AMD33_RS00040	SM01323	AMD33_RS00040
AMD33_RS00070	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00075	SM00883	Chaperonin 10 Kd subunit
AMD33_RS00140	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AMD33_RS00140	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AMD33_RS00145	SM00014	Acid phosphatase homologues
AMD33_RS00170	SM00347	helix_turn_helix multiple antibiotic resistance protein
AMD33_RS00235	SM00981	AMD33_RS00235
AMD33_RS00245	SM00487	DEAD-like helicases superfamily
AMD33_RS00245	SM00490	helicase superfamily c-terminal domain
AMD33_RS00295	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AMD33_RS00350	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMD33_RS00370	SM00363	S4 RNA-binding domain
AMD33_RS00375	SM01234	AMD33_RS00375
AMD33_RS00400	SM00014	Acid phosphatase homologues
AMD33_RS00405	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS00465	SM00988	UreE urease accessory protein, N-terminal domain
AMD33_RS00495	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00500	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS00525	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS00540	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00540	SM00930	AMD33_RS00540
AMD33_RS00565	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00575	SM00861	Transketolase, pyrimidine binding domain
AMD33_RS00600	SM00448	cheY-homologous receiver domain
AMD33_RS00600	SM00862	Transcriptional regulatory protein, C terminal
AMD33_RS00605	SM00387	Histidine kinase-like ATPases
AMD33_RS00605	SM00388	His Kinase A (phosphoacceptor) domain
AMD33_RS00710	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS00710	SM00322	K homology RNA-binding domain
AMD33_RS00815	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00820	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS00825	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMD33_RS00845	SM00487	DEAD-like helicases superfamily
AMD33_RS00845	SM00490	helicase superfamily c-terminal domain
AMD33_RS00910	SM01131	AMD33_RS00910
AMD33_RS00960	SM00347	helix_turn_helix multiple antibiotic resistance protein
AMD33_RS00980	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AMD33_RS00985	SM00822	AMD33_RS00985
AMD33_RS00990	SM00825	Beta-ketoacyl synthase
AMD33_RS01005	SM00878	Biotin carboxylase C-terminal domain
AMD33_RS01045	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01055	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS01070	SM00322	K homology RNA-binding domain
AMD33_RS01070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMD33_RS01080	SM00420	helix_turn_helix, Deoxyribose operon repressor
AMD33_RS01080	SM01134	AMD33_RS01080
AMD33_RS01115	SM00981	AMD33_RS01115
AMD33_RS01175	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01195	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AMD33_RS01205	SM00347	helix_turn_helix multiple antibiotic resistance protein
AMD33_RS01210	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01215	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01250	SM00257	Lysin motif
AMD33_RS01315	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AMD33_RS01330	SM00287	Bacterial SH3 domain homologues
AMD33_RS01345	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AMD33_RS01445	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01500	SM00938	Nitrogen regulatory protein P-II
AMD33_RS01505	SM00047	Lysozyme subfamily 2
AMD33_RS01625	SM00363	S4 RNA-binding domain
AMD33_RS01645	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AMD33_RS01650	SM00851	MGS-like domain
AMD33_RS01650	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AMD33_RS01650	SM01209	AMD33_RS01650
AMD33_RS01685	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01690	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01720	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01730	SM00450	Rhodanese Homology Domain
AMD33_RS01735	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS01755	SM00363	S4 RNA-binding domain
AMD33_RS01850	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AMD33_RS01900	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS01900	SM00994	ClpX C4-type zinc finger
AMD33_RS01900	SM01086	C-terminal, D2-small domain, of ClpB protein
AMD33_RS01930	SM01207	AMD33_RS01930
AMD33_RS01935	SM00387	Histidine kinase-like ATPases
AMD33_RS01935	SM00433	TopoisomeraseII
AMD33_RS01940	SM00434	DNA Topoisomerase IV
AMD33_RS01965	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS02015	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS02015	SM01086	C-terminal, D2-small domain, of ClpB protein
AMD33_RS02035	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS02040	SM00899	AMD33_RS02040
AMD33_RS02085	SM00493	AMD33_RS02085
AMD33_RS02115	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AMD33_RS02115	SM01232	AMD33_RS02115
AMD33_RS02135	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS02135	SM00955	AMD33_RS02135
AMD33_RS02150	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS02160	SM00354	helix_turn _helix lactose operon repressor
AMD33_RS02180	SM01192	AMD33_RS02180
AMD33_RS02180	SM01193	AMD33_RS02180
AMD33_RS02330	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS02330	SM00732	Likely ribonuclease with RNase H fold.
AMD33_RS02335	SM00731	SprT homologues.
AMD33_RS02415	SM00927	DNA mismatch repair enzyme MutH
AMD33_RS02435	SM00257	Lysin motif
AMD33_RS02450	SM00855	Phosphoglycerate mutase family
AMD33_RS02490	SM00487	DEAD-like helicases superfamily
AMD33_RS02515	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS02600	SM00838	Elongation factor G C-terminus
AMD33_RS02625	SM00842	Cell division protein FtsA
AMD33_RS02630	SM00864	Tubulin/FtsZ family, GTPase domain
AMD33_RS02630	SM00865	Tubulin/FtsZ family, C-terminal domain
AMD33_RS02650	SM00363	S4 RNA-binding domain
AMD33_RS02710	SM00937	AMD33_RS02710
AMD33_RS02740	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS02745	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS02835	SM00942	Primase C terminal 1 (PriCT-1)
AMD33_RS02865	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS02870	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS02955	SM00892	DNA/RNA non-specific endonuclease
AMD33_RS02970	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS02975	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS02980	SM00448	cheY-homologous receiver domain
AMD33_RS02980	SM00862	Transcriptional regulatory protein, C terminal
AMD33_RS02985	SM00091	PAS domain
AMD33_RS02985	SM00387	Histidine kinase-like ATPases
AMD33_RS02985	SM00388	His Kinase A (phosphoacceptor) domain
AMD33_RS02990	SM00849	Metallo-beta-lactamase superfamily
AMD33_RS03020	SM00831	Cation transporter/ATPase, N-terminus
AMD33_RS03040	SM00937	AMD33_RS03040
AMD33_RS03045	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS03065	SM00028	Tetratricopeptide repeats
AMD33_RS03110	SM01321	AMD33_RS03110
AMD33_RS03135	SM00986	Uracil DNA glycosylase superfamily
AMD33_RS03135	SM00987	UreE urease accessory protein, C-terminal domain 
AMD33_RS03420	SM00986	Uracil DNA glycosylase superfamily
AMD33_RS03420	SM00987	UreE urease accessory protein, C-terminal domain 
AMD33_RS03455	SM00861	Transketolase, pyrimidine binding domain
AMD33_RS03590	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS03595	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS03635	SM00904	Riboflavin kinase
AMD33_RS03725	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS03750	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AMD33_RS03950	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMD33_RS03960	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS03965	SM00838	Elongation factor G C-terminus
AMD33_RS03975	SM00450	Rhodanese Homology Domain
AMD33_RS03980	SM00562	AMD33_RS03980
AMD33_RS03995	SM00387	Histidine kinase-like ATPases
AMD33_RS03995	SM00388	His Kinase A (phosphoacceptor) domain
AMD33_RS04000	SM00448	cheY-homologous receiver domain
AMD33_RS04000	SM00862	Transcriptional regulatory protein, C terminal
AMD33_RS04010	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AMD33_RS04010	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AMD33_RS04010	SM00493	AMD33_RS04010
AMD33_RS04035	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS04050	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS04050	SM00962	SRP54-type protein, GTPase domain
AMD33_RS04050	SM00963	SRP54-type protein, helical bundle domain
AMD33_RS04060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AMD33_RS04060	SM00866	AMD33_RS04060
AMD33_RS04090	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS04095	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS04125	SM00047	Lysozyme subfamily 2
AMD33_RS04220	SM00357	Cold shock protein domain
AMD33_RS04225	SM00357	Cold shock protein domain
AMD33_RS04325	SM00479	AMD33_RS04325
AMD33_RS04325	SM00487	DEAD-like helicases superfamily
AMD33_RS04325	SM00491	AMD33_RS04325
AMD33_RS04330	SM00849	Metallo-beta-lactamase superfamily
AMD33_RS04345	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS04445	SM00387	Histidine kinase-like ATPases
AMD33_RS04520	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS04550	SM00830	Chorismate mutase type II
AMD33_RS04585	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS04675	SM01329	AMD33_RS04675
AMD33_RS04680	SM00917	LeuA allosteric (dimerisation) domain
AMD33_RS04685	SM00855	Phosphoglycerate mutase family
AMD33_RS04700	SM00411	bacterial (prokaryotic) histone like domain
AMD33_RS04730	SM00363	S4 RNA-binding domain
AMD33_RS04755	SM00478	endonuclease III
AMD33_RS04755	SM00525	AMD33_RS04755
AMD33_RS04910	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMD33_RS05025	SM00487	DEAD-like helicases superfamily
AMD33_RS05025	SM00490	helicase superfamily c-terminal domain
AMD33_RS05055	SM01329	AMD33_RS05055
AMD33_RS05115	SM00434	DNA Topoisomerase IV
AMD33_RS05130	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AMD33_RS05180	SM00873	B3/4 domain
AMD33_RS05180	SM00874	tRNA synthetase B5 domain
AMD33_RS05180	SM00896	Ferredoxin-fold anticodon binding domain
AMD33_RS05200	SM00968	SMC proteins Flexible Hinge Domain
AMD33_RS05205	SM00358	Double-stranded RNA binding motif
AMD33_RS05205	SM00535	Ribonuclease III family
AMD33_RS05210	SM01130	AMD33_RS05210
AMD33_RS05215	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AMD33_RS05235	SM00155	Phospholipase D. Active site motifs.
AMD33_RS05240	SM00465	GIY-YIG type nucleases (URI domain)
AMD33_RS05255	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05325	SM00421	helix_turn_helix, Lux Regulon
AMD33_RS05325	SM00448	cheY-homologous receiver domain
AMD33_RS05340	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05370	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05400	SM00387	Histidine kinase-like ATPases
AMD33_RS05405	SM00448	cheY-homologous receiver domain
AMD33_RS05405	SM00862	Transcriptional regulatory protein, C terminal
AMD33_RS05520	SM00448	cheY-homologous receiver domain
AMD33_RS05580	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05615	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMD33_RS05620	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS05650	SM01038	Beta galactosidase small chain
AMD33_RS05680	SM00354	helix_turn _helix lactose operon repressor
AMD33_RS05725	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05725	SM00843	AMD33_RS05725
AMD33_RS05755	SM00421	helix_turn_helix, Lux Regulon
AMD33_RS05755	SM00448	cheY-homologous receiver domain
AMD33_RS05760	SM00387	Histidine kinase-like ATPases
AMD33_RS05770	SM00220	Serine/Threonine protein kinases, catalytic domain
AMD33_RS05770	SM00740	AMD33_RS05770
AMD33_RS05775	SM00331	Sigma factor PP2C-like phosphatases
AMD33_RS05775	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AMD33_RS05790	SM00487	DEAD-like helicases superfamily
AMD33_RS05790	SM00490	helicase superfamily c-terminal domain
AMD33_RS05795	SM01409	AMD33_RS05795
AMD33_RS05800	SM00072	Guanylate kinase homologues.
AMD33_RS05805	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05805	SM00962	SRP54-type protein, GTPase domain
AMD33_RS05805	SM00963	SRP54-type protein, helical bundle domain
AMD33_RS05820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AMD33_RS05825	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05840	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS05915	SM00954	Region found in RelA / SpoT proteins
AMD33_RS05920	SM01118	AMD33_RS05920
AMD33_RS05925	SM01400	AMD33_RS05925
AMD33_RS05940	SM00881	CoA binding domain
AMD33_RS05965	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06035	SM00400	zinc finger
AMD33_RS06035	SM00493	AMD33_RS06035
AMD33_RS06050	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS06050	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AMD33_RS06060	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS06060	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AMD33_RS06065	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS06065	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AMD33_RS06075	SM00487	DEAD-like helicases superfamily
AMD33_RS06075	SM00490	helicase superfamily c-terminal domain
AMD33_RS06095	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS06095	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AMD33_RS06100	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06115	SM00363	S4 RNA-binding domain
AMD33_RS06185	SM00387	Histidine kinase-like ATPases
AMD33_RS06185	SM00433	TopoisomeraseII
AMD33_RS06270	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06285	SM00905	Dihydroneopterin aldolase
AMD33_RS06290	SM00642	Alpha-amylase domain
AMD33_RS06350	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AMD33_RS06355	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AMD33_RS06355	SM00292	breast cancer carboxy-terminal domain
AMD33_RS06355	SM00532	Ligase N family
AMD33_RS06375	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMD33_RS06390	SM00849	Metallo-beta-lactamase superfamily
AMD33_RS06395	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AMD33_RS06400	SM00563	Phosphate acyltransferases
AMD33_RS06420	SM00487	DEAD-like helicases superfamily
AMD33_RS06420	SM00490	helicase superfamily c-terminal domain
AMD33_RS06440	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS06475	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS06475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AMD33_RS06480	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06550	SM00830	Chorismate mutase type II
AMD33_RS06580	SM00422	helix_turn_helix, mercury resistance
AMD33_RS06585	SM00479	AMD33_RS06585
AMD33_RS06630	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06655	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06655	SM01086	C-terminal, D2-small domain, of ClpB protein
AMD33_RS06675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMD33_RS06685	SM01103	AMD33_RS06685
AMD33_RS06710	SM00845	GatB domain
AMD33_RS06780	SM01091	Transporter associated domain
AMD33_RS06785	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06805	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMD33_RS06835	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06865	SM01057	Eukaryotic-type carbonic anhydrase
AMD33_RS06895	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS06920	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
AMD33_RS06920	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
AMD33_RS06980	SM00850	LytTr DNA-binding domain
AMD33_RS07000	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07005	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07010	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07040	SM00487	DEAD-like helicases superfamily
AMD33_RS07040	SM00490	helicase superfamily c-terminal domain
AMD33_RS07050	SM00740	AMD33_RS07050
AMD33_RS07100	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07125	SM00850	LytTr DNA-binding domain
AMD33_RS07150	SM00870	AMD33_RS07150
AMD33_RS07155	SM00487	DEAD-like helicases superfamily
AMD33_RS07155	SM00490	helicase superfamily c-terminal domain
AMD33_RS07160	SM01005	Alanine racemase, C-terminal domain
AMD33_RS07180	SM00957	SecA DEAD-like domain
AMD33_RS07180	SM00958	SecA preprotein cross-linking domain
AMD33_RS07205	SM00640	Glycosyl hydrolases family 32
AMD33_RS07210	SM00354	helix_turn _helix lactose operon repressor
AMD33_RS07225	SM00841	Elongation factor P, C-terminal
AMD33_RS07225	SM01185	AMD33_RS07225
AMD33_RS07265	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07305	SM00478	endonuclease III
AMD33_RS07325	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AMD33_RS07325	SM00474	3'-5' exonuclease
AMD33_RS07325	SM00475	5'-3' exonuclease
AMD33_RS07325	SM00482	DNA polymerase A domain
AMD33_RS07330	SM00463	Small MutS-related domain
AMD33_RS07330	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AMD33_RS07330	SM00534	ATPase domain of DNA mismatch repair MUTS family
AMD33_RS07355	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07390	SM00849	Metallo-beta-lactamase superfamily
AMD33_RS07400	SM01230	AMD33_RS07400
AMD33_RS07405	SM00422	helix_turn_helix, mercury resistance
AMD33_RS07430	SM01321	AMD33_RS07430
AMD33_RS07455	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AMD33_RS07460	SM00838	Elongation factor G C-terminus
AMD33_RS07460	SM00889	Elongation factor G, domain IV
AMD33_RS07495	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
AMD33_RS07515	SM00650	Ribosomal RNA adenine dimethylases
AMD33_RS07520	SM00493	AMD33_RS07520
AMD33_RS07530	SM00881	CoA binding domain
AMD33_RS07540	SM00506	Appr-1"-p processing enzyme
AMD33_RS07580	SM01321	AMD33_RS07580
AMD33_RS07590	SM00393	Putative single-stranded nucleic acids-binding domain
AMD33_RS07590	SM01245	AMD33_RS07590
AMD33_RS07635	SM00649	Ribosomal protein L11/L12
AMD33_RS07645	SM00947	Carbonic anhydrase
AMD33_RS07660	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS07810	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS07865	SM00663	RNA polymerase I subunit A N-terminus
AMD33_RS07885	SM00363	S4 RNA-binding domain
AMD33_RS07985	SM00866	AMD33_RS07985
AMD33_RS08075	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS08125	SM00662	RNA polymerases D
AMD33_RS08140	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS08200	SM01374	AMD33_RS08200
AMD33_RS08220	SM00322	K homology RNA-binding domain
AMD33_RS08235	SM01382	AMD33_RS08235
AMD33_RS08235	SM01383	AMD33_RS08235
AMD33_RS08255	SM01403	AMD33_RS08255
AMD33_RS08260	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08270	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
AMD33_RS08275	SM00226	Low molecular weight phosphatase family
AMD33_RS08280	SM00788	Adenylosuccinate synthetase
AMD33_RS08305	SM00530	Helix-turn-helix XRE-family like proteins 
AMD33_RS08310	SM00220	Serine/Threonine protein kinases, catalytic domain
AMD33_RS08315	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08330	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08355	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08370	SM00732	Likely ribonuclease with RNase H fold.
AMD33_RS08515	SM00363	S4 RNA-binding domain
AMD33_RS08515	SM01390	AMD33_RS08515
AMD33_RS08540	SM01228	AMD33_RS08540
AMD33_RS08565	SM00257	Lysin motif
AMD33_RS08575	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08580	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08615	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMD33_RS08615	SM01240	AMD33_RS08615
AMD33_RS08630	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08665	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AMD33_RS08670	SM00470	ParB-like nuclease domain
AMD33_RS08675	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08675	SM00760	Bacterial dnaA protein helix-turn-helix domain
AMD33_RS08680	SM00480	DNA polymerase III beta subunit
AMD33_RS08700	SM00487	DEAD-like helicases superfamily
AMD33_RS08700	SM00490	helicase superfamily c-terminal domain
AMD33_RS08700	SM00982	AMD33_RS08700
AMD33_RS08700	SM01058	CarD-like/TRCF domain
AMD33_RS08705	SM00363	S4 RNA-binding domain
AMD33_RS08725	SM00977	TilS substrate C-terminal domain
AMD33_RS08735	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS08890	SM01400	AMD33_RS08890
AMD33_RS08925	SM01211	AMD33_RS08925
AMD33_RS08945	SM00798	AICARFT/IMPCHase bienzyme
AMD33_RS08945	SM00851	MGS-like domain
AMD33_RS08970	SM01209	AMD33_RS08970
AMD33_RS08970	SM01210	AMD33_RS08970
AMD33_RS08975	SM01001	AIR carboxylase
AMD33_RS08995	SM00998	Adenylosuccinate lyase C-terminus
AMD33_RS09000	SM00836	DALR anticodon binding domain
AMD33_RS09000	SM01016	Arginyl tRNA synthetase N terminal dom
AMD33_RS09015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AMD33_RS09015	SM00534	ATPase domain of DNA mismatch repair MUTS family
AMD33_RS09025	SM00850	LytTr DNA-binding domain
AMD33_RS09035	SM00853	MutL C terminal dimerisation domain
AMD33_RS09035	SM01340	AMD33_RS09035
AMD33_RS09045	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AMD33_RS09055	SM00852	Probable molybdopterin binding domain
AMD33_RS09060	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS09150	SM00479	AMD33_RS09150
AMD33_RS09150	SM00481	DNA polymerase alpha chain like domain
AMD33_RS09165	SM00347	helix_turn_helix multiple antibiotic resistance protein
AMD33_RS09215	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS09215	SM01086	C-terminal, D2-small domain, of ClpB protein
AMD33_RS09225	SM00936	Penicillin-binding protein 5, C-terminal domain 
AMD33_RS09230	SM00316	Ribosomal protein S1-like RNA-binding domain
AMD33_RS09230	SM00322	K homology RNA-binding domain
AMD33_RS09245	SM00840	AMD33_RS09245
AMD33_RS09265	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AMD33_RS09320	SM01260	AMD33_RS09320
AMD33_RS09360	SM00854	Bacterial capsule synthesis protein PGA_cap
AMD33_RS09375	SM00855	Phosphoglycerate mutase family
AMD33_RS09385	SM00047	Lysozyme subfamily 2
AMD33_RS09405	SM00271	DnaJ molecular chaperone homology domain
AMD33_RS09615	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AMD33_RS09615	SM00954	Region found in RelA / SpoT proteins
AMD33_RS09650	SM00100	Cyclic nucleotide-monophosphate binding domain
AMD33_RS09660	SM01387	AMD33_RS09660
AMD33_RS09670	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS09675	SM00062	Bacterial periplasmic substrate-binding proteins
AMD33_RS09695	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS09780	SM00347	helix_turn_helix multiple antibiotic resistance protein
AMD33_RS09785	SM00382	ATPases associated with a variety of cellular activities
AMD33_RS09830	SM01323	AMD33_RS09830
