locus-tag class description AMD33_RS00010 PF00367 phosphotransferase system, EIIB AMD33_RS00010 PF02378 Phosphotransferase system, EIIC AMD33_RS00010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS00020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS00020 PF00367 phosphotransferase system, EIIB AMD33_RS00020 PF02378 Phosphotransferase system, EIIC AMD33_RS00025 PF03372 Endonuclease/Exonuclease/phosphatase family AMD33_RS00030 PF00342 Phosphoglucose isomerase AMD33_RS00035 PF01709 Transcriptional regulator AMD33_RS00045 PF01255 Putative undecaprenyl diphosphate synthase AMD33_RS00055 PF02163 Peptidase family M50 AMD33_RS00055 PF13180 PDZ domain AMD33_RS00060 PF03129 Anticodon binding domain AMD33_RS00060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD33_RS00060 PF04073 Aminoacyl-tRNA editing domain AMD33_RS00065 PF02653 Branched-chain amino acid transport system / permease component AMD33_RS00070 PF00005 ABC transporter AMD33_RS00075 PF00166 Chaperonin 10 Kd subunit AMD33_RS00080 PF00118 TCP-1/cpn60 chaperonin family AMD33_RS00110 PF13276 HTH-like domain AMD33_RS00110 PF00665 Integrase core domain AMD33_RS00110 PF13333 Integrase core domain AMD33_RS00125 PF00849 RNA pseudouridylate synthase AMD33_RS00125 PF01479 S4 domain AMD33_RS00130 PF00905 Penicillin binding protein transpeptidase domain AMD33_RS00130 PF00912 Transglycosylase AMD33_RS00140 PF00467 KOW motif AMD33_RS00140 PF02357 Transcription termination factor nusG AMD33_RS00145 PF01569 PAP2 superfamily AMD33_RS00160 PF08264 Anticodon-binding domain of tRNA AMD33_RS00160 PF13603 Leucyl-tRNA synthetase, Domain 2 AMD33_RS00160 PF09334 tRNA synthetases class I (M) AMD33_RS00160 PF00133 tRNA synthetases class I (I, L, M and V) AMD33_RS00185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMD33_RS00185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMD33_RS00185 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AMD33_RS00190 PF02540 NAD synthase AMD33_RS00200 PF03051 Peptidase C1-like family AMD33_RS00205 PF01610 Transposase AMD33_RS00205 PF13683 Integrase core domain AMD33_RS00215 PF03838 Recombination protein U AMD33_RS00220 PF06908 YspA SLOG family AMD33_RS00225 PF05103 DivIVA protein AMD33_RS00235 PF01170 Putative RNA methylase family UPF0020 AMD33_RS00235 PF02926 THUMP domain AMD33_RS00240 PF18041 MapZ extracellular domain 1 AMD33_RS00240 PF18708 MapZ extracellular C-terminal domain 2 AMD33_RS00245 PF12419 SNF2 Helicase protein AMD33_RS00245 PF00271 Helicase conserved C-terminal domain AMD33_RS00245 PF00176 SNF2 family N-terminal domain AMD33_RS00255 PF08245 Mur ligase middle domain AMD33_RS00255 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS00255 PF01225 Mur ligase family, catalytic domain AMD33_RS00265 PF02618 YceG-like family AMD33_RS00270 PF03449 Transcription elongation factor, N-terminal AMD33_RS00270 PF01272 Transcription elongation factor, GreA/GreB, C-term AMD33_RS00285 PF02096 60Kd inner membrane protein AMD33_RS00290 PF00708 Acylphosphatase AMD33_RS00295 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD33_RS00295 PF00588 SpoU rRNA Methylase family AMD33_RS00305 PF01027 Inhibitor of apoptosis-promoting Bax1 AMD33_RS00320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMD33_RS00320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMD33_RS00330 PF03672 Uncharacterised protein family (UPF0154) AMD33_RS00335 PF01177 Asp/Glu/Hydantoin racemase AMD33_RS00340 PF01725 Ham1 family AMD33_RS00355 PF00589 Phage integrase family AMD33_RS00360 PF02616 Segregation and condensation protein ScpA AMD33_RS00365 PF04079 Segregation and condensation complex subunit ScpB AMD33_RS00370 PF01479 S4 domain AMD33_RS00370 PF00849 RNA pseudouridylate synthase AMD33_RS00375 PF01809 Putative membrane protein insertion efficiency factor AMD33_RS00380 PF02386 Cation transport protein AMD33_RS00385 PF02080 TrkA-C domain AMD33_RS00385 PF02254 TrkA-N domain AMD33_RS00390 PF00588 SpoU rRNA Methylase family AMD33_RS00395 PF12822 ECF transporter, substrate-specific component AMD33_RS00400 PF01569 PAP2 superfamily AMD33_RS00410 PF03412 Peptidase C39 family AMD33_RS00410 PF00005 ABC transporter AMD33_RS00410 PF00664 ABC transporter transmembrane region AMD33_RS00420 PF03412 Peptidase C39 family AMD33_RS00420 PF00005 ABC transporter AMD33_RS00420 PF00664 ABC transporter transmembrane region AMD33_RS00425 PF00005 ABC transporter AMD33_RS00425 PF03412 Peptidase C39 family AMD33_RS00425 PF00664 ABC transporter transmembrane region AMD33_RS00430 PF03412 Peptidase C39 family AMD33_RS00430 PF00005 ABC transporter AMD33_RS00430 PF00664 ABC transporter transmembrane region AMD33_RS00445 PF02293 AmiS/UreI family transporter AMD33_RS00450 PF00547 Urease, gamma subunit AMD33_RS00455 PF00699 Urease beta subunit AMD33_RS00460 PF01979 Amidohydrolase family AMD33_RS00460 PF00449 Urease alpha-subunit, N-terminal domain AMD33_RS00465 PF02814 UreE urease accessory protein, N-terminal domain AMD33_RS00465 PF05194 UreE urease accessory protein, C-terminal domain AMD33_RS00470 PF01730 UreF AMD33_RS00475 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMD33_RS00480 PF01774 UreD urease accessory protein AMD33_RS00485 PF01891 Cobalt uptake substrate-specific transmembrane region AMD33_RS00485 PF13190 PDGLE domain AMD33_RS00495 PF00005 ABC transporter AMD33_RS00500 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS00525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS00530 PF03180 NLPA lipoprotein AMD33_RS00540 PF00005 ABC transporter AMD33_RS00540 PF09383 NIL domain AMD33_RS00545 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS00550 PF00375 Sodium:dicarboxylate symporter family AMD33_RS00560 PF07155 ECF-type riboflavin transporter, S component AMD33_RS00565 PF12558 ATP-binding cassette cobalt transporter AMD33_RS00565 PF00005 ABC transporter AMD33_RS00575 PF02779 Transketolase, pyrimidine binding domain AMD33_RS00575 PF02780 Transketolase, C-terminal domain AMD33_RS00575 PF00456 Transketolase, thiamine diphosphate binding domain AMD33_RS00585 PF02386 Cation transport protein AMD33_RS00590 PF02527 rRNA small subunit methyltransferase G AMD33_RS00600 PF00072 Response regulator receiver domain AMD33_RS00600 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS00605 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS00605 PF18719 ArlS sensor domain AMD33_RS00610 PF03477 ATP cone domain AMD33_RS00620 PF07319 Primosomal protein DnaI N-terminus AMD33_RS00620 PF01695 IstB-like ATP binding protein AMD33_RS00625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMD33_RS00625 PF01926 50S ribosome-binding GTPase AMD33_RS00635 PF13333 Integrase core domain AMD33_RS00635 PF00665 Integrase core domain AMD33_RS00650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD33_RS00650 PF02403 Seryl-tRNA synthetase N-terminal domain AMD33_RS00660 PF03613 PTS system mannose/fructose/sorbose family IID component AMD33_RS00665 PF03609 PTS system sorbose-specific iic component AMD33_RS00670 PF03830 PTS system sorbose subfamily IIB component AMD33_RS00670 PF03610 PTS system fructose IIA component AMD33_RS00675 PF04199 Putative cyclase AMD33_RS00685 PF00860 Permease family AMD33_RS00690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMD33_RS00695 PF13302 Acetyltransferase (GNAT) domain AMD33_RS00700 PF03816 Cell envelope-related transcriptional attenuator domain AMD33_RS00705 PF02576 RimP N-terminal domain AMD33_RS00705 PF17384 RimP C-terminal SH3 domain AMD33_RS00710 PF00575 S1 RNA binding domain AMD33_RS00710 PF13184 NusA-like KH domain AMD33_RS00710 PF08529 NusA N-terminal domain AMD33_RS00715 PF04296 Protein of unknown function (DUF448) AMD33_RS00720 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AMD33_RS00725 PF04760 Translation initiation factor IF-2, N-terminal region AMD33_RS00725 PF11987 Translation-initiation factor 2 AMD33_RS00725 PF00009 Elongation factor Tu GTP binding domain AMD33_RS00730 PF02033 Ribosome-binding factor A AMD33_RS00735 PF03641 Possible lysine decarboxylase AMD33_RS00740 PF03641 Possible lysine decarboxylase AMD33_RS00750 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS00750 PF08245 Mur ligase middle domain AMD33_RS00760 PF00690 Cation transporter/ATPase, N-terminus AMD33_RS00760 PF00689 Cation transporting ATPase, C-terminus AMD33_RS00765 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD33_RS00770 PF00155 Aminotransferase class I and II AMD33_RS00785 PF00574 Clp protease AMD33_RS00795 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AMD33_RS00800 PF13458 Periplasmic binding protein AMD33_RS00805 PF02653 Branched-chain amino acid transport system / permease component AMD33_RS00810 PF11862 Domain of unknown function (DUF3382) AMD33_RS00810 PF02653 Branched-chain amino acid transport system / permease component AMD33_RS00815 PF00005 ABC transporter AMD33_RS00815 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMD33_RS00820 PF00005 ABC transporter AMD33_RS00825 PF00571 CBS domain AMD33_RS00835 PF00291 Pyridoxal-phosphate dependent enzyme AMD33_RS00840 PF01205 Uncharacterized protein family UPF0029 AMD33_RS00840 PF09186 Domain of unknown function (DUF1949) AMD33_RS00845 PF04851 Type III restriction enzyme, res subunit AMD33_RS00845 PF00271 Helicase conserved C-terminal domain AMD33_RS00855 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMD33_RS00855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMD33_RS00910 PF02833 DHHA2 domain AMD33_RS00910 PF01368 DHH family AMD33_RS00920 PF04167 Protein of unknown function (DUF402) AMD33_RS00925 PF02631 RecX family AMD33_RS00935 PF01938 TRAM domain AMD33_RS00935 PF05958 tRNA (Uracil-5-)-methyltransferase AMD33_RS00940 PF03590 Aspartate-ammonia ligase AMD33_RS00945 PF00696 Amino acid kinase family AMD33_RS00945 PF13840 ACT domain AMD33_RS00950 PF13419 Haloacid dehalogenase-like hydrolase AMD33_RS00955 PF00378 Enoyl-CoA hydratase/isomerase AMD33_RS00960 PF01047 MarR family AMD33_RS00965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMD33_RS00965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMD33_RS00970 PF00550 Phosphopantetheine attachment site AMD33_RS00975 PF03060 Nitronate monooxygenase AMD33_RS00980 PF00698 Acyl transferase domain AMD33_RS00990 PF00109 Beta-ketoacyl synthase, N-terminal domain AMD33_RS00990 PF02801 Beta-ketoacyl synthase, C-terminal domain AMD33_RS00995 PF00364 Biotin-requiring enzyme AMD33_RS01000 PF07977 FabA-like domain AMD33_RS01005 PF00289 Biotin carboxylase, N-terminal domain AMD33_RS01005 PF02785 Biotin carboxylase C-terminal domain AMD33_RS01005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD33_RS01010 PF01039 Carboxyl transferase domain AMD33_RS01010 PF17848 Acetyl-coA carboxylase zinc finger domain AMD33_RS01015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMD33_RS01020 PF02664 S-Ribosylhomocysteinase (LuxS) AMD33_RS01025 PF13610 DDE domain AMD33_RS01045 PF03412 Peptidase C39 family AMD33_RS01045 PF00664 ABC transporter transmembrane region AMD33_RS01045 PF00005 ABC transporter AMD33_RS01060 PF13276 HTH-like domain AMD33_RS01060 PF00665 Integrase core domain AMD33_RS01060 PF13333 Integrase core domain AMD33_RS01065 PF01527 Transposase AMD33_RS01070 PF01966 HD domain AMD33_RS01070 PF00013 KH domain AMD33_RS01070 PF12072 Domain of unknown function (DUF3552) AMD33_RS01080 PF08220 DeoR-like helix-turn-helix domain AMD33_RS01080 PF00455 DeoR C terminal sensor domain AMD33_RS01085 PF00294 pfkB family carbohydrate kinase AMD33_RS01095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD33_RS01095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS01100 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS01100 PF08245 Mur ligase middle domain AMD33_RS01110 PF00266 Aminotransferase class-V AMD33_RS01115 PF02568 Thiamine biosynthesis protein (ThiI) AMD33_RS01115 PF02926 THUMP domain AMD33_RS01120 PF00534 Glycosyl transferases group 1 AMD33_RS01140 PF00829 Ribosomal prokaryotic L21 protein AMD33_RS01145 PF01016 Ribosomal L27 protein AMD33_RS01165 PF01113 Dihydrodipicolinate reductase, N-terminus AMD33_RS01165 PF05173 Dihydrodipicolinate reductase, C-terminus AMD33_RS01170 PF01743 Poly A polymerase head domain AMD33_RS01170 PF12627 Probable RNA and SrmB- binding site of polymerase A AMD33_RS01170 PF13735 tRNA nucleotidyltransferase domain 2 putative AMD33_RS01175 PF16326 ABC transporter C-terminal domain AMD33_RS01175 PF12848 ABC transporter AMD33_RS01175 PF00005 ABC transporter AMD33_RS01195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMD33_RS01195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD33_RS01200 PF01327 Polypeptide deformylase AMD33_RS01210 PF00664 ABC transporter transmembrane region AMD33_RS01210 PF00005 ABC transporter AMD33_RS01215 PF00664 ABC transporter transmembrane region AMD33_RS01215 PF00005 ABC transporter AMD33_RS01230 PF00696 Amino acid kinase family AMD33_RS01235 PF01765 Ribosome recycling factor AMD33_RS01245 PF06855 YozE SAM-like fold AMD33_RS01260 PF02562 PhoH-like protein AMD33_RS01280 PF09334 tRNA synthetases class I (M) AMD33_RS01280 PF01588 Putative tRNA binding domain AMD33_RS01285 PF03466 LysR substrate binding domain AMD33_RS01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD33_RS01300 PF01432 Peptidase family M3 AMD33_RS01300 PF08439 Oligopeptidase F AMD33_RS01305 PF01596 O-methyltransferase AMD33_RS01310 PF13145 PPIC-type PPIASE domain AMD33_RS01315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD33_RS01315 PF01411 tRNA synthetases class II (A) AMD33_RS01315 PF02272 DHHA1 domain AMD33_RS01320 PF04650 YSIRK type signal peptide AMD33_RS01320 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AMD33_RS01320 PF17961 Bacterial Ig domain AMD33_RS01320 PF00746 LPXTG cell wall anchor motif AMD33_RS01335 PF00795 Carbon-nitrogen hydrolase AMD33_RS01340 PF00155 Aminotransferase class I and II AMD33_RS01345 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD33_RS01345 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD33_RS01350 PF01960 ArgJ family AMD33_RS01355 PF00696 Amino acid kinase family AMD33_RS01360 PF00202 Aminotransferase class-III AMD33_RS01365 PF01522 Polysaccharide deacetylase AMD33_RS01370 PF00742 Homoserine dehydrogenase AMD33_RS01370 PF03447 Homoserine dehydrogenase, NAD binding domain AMD33_RS01375 PF00288 GHMP kinases N terminal domain AMD33_RS01375 PF08544 GHMP kinases C terminal AMD33_RS01380 PF00892 EamA-like transporter family AMD33_RS01410 PF10458 Valyl tRNA synthetase tRNA binding arm AMD33_RS01410 PF08264 Anticodon-binding domain of tRNA AMD33_RS01410 PF00133 tRNA synthetases class I (I, L, M and V) AMD33_RS01415 PF00137 ATP synthase subunit C AMD33_RS01420 PF00119 ATP synthase A chain AMD33_RS01425 PF00430 ATP synthase B/B' CF(0) AMD33_RS01430 PF00213 ATP synthase delta (OSCP) subunit AMD33_RS01435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD33_RS01435 PF00306 ATP synthase alpha/beta chain, C terminal domain AMD33_RS01435 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD33_RS01440 PF00231 ATP synthase AMD33_RS01445 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMD33_RS01445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMD33_RS01450 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMD33_RS01450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMD33_RS01455 PF01098 Cell cycle protein AMD33_RS01460 PF03143 Elongation factor Tu C-terminal domain AMD33_RS01460 PF03144 Elongation factor Tu domain 2 AMD33_RS01460 PF00009 Elongation factor Tu GTP binding domain AMD33_RS01465 PF00121 Triosephosphate isomerase AMD33_RS01470 PF02223 Thymidylate kinase AMD33_RS01475 PF09115 DNA polymerase III, delta subunit, C terminal AMD33_RS01480 PF04468 PSP1 C-terminal conserved region AMD33_RS01485 PF06156 Initiation control protein YabA AMD33_RS01490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMD33_RS01495 PF00909 Ammonium Transporter Family AMD33_RS01500 PF00543 Nitrogen regulatory protein P-II AMD33_RS01505 PF01476 LysM domain AMD33_RS01505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD33_RS01525 PF01979 Amidohydrolase family AMD33_RS01545 PF02091 Glycyl-tRNA synthetase alpha subunit AMD33_RS01550 PF02092 Glycyl-tRNA synthetase beta subunit AMD33_RS01555 PF05979 Bacterial protein of unknown function (DUF896) AMD33_RS01560 PF00324 Amino acid permease AMD33_RS01570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS01570 PF00367 phosphotransferase system, EIIB AMD33_RS01570 PF02378 Phosphotransferase system, EIIC AMD33_RS01580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD33_RS01585 PF00665 Integrase core domain AMD33_RS01585 PF13333 Integrase core domain AMD33_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD33_RS01615 PF03466 LysR substrate binding domain AMD33_RS01620 PF01252 Signal peptidase (SPase) II AMD33_RS01625 PF01479 S4 domain AMD33_RS01625 PF00849 RNA pseudouridylate synthase AMD33_RS01630 PF00156 Phosphoribosyl transferase domain AMD33_RS01635 PF00860 Permease family AMD33_RS01640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD33_RS01640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD33_RS01645 PF00117 Glutamine amidotransferase class-I AMD33_RS01645 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMD33_RS01650 PF02142 MGS-like domain AMD33_RS01650 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD33_RS01650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMD33_RS01670 PF00466 Ribosomal protein L10 AMD33_RS01675 PF00542 Ribosomal protein L7/L12 C-terminal domain AMD33_RS01675 PF16320 Ribosomal protein L7/L12 dimerisation domain AMD33_RS01680 PF00872 Transposase, Mutator family AMD33_RS01685 PF00005 ABC transporter AMD33_RS01685 PF00664 ABC transporter transmembrane region AMD33_RS01690 PF00005 ABC transporter AMD33_RS01690 PF00664 ABC transporter transmembrane region AMD33_RS01695 PF02547 Queuosine biosynthesis protein AMD33_RS01700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMD33_RS01715 PF00899 ThiF family AMD33_RS01715 PF00581 Rhodanese-like domain AMD33_RS01720 PF00005 ABC transporter AMD33_RS01730 PF17773 UPF0176 acylphosphatase like domain AMD33_RS01730 PF12368 Rhodanase C-terminal AMD33_RS01730 PF00581 Rhodanese-like domain AMD33_RS01755 PF01479 S4 domain AMD33_RS01755 PF00849 RNA pseudouridylate synthase AMD33_RS01760 PF07687 Peptidase dimerisation domain AMD33_RS01760 PF01546 Peptidase family M20/M25/M40 AMD33_RS01765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD33_RS01765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD33_RS01770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMD33_RS01770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMD33_RS01775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS01775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD33_RS01785 PF00288 GHMP kinases N terminal domain AMD33_RS01785 PF08544 GHMP kinases C terminal AMD33_RS01785 PF10509 Galactokinase galactose-binding signature AMD33_RS01795 PF08544 GHMP kinases C terminal AMD33_RS01795 PF00288 GHMP kinases N terminal domain AMD33_RS01800 PF01070 FMN-dependent dehydrogenase AMD33_RS01805 PF00132 Bacterial transferase hexapeptide (six repeats) AMD33_RS01805 PF14602 Hexapeptide repeat of succinyl-transferase AMD33_RS01805 PF12804 MobA-like NTP transferase domain AMD33_RS01810 PF00293 NUDIX domain AMD33_RS01820 PF01048 Phosphorylase superfamily AMD33_RS01835 PF00534 Glycosyl transferases group 1 AMD33_RS01835 PF13439 Glycosyltransferase Family 4 AMD33_RS01840 PF13439 Glycosyltransferase Family 4 AMD33_RS01840 PF00534 Glycosyl transferases group 1 AMD33_RS01850 PF03129 Anticodon binding domain AMD33_RS01850 PF02824 TGS domain AMD33_RS01850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMD33_RS01850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD33_RS01870 PF03006 Haemolysin-III related AMD33_RS01880 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AMD33_RS01885 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AMD33_RS01885 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AMD33_RS01890 PF00303 Thymidylate synthase AMD33_RS01895 PF00186 Dihydrofolate reductase AMD33_RS01900 PF06689 ClpX C4-type zinc finger AMD33_RS01900 PF10431 C-terminal, D2-small domain, of ClpB protein AMD33_RS01900 PF07724 AAA domain (Cdc48 subfamily) AMD33_RS01905 PF01926 50S ribosome-binding GTPase AMD33_RS01910 PF00324 Amino acid permease AMD33_RS01915 PF02574 Homocysteine S-methyltransferase AMD33_RS01930 PF02660 Glycerol-3-phosphate acyltransferase AMD33_RS01935 PF01751 Toprim domain AMD33_RS01935 PF00204 DNA gyrase B AMD33_RS01935 PF00986 DNA gyrase B subunit, carboxyl terminus AMD33_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS01940 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD33_RS01940 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD33_RS01945 PF01063 Amino-transferase class IV AMD33_RS01965 PF00575 S1 RNA binding domain AMD33_RS01995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMD33_RS01995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMD33_RS02010 PF00293 NUDIX domain AMD33_RS02015 PF10431 C-terminal, D2-small domain, of ClpB protein AMD33_RS02015 PF17871 AAA lid domain AMD33_RS02015 PF07724 AAA domain (Cdc48 subfamily) AMD33_RS02015 PF00004 ATPase family associated with various cellular activities (AAA) AMD33_RS02020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMD33_RS02020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMD33_RS02025 PF08796 Protein of unknown function (DUF1797) AMD33_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS02035 PF00005 ABC transporter AMD33_RS02045 PF02421 Ferrous iron transport protein B AMD33_RS02045 PF07670 Nucleoside recognition AMD33_RS02045 PF17910 FeoB cytosolic helical domain AMD33_RS02045 PF07664 Ferrous iron transport protein B C terminus AMD33_RS02070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMD33_RS02070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMD33_RS02075 PF01256 Carbohydrate kinase AMD33_RS02080 PF03717 Penicillin-binding Protein dimerisation domain AMD33_RS02080 PF00905 Penicillin binding protein transpeptidase domain AMD33_RS02085 PF13662 Toprim domain AMD33_RS02085 PF02132 RecR protein AMD33_RS02095 PF00874 PRD domain AMD33_RS02095 PF03123 CAT RNA binding domain AMD33_RS02100 PF02130 Uncharacterized protein family UPF0054 AMD33_RS02105 PF01219 Prokaryotic diacylglycerol kinase AMD33_RS02110 PF01926 50S ribosome-binding GTPase AMD33_RS02110 PF07650 KH domain AMD33_RS02115 PF06827 Zinc finger found in FPG and IleRS AMD33_RS02115 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD33_RS02115 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMD33_RS02120 PF01121 Dephospho-CoA kinase AMD33_RS02125 PF00083 Sugar (and other) transporter AMD33_RS02125 PF07690 Major Facilitator Superfamily AMD33_RS02135 PF00575 S1 RNA binding domain AMD33_RS02135 PF08206 Ribonuclease B OB domain AMD33_RS02135 PF17876 Cold shock domain AMD33_RS02135 PF00773 RNB domain AMD33_RS02140 PF01668 SmpB protein AMD33_RS02145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMD33_RS02150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD33_RS02150 PF00013 KH domain AMD33_RS02150 PF00575 S1 RNA binding domain AMD33_RS02150 PF01138 3' exoribonuclease family, domain 1 AMD33_RS02150 PF03725 3' exoribonuclease family, domain 2 AMD33_RS02155 PF01321 Creatinase/Prolidase N-terminal domain AMD33_RS02155 PF00557 Metallopeptidase family M24 AMD33_RS02160 PF00356 Bacterial regulatory proteins, lacI family AMD33_RS02180 PF03952 Enolase, N-terminal domain AMD33_RS02180 PF00113 Enolase, C-terminal TIM barrel domain AMD33_RS02195 PF17785 PUA-like domain AMD33_RS02195 PF10672 S-adenosylmethionine-dependent methyltransferase AMD33_RS02200 PF01487 Type I 3-dehydroquinase AMD33_RS02205 PF08501 Shikimate dehydrogenase substrate binding domain AMD33_RS02205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMD33_RS02210 PF01761 3-dehydroquinate synthase AMD33_RS02215 PF01264 Chorismate synthase AMD33_RS02220 PF02153 Prephenate dehydrogenase AMD33_RS02225 PF06133 Control of competence regulator ComK, YlbF/YmcA AMD33_RS02230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD33_RS02230 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD33_RS02235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD33_RS02240 PF01202 Shikimate kinase AMD33_RS02245 PF00800 Prephenate dehydratase AMD33_RS02250 PF03816 Cell envelope-related transcriptional attenuator domain AMD33_RS02270 PF05958 tRNA (Uracil-5-)-methyltransferase AMD33_RS02270 PF01938 TRAM domain AMD33_RS02285 PF02086 D12 class N6 adenine-specific DNA methyltransferase AMD33_RS02300 PF18061 CRISPR-Cas9 WED domain AMD33_RS02300 PF18070 CRISPR-Cas9 PI domain AMD33_RS02300 PF18470 Cas9 alpha-helical lobe domain AMD33_RS02300 PF18541 RuvC endonuclease subdomain 3 AMD33_RS02300 PF13395 HNH endonuclease AMD33_RS02305 PF01867 CRISPR associated protein Cas1 AMD33_RS02310 PF09827 CRISPR associated protein Cas2 AMD33_RS02320 PF09323 Domain of unknown function (DUF1980) AMD33_RS02325 PF03773 Predicted permease AMD33_RS02330 PF17674 HHH domain AMD33_RS02330 PF00575 S1 RNA binding domain AMD33_RS02330 PF09371 Tex-like protein N-terminal domain AMD33_RS02330 PF16921 Tex protein YqgF-like domain AMD33_RS02335 PF17283 SprT-like zinc ribbon domain AMD33_RS02335 PF10263 SprT-like family AMD33_RS02345 PF02603 HPr Serine kinase N terminus AMD33_RS02345 PF07475 HPr Serine kinase C-terminal domain AMD33_RS02350 PF01790 Prolipoprotein diacylglyceryl transferase AMD33_RS02375 PF01136 Peptidase family U32 AMD33_RS02375 PF16325 Peptidase family U32 C-terminal domain AMD33_RS02385 PF02632 BioY family AMD33_RS02395 PF02229 Transcriptional Coactivator p15 (PC4) AMD33_RS02400 PF01566 Natural resistance-associated macrophage protein AMD33_RS02410 PF00145 C-5 cytosine-specific DNA methylase AMD33_RS02415 PF02976 DNA mismatch repair enzyme MutH AMD33_RS02430 PF00152 tRNA synthetases class II (D, K and N) AMD33_RS02430 PF01336 OB-fold nucleic acid binding domain AMD33_RS02435 PF01476 LysM domain AMD33_RS02435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD33_RS02450 PF00300 Histidine phosphatase superfamily (branch 1) AMD33_RS02455 PF04073 Aminoacyl-tRNA editing domain AMD33_RS02490 PF18766 SWI2/SNF2 ATPase AMD33_RS02490 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMD33_RS02490 PF12008 Type I restriction and modification enzyme - subunit R C terminal AMD33_RS02510 PF05973 Phage derived protein Gp49-like (DUF891) AMD33_RS02515 PF01381 Helix-turn-helix AMD33_RS02520 PF12161 HsdM N-terminal domain AMD33_RS02520 PF02384 N-6 DNA Methylase AMD33_RS02535 PF04011 LemA family AMD33_RS02540 PF01435 Peptidase family M48 AMD33_RS02555 PF00311 Phosphoenolpyruvate carboxylase AMD33_RS02565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMD33_RS02565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMD33_RS02580 PF00210 Ferritin-like domain AMD33_RS02585 PF01475 Ferric uptake regulator family AMD33_RS02590 PF06014 Bacterial protein of unknown function (DUF910) AMD33_RS02595 PF00480 ROK family AMD33_RS02600 PF00009 Elongation factor Tu GTP binding domain AMD33_RS02600 PF03144 Elongation factor Tu domain 2 AMD33_RS02600 PF14492 Elongation Factor G, domain II AMD33_RS02600 PF00679 Elongation factor G C-terminus AMD33_RS02610 PF08245 Mur ligase middle domain AMD33_RS02610 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS02615 PF03033 Glycosyltransferase family 28 N-terminal domain AMD33_RS02615 PF04101 Glycosyltransferase family 28 C-terminal domain AMD33_RS02620 PF08478 POTRA domain, FtsQ-type AMD33_RS02625 PF02491 SHS2 domain inserted in FTSA AMD33_RS02625 PF11983 Membrane-attachment and polymerisation-promoting switch AMD33_RS02630 PF12327 FtsZ family, C-terminal domain AMD33_RS02630 PF00091 Tubulin/FtsZ family, GTPase domain AMD33_RS02640 PF04472 Cell division protein SepF AMD33_RS02655 PF05103 DivIVA protein AMD33_RS02660 PF08264 Anticodon-binding domain of tRNA AMD33_RS02660 PF06827 Zinc finger found in FPG and IleRS AMD33_RS02660 PF00133 tRNA synthetases class I (I, L, M and V) AMD33_RS02680 PF01197 Ribosomal protein L31 AMD33_RS02685 PF02424 ApbE family AMD33_RS02690 PF02272 DHHA1 domain AMD33_RS02690 PF01368 DHH family AMD33_RS02695 PF02798 Glutathione S-transferase, N-terminal domain AMD33_RS02700 PF00962 Adenosine/AMP deaminase AMD33_RS02705 PF00265 Thymidine kinase AMD33_RS02710 PF00472 RF-1 domain AMD33_RS02710 PF03462 PCRF domain AMD33_RS02715 PF05175 Methyltransferase small domain AMD33_RS02725 PF00464 Serine hydroxymethyltransferase AMD33_RS02740 PF00664 ABC transporter transmembrane region AMD33_RS02740 PF00005 ABC transporter AMD33_RS02745 PF00664 ABC transporter transmembrane region AMD33_RS02745 PF00005 ABC transporter AMD33_RS02755 PF13193 AMP-binding enzyme C-terminal domain AMD33_RS02755 PF00501 AMP-binding enzyme AMD33_RS02760 PF03062 MBOAT, membrane-bound O-acyltransferase family AMD33_RS02765 PF00550 Phosphopantetheine attachment site AMD33_RS02770 PF04914 DltD protein AMD33_RS02780 PF00665 Integrase core domain AMD33_RS02780 PF13276 HTH-like domain AMD33_RS02780 PF13333 Integrase core domain AMD33_RS02800 PF00690 Cation transporter/ATPase, N-terminus AMD33_RS02800 PF00689 Cation transporting ATPase, C-terminus AMD33_RS02805 PF00425 chorismate binding enzyme AMD33_RS02805 PF04715 Anthranilate synthase component I, N terminal region AMD33_RS02870 PF01381 Helix-turn-helix AMD33_RS02875 PF00589 Phage integrase family AMD33_RS02875 PF14659 Phage integrase, N-terminal SAM-like domain AMD33_RS02885 PF08267 Cobalamin-independent synthase, N-terminal domain AMD33_RS02885 PF01717 Cobalamin-independent synthase, Catalytic domain AMD33_RS02890 PF02219 Methylenetetrahydrofolate reductase AMD33_RS02935 PF16363 GDP-mannose 4,6 dehydratase AMD33_RS02945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD33_RS02955 PF01223 DNA/RNA non-specific endonuclease AMD33_RS02960 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS02970 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS02975 PF00005 ABC transporter AMD33_RS02980 PF00072 Response regulator receiver domain AMD33_RS02980 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS02985 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS02985 PF00672 HAMP domain AMD33_RS02985 PF13426 PAS domain AMD33_RS02990 PF00753 Metallo-beta-lactamase superfamily AMD33_RS03020 PF00690 Cation transporter/ATPase, N-terminus AMD33_RS03020 PF00689 Cation transporting ATPase, C-terminus AMD33_RS03025 PF00881 Nitroreductase family AMD33_RS03035 PF08331 Domain of unknown function (DUF1730) AMD33_RS03040 PF00472 RF-1 domain AMD33_RS03040 PF03462 PCRF domain AMD33_RS03045 PF00005 ABC transporter AMD33_RS03050 PF02687 FtsX-like permease family AMD33_RS03050 PF18075 FtsX extracellular domain AMD33_RS03055 PF00293 NUDIX domain AMD33_RS03060 PF01594 AI-2E family transporter AMD33_RS03070 PF10502 Signal peptidase, peptidase S26 AMD33_RS03075 PF01546 Peptidase family M20/M25/M40 AMD33_RS03075 PF07687 Peptidase dimerisation domain AMD33_RS03090 PF02224 Cytidylate kinase AMD33_RS03095 PF00707 Translation initiation factor IF-3, C-terminal domain AMD33_RS03095 PF05198 Translation initiation factor IF-3, N-terminal domain AMD33_RS03100 PF01632 Ribosomal protein L35 AMD33_RS03105 PF00453 Ribosomal protein L20 AMD33_RS03110 PF01797 Transposase IS200 like AMD33_RS03115 PF01797 Transposase IS200 like AMD33_RS03125 PF01361 Tautomerase enzyme AMD33_RS03130 PF01546 Peptidase family M20/M25/M40 AMD33_RS03135 PF03167 Uracil DNA glycosylase superfamily AMD33_RS03150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMD33_RS03155 PF01676 Metalloenzyme superfamily AMD33_RS03160 PF01048 Phosphorylase superfamily AMD33_RS03175 PF01048 Phosphorylase superfamily AMD33_RS03180 PF03816 Cell envelope-related transcriptional attenuator domain AMD33_RS03190 PF02706 Chain length determinant protein AMD33_RS03195 PF13614 AAA domain AMD33_RS03200 PF02397 Bacterial sugar transferase AMD33_RS03220 PF03275 UDP-galactopyranose mutase AMD33_RS03230 PF01501 Glycosyl transferase family 8 AMD33_RS03230 PF00535 Glycosyl transferase family 2 AMD33_RS03245 PF04321 RmlD substrate binding domain AMD33_RS03290 PF03816 Cell envelope-related transcriptional attenuator domain AMD33_RS03295 PF13333 Integrase core domain AMD33_RS03295 PF00665 Integrase core domain AMD33_RS03295 PF13276 HTH-like domain AMD33_RS03300 PF01527 Transposase AMD33_RS03305 PF13610 DDE domain AMD33_RS03325 PF14667 Polysaccharide biosynthesis C-terminal domain AMD33_RS03325 PF01943 Polysaccharide biosynthesis protein AMD33_RS03335 PF00535 Glycosyl transferase family 2 AMD33_RS03335 PF01501 Glycosyl transferase family 8 AMD33_RS03340 PF13276 HTH-like domain AMD33_RS03340 PF00665 Integrase core domain AMD33_RS03340 PF13333 Integrase core domain AMD33_RS03350 PF01527 Transposase AMD33_RS03355 PF13439 Glycosyltransferase Family 4 AMD33_RS03355 PF00534 Glycosyl transferases group 1 AMD33_RS03370 PF01594 AI-2E family transporter AMD33_RS03375 PF00232 Glycosyl hydrolase family 1 AMD33_RS03380 PF00232 Glycosyl hydrolase family 1 AMD33_RS03385 PF00232 Glycosyl hydrolase family 1 AMD33_RS03395 PF03109 ABC1 family AMD33_RS03415 PF16916 Dimerisation domain of Zinc Transporter AMD33_RS03415 PF01545 Cation efflux family AMD33_RS03420 PF03167 Uracil DNA glycosylase superfamily AMD33_RS03425 PF01979 Amidohydrolase family AMD33_RS03450 PF00676 Dehydrogenase E1 component AMD33_RS03455 PF02779 Transketolase, pyrimidine binding domain AMD33_RS03455 PF00364 Biotin-requiring enzyme AMD33_RS03455 PF02780 Transketolase, C-terminal domain AMD33_RS03460 PF00364 Biotin-requiring enzyme AMD33_RS03460 PF02817 e3 binding domain AMD33_RS03460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMD33_RS03465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS03465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD33_RS03495 PF03714 Bacterial pullanase-associated domain AMD33_RS03495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD33_RS03495 PF00128 Alpha amylase, catalytic domain AMD33_RS03500 PF18494 Pullulanase Ins domain AMD33_RS03500 PF17967 Pullulanase N2 domain AMD33_RS03500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD33_RS03500 PF03714 Bacterial pullanase-associated domain AMD33_RS03500 PF11852 Domain of unknown function (DUF3372) AMD33_RS03505 PF17999 Pullulanase N1-terminal domain AMD33_RS03505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMD33_RS03505 PF00128 Alpha amylase, catalytic domain AMD33_RS03515 PF09375 Imelysin AMD33_RS03520 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMD33_RS03520 PF04261 Dyp-type peroxidase family AMD33_RS03525 PF03239 Iron permease FTR1 family AMD33_RS03530 PF00902 Sec-independent protein translocase protein (TatC) AMD33_RS03535 PF02416 mttA/Hcf106 family AMD33_RS03550 PF02446 4-alpha-glucanotransferase AMD33_RS03555 PF00343 Carbohydrate phosphorylase AMD33_RS03570 PF10437 Bacterial lipoate protein ligase C-terminus AMD33_RS03570 PF03099 Biotin/lipoate A/B protein ligase family AMD33_RS03575 PF00589 Phage integrase family AMD33_RS03575 PF13495 Phage integrase, N-terminal SAM-like domain AMD33_RS03580 PF01433 Peptidase family M1 domain AMD33_RS03580 PF11838 ERAP1-like C-terminal domain AMD33_RS03585 PF01895 PhoU domain AMD33_RS03590 PF00005 ABC transporter AMD33_RS03595 PF00005 ABC transporter AMD33_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS03610 PF12849 PBP superfamily domain AMD33_RS03615 PF01189 16S rRNA methyltransferase RsmB/F AMD33_RS03615 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AMD33_RS03615 PF17126 RsmF rRNA methyltransferase first C-terminal domain AMD33_RS03620 PF00459 Inositol monophosphatase family AMD33_RS03625 PF05256 Uncharacterised protein family (UPF0223) AMD33_RS03630 PF03960 ArsC family AMD33_RS03635 PF01687 Riboflavin kinase AMD33_RS03635 PF06574 FAD synthetase AMD33_RS03640 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMD33_RS03640 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMD33_RS03670 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD33_RS03675 PF13361 UvrD-like helicase C-terminal domain AMD33_RS03675 PF00580 UvrD/REP helicase N-terminal domain AMD33_RS03680 PF01235 Sodium:alanine symporter family AMD33_RS03685 PF01926 50S ribosome-binding GTPase AMD33_RS03685 PF12631 MnmE helical domain AMD33_RS03685 PF10396 GTP-binding protein TrmE N-terminus AMD33_RS03710 PF00149 Calcineurin-like phosphoesterase AMD33_RS03710 PF02872 5'-nucleotidase, C-terminal domain AMD33_RS03720 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS03725 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS03730 PF01425 Amidase AMD33_RS03735 PF00854 POT family AMD33_RS03745 PF00156 Phosphoribosyl transferase domain AMD33_RS03750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD33_RS03755 PF09659 CRISPR-associated protein (Cas_Csm6) AMD33_RS03760 PF03787 RAMP superfamily AMD33_RS03765 PF17953 CRISPR Csm4 C-terminal domain AMD33_RS03770 PF03787 RAMP superfamily AMD33_RS03775 PF03750 Csm2 Type III-A AMD33_RS03780 PF01966 HD domain AMD33_RS03780 PF18211 Csm1 subunit domain B AMD33_RS03785 PF10040 CRISPR-associated endoribonuclease Cas6 AMD33_RS03790 PF09827 CRISPR associated protein Cas2 AMD33_RS03795 PF01867 CRISPR associated protein Cas1 AMD33_RS03800 PF01180 Dihydroorotate dehydrogenase AMD33_RS03805 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AMD33_RS03840 PF05670 NFACT protein RNA binding domain AMD33_RS03860 PF01497 Periplasmic binding protein AMD33_RS03865 PF13419 Haloacid dehalogenase-like hydrolase AMD33_RS03890 PF00107 Zinc-binding dehydrogenase AMD33_RS03890 PF13823 Alcohol dehydrogenase GroES-associated AMD33_RS03890 PF08240 Alcohol dehydrogenase GroES-like domain AMD33_RS03900 PF01545 Cation efflux family AMD33_RS03930 PF03306 Alpha-acetolactate decarboxylase AMD33_RS03935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD33_RS03935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD33_RS03935 PF00205 Thiamine pyrophosphate enzyme, central domain AMD33_RS03945 PF00491 Arginase family AMD33_RS03950 PF06463 Molybdenum Cofactor Synthesis C AMD33_RS03950 PF04055 Radical SAM superfamily AMD33_RS03960 PF01381 Helix-turn-helix AMD33_RS03965 PF06421 GTP-binding protein LepA C-terminus AMD33_RS03965 PF03144 Elongation factor Tu domain 2 AMD33_RS03965 PF00009 Elongation factor Tu GTP binding domain AMD33_RS03965 PF00679 Elongation factor G C-terminus AMD33_RS03980 PF00334 Nucleoside diphosphate kinase AMD33_RS03990 PF01134 Glucose inhibited division protein A AMD33_RS03995 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS04000 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS04000 PF00072 Response regulator receiver domain AMD33_RS04010 PF01131 DNA topoisomerase AMD33_RS04010 PF01751 Toprim domain AMD33_RS04010 PF01396 Topoisomerase DNA binding C4 zinc finger AMD33_RS04015 PF02481 DNA recombination-mediator protein A AMD33_RS04015 PF18255 DNA processing protein A sterile alpha motif domain AMD33_RS04020 PF00480 ROK family AMD33_RS04025 PF01351 Ribonuclease HII AMD33_RS04030 PF01926 50S ribosome-binding GTPase AMD33_RS04040 PF02829 3H domain AMD33_RS04040 PF08279 HTH domain AMD33_RS04050 PF00448 SRP54-type protein, GTPase domain AMD33_RS04050 PF02881 SRP54-type protein, helical bundle domain AMD33_RS04050 PF02978 Signal peptide binding domain AMD33_RS04055 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AMD33_RS04060 PF07702 UTRA domain AMD33_RS04060 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS04065 PF02540 NAD synthase AMD33_RS04065 PF00117 Glutamine amidotransferase class-I AMD33_RS04065 PF00958 GMP synthase C terminal domain AMD33_RS04070 PF12564 Type III restriction/modification enzyme methylation subunit AMD33_RS04075 PF08240 Alcohol dehydrogenase GroES-like domain AMD33_RS04075 PF00107 Zinc-binding dehydrogenase AMD33_RS04090 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS04095 PF00005 ABC transporter AMD33_RS04100 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS04105 PF08274 PhnA Zinc-Ribbon AMD33_RS04105 PF03831 PhnA domain AMD33_RS04110 PF01380 SIS domain AMD33_RS04115 PF03466 LysR substrate binding domain AMD33_RS04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMD33_RS04125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD33_RS04125 PF05257 CHAP domain AMD33_RS04130 PF03601 Conserved hypothetical protein 698 AMD33_RS04140 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AMD33_RS04140 PF01297 Zinc-uptake complex component A periplasmic AMD33_RS04155 PF06100 MCRA family AMD33_RS04165 PF02384 N-6 DNA Methylase AMD33_RS04185 PF00132 Bacterial transferase hexapeptide (six repeats) AMD33_RS04190 PF01053 Cys/Met metabolism PLP-dependent enzyme AMD33_RS04195 PF00291 Pyridoxal-phosphate dependent enzyme AMD33_RS04200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMD33_RS04200 PF18766 SWI2/SNF2 ATPase AMD33_RS04200 PF12008 Type I restriction and modification enzyme - subunit R C terminal AMD33_RS04220 PF00313 'Cold-shock' DNA-binding domain AMD33_RS04225 PF00313 'Cold-shock' DNA-binding domain AMD33_RS04235 PF14527 WhiA LAGLIDADG-like domain AMD33_RS04235 PF02650 WhiA C-terminal HTH domain AMD33_RS04235 PF10298 WhiA N-terminal LAGLIDADG-like domain AMD33_RS04240 PF01933 Uncharacterised protein family UPF0052 AMD33_RS04245 PF03668 P-loop ATPase protein family AMD33_RS04260 PF14489 QueF-like protein AMD33_RS04265 PF04055 Radical SAM superfamily AMD33_RS04270 PF01242 6-pyruvoyl tetrahydropterin synthase AMD33_RS04275 PF06508 Queuosine biosynthesis protein QueC AMD33_RS04280 PF01042 Endoribonuclease L-PSP AMD33_RS04310 PF01336 OB-fold nucleic acid binding domain AMD33_RS04310 PF00152 tRNA synthetases class II (D, K and N) AMD33_RS04315 PF00155 Aminotransferase class I and II AMD33_RS04325 PF13307 Helicase C-terminal domain AMD33_RS04325 PF00929 Exonuclease AMD33_RS04325 PF04851 Type III restriction enzyme, res subunit AMD33_RS04330 PF00753 Metallo-beta-lactamase superfamily AMD33_RS04335 PF02653 Branched-chain amino acid transport system / permease component AMD33_RS04340 PF02653 Branched-chain amino acid transport system / permease component AMD33_RS04345 PF00005 ABC transporter AMD33_RS04350 PF02608 ABC transporter substrate-binding protein PnrA-like AMD33_RS04355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD33_RS04365 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMD33_RS04365 PF02885 Glycosyl transferase family, helical bundle domain AMD33_RS04365 PF00591 Glycosyl transferase family, a/b domain AMD33_RS04370 PF02885 Glycosyl transferase family, helical bundle domain AMD33_RS04370 PF00591 Glycosyl transferase family, a/b domain AMD33_RS04370 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMD33_RS04375 PF05175 Methyltransferase small domain AMD33_RS04380 PF00485 Phosphoribulokinase / Uridine kinase family AMD33_RS04385 PF01649 Ribosomal protein S20 AMD33_RS04390 PF00665 Integrase core domain AMD33_RS04390 PF13333 Integrase core domain AMD33_RS04405 PF00082 Subtilase family AMD33_RS04405 PF06280 Fn3-like domain AMD33_RS04405 PF02225 PA domain AMD33_RS04415 PF00654 Voltage gated chloride channel AMD33_RS04430 PF01610 Transposase AMD33_RS04430 PF13683 Integrase core domain AMD33_RS04435 PF00665 Integrase core domain AMD33_RS04435 PF13333 Integrase core domain AMD33_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS04445 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS04450 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS04465 PF01268 Formate--tetrahydrofolate ligase AMD33_RS04475 PF02441 Flavoprotein AMD33_RS04480 PF12822 ECF transporter, substrate-specific component AMD33_RS04485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD33_RS04485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD33_RS04485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD33_RS04485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD33_RS04505 PF02772 S-adenosylmethionine synthetase, central domain AMD33_RS04505 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMD33_RS04505 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMD33_RS04510 PF08279 HTH domain AMD33_RS04510 PF03099 Biotin/lipoate A/B protein ligase family AMD33_RS04510 PF02237 Biotin protein ligase C terminal domain AMD33_RS04520 PF12169 DNA polymerase III subunits gamma and tau domain III AMD33_RS04525 PF13185 GAF domain AMD33_RS04540 PF01245 Ribosomal protein L19 AMD33_RS04545 PF00654 Voltage gated chloride channel AMD33_RS04550 PF00800 Prephenate dehydratase AMD33_RS04550 PF01817 Chorismate mutase type II AMD33_RS04550 PF01842 ACT domain AMD33_RS04555 PF00654 Voltage gated chloride channel AMD33_RS04560 PF00258 Flavodoxin AMD33_RS04575 PF00756 Putative esterase AMD33_RS04585 PF00005 ABC transporter AMD33_RS04585 PF08402 TOBE domain AMD33_RS04605 PF06458 MucBP domain AMD33_RS04605 PF04650 YSIRK type signal peptide AMD33_RS04605 PF00746 LPXTG cell wall anchor motif AMD33_RS04625 PF00872 Transposase, Mutator family AMD33_RS04635 PF01610 Transposase AMD33_RS04635 PF13683 Integrase core domain AMD33_RS04640 PF02887 Pyruvate kinase, alpha/beta domain AMD33_RS04640 PF00224 Pyruvate kinase, barrel domain AMD33_RS04645 PF00365 Phosphofructokinase AMD33_RS04660 PF00694 Aconitase C-terminal domain AMD33_RS04665 PF00330 Aconitase family (aconitate hydratase) AMD33_RS04675 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD33_RS04680 PF00682 HMGL-like AMD33_RS04680 PF08502 LeuA allosteric (dimerisation) domain AMD33_RS04685 PF00300 Histidine phosphatase superfamily (branch 1) AMD33_RS04690 PF01180 Dihydroorotate dehydrogenase AMD33_RS04700 PF00216 Bacterial DNA-binding protein AMD33_RS04710 PF13472 GDSL-like Lipase/Acylhydrolase family AMD33_RS04715 PF02645 Uncharacterised protein, DegV family COG1307 AMD33_RS04720 PF13476 AAA domain AMD33_RS04725 PF01316 Arginine repressor, DNA binding domain AMD33_RS04725 PF02863 Arginine repressor, C-terminal domain AMD33_RS04730 PF01479 S4 domain AMD33_RS04730 PF01728 FtsJ-like methyltransferase AMD33_RS04735 PF00348 Polyprenyl synthetase AMD33_RS04740 PF02609 Exonuclease VII small subunit AMD33_RS04745 PF13742 OB-fold nucleic acid binding domain AMD33_RS04745 PF02601 Exonuclease VII, large subunit AMD33_RS04755 PF00633 Helix-hairpin-helix motif AMD33_RS04755 PF10576 Iron-sulfur binding domain of endonuclease III AMD33_RS04755 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD33_RS04765 PF04204 Homoserine O-succinyltransferase AMD33_RS04770 PF00156 Phosphoribosyl transferase domain AMD33_RS04775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMD33_RS04775 PF01368 DHH family AMD33_RS04775 PF02272 DHHA1 domain AMD33_RS04775 PF17768 RecJ OB domain AMD33_RS04780 PF00106 short chain dehydrogenase AMD33_RS04785 PF00753 Metallo-beta-lactamase superfamily AMD33_RS04795 PF01926 50S ribosome-binding GTPase AMD33_RS04795 PF16360 GTP-binding GTPase Middle Region AMD33_RS04795 PF13167 GTP-binding GTPase N-terminal AMD33_RS04800 PF01098 Cell cycle protein AMD33_RS04805 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMD33_RS04810 PF01502 Phosphoribosyl-AMP cyclohydrolase AMD33_RS04815 PF00977 Histidine biosynthesis protein AMD33_RS04820 PF00977 Histidine biosynthesis protein AMD33_RS04825 PF00117 Glutamine amidotransferase class-I AMD33_RS04830 PF00475 Imidazoleglycerol-phosphate dehydratase AMD33_RS04835 PF00815 Histidinol dehydrogenase AMD33_RS04840 PF01634 ATP phosphoribosyltransferase AMD33_RS04845 PF13393 Histidyl-tRNA synthetase AMD33_RS04850 PF00155 Aminotransferase class I and II AMD33_RS04860 PF13333 Integrase core domain AMD33_RS04860 PF00665 Integrase core domain AMD33_RS04865 PF13276 HTH-like domain AMD33_RS04865 PF00665 Integrase core domain AMD33_RS04865 PF13333 Integrase core domain AMD33_RS04900 PF13344 Haloacid dehalogenase-like hydrolase AMD33_RS04910 PF04055 Radical SAM superfamily AMD33_RS04910 PF06969 HemN C-terminal domain AMD33_RS04935 PF16363 GDP-mannose 4,6 dehydratase AMD33_RS04940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMD33_RS04945 PF00483 Nucleotidyl transferase AMD33_RS04950 PF01266 FAD dependent oxidoreductase AMD33_RS04955 PF02535 ZIP Zinc transporter AMD33_RS04960 PF01784 NIF3 (NGG1p interacting factor 3) AMD33_RS04965 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AMD33_RS04975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMD33_RS04975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMD33_RS04975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMD33_RS04975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMD33_RS04985 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMD33_RS04990 PF08245 Mur ligase middle domain AMD33_RS04990 PF08353 Domain of unknown function (DUF1727) AMD33_RS04995 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMD33_RS05000 PF03706 Lysylphosphatidylglycerol synthase TM region AMD33_RS05000 PF09924 Uncharacterised conserved protein (DUF2156) AMD33_RS05005 PF00561 alpha/beta hydrolase fold AMD33_RS05020 PF00485 Phosphoribulokinase / Uridine kinase family AMD33_RS05025 PF00271 Helicase conserved C-terminal domain AMD33_RS05025 PF00270 DEAD/DEAH box helicase AMD33_RS05035 PF00171 Aldehyde dehydrogenase family AMD33_RS05045 PF02896 PEP-utilising enzyme, TIM barrel domain AMD33_RS05045 PF05524 PEP-utilising enzyme, N-terminal AMD33_RS05045 PF00391 PEP-utilising enzyme, mobile domain AMD33_RS05050 PF00381 PTS HPr component phosphorylation site AMD33_RS05055 PF00180 Isocitrate/isopropylmalate dehydrogenase AMD33_RS05060 PF00285 Citrate synthase, C-terminal domain AMD33_RS05065 PF00330 Aconitase family (aconitate hydratase) AMD33_RS05065 PF00694 Aconitase C-terminal domain AMD33_RS05070 PF00462 Glutaredoxin AMD33_RS05075 PF08343 Ribonucleotide reductase N-terminal AMD33_RS05075 PF00317 Ribonucleotide reductase, all-alpha domain AMD33_RS05075 PF02867 Ribonucleotide reductase, barrel domain AMD33_RS05080 PF00268 Ribonucleotide reductase, small chain AMD33_RS05110 PF04203 Sortase domain AMD33_RS05115 PF03989 DNA gyrase C-terminal domain, beta-propeller AMD33_RS05115 PF00521 DNA gyrase/topoisomerase IV, subunit A AMD33_RS05120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMD33_RS05120 PF00056 lactate/malate dehydrogenase, NAD binding domain AMD33_RS05125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMD33_RS05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS05130 PF12848 ABC transporter AMD33_RS05130 PF00005 ABC transporter AMD33_RS05160 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS05160 PF00155 Aminotransferase class I and II AMD33_RS05165 PF13597 Anaerobic ribonucleoside-triphosphate reductase AMD33_RS05165 PF03477 ATP cone domain AMD33_RS05180 PF01588 Putative tRNA binding domain AMD33_RS05180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMD33_RS05180 PF03147 Ferredoxin-fold anticodon binding domain AMD33_RS05180 PF03483 B3/4 domain AMD33_RS05180 PF03484 tRNA synthetase B5 domain AMD33_RS05185 PF00583 Acetyltransferase (GNAT) family AMD33_RS05190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMD33_RS05190 PF01409 tRNA synthetases class II core domain (F) AMD33_RS05200 PF02463 RecF/RecN/SMC N terminal domain AMD33_RS05200 PF06470 SMC proteins Flexible Hinge Domain AMD33_RS05205 PF00035 Double-stranded RNA binding motif AMD33_RS05205 PF14622 Ribonuclease-III-like AMD33_RS05210 PF00701 Dihydrodipicolinate synthetase family AMD33_RS05215 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMD33_RS05215 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMD33_RS05235 PF13091 PLD-like domain AMD33_RS05240 PF02151 UvrB/uvrC motif AMD33_RS05240 PF01541 GIY-YIG catalytic domain AMD33_RS05240 PF08459 UvrC Helix-hairpin-helix N-terminal AMD33_RS05245 PF13419 Haloacid dehalogenase-like hydrolase AMD33_RS05250 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS05255 PF00571 CBS domain AMD33_RS05255 PF00005 ABC transporter AMD33_RS05260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMD33_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS05270 PF00221 Aromatic amino acid lyase AMD33_RS05280 PF01175 Urocanase Rossmann-like domain AMD33_RS05280 PF17392 Urocanase C-terminal domain AMD33_RS05280 PF17391 Urocanase N-terminal domain AMD33_RS05285 PF01842 ACT domain AMD33_RS05285 PF03315 Serine dehydratase beta chain AMD33_RS05315 PF09383 NIL domain AMD33_RS05315 PF00005 ABC transporter AMD33_RS05320 PF00005 ABC transporter AMD33_RS05325 PF00196 Bacterial regulatory proteins, luxR family AMD33_RS05325 PF00072 Response regulator receiver domain AMD33_RS05330 PF07730 Histidine kinase AMD33_RS05340 PF00005 ABC transporter AMD33_RS05355 PF01758 Sodium Bile acid symporter family AMD33_RS05370 PF00005 ABC transporter AMD33_RS05390 PF02687 FtsX-like permease family AMD33_RS05400 PF00512 His Kinase A (phospho-acceptor) domain AMD33_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS05400 PF00072 Response regulator receiver domain AMD33_RS05400 PF00989 PAS fold AMD33_RS05400 PF01627 Hpt domain AMD33_RS05400 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMD33_RS05405 PF00072 Response regulator receiver domain AMD33_RS05405 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS05415 PF00860 Permease family AMD33_RS05420 PF00860 Permease family AMD33_RS05425 PF01554 MatE AMD33_RS05430 PF01625 Peptide methionine sulfoxide reductase AMD33_RS05430 PF01641 SelR domain AMD33_RS05435 PF05525 Branched-chain amino acid transport protein AMD33_RS05440 PF01238 Phosphomannose isomerase type I AMD33_RS05445 PF01238 Phosphomannose isomerase type I AMD33_RS05450 PF05532 CsbD-like AMD33_RS05455 PF13520 Amino acid permease AMD33_RS05465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD33_RS05470 PF02082 Transcriptional regulator AMD33_RS05480 PF02378 Phosphotransferase system, EIIC AMD33_RS05485 PF00881 Nitroreductase family AMD33_RS05495 PF00248 Aldo/keto reductase family AMD33_RS05500 PF01370 NAD dependent epimerase/dehydratase family AMD33_RS05505 PF08903 Domain of unknown function (DUF1846) AMD33_RS05515 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS05515 PF00072 Response regulator receiver domain AMD33_RS05520 PF00072 Response regulator receiver domain AMD33_RS05520 PF00486 Transcriptional regulatory protein, C terminal AMD33_RS05540 PF11798 IMS family HHH motif AMD33_RS05540 PF11799 impB/mucB/samB family C-terminal domain AMD33_RS05540 PF00817 impB/mucB/samB family AMD33_RS05560 PF01810 LysE type translocator AMD33_RS05570 PF01501 Glycosyl transferase family 8 AMD33_RS05570 PF00535 Glycosyl transferase family 2 AMD33_RS05575 PF02687 FtsX-like permease family AMD33_RS05580 PF00005 ABC transporter AMD33_RS05620 PF01381 Helix-turn-helix AMD33_RS05625 PF13333 Integrase core domain AMD33_RS05625 PF00665 Integrase core domain AMD33_RS05640 PF13476 AAA domain AMD33_RS05645 PF12320 Type 5 capsule protein repressor C-terminal domain AMD33_RS05645 PF00149 Calcineurin-like phosphoesterase AMD33_RS05650 PF02929 Beta galactosidase small chain AMD33_RS05650 PF00703 Glycosyl hydrolases family 2 AMD33_RS05650 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMD33_RS05650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMD33_RS05650 PF16353 Domain of unknown function(DUF4981) AMD33_RS05655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS05660 PF01263 Aldose 1-epimerase AMD33_RS05665 PF01370 NAD dependent epimerase/dehydratase family AMD33_RS05670 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMD33_RS05670 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMD33_RS05675 PF00288 GHMP kinases N terminal domain AMD33_RS05675 PF10509 Galactokinase galactose-binding signature AMD33_RS05675 PF08544 GHMP kinases C terminal AMD33_RS05680 PF00356 Bacterial regulatory proteins, lacI family AMD33_RS05695 PF00746 LPXTG cell wall anchor motif AMD33_RS05695 PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region AMD33_RS05695 PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region AMD33_RS05700 PF12848 ABC transporter AMD33_RS05700 PF00005 ABC transporter AMD33_RS05710 PF02655 ATP-grasp domain AMD33_RS05710 PF18419 ATP-grasp-like domain AMD33_RS05710 PF04262 Glutamate-cysteine ligase AMD33_RS05725 PF01580 FtsK/SpoIIIE family AMD33_RS05725 PF09397 Ftsk gamma domain AMD33_RS05725 PF17854 FtsK alpha domain AMD33_RS05730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS05735 PF01746 tRNA (Guanine-1)-methyltransferase AMD33_RS05740 PF01782 RimM N-terminal domain AMD33_RS05740 PF05239 PRC-barrel domain AMD33_RS05755 PF00072 Response regulator receiver domain AMD33_RS05755 PF00196 Bacterial regulatory proteins, luxR family AMD33_RS05760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS05760 PF07730 Histidine kinase AMD33_RS05770 PF03793 PASTA domain AMD33_RS05770 PF00069 Protein kinase domain AMD33_RS05780 PF01029 NusB family AMD33_RS05780 PF01189 16S rRNA methyltransferase RsmB/F AMD33_RS05785 PF00551 Formyl transferase AMD33_RS05785 PF02911 Formyl transferase, C-terminal domain AMD33_RS05790 PF04851 Type III restriction enzyme, res subunit AMD33_RS05790 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMD33_RS05790 PF18074 Primosomal protein N C-terminal domain AMD33_RS05790 PF00271 Helicase conserved C-terminal domain AMD33_RS05790 PF17764 3′ DNA-binding domain (3′BD) AMD33_RS05795 PF01192 RNA polymerase Rpb6 AMD33_RS05800 PF00625 Guanylate kinase AMD33_RS05805 PF00448 SRP54-type protein, GTPase domain AMD33_RS05805 PF02881 SRP54-type protein, helical bundle domain AMD33_RS05820 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS05825 PF00005 ABC transporter AMD33_RS05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD33_RS05840 PF00005 ABC transporter AMD33_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS05845 PF12911 N-terminal TM domain of oligopeptide transport permease C AMD33_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS05865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD33_RS05875 PF13276 HTH-like domain AMD33_RS05875 PF00665 Integrase core domain AMD33_RS05875 PF13333 Integrase core domain AMD33_RS05880 PF01026 TatD related DNase AMD33_RS05885 PF07690 Major Facilitator Superfamily AMD33_RS05890 PF00665 Integrase core domain AMD33_RS05890 PF13333 Integrase core domain AMD33_RS05900 PF01515 Phosphate acetyl/butaryl transferase AMD33_RS05905 PF00849 RNA pseudouridylate synthase AMD33_RS05910 PF01513 ATP-NAD kinase AMD33_RS05915 PF04607 Region found in RelA / SpoT proteins AMD33_RS05925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD33_RS05925 PF14572 Phosphoribosyl synthetase-associated domain AMD33_RS05930 PF00266 Aminotransferase class-V AMD33_RS05940 PF02629 CoA binding domain AMD33_RS05940 PF06971 Putative DNA-binding protein N-terminus AMD33_RS05945 PF07722 Peptidase C26 AMD33_RS05950 PF04002 RadC-like JAB domain AMD33_RS05960 PF00535 Glycosyl transferase family 2 AMD33_RS05965 PF00005 ABC transporter AMD33_RS05975 PF00535 Glycosyl transferase family 2 AMD33_RS05985 PF01501 Glycosyl transferase family 8 AMD33_RS05985 PF00535 Glycosyl transferase family 2 AMD33_RS06005 PF04321 RmlD substrate binding domain AMD33_RS06015 PF00535 Glycosyl transferase family 2 AMD33_RS06025 PF01883 Iron-sulfur cluster assembly protein AMD33_RS06030 PF00140 Sigma-70 factor, region 1.2 AMD33_RS06030 PF04545 Sigma-70, region 4 AMD33_RS06030 PF04542 Sigma-70 region 2 AMD33_RS06030 PF04539 Sigma-70 region 3 AMD33_RS06030 PF03979 Sigma-70 factor, region 1.1 AMD33_RS06035 PF01807 CHC2 zinc finger AMD33_RS06035 PF08275 DNA primase catalytic core, N-terminal domain AMD33_RS06035 PF10410 DnaB-helicase binding domain of primase AMD33_RS06040 PF01741 Large-conductance mechanosensitive channel, MscL AMD33_RS06045 PF01165 Ribosomal protein S21 AMD33_RS06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS06060 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS06065 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS06070 PF00293 NUDIX domain AMD33_RS06075 PF00271 Helicase conserved C-terminal domain AMD33_RS06075 PF12344 Ultra-violet resistance protein B AMD33_RS06075 PF02151 UvrB/uvrC motif AMD33_RS06075 PF17757 UvrB interaction domain AMD33_RS06075 PF04851 Type III restriction enzyme, res subunit AMD33_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06100 PF00005 ABC transporter AMD33_RS06110 PF09269 Domain of unknown function (DUF1967) AMD33_RS06110 PF01018 GTP1/OBG AMD33_RS06110 PF01926 50S ribosome-binding GTPase AMD33_RS06115 PF00849 RNA pseudouridylate synthase AMD33_RS06115 PF01479 S4 domain AMD33_RS06155 PF09711 CRISPR-associated protein (Cas_Csn2) AMD33_RS06160 PF09827 CRISPR associated protein Cas2 AMD33_RS06165 PF01867 CRISPR associated protein Cas1 AMD33_RS06180 PF06160 Septation ring formation regulator, EzrA AMD33_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMD33_RS06185 PF01751 Toprim domain AMD33_RS06185 PF00204 DNA gyrase B AMD33_RS06185 PF00986 DNA gyrase B subunit, carboxyl terminus AMD33_RS06195 PF04172 LrgB-like family AMD33_RS06200 PF03788 LrgA family AMD33_RS06210 PF03960 ArsC family AMD33_RS06220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMD33_RS06220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMD33_RS06220 PF01842 ACT domain AMD33_RS06230 PF00266 Aminotransferase class-V AMD33_RS06235 PF00480 ROK family AMD33_RS06245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMD33_RS06255 PF13416 Bacterial extracellular solute-binding protein AMD33_RS06260 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06270 PF08402 TOBE domain AMD33_RS06270 PF00005 ABC transporter AMD33_RS06275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMD33_RS06275 PF01565 FAD binding domain AMD33_RS06280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMD33_RS06285 PF02152 Dihydroneopterin aldolase AMD33_RS06290 PF09154 Domain of unknown function (DUF1939) AMD33_RS06290 PF00128 Alpha amylase, catalytic domain AMD33_RS06295 PF00809 Pterin binding enzyme AMD33_RS06300 PF01227 GTP cyclohydrolase I AMD33_RS06305 PF13520 Amino acid permease AMD33_RS06310 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS06310 PF08245 Mur ligase middle domain AMD33_RS06320 PF00886 Ribosomal protein S16 AMD33_RS06325 PF09313 Domain of unknown function (DUF1971) AMD33_RS06325 PF03848 Tellurite resistance protein TehB AMD33_RS06335 PF03372 Endonuclease/Exonuclease/phosphatase family AMD33_RS06350 PF00781 Diacylglycerol kinase catalytic domain AMD33_RS06355 PF00533 BRCA1 C Terminus (BRCT) domain AMD33_RS06355 PF01653 NAD-dependent DNA ligase adenylation domain AMD33_RS06355 PF03120 NAD-dependent DNA ligase OB-fold domain AMD33_RS06355 PF12826 Helix-hairpin-helix motif AMD33_RS06355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMD33_RS06360 PF06177 QueT transporter AMD33_RS06370 PF00557 Metallopeptidase family M24 AMD33_RS06375 PF03061 Thioesterase superfamily AMD33_RS06375 PF00571 CBS domain AMD33_RS06375 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS06375 PF07085 DRTGG domain AMD33_RS06385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMD33_RS06390 PF00753 Metallo-beta-lactamase superfamily AMD33_RS06390 PF03772 Competence protein AMD33_RS06390 PF13567 Domain of unknown function (DUF4131) AMD33_RS06395 PF10531 SLBB domain AMD33_RS06400 PF01553 Acyltransferase AMD33_RS06405 PF01522 Polysaccharide deacetylase AMD33_RS06410 PF05175 Methyltransferase small domain AMD33_RS06415 PF01541 GIY-YIG catalytic domain AMD33_RS06420 PF00270 DEAD/DEAH box helicase AMD33_RS06420 PF00271 Helicase conserved C-terminal domain AMD33_RS06430 PF08000 Bacterial PH domain AMD33_RS06435 PF09515 Thiamine transporter protein (Thia_YuaJ) AMD33_RS06440 PF01381 Helix-turn-helix AMD33_RS06445 PF07690 Major Facilitator Superfamily AMD33_RS06450 PF03144 Elongation factor Tu domain 2 AMD33_RS06450 PF16658 Class II release factor RF3, C-terminal domain AMD33_RS06450 PF00009 Elongation factor Tu GTP binding domain AMD33_RS06460 PF08245 Mur ligase middle domain AMD33_RS06460 PF02875 Mur ligase family, glutamate ligase domain AMD33_RS06460 PF01225 Mur ligase family, catalytic domain AMD33_RS06475 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMD33_RS06480 PF00005 ABC transporter AMD33_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06495 PF01820 D-ala D-ala ligase N-terminus AMD33_RS06495 PF07478 D-ala D-ala ligase C-terminus AMD33_RS06505 PF00403 Heavy-metal-associated domain AMD33_RS06510 PF03965 Penicillinase repressor AMD33_RS06515 PF00290 Tryptophan synthase alpha chain AMD33_RS06520 PF00291 Pyridoxal-phosphate dependent enzyme AMD33_RS06525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMD33_RS06530 PF00218 Indole-3-glycerol phosphate synthase AMD33_RS06535 PF00591 Glycosyl transferase family, a/b domain AMD33_RS06535 PF02885 Glycosyl transferase family, helical bundle domain AMD33_RS06540 PF00117 Glutamine amidotransferase class-I AMD33_RS06545 PF04715 Anthranilate synthase component I, N terminal region AMD33_RS06545 PF00425 chorismate binding enzyme AMD33_RS06550 PF01817 Chorismate mutase type II AMD33_RS06550 PF02153 Prephenate dehydrogenase AMD33_RS06570 PF02575 YbaB/EbfC DNA-binding family AMD33_RS06580 PF13411 MerR HTH family regulatory protein AMD33_RS06585 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD33_RS06585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD33_RS06585 PF14579 Helix-hairpin-helix motif AMD33_RS06585 PF02811 PHP domain AMD33_RS06585 PF00929 Exonuclease AMD33_RS06590 PF04394 Protein of unknown function, DUF536 AMD33_RS06590 PF08279 HTH domain AMD33_RS06595 PF01883 Iron-sulfur cluster assembly protein AMD33_RS06600 PF00920 Dehydratase family AMD33_RS06615 PF02390 Putative methyltransferase AMD33_RS06630 PF00005 ABC transporter AMD33_RS06635 PF01230 HIT domain AMD33_RS06655 PF07724 AAA domain (Cdc48 subfamily) AMD33_RS06655 PF00004 ATPase family associated with various cellular activities (AAA) AMD33_RS06655 PF17871 AAA lid domain AMD33_RS06655 PF10431 C-terminal, D2-small domain, of ClpB protein AMD33_RS06660 PF05636 HIGH Nucleotidyl Transferase AMD33_RS06665 PF13649 Methyltransferase domain AMD33_RS06675 PF01966 HD domain AMD33_RS06680 PF01467 Cytidylyltransferase-like AMD33_RS06685 PF01985 CRS1 / YhbY (CRM) domain AMD33_RS06690 PF01926 50S ribosome-binding GTPase AMD33_RS06700 PF00892 EamA-like transporter family AMD33_RS06710 PF02934 GatB/GatE catalytic domain AMD33_RS06710 PF02637 GatB domain AMD33_RS06715 PF01425 Amidase AMD33_RS06720 PF02686 Glu-tRNAGln amidotransferase C subunit AMD33_RS06735 PF01625 Peptide methionine sulfoxide reductase AMD33_RS06740 PF03180 NLPA lipoprotein AMD33_RS06745 PF00857 Isochorismatase family AMD33_RS06750 PF08222 CodY helix-turn-helix domain AMD33_RS06750 PF06018 CodY GAF-like domain AMD33_RS06755 PF00155 Aminotransferase class I and II AMD33_RS06760 PF00582 Universal stress protein family AMD33_RS06775 PF04055 Radical SAM superfamily AMD33_RS06780 PF00571 CBS domain AMD33_RS06780 PF03471 Transporter associated domain AMD33_RS06780 PF01595 Cyclin M transmembrane N-terminal domain AMD33_RS06785 PF00005 ABC transporter AMD33_RS06790 PF00999 Sodium/hydrogen exchanger family AMD33_RS06800 PF06962 Putative rRNA methylase AMD33_RS06805 PF16199 Radical_SAM C-terminal domain AMD33_RS06805 PF04055 Radical SAM superfamily AMD33_RS06810 PF05362 Lon protease (S16) C-terminal proteolytic domain AMD33_RS06810 PF13180 PDZ domain AMD33_RS06815 PF01467 Cytidylyltransferase-like AMD33_RS06825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMD33_RS06835 PF00005 ABC transporter AMD33_RS06840 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS06855 PF00817 impB/mucB/samB family AMD33_RS06855 PF11799 impB/mucB/samB family C-terminal domain AMD33_RS06855 PF11798 IMS family HHH motif AMD33_RS06860 PF02901 Pyruvate formate lyase-like AMD33_RS06860 PF01228 Glycine radical AMD33_RS06865 PF00194 Eukaryotic-type carbonic anhydrase AMD33_RS06890 PF03649 Uncharacterised protein family (UPF0014) AMD33_RS06895 PF00005 ABC transporter AMD33_RS06900 PF00144 Beta-lactamase AMD33_RS06915 PF00230 Major intrinsic protein AMD33_RS06920 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD33_RS06920 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AMD33_RS06920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMD33_RS06950 PF13333 Integrase core domain AMD33_RS06950 PF00665 Integrase core domain AMD33_RS07000 PF03412 Peptidase C39 family AMD33_RS07000 PF00664 ABC transporter transmembrane region AMD33_RS07000 PF00005 ABC transporter AMD33_RS07005 PF00005 ABC transporter AMD33_RS07005 PF00664 ABC transporter transmembrane region AMD33_RS07010 PF00664 ABC transporter transmembrane region AMD33_RS07010 PF00005 ABC transporter AMD33_RS07025 PF04055 Radical SAM superfamily AMD33_RS07030 PF06265 Protein of unknown function (DUF1027) AMD33_RS07035 PF02872 5'-nucleotidase, C-terminal domain AMD33_RS07040 PF00270 DEAD/DEAH box helicase AMD33_RS07040 PF00271 Helicase conserved C-terminal domain AMD33_RS07045 PF00953 Glycosyl transferase family 4 AMD33_RS07045 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMD33_RS07050 PF03793 PASTA domain AMD33_RS07050 PF00905 Penicillin binding protein transpeptidase domain AMD33_RS07050 PF03717 Penicillin-binding Protein dimerisation domain AMD33_RS07060 PF01795 MraW methylase family AMD33_RS07085 PF00171 Aldehyde dehydrogenase family AMD33_RS07090 PF00696 Amino acid kinase family AMD33_RS07100 PF13732 Domain of unknown function (DUF4162) AMD33_RS07100 PF00005 ABC transporter AMD33_RS07105 PF04474 Protein of unknown function (DUF554) AMD33_RS07110 PF12705 PD-(D/E)XK nuclease superfamily AMD33_RS07110 PF13361 UvrD-like helicase C-terminal domain AMD33_RS07110 PF00580 UvrD/REP helicase N-terminal domain AMD33_RS07115 PF12705 PD-(D/E)XK nuclease superfamily AMD33_RS07150 PF00710 Asparaginase, N-terminal AMD33_RS07150 PF17763 Glutaminase/Asparaginase C-terminal domain AMD33_RS07155 PF00270 DEAD/DEAH box helicase AMD33_RS07155 PF00271 Helicase conserved C-terminal domain AMD33_RS07155 PF17191 RecG wedge domain AMD33_RS07160 PF00842 Alanine racemase, C-terminal domain AMD33_RS07160 PF01168 Alanine racemase, N-terminal domain AMD33_RS07165 PF01648 4'-phosphopantetheinyl transferase superfamily AMD33_RS07170 PF00793 DAHP synthetase I family AMD33_RS07175 PF00793 DAHP synthetase I family AMD33_RS07180 PF07517 SecA DEAD-like domain AMD33_RS07180 PF07516 SecA Wing and Scaffold domain AMD33_RS07180 PF01043 SecA preprotein cross-linking domain AMD33_RS07180 PF02810 SEC-C motif AMD33_RS07190 PF01238 Phosphomannose isomerase type I AMD33_RS07195 PF00480 ROK family AMD33_RS07200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS07200 PF00367 phosphotransferase system, EIIB AMD33_RS07200 PF02378 Phosphotransferase system, EIIC AMD33_RS07205 PF00251 Glycosyl hydrolases family 32 N-terminal domain AMD33_RS07205 PF08244 Glycosyl hydrolases family 32 C terminal AMD33_RS07210 PF00356 Bacterial regulatory proteins, lacI family AMD33_RS07215 PF01029 NusB family AMD33_RS07220 PF03780 Asp23 family, cell envelope-related function AMD33_RS07225 PF01132 Elongation factor P (EF-P) OB domain AMD33_RS07225 PF09285 Elongation factor P, C-terminal AMD33_RS07225 PF08207 Elongation factor P (EF-P) KOW-like domain AMD33_RS07230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMD33_RS07235 PF00557 Metallopeptidase family M24 AMD33_RS07235 PF01321 Creatinase/Prolidase N-terminal domain AMD33_RS07245 PF00005 ABC transporter AMD33_RS07250 PF00005 ABC transporter AMD33_RS07265 PF17760 UvrA interaction domain AMD33_RS07265 PF00005 ABC transporter AMD33_RS07265 PF17755 UvrA DNA-binding domain AMD33_RS07285 PF01084 Ribosomal protein S18 AMD33_RS07290 PF00436 Single-strand binding protein family AMD33_RS07295 PF01250 Ribosomal protein S6 AMD33_RS07305 PF14815 NUDIX domain AMD33_RS07305 PF00730 HhH-GPD superfamily base excision DNA repair protein AMD33_RS07305 PF00633 Helix-hairpin-helix motif AMD33_RS07325 PF00476 DNA polymerase family A AMD33_RS07325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMD33_RS07325 PF01367 5'-3' exonuclease, C-terminal SAM fold AMD33_RS07330 PF00488 MutS domain V AMD33_RS07330 PF01713 Smr domain AMD33_RS07345 PF11858 Domain of unknown function (DUF3378) AMD33_RS07345 PF01351 Ribonuclease HII AMD33_RS07350 PF10502 Signal peptidase, peptidase S26 AMD33_RS07355 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMD33_RS07355 PF14490 Helix-hairpin-helix containing domain AMD33_RS07355 PF13538 UvrD-like helicase C-terminal domain AMD33_RS07370 PF00814 Glycoprotease family AMD33_RS07375 PF00583 Acetyltransferase (GNAT) family AMD33_RS07380 PF00814 Glycoprotease family AMD33_RS07385 PF07288 Protein of unknown function (DUF1447) AMD33_RS07390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMD33_RS07390 PF17770 Ribonuclease J C-terminal domain AMD33_RS07390 PF00753 Metallo-beta-lactamase superfamily AMD33_RS07400 PF00120 Glutamine synthetase, catalytic domain AMD33_RS07400 PF03951 Glutamine synthetase, beta-Grasp domain AMD33_RS07405 PF13411 MerR HTH family regulatory protein AMD33_RS07425 PF00162 Phosphoglycerate kinase AMD33_RS07430 PF01797 Transposase IS200 like AMD33_RS07445 PF13276 HTH-like domain AMD33_RS07445 PF13333 Integrase core domain AMD33_RS07445 PF00665 Integrase core domain AMD33_RS07450 PF13276 HTH-like domain AMD33_RS07450 PF00665 Integrase core domain AMD33_RS07450 PF13333 Integrase core domain AMD33_RS07455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMD33_RS07455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD33_RS07460 PF03764 Elongation factor G, domain IV AMD33_RS07460 PF14492 Elongation Factor G, domain II AMD33_RS07460 PF00679 Elongation factor G C-terminus AMD33_RS07460 PF03144 Elongation factor Tu domain 2 AMD33_RS07460 PF00009 Elongation factor Tu GTP binding domain AMD33_RS07465 PF00177 Ribosomal protein S7p/S5e AMD33_RS07470 PF00164 Ribosomal protein S12/S23 AMD33_RS07475 PF13683 Integrase core domain AMD33_RS07475 PF01610 Transposase AMD33_RS07480 PF00156 Phosphoribosyl transferase domain AMD33_RS07480 PF09182 Bacterial purine repressor, N-terminal AMD33_RS07485 PF01966 HD domain AMD33_RS07485 PF01336 OB-fold nucleic acid binding domain AMD33_RS07490 PF02646 RmuC family AMD33_RS07500 PF00834 Ribulose-phosphate 3 epimerase family AMD33_RS07505 PF03193 RsgA GTPase AMD33_RS07505 PF16745 RsgA N-terminal domain AMD33_RS07515 PF00398 Ribosomal RNA adenine dimethylase AMD33_RS07520 PF13331 Domain of unknown function (DUF4093) AMD33_RS07525 PF01026 TatD related DNase AMD33_RS07530 PF13380 CoA binding domain AMD33_RS07535 PF00085 Thioredoxin AMD33_RS07540 PF01661 Macro domain AMD33_RS07575 PF01702 Queuine tRNA-ribosyltransferase AMD33_RS07580 PF01797 Transposase IS200 like AMD33_RS07585 PF00468 Ribosomal protein L34 AMD33_RS07595 PF02096 60Kd inner membrane protein AMD33_RS07600 PF00825 Ribonuclease P AMD33_RS07605 PF14698 Argininosuccinate lyase C-terminal AMD33_RS07605 PF00206 Lyase AMD33_RS07615 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMD33_RS07620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD33_RS07625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD33_RS07630 PF00687 Ribosomal protein L1p/L10e family AMD33_RS07635 PF00298 Ribosomal protein L11, RNA binding domain AMD33_RS07635 PF03946 Ribosomal protein L11, N-terminal domain AMD33_RS07645 PF00484 Carbonic anhydrase AMD33_RS07650 PF01987 Mitochondrial biogenesis AIM24 AMD33_RS07655 PF01987 Mitochondrial biogenesis AIM24 AMD33_RS07660 PF18073 Rubredoxin metal binding domain AMD33_RS07665 PF00692 dUTPase AMD33_RS07695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMD33_RS07695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMD33_RS07700 PF00483 Nucleotidyl transferase AMD33_RS07705 PF01694 Rhomboid family AMD33_RS07710 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMD33_RS07715 PF07687 Peptidase dimerisation domain AMD33_RS07715 PF01546 Peptidase family M20/M25/M40 AMD33_RS07720 PF14602 Hexapeptide repeat of succinyl-transferase AMD33_RS07720 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AMD33_RS07720 PF00132 Bacterial transferase hexapeptide (six repeats) AMD33_RS07730 PF13847 Methyltransferase domain AMD33_RS07750 PF14437 MafB19-like deaminase AMD33_RS07755 PF00436 Single-strand binding protein family AMD33_RS07760 PF01206 Sulfurtransferase TusA AMD33_RS07765 PF04143 Sulphur transport AMD33_RS07770 PF14794 Domain of unknown function (DUF4479) AMD33_RS07770 PF01588 Putative tRNA binding domain AMD33_RS07775 PF00085 Thioredoxin AMD33_RS07785 PF05343 M42 glutamyl aminopeptidase AMD33_RS07790 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMD33_RS07790 PF03807 NADP oxidoreductase coenzyme F420-dependent AMD33_RS07795 PF02517 CPBP intramembrane metalloprotease AMD33_RS07810 PF01381 Helix-turn-helix AMD33_RS07815 PF00871 Acetokinase family AMD33_RS07850 PF00482 Type II secretion system (T2SS), protein F AMD33_RS07855 PF00437 Type II/IV secretion system protein AMD33_RS07865 PF00623 RNA polymerase Rpb1, domain 2 AMD33_RS07865 PF04983 RNA polymerase Rpb1, domain 3 AMD33_RS07865 PF04998 RNA polymerase Rpb1, domain 5 AMD33_RS07865 PF04997 RNA polymerase Rpb1, domain 1 AMD33_RS07865 PF05000 RNA polymerase Rpb1, domain 4 AMD33_RS07870 PF04565 RNA polymerase Rpb2, domain 3 AMD33_RS07870 PF04561 RNA polymerase Rpb2, domain 2 AMD33_RS07870 PF04563 RNA polymerase beta subunit AMD33_RS07870 PF04560 RNA polymerase Rpb2, domain 7 AMD33_RS07870 PF00562 RNA polymerase Rpb2, domain 6 AMD33_RS07870 PF10385 RNA polymerase beta subunit external 1 domain AMD33_RS07885 PF00579 tRNA synthetases class I (W and Y) AMD33_RS07885 PF01479 S4 domain AMD33_RS07890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMD33_RS07890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMD33_RS07895 PF10369 Small subunit of acetolactate synthase AMD33_RS07895 PF01842 ACT domain AMD33_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMD33_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain AMD33_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMD33_RS07905 PF00920 Dehydratase family AMD33_RS07915 PF03780 Asp23 family, cell envelope-related function AMD33_RS07920 PF01554 MatE AMD33_RS07925 PF14821 Threonine synthase N terminus AMD33_RS07925 PF00291 Pyridoxal-phosphate dependent enzyme AMD33_RS07930 PF00465 Iron-containing alcohol dehydrogenase AMD33_RS07935 PF00171 Aldehyde dehydrogenase family AMD33_RS07935 PF00465 Iron-containing alcohol dehydrogenase AMD33_RS07940 PF00171 Aldehyde dehydrogenase family AMD33_RS07940 PF00465 Iron-containing alcohol dehydrogenase AMD33_RS07945 PF00171 Aldehyde dehydrogenase family AMD33_RS07945 PF00465 Iron-containing alcohol dehydrogenase AMD33_RS07950 PF00465 Iron-containing alcohol dehydrogenase AMD33_RS07950 PF00171 Aldehyde dehydrogenase family AMD33_RS07955 PF05649 Peptidase family M13 AMD33_RS07955 PF01431 Peptidase family M13 AMD33_RS07960 PF00128 Alpha amylase, catalytic domain AMD33_RS07960 PF16657 Maltogenic Amylase, C-terminal domain AMD33_RS07965 PF16657 Maltogenic Amylase, C-terminal domain AMD33_RS07965 PF00128 Alpha amylase, catalytic domain AMD33_RS07970 PF11941 Domain of unknown function (DUF3459) AMD33_RS07970 PF00128 Alpha amylase, catalytic domain AMD33_RS07980 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS07985 PF00392 Bacterial regulatory proteins, gntR family AMD33_RS07985 PF07702 UTRA domain AMD33_RS07990 PF04260 Protein of unknown function (DUF436) AMD33_RS08020 PF00375 Sodium:dicarboxylate symporter family AMD33_RS08055 PF10711 Hypothetical protein (DUF2513) AMD33_RS08080 PF00145 C-5 cytosine-specific DNA methylase AMD33_RS08090 PF01116 Fructose-bisphosphate aldolase class-II AMD33_RS08120 PF01196 Ribosomal protein L17 AMD33_RS08125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMD33_RS08125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMD33_RS08125 PF01000 RNA polymerase Rpb3/RpoA insert domain AMD33_RS08130 PF00411 Ribosomal protein S11 AMD33_RS08135 PF00416 Ribosomal protein S13/S18 AMD33_RS08140 PF01176 Translation initiation factor 1A / IF-1 AMD33_RS08145 PF05191 Adenylate kinase, active site lid AMD33_RS08150 PF00344 SecY translocase AMD33_RS08155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMD33_RS08160 PF00327 Ribosomal protein L30p/L7e AMD33_RS08165 PF00333 Ribosomal protein S5, N-terminal domain AMD33_RS08165 PF03719 Ribosomal protein S5, C-terminal domain AMD33_RS08170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMD33_RS08175 PF00347 Ribosomal protein L6 AMD33_RS08180 PF00410 Ribosomal protein S8 AMD33_RS08185 PF00253 Ribosomal protein S14p/S29e AMD33_RS08190 PF00673 ribosomal L5P family C-terminus AMD33_RS08190 PF00281 Ribosomal protein L5 AMD33_RS08195 PF00467 KOW motif AMD33_RS08195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMD33_RS08200 PF00238 Ribosomal protein L14p/L23e AMD33_RS08205 PF00366 Ribosomal protein S17 AMD33_RS08210 PF00831 Ribosomal L29 protein AMD33_RS08215 PF00252 Ribosomal protein L16p/L10e AMD33_RS08220 PF00189 Ribosomal protein S3, C-terminal domain AMD33_RS08220 PF07650 KH domain AMD33_RS08225 PF00237 Ribosomal protein L22p/L17e AMD33_RS08230 PF00203 Ribosomal protein S19 AMD33_RS08235 PF03947 Ribosomal Proteins L2, C-terminal domain AMD33_RS08235 PF00181 Ribosomal Proteins L2, RNA binding domain AMD33_RS08240 PF00276 Ribosomal protein L23 AMD33_RS08245 PF00573 Ribosomal protein L4/L1 family AMD33_RS08250 PF00297 Ribosomal protein L3 AMD33_RS08255 PF00338 Ribosomal protein S10p/S20e AMD33_RS08260 PF17864 RuvB AAA lid domain AMD33_RS08260 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD33_RS08260 PF05491 RuvB C-terminal winged helix domain AMD33_RS08265 PF01757 Acyltransferase family AMD33_RS08275 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMD33_RS08280 PF00709 Adenylosuccinate synthetase AMD33_RS08295 PF00899 ThiF family AMD33_RS08310 PF00069 Protein kinase domain AMD33_RS08315 PF00664 ABC transporter transmembrane region AMD33_RS08315 PF00005 ABC transporter AMD33_RS08320 PF01381 Helix-turn-helix AMD33_RS08330 PF00005 ABC transporter AMD33_RS08330 PF00664 ABC transporter transmembrane region AMD33_RS08355 PF12002 MgsA AAA+ ATPase C terminal AMD33_RS08355 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMD33_RS08355 PF16193 AAA C-terminal domain AMD33_RS08360 PF00830 Ribosomal L28 family AMD33_RS08365 PF06135 IreB regulatory phosphoprotein AMD33_RS08370 PF03652 Holliday junction resolvase AMD33_RS08375 PF06949 Protein of unknown function (DUF1292) AMD33_RS08385 PF03477 ATP cone domain AMD33_RS08385 PF13597 Anaerobic ribonucleoside-triphosphate reductase AMD33_RS08410 PF02938 GAD domain AMD33_RS08410 PF01336 OB-fold nucleic acid binding domain AMD33_RS08410 PF00152 tRNA synthetases class II (D, K and N) AMD33_RS08420 PF03129 Anticodon binding domain AMD33_RS08420 PF13393 Histidyl-tRNA synthetase AMD33_RS08425 PF01717 Cobalamin-independent synthase, Catalytic domain AMD33_RS08430 PF01717 Cobalamin-independent synthase, Catalytic domain AMD33_RS08435 PF01783 Ribosomal L32p protein family AMD33_RS08440 PF00471 Ribosomal protein L33 AMD33_RS08465 PF04226 Transglycosylase associated protein AMD33_RS08475 PF03780 Asp23 family, cell envelope-related function AMD33_RS08480 PF05532 CsbD-like AMD33_RS08510 PF06993 Protein of unknown function (DUF1304) AMD33_RS08515 PF01479 S4 domain AMD33_RS08515 PF00163 Ribosomal protein S4/S9 N-terminal domain AMD33_RS08525 PF03796 DnaB-like helicase C terminal domain AMD33_RS08525 PF00772 DnaB-like helicase N terminal domain AMD33_RS08530 PF03948 Ribosomal protein L9, C-terminal domain AMD33_RS08530 PF01281 Ribosomal protein L9, N-terminal domain AMD33_RS08535 PF02272 DHHA1 domain AMD33_RS08535 PF01368 DHH family AMD33_RS08540 PF01134 Glucose inhibited division protein A AMD33_RS08540 PF13932 GidA associated domain AMD33_RS08545 PF00293 NUDIX domain AMD33_RS08560 PF06737 Transglycosylase-like domain AMD33_RS08565 PF01476 LysM domain AMD33_RS08565 PF06725 3D domain AMD33_RS08570 PF02361 Cobalt transport protein AMD33_RS08575 PF00005 ABC transporter AMD33_RS08580 PF00005 ABC transporter AMD33_RS08585 PF01066 CDP-alcohol phosphatidyltransferase AMD33_RS08610 PF02463 RecF/RecN/SMC N terminal domain AMD33_RS08615 PF00571 CBS domain AMD33_RS08615 PF00478 IMP dehydrogenase / GMP reductase domain AMD33_RS08620 PF00579 tRNA synthetases class I (W and Y) AMD33_RS08625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMD33_RS08625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMD33_RS08630 PF00005 ABC transporter AMD33_RS08630 PF12848 ABC transporter AMD33_RS08660 PF02590 Predicted SPOUT methyltransferase AMD33_RS08665 PF13180 PDZ domain AMD33_RS08670 PF02195 ParB-like nuclease domain AMD33_RS08670 PF17762 HTH domain found in ParB protein AMD33_RS08675 PF00308 Bacterial dnaA protein AMD33_RS08675 PF08299 Bacterial dnaA protein helix-turn-helix AMD33_RS08680 PF00712 DNA polymerase III beta subunit, N-terminal domain AMD33_RS08680 PF02767 DNA polymerase III beta subunit, central domain AMD33_RS08680 PF02768 DNA polymerase III beta subunit, C-terminal domain AMD33_RS08690 PF06071 Protein of unknown function (DUF933) AMD33_RS08690 PF01926 50S ribosome-binding GTPase AMD33_RS08695 PF01195 Peptidyl-tRNA hydrolase AMD33_RS08700 PF03461 TRCF domain AMD33_RS08700 PF17757 UvrB interaction domain AMD33_RS08700 PF00270 DEAD/DEAH box helicase AMD33_RS08700 PF02559 CarD-like/TRCF domain AMD33_RS08700 PF00271 Helicase conserved C-terminal domain AMD33_RS08705 PF01479 S4 domain AMD33_RS08725 PF01171 PP-loop family AMD33_RS08730 PF00156 Phosphoribosyl transferase domain AMD33_RS08735 PF01434 Peptidase family M41 AMD33_RS08735 PF17862 AAA+ lid domain AMD33_RS08735 PF00004 ATPase family associated with various cellular activities (AAA) AMD33_RS08735 PF06480 FtsH Extracellular AMD33_RS08740 PF13683 Integrase core domain AMD33_RS08740 PF01610 Transposase AMD33_RS08885 PF05257 CHAP domain AMD33_RS08885 PF01476 LysM domain AMD33_RS08890 PF14572 Phosphoribosyl synthetase-associated domain AMD33_RS08890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMD33_RS08900 PF00155 Aminotransferase class I and II AMD33_RS08905 PF02565 Recombination protein O C terminal AMD33_RS08905 PF11967 Recombination protein O N terminal AMD33_RS08910 PF02504 Fatty acid synthesis protein AMD33_RS08915 PF00550 Phosphopantetheine attachment site AMD33_RS08920 PF01259 SAICAR synthetase AMD33_RS08925 PF02769 AIR synthase related protein, C-terminal domain AMD33_RS08925 PF00586 AIR synthase related protein, N-terminal domain AMD33_RS08925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMD33_RS08930 PF00156 Phosphoribosyl transferase domain AMD33_RS08930 PF13537 Glutamine amidotransferase domain AMD33_RS08935 PF02769 AIR synthase related protein, C-terminal domain AMD33_RS08935 PF00586 AIR synthase related protein, N-terminal domain AMD33_RS08940 PF00551 Formyl transferase AMD33_RS08945 PF02142 MGS-like domain AMD33_RS08945 PF01808 AICARFT/IMPCHase bienzyme AMD33_RS08960 PF13276 HTH-like domain AMD33_RS08960 PF00665 Integrase core domain AMD33_RS08960 PF13333 Integrase core domain AMD33_RS08965 PF05257 CHAP domain AMD33_RS08965 PF01476 LysM domain AMD33_RS08970 PF02844 Phosphoribosylglycinamide synthetase, N domain AMD33_RS08970 PF02843 Phosphoribosylglycinamide synthetase, C domain AMD33_RS08970 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMD33_RS08975 PF00731 AIR carboxylase AMD33_RS08980 PF02222 ATP-grasp domain AMD33_RS08980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMD33_RS08995 PF00206 Lyase AMD33_RS08995 PF10397 Adenylosuccinate lyase C-terminus AMD33_RS09000 PF05746 DALR anticodon binding domain AMD33_RS09000 PF00750 tRNA synthetases class I (R) AMD33_RS09000 PF03485 Arginyl tRNA synthetase N terminal domain AMD33_RS09005 PF02863 Arginine repressor, C-terminal domain AMD33_RS09005 PF01316 Arginine repressor, DNA binding domain AMD33_RS09010 PF06133 Control of competence regulator ComK, YlbF/YmcA AMD33_RS09015 PF01624 MutS domain I AMD33_RS09015 PF05190 MutS family domain IV AMD33_RS09015 PF05188 MutS domain II AMD33_RS09015 PF00488 MutS domain V AMD33_RS09015 PF05192 MutS domain III AMD33_RS09035 PF08676 MutL C terminal dimerisation domain AMD33_RS09035 PF01119 DNA mismatch repair protein, C-terminal domain AMD33_RS09045 PF07499 RuvA, C-terminal domain AMD33_RS09045 PF01330 RuvA N terminal domain AMD33_RS09050 PF03352 Methyladenine glycosylase AMD33_RS09055 PF00994 Probable molybdopterin binding domain AMD33_RS09055 PF18146 Damage-inducible protein CinA KH domain AMD33_RS09055 PF02464 Competence-damaged protein AMD33_RS09060 PF00154 recA bacterial DNA recombination protein AMD33_RS09065 PF03960 ArsC family AMD33_RS09150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMD33_RS09150 PF00929 Exonuclease AMD33_RS09150 PF02811 PHP domain AMD33_RS09150 PF14579 Helix-hairpin-helix motif AMD33_RS09150 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMD33_RS09150 PF11490 DNA polymerase III polC-type N-terminus II AMD33_RS09150 PF14480 DNA polymerase III polC-type N-terminus I AMD33_RS09155 PF02073 Thermophilic metalloprotease (M29) AMD33_RS09170 PF03358 NADPH-dependent FMN reductase AMD33_RS09195 PF00318 Ribosomal protein S2 AMD33_RS09200 PF00889 Elongation factor TS AMD33_RS09210 PF05848 CtsR N-terminal HTH domain AMD33_RS09210 PF17727 CtsR C-terminal dimerization domain AMD33_RS09215 PF07724 AAA domain (Cdc48 subfamily) AMD33_RS09215 PF17871 AAA lid domain AMD33_RS09215 PF00004 ATPase family associated with various cellular activities (AAA) AMD33_RS09215 PF02861 Clp amino terminal domain, pathogenicity island component AMD33_RS09215 PF10431 C-terminal, D2-small domain, of ClpB protein AMD33_RS09225 PF07943 Penicillin-binding protein 5, C-terminal domain AMD33_RS09225 PF00768 D-alanyl-D-alanine carboxypeptidase AMD33_RS09230 PF03725 3' exoribonuclease family, domain 2 AMD33_RS09230 PF01138 3' exoribonuclease family, domain 1 AMD33_RS09230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMD33_RS09230 PF00575 S1 RNA binding domain AMD33_RS09230 PF00013 KH domain AMD33_RS09240 PF00132 Bacterial transferase hexapeptide (six repeats) AMD33_RS09245 PF01406 tRNA synthetases class I (C) catalytic domain AMD33_RS09245 PF09190 DALR domain AMD33_RS09250 PF00636 Ribonuclease III domain AMD33_RS09265 PF00588 SpoU rRNA Methylase family AMD33_RS09265 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMD33_RS09275 PF02645 Uncharacterised protein, DegV family COG1307 AMD33_RS09290 PF00572 Ribosomal protein L13 AMD33_RS09295 PF00380 Ribosomal protein S9/S16 AMD33_RS09300 PF01610 Transposase AMD33_RS09300 PF13683 Integrase core domain AMD33_RS09320 PF05147 Lanthionine synthetase C-like protein AMD33_RS09350 PF05257 CHAP domain AMD33_RS09350 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMD33_RS09360 PF09587 Bacterial capsule synthesis protein PGA_cap AMD33_RS09370 PF05167 Uncharacterised ACR (DUF711) AMD33_RS09375 PF00300 Histidine phosphatase superfamily (branch 1) AMD33_RS09380 PF02557 D-alanyl-D-alanine carboxypeptidase AMD33_RS09390 PF01628 HrcA protein C terminal domain AMD33_RS09390 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AMD33_RS09395 PF01025 GrpE AMD33_RS09400 PF00012 Hsp70 protein AMD33_RS09405 PF00226 DnaJ domain AMD33_RS09405 PF01556 DnaJ C terminal domain AMD33_RS09405 PF00684 DnaJ central domain AMD33_RS09410 PF01416 tRNA pseudouridine synthase AMD33_RS09415 PF08543 Phosphomethylpyrimidine kinase AMD33_RS09515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD33_RS09545 PF00924 Mechanosensitive ion channel AMD33_RS09550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMD33_RS09550 PF05697 Bacterial trigger factor protein (TF) AMD33_RS09550 PF05698 Bacterial trigger factor protein (TF) C-terminus AMD33_RS09555 PF05066 HB1, ASXL, restriction endonuclease HTH domain AMD33_RS09560 PF00117 Glutamine amidotransferase class-I AMD33_RS09560 PF06418 CTP synthase N-terminus AMD33_RS09570 PF00293 NUDIX domain AMD33_RS09580 PF04452 RNA methyltransferase AMD33_RS09585 PF02872 5'-nucleotidase, C-terminal domain AMD33_RS09585 PF00149 Calcineurin-like phosphoesterase AMD33_RS09595 PF02872 5'-nucleotidase, C-terminal domain AMD33_RS09595 PF00149 Calcineurin-like phosphoesterase AMD33_RS09600 PF00149 Calcineurin-like phosphoesterase AMD33_RS09600 PF02872 5'-nucleotidase, C-terminal domain AMD33_RS09610 PF07972 NrdI Flavodoxin like AMD33_RS09615 PF04607 Region found in RelA / SpoT proteins AMD33_RS09615 PF02824 TGS domain AMD33_RS09615 PF13291 ACT domain AMD33_RS09620 PF02580 D-Tyr-tRNA(Tyr) deacylase AMD33_RS09625 PF13199 Glycosyl hydrolase family 66 AMD33_RS09630 PF13199 Glycosyl hydrolase family 66 AMD33_RS09640 PF00585 C-terminal regulatory domain of Threonine dehydratase AMD33_RS09640 PF00291 Pyridoxal-phosphate dependent enzyme AMD33_RS09645 PF01327 Polypeptide deformylase AMD33_RS09660 PF00312 Ribosomal protein S15 AMD33_RS09670 PF00005 ABC transporter AMD33_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS09680 PF02673 Bacitracin resistance protein BacA AMD33_RS09685 PF05389 Negative regulator of genetic competence (MecA) AMD33_RS09690 PF00953 Glycosyl transferase family 4 AMD33_RS09695 PF00005 ABC transporter AMD33_RS09700 PF01458 Uncharacterized protein family (UPF0051) AMD33_RS09705 PF00266 Aminotransferase class-V AMD33_RS09710 PF01592 NifU-like N terminal domain AMD33_RS09715 PF01458 Uncharacterized protein family (UPF0051) AMD33_RS09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMD33_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component AMD33_RS09745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD33_RS09745 PF00005 ABC transporter AMD33_RS09750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMD33_RS09750 PF00005 ABC transporter AMD33_RS09765 PF01430 Hsp33 protein AMD33_RS09770 PF01207 Dihydrouridine synthase (Dus) AMD33_RS09780 PF01047 MarR family AMD33_RS09785 PF00005 ABC transporter AMD33_RS09790 PF00950 ABC 3 transport family AMD33_RS09800 PF00367 phosphotransferase system, EIIB AMD33_RS09800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS09800 PF02378 Phosphotransferase system, EIIC AMD33_RS09805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS09805 PF00367 phosphotransferase system, EIIB AMD33_RS09805 PF02378 Phosphotransferase system, EIIC AMD33_RS09810 PF02378 Phosphotransferase system, EIIC AMD33_RS09810 PF00367 phosphotransferase system, EIIB AMD33_RS09810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMD33_RS09815 PF03372 Endonuclease/Exonuclease/phosphatase family AMD33_RS09820 PF00342 Phosphoglucose isomerase AMD33_RS09825 PF01709 Transcriptional regulator AMD33_RS09835 PF01255 Putative undecaprenyl diphosphate synthase AMD33_RS09845 PF13180 PDZ domain AMD33_RS09845 PF02163 Peptidase family M50 AMD33_RS09850 PF03129 Anticodon binding domain AMD33_RS09850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMD33_RS09850 PF04073 Aminoacyl-tRNA editing domain