity
BEN15_RS01660	COG1131	(ABC) transporter
BEN15_RS01735	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEN15_RS01735	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEN15_RS01760	COG0681	Belongs to the peptidase S26 family
BEN15_RS01765	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BEN15_RS01775	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BEN15_RS01785	COG0456	acetyltransferase
BEN15_RS01790	COG1214	PFAM Peptidase M22, glycoprotease
BEN15_RS01810	COG0174	glutamine synthetase
BEN15_RS01815	COG0789	Transcriptional regulator
BEN15_RS01855	COG2801	Transposase and inactivated derivatives
BEN15_RS01860	COG2801	Transposase and inactivated derivatives
BEN15_RS01885	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BEN15_RS01920	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BEN15_RS01930	COG0084	hydrolase, TatD family'
BEN15_RS01935	COG1832	CoA-binding protein
BEN15_RS01940	COG3118	belongs to the thioredoxin family
BEN15_RS01995	COG0706	membrane insertase activity
BEN15_RS02060	COG0756	dUTP diphosphatase activity
BEN15_RS02095	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BEN15_RS02100	COG0705	Rhomboid family
BEN15_RS02100	COG0457	Tetratricopeptide repeat
BEN15_RS02105	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BEN15_RS02125	COG2226	methyltransferase
BEN15_RS02155	COG0425	Belongs to the sulfur carrier protein TusA family
BEN15_RS02160	COG2391	methyltransferase activity
BEN15_RS02165	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN15_RS02170	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BEN15_RS02180	COG1363	Peptidase, m42
BEN15_RS02185	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BEN15_RS02190	COG1266	CAAX protease self-immunity
BEN15_RS02250	COG1459	type II secretion system
BEN15_RS02255	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BEN15_RS02290	COG0440	acetolactate synthase activity
BEN15_RS02295	COG0028	Belongs to the TPP enzyme family
BEN15_RS02300	COG0129	dihydroxy-acid dehydratase activity
BEN15_RS02305	COG1461	Dihydroxyacetone kinase
BEN15_RS02315	COG0534	Mate efflux family protein
BEN15_RS02335	COG1012	belongs to the aldehyde dehydrogenase family
BEN15_RS02335	COG1454	alcohol dehydrogenase
BEN15_RS02340	COG1012	belongs to the aldehyde dehydrogenase family
BEN15_RS02340	COG1454	alcohol dehydrogenase
BEN15_RS02345	COG1012	belongs to the aldehyde dehydrogenase family
BEN15_RS02345	COG1454	alcohol dehydrogenase
BEN15_RS02350	COG3590	peptidase
BEN15_RS02355	COG0366	Alpha amylase catalytic
BEN15_RS02360	COG0366	Alpha amylase catalytic
BEN15_RS02365	COG0366	Alpha amylase catalytic
BEN15_RS02375	COG1609	Transcriptional regulator
BEN15_RS02380	COG2188	Transcriptional regulator
BEN15_RS02385	COG4475	Protein of unknown function (DUF436)
BEN15_RS02420	COG0191	fructose-bisphosphate aldolase activity
BEN15_RS02470	COG0201	protein transport
BEN15_RS02620	COG0515	serine threonine protein kinase
BEN15_RS02625	COG1132	(ABC) transporter
BEN15_RS02630	COG1396	sequence-specific DNA binding
BEN15_RS02640	COG1132	(ABC) transporter
BEN15_RS02660	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BEN15_RS02690	COG1328	CTP reductase activity
BEN15_RS02700	COG0602	queuosine metabolic process
BEN15_RS02710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BEN15_RS02735	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BEN15_RS02745	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BEN15_RS02765	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN15_RS02770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN15_RS02770	COG1028	Short-chain dehydrogenase reductase Sdr
BEN15_RS02770	COG4221	oxidoreductase activity
BEN15_RS02770	COG3321	synthase
BEN15_RS02780	COG1136	(ABC) transporter
BEN15_RS02810	COG1597	lipid kinase activity
BEN15_RS02825	COG2261	transglycosylase associated protein
BEN15_RS02845	COG3237	CsbD-like
BEN15_RS02870	COG1511	domain protein
BEN15_RS02870	COG1511	domain protein
BEN15_RS02880	COG3759	membrane
BEN15_RS02900	COG0305	Participates in initiation and elongation during chromosome replication
BEN15_RS02930	COG0741	lytic transglycosylase activity
BEN15_RS02935	COG1388	LysM domain
BEN15_RS02935	COG3584	3D domain protein
BEN15_RS02940	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEN15_RS02955	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BEN15_RS02965	COG0612	Peptidase, M16
BEN15_RS02995	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BEN15_RS03000	COG0488	(ABC) transporter
BEN15_RS03035	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BEN15_RS03040	COG1475	DNA binding
BEN15_RS03050	COG0592	DNA-directed DNA polymerase activity
BEN15_RS03060	COG0012	GTP binding
BEN15_RS03070	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BEN15_RS03075	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BEN15_RS03105	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BEN15_RS03130	COG2801	Transposase and inactivated derivatives
BEN15_RS03250	COG3942	CHAP domain
BEN15_RS03270	COG0436	Aminotransferase
BEN15_RS03285	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEN15_RS03295	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEN15_RS03310	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BEN15_RS03330	COG2801	Transposase and inactivated derivatives
BEN15_RS03340	COG0151	Belongs to the GarS family
BEN15_RS03345	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BEN15_RS03370	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BEN15_RS03385	COG4550	Control of competence regulator ComK, YlbF/YmcA
BEN15_RS03430	COG1546	Belongs to the CinA family
BEN15_RS03430	COG1058	Belongs to the CinA family
BEN15_RS03440	COG1393	Belongs to the ArsC family
BEN15_RS03530	COG2309	aminopeptidase activity
BEN15_RS03545	COG0431	NADPH-dependent FMN reductase
BEN15_RS03550	COG2801	Transposase and inactivated derivatives
BEN15_RS03580	COG4463	regulation of RNA biosynthetic process
BEN15_RS03585	COG0542	response to heat
BEN15_RS03600	COG1686	Belongs to the peptidase S11 family
BEN15_RS03615	COG1045	serine acetyltransferase
BEN15_RS03625	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BEN15_RS03640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEN15_RS03665	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BEN15_RS03700	COG3830	Belongs to the UPF0237 family
BEN15_RS03710	COG0588	phosphoglycerate mutase activity
BEN15_RS03715	COG1876	peptidase activity
BEN15_RS03750	COG0351	phosphomethylpyrimidine kinase
BEN15_RS03855	COG1473	amidohydrolase
BEN15_RS03860	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BEN15_RS03875	COG0668	transmembrane transport
BEN15_RS03890	COG0504	CTP synthase activity
BEN15_RS03900	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
BEN15_RS03910	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BEN15_RS03915	COG0737	Belongs to the 5'-nucleotidase family
BEN15_RS03925	COG0737	Belongs to the 5'-nucleotidase family
BEN15_RS03930	COG0737	Belongs to the 5'-nucleotidase family
BEN15_RS03965	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BEN15_RS03995	COG1126	abc transporter atp-binding protein
BEN15_RS04000	COG0765	amino acid transport
BEN15_RS04005	COG1968	undecaprenyl-diphosphatase activity
BEN15_RS04015	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BEN15_RS04025	COG0719	Fe-S assembly protein
BEN15_RS04030	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEN15_RS04040	COG0719	Fe-S assembly protein
BEN15_RS04050	COG0601	transmembrane transport
BEN15_RS04070	COG0444	Belongs to the ABC transporter superfamily
BEN15_RS04075	COG0444	Belongs to the ABC transporter superfamily
BEN15_RS04080	COG4608	Belongs to the ABC transporter superfamily
BEN15_RS04095	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BEN15_RS04110	COG1121	(ABC) transporter
BEN15_RS04115	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BEN15_RS04125	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN15_RS04125	COG1263	PTS System
BEN15_RS04125	COG2190	(PTS) system
BEN15_RS04130	COG2190	(PTS) system
BEN15_RS04130	COG1263	PTS System
BEN15_RS04130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN15_RS04165	COG4589	Belongs to the CDS family
BEN15_RS04180	COG4120	Belongs to the binding-protein-dependent transport system permease family
BEN15_RS04185	COG1116	anion transmembrane transporter activity
BEN15_RS04185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BEN15_RS04210	COG2801	Transposase and inactivated derivatives
BEN15_RS04230	COG0564	pseudouridine synthase activity
BEN15_RS04235	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BEN15_RS04260	COG1349	DNA-binding transcription factor activity
BEN15_RS04285	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BEN15_RS04300	COG3579	cysteine-type endopeptidase activity
BEN15_RS04305	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BEN15_RS04330	COG0116	Belongs to the methyltransferase superfamily
BEN15_RS04340	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BEN15_RS04360	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BEN15_RS04385	COG1254	Belongs to the acylphosphatase family
BEN15_RS04390	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEN15_RS04435	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BEN15_RS04455	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BEN15_RS04460	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BEN15_RS04465	COG1187	pseudouridine synthase activity
BEN15_RS04475	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BEN15_RS04480	COG0569	domain protein
BEN15_RS04490	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BEN15_RS04495	COG0671	phosphoesterase, PA-phosphatase related
BEN15_RS04515	COG2274	protein secretion by the type I secretion system
BEN15_RS04520	COG2274	protein secretion by the type I secretion system
BEN15_RS04525	COG2274	protein secretion by the type I secretion system
BEN15_RS04575	COG0829	nickel cation binding
BEN15_RS04580	COG0310	cobalt ion transport
BEN15_RS04590	COG1122	ATPase activity
BEN15_RS04595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS04600	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BEN15_RS04620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS04625	COG1464	Belongs to the NlpA lipoprotein family
BEN15_RS04660	COG1122	ATPase activity
BEN15_RS04670	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BEN15_RS04680	COG0842	Transport permease protein
BEN15_RS04680	COG1129	ABC transporter
BEN15_RS04705	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BEN15_RS04720	COG0745	RESPONSE REGULATOR receiver
BEN15_RS04725	COG5002	protein histidine kinase activity
BEN15_RS04740	COG1484	DNA-dependent DNA replication
BEN15_RS04760	COG2801	Transposase and inactivated derivatives
BEN15_RS04775	COG3716	PTS system mannose fructose sorbose family IID component
BEN15_RS04780	COG3715	PTS system
BEN15_RS04790	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BEN15_RS04795	COG0561	phosphatase activity
BEN15_RS04800	COG2252	PERMEase
BEN15_RS04805	COG0802	atpase or kinase
BEN15_RS04810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEN15_RS04815	COG1316	TRANSCRIPTIONal
BEN15_RS04825	COG0195	Participates in both transcription termination and antitermination
BEN15_RS04830	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BEN15_RS04850	COG1611	Belongs to the LOG family
BEN15_RS04870	COG2244	polysaccharide biosynthetic process
BEN15_RS04875	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BEN15_RS04880	COG0626	cystathionine gamma-synthase activity
BEN15_RS04885	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BEN15_RS04915	COG4471	UPF0298 protein
BEN15_RS04925	COG0559	Belongs to the binding-protein-dependent transport system permease family
BEN15_RS04945	COG0517	IMP dehydrogenase activity
BEN15_RS04960	COG1739	Uncharacterized protein family UPF0029
BEN15_RS04965	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BEN15_RS04970	COG1040	competence protein
BEN15_RS05060	COG0527	aspartate kinase activity
BEN15_RS05065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BEN15_RS05070	COG1024	Enoyl-CoA hydratase
BEN15_RS05075	COG1846	Transcriptional regulator
BEN15_RS05095	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BEN15_RS05100	COG1028	Short-chain dehydrogenase reductase Sdr
BEN15_RS05105	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BEN15_RS05120	COG0439	Biotin carboxylase
BEN15_RS05150	COG0732	type I restriction modification DNA specificity domain
BEN15_RS05165	COG0582	viral genome integration into host DNA
BEN15_RS05190	COG1396	sequence-specific DNA binding
BEN15_RS05200	COG0076	glutamate decarboxylase activity
BEN15_RS05205	COG0531	amino acid
BEN15_RS05230	COG1349	DNA-binding transcription factor activity
BEN15_RS05235	COG1105	Belongs to the carbohydrate kinase PfkB family
BEN15_RS05245	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEN15_RS05250	COG0285	dihydrofolate synthase activity
BEN15_RS05260	COG1104	cysteine desulfurase activity
BEN15_RS05325	COG0488	(ABC) transporter
BEN15_RS05345	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BEN15_RS05350	COG0242	peptide deformylase activity
BEN15_RS05410	COG1702	phosphate starvation-inducible protein PhoH
BEN15_RS05430	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN15_RS05430	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEN15_RS05455	COG4122	O-methyltransferase activity
BEN15_RS05460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BEN15_RS05490	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BEN15_RS05495	COG0436	Aminotransferase
BEN15_RS05510	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BEN15_RS05515	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BEN15_RS05520	COG0726	polysaccharide deacetylase
BEN15_RS05535	COG2962	Rard protein
BEN15_RS05565	COG0525	valine-tRNA ligase activity
BEN15_RS05575	COG0356	it plays a direct role in the translocation of protons across the membrane
BEN15_RS05610	COG0772	Belongs to the SEDS family
BEN15_RS05630	COG0470	DNA polymerase III
BEN15_RS05635	COG1774	PSP1 C-terminal conserved region
BEN15_RS05640	COG4467	Involved in initiation control of chromosome replication
BEN15_RS05650	COG0004	ammonium transporteR
BEN15_RS05655	COG0347	Belongs to the P(II) protein family
BEN15_RS05660	COG1705	Flagellar rod assembly protein muramidase FlgJ
BEN15_RS05660	COG1388	LysM domain
BEN15_RS05715	COG1113	amino acid transport
BEN15_RS05725	COG2190	(PTS) system
BEN15_RS05725	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BEN15_RS05725	COG1263	PTS System
BEN15_RS05760	COG0583	DNA-binding transcription factor activity
BEN15_RS05770	COG0564	pseudouridine synthase activity
BEN15_RS05790	COG0505	Belongs to the CarA family
BEN15_RS05825	COG0577	efflux transmembrane transporter activity
BEN15_RS05845	COG1132	(ABC) transporter
BEN15_RS05865	COG3279	Response regulator of the LytR AlgR family
BEN15_RS05875	COG1131	(ABC) transporter
BEN15_RS05905	COG1187	pseudouridine synthase activity
BEN15_RS05910	COG1473	amidohydrolase
BEN15_RS05915	COG0686	Belongs to the AlaDH PNT family
BEN15_RS05920	COG0686	Belongs to the AlaDH PNT family
BEN15_RS05925	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEN15_RS05990	COG0438	transferase activity, transferring glycosyl groups
BEN15_RS06020	COG1272	protein, Hemolysin III
BEN15_RS06035	COG3425	synthase
BEN15_RS06045	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BEN15_RS06060	COG0833	amino acid
BEN15_RS06065	COG2040	homocysteine
BEN15_RS06085	COG0187	DNA topoisomerase II activity
BEN15_RS06095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BEN15_RS06115	COG0539	negative regulation of cytoplasmic translation
BEN15_RS06145	COG0673	inositol 2-dehydrogenase activity
BEN15_RS06165	COG0494	nUDIX hydrolase
BEN15_RS06170	COG0542	response to heat
BEN15_RS06175	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BEN15_RS06180	COG4703	Protein of unknown function (DUF1797)
BEN15_RS06185	COG0765	amino acid transport
BEN15_RS06230	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BEN15_RS06235	COG0768	penicillin binding
BEN15_RS06240	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BEN15_RS06250	COG3711	transcriptional antiterminator
BEN15_RS06260	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BEN15_RS06265	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BEN15_RS06270	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BEN15_RS06275	COG0237	dephospho-CoA kinase activity
BEN15_RS06280	COG2814	Major facilitator Superfamily
BEN15_RS06290	COG0557	exoribonuclease II activity
BEN15_RS06305	COG1185	polyribonucleotide nucleotidyltransferase activity
BEN15_RS06310	COG0006	proline dipeptidase activity
BEN15_RS06315	COG1609	Transcriptional regulator
BEN15_RS06345	COG1368	sulfuric ester hydrolase activity
BEN15_RS06350	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BEN15_RS06375	COG0287	Prephenate dehydrogenase
BEN15_RS06400	COG0077	Prephenate dehydratase
BEN15_RS06435	COG0270	DNA (cytosine-5-)-methyltransferase activity
BEN15_RS06510	COG1131	(ABC) transporter
BEN15_RS06555	COG3843	relaxase mobilization nuclease domain protein
BEN15_RS06575	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BEN15_RS06580	COG2274	protein secretion by the type I secretion system
BEN15_RS06680	COG1518	maintenance of DNA repeat elements
BEN15_RS06685	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEN15_RS06695	COG3689	TIGRFAM TIGR03943 family protein
BEN15_RS06700	COG0701	Predicted permease
BEN15_RS06705	COG2183	response to ionizing radiation
BEN15_RS06750	COG0826	peptidase U32
BEN15_RS06760	COG1268	BioY protein
BEN15_RS06770	COG4443	Transcriptional Coactivator p15 (PC4)
BEN15_RS06775	COG1914	H( )-stimulated, divalent metal cation uptake system
BEN15_RS06785	COG0494	nUDIX hydrolase
BEN15_RS06805	COG1705	Flagellar rod assembly protein muramidase FlgJ
BEN15_RS06805	COG1388	LysM domain
BEN15_RS06825	COG0406	alpha-ribazole phosphatase activity
BEN15_RS06830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BEN15_RS06865	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BEN15_RS06910	COG1704	LemA family
BEN15_RS06940	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BEN15_RS06950	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BEN15_RS06955	COG0783	Belongs to the Dps family
BEN15_RS06960	COG0735	belongs to the Fur family
BEN15_RS06965	COG4483	Protein conserved in bacteria
BEN15_RS06970	COG1940	carbohydrate kinase activity
BEN15_RS06975	COG1217	gtp-binding protein TYPA
BEN15_RS07005	COG0849	cell division
BEN15_RS07015	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BEN15_RS07035	COG3599	regulation of cell shape
BEN15_RS07070	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BEN15_RS07075	COG0625	glutathione transferase activity
BEN15_RS07080	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEN15_RS07085	COG1435	thymidine kinase activity
BEN15_RS07095	COG2890	protein-(glutamine-N5) methyltransferase activity
BEN15_RS07125	COG1132	(ABC) transporter
BEN15_RS07140	COG1696	Membrane protein involved in D-alanine export
BEN15_RS07150	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BEN15_RS07165	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BEN15_RS07170	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BEN15_RS07190	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEN15_RS07195	COG4684	Psort location CytoplasmicMembrane, score
BEN15_RS07200	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BEN15_RS07225	COG5002	protein histidine kinase activity
BEN15_RS07240	COG2813	Specifically methylates the guanine in position
BEN15_RS07245	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BEN15_RS07260	COG0295	cytidine deaminase activity
BEN15_RS07265	COG1744	ABC transporter substrate-binding protein PnrA-like
BEN15_RS07270	COG3845	ABC transporter
BEN15_RS07275	COG4603	Belongs to the binding-protein-dependent transport system permease family
BEN15_RS07280	COG1079	Belongs to the binding-protein-dependent transport system permease family
BEN15_RS07290	COG1199	ATP-dependent helicase activity
BEN15_RS07290	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BEN15_RS07300	COG0436	Aminotransferase
BEN15_RS07325	COG0251	oxidation-reduction process
BEN15_RS07335	COG0720	synthase
BEN15_RS07395	COG2801	Transposase and inactivated derivatives
BEN15_RS07450	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BEN15_RS07495	COG2217	Heavy metal translocating P-type atpase
BEN15_RS07510	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BEN15_RS07515	COG0626	cystathionine gamma-synthase activity
BEN15_RS07520	COG1045	serine acetyltransferase
BEN15_RS07540	COG4975	Glucose uptake
BEN15_RS07560	COG0803	Belongs to the bacterial solute-binding protein 9 family
BEN15_RS07560	COG3443	Belongs to the bacterial solute-binding protein 9 family
BEN15_RS07580	COG3942	CHAP domain
BEN15_RS07580	COG1705	Flagellar rod assembly protein muramidase FlgJ
BEN15_RS07600	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BEN15_RS07605	COG2824	Alkylphosphonate utilization operon protein PhnA
BEN15_RS07610	COG0765	amino acid transport
BEN15_RS07615	COG1126	abc transporter atp-binding protein
BEN15_RS07620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS07630	COG1064	alcohol dehydrogenase
BEN15_RS07635	COG1064	alcohol dehydrogenase
BEN15_RS07640	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BEN15_RS07645	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BEN15_RS07645	COG0519	Catalyzes the synthesis of GMP from XMP
BEN15_RS07650	COG2188	Transcriptional regulator
BEN15_RS07660	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BEN15_RS07670	COG1827	regulation of RNA biosynthetic process
BEN15_RS07680	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BEN15_RS07690	COG1940	carbohydrate kinase activity
BEN15_RS07695	COG0758	DNA mediated transformation
BEN15_RS07700	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BEN15_RS07760	COG0028	Belongs to the TPP enzyme family
BEN15_RS07765	COG3527	Alpha-acetolactate decarboxylase
BEN15_RS07790	COG1230	cation diffusion facilitator family transporter
BEN15_RS07800	COG1063	alcohol dehydrogenase
BEN15_RS07825	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BEN15_RS07845	COG1293	RNA-binding protein homologous to eukaryotic snRNP
BEN15_RS07940	COG0732	type I restriction modification DNA specificity domain
BEN15_RS07950	COG0047	phosphoribosylformylglycinamidine synthase activity
BEN15_RS07960	COG0167	dihydroorotate dehydrogenase activity
BEN15_RS07970	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEN15_RS07990	COG1337	RAMP superfamily
BEN15_RS07995	COG1567	CRISPR-associated RAMP protein, Csm4 family
BEN15_RS08010	COG0284	orotidine-5'-phosphate decarboxylase activity
BEN15_RS08025	COG3104	oligopeptide transport
BEN15_RS08055	COG0737	Belongs to the 5'-nucleotidase family
BEN15_RS08080	COG1115	amino acid carrier protein
BEN15_RS08090	COG2873	o-acetylhomoserine
BEN15_RS08125	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BEN15_RS08130	COG0196	riboflavin kinase activity
BEN15_RS08135	COG1393	Belongs to the ArsC family
BEN15_RS08145	COG0483	inositol monophosphate 1-phosphatase activity
BEN15_RS08150	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
BEN15_RS08150	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BEN15_RS08160	COG0573	inorganic phosphate transmembrane transporter activity
BEN15_RS08165	COG0581	inorganic phosphate transmembrane transporter activity
BEN15_RS08180	COG0704	Plays a role in the regulation of phosphate uptake
BEN15_RS08195	COG0095	Lipoate-protein ligase
BEN15_RS08210	COG0058	SHG alpha-glucan phosphorylase activity
BEN15_RS08215	COG1640	4-alpha-glucanotransferase
BEN15_RS08235	COG3842	ATPase activity
BEN15_RS08240	COG4607	ABC-type enterochelin transport system periplasmic component
BEN15_RS08245	COG4604	ABC transporter, ATP-binding protein
BEN15_RS08250	COG4605	iron ion homeostasis
BEN15_RS08255	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEN15_RS08275	COG1523	belongs to the glycosyl hydrolase 13 family
BEN15_RS08290	COG2184	nucleotidyltransferase activity
BEN15_RS08370	COG0508	dehydrogenase complex catalyzes the overall conversion of
BEN15_RS08375	COG0508	dehydrogenase complex catalyzes the overall conversion of
BEN15_RS08375	COG0022	dehydrogenase e1 component
BEN15_RS08380	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BEN15_RS08415	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BEN15_RS08425	COG4667	esterase of the alpha-beta hydrolase superfamily
BEN15_RS08455	COG2723	6-phospho-beta-galactosidase activity
BEN15_RS08470	COG0628	permease
BEN15_RS08500	COG0562	UDP-galactopyranose mutase
BEN15_RS08510	COG2244	polysaccharide biosynthetic process
BEN15_RS08515	COG1216	Glycosyl transferase, family 2
BEN15_RS08515	COG1442	glycosyl transferase family 8
BEN15_RS08520	COG0489	protein tyrosine kinase activity
BEN15_RS08530	COG1216	Glycosyl transferase, family 2
BEN15_RS08530	COG1442	glycosyl transferase family 8
BEN15_RS08575	COG1316	TRANSCRIPTIONal
BEN15_RS08595	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BEN15_RS08605	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BEN15_RS08620	COG1573	uracil-dna glycosylase
BEN15_RS08655	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BEN15_RS08680	COG0681	Belongs to the peptidase S26 family
BEN15_RS08690	COG0628	permease
BEN15_RS08705	COG1051	belongs to the nudix hydrolase family
BEN15_RS08715	COG2177	Part of the ABC transporter FtsEX involved in
BEN15_RS08720	COG2884	Cell division ATP-binding protein ftsE
BEN15_RS08725	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BEN15_RS08730	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BEN15_RS08755	COG0456	acetyltransferase
BEN15_RS08770	COG2348	transferase activity, transferring amino-acyl groups
BEN15_RS08780	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BEN15_RS08785	COG5002	protein histidine kinase activity
BEN15_RS08790	COG0745	RESPONSE REGULATOR receiver
BEN15_RS08795	COG1126	abc transporter atp-binding protein
BEN15_RS08800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BEN15_RS08805	COG0765	amino acid transport
BEN15_RS08810	COG0765	amino acid transport
BEN15_RS08835	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BEN15_RS08845	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BEN15_RS08850	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BEN15_RS08850	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BEN15_RS08860	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BEN15_RS08865	COG1956	GAF domain-containing protein
BEN15_RS08870	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BEN15_RS08905	COG0335	large ribosomal subunit rRNA binding
BEN15_RS08915	COG0038	chloride channel
BEN15_RS08925	COG0038	chloride channel
BEN15_RS08930	COG0716	FMN binding
BEN15_RS08995	COG0469	pyruvate kinase activity
BEN15_RS09045	COG0167	dihydroorotate dehydrogenase activity
BEN15_RS09055	COG0776	regulation of translation
BEN15_RS09065	COG2755	lipolytic protein G-D-S-L family
BEN15_RS09070	COG1307	EDD domain protein, DegV family
BEN15_RS09075	COG0497	DNA recombination
BEN15_RS09080	COG1438	arginine binding
BEN15_RS09085	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BEN15_RS09110	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BEN15_RS09130	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BEN15_RS09130	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BEN15_RS09135	COG0300	oxidoreductase activity
BEN15_RS09150	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BEN15_RS09155	COG0772	Belongs to the SEDS family
BEN15_RS09170	COG0107	imidazoleglycerol-phosphate synthase activity
BEN15_RS09180	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BEN15_RS09190	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BEN15_RS09260	COG0647	UMP catabolic process
BEN15_RS09270	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BEN15_RS09290	COG1088	dTDP-glucose 4,6-dehydratase activity
BEN15_RS09300	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BEN15_RS09305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BEN15_RS09320	COG2384	SAM-dependent methyltransferase
BEN15_RS09345	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BEN15_RS09350	COG3442	glutamine amidotransferase
BEN15_RS09355	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BEN15_RS09355	COG0392	lysyltransferase activity
BEN15_RS09370	COG0488	(ABC) transporter
BEN15_RS09380	COG0513	Belongs to the DEAD box helicase family
BEN15_RS09410	COG0372	Belongs to the citrate synthase family
BEN15_RS09415	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BEN15_RS09420	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BEN15_RS09425	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BEN15_RS09430	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BEN15_RS09450	COG0346	lactoylglutathione lyase activity
BEN15_RS09455	COG3764	Sortase (surface protein transpeptidase)
BEN15_RS09475	COG0488	(ABC) transporter
BEN15_RS09505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BEN15_RS09510	COG1328	CTP reductase activity
BEN15_RS09510	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BEN15_RS09540	COG1196	nuclear chromosome segregation
BEN15_RS09555	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BEN15_RS09570	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BEN15_RS09580	COG1011	Hydrolase
BEN15_RS09585	COG1268	BioY protein
BEN15_RS09595	COG0517	IMP dehydrogenase activity
BEN15_RS09595	COG1125	glycine betaine transport
BEN15_RS09610	COG2986	histidine ammonia-lyase
BEN15_RS09620	COG2986	histidine ammonia-lyase
BEN15_RS09630	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BEN15_RS09640	COG1131	(ABC) transporter
BEN15_RS09690	COG1131	(ABC) transporter
BEN15_RS09710	COG0577	efflux transmembrane transporter activity
BEN15_RS09715	COG1136	(ABC) transporter
BEN15_RS09720	COG2198	Histidine kinase
BEN15_RS09720	COG0784	Response regulator, receiver
BEN15_RS09720	COG5002	protein histidine kinase activity
BEN15_RS09725	COG0745	RESPONSE REGULATOR receiver
BEN15_RS09740	COG0534	Mate efflux family protein
BEN15_RS09745	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEN15_RS09745	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEN15_RS09760	COG1126	abc transporter atp-binding protein
BEN15_RS09765	COG0765	amino acid transport
BEN15_RS09775	COG2079	MmgE PrpD family protein
BEN15_RS09790	COG0371	Dehydrogenase
BEN15_RS09800	COG1473	amidohydrolase
BEN15_RS09810	COG1482	cell wall glycoprotein biosynthetic process
BEN15_RS09815	COG1482	cell wall glycoprotein biosynthetic process
BEN15_RS09825	COG0531	amino acid
BEN15_RS09835	COG2514	catechol 2,3-dioxygenase activity
BEN15_RS09840	COG1959	2 iron, 2 sulfur cluster binding
BEN15_RS09850	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BEN15_RS09855	COG0778	Nitroreductase
BEN15_RS09865	COG0656	L-ascorbic acid biosynthetic process
BEN15_RS09905	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEN15_RS09935	COG1280	lysine exporter protein (LysE YggA)
BEN15_RS09945	COG1216	Glycosyl transferase, family 2
BEN15_RS09945	COG1442	glycosyl transferase family 8
BEN15_RS09970	COG1396	sequence-specific DNA binding
BEN15_RS09975	COG0419	ATPase involved in DNA repair
BEN15_RS09980	COG0420	3'-5' exonuclease activity
BEN15_RS09985	COG3250	beta-galactosidase activity