Y1U_RS00005	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
Y1U_RS00010	SM00480	DNA polymerase III beta subunit
Y1U_RS00030	SM00487	DEAD-like helicases superfamily
Y1U_RS00030	SM00490	helicase superfamily c-terminal domain
Y1U_RS00030	SM00982	Y1U_RS00030
Y1U_RS00030	SM01058	CarD-like/TRCF domain
Y1U_RS00035	SM00363	S4 RNA-binding domain
Y1U_RS00055	SM00977	TilS substrate C-terminal domain
Y1U_RS00065	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS00215	SM01400	Y1U_RS00215
Y1U_RS00250	SM01211	Y1U_RS00250
Y1U_RS00270	SM00798	AICARFT/IMPCHase bienzyme
Y1U_RS00270	SM00851	MGS-like domain
Y1U_RS00295	SM01209	Y1U_RS00295
Y1U_RS00295	SM01210	Y1U_RS00295
Y1U_RS00300	SM01001	AIR carboxylase
Y1U_RS00320	SM00998	Adenylosuccinate lyase C-terminus
Y1U_RS00325	SM00836	DALR anticodon binding domain
Y1U_RS00325	SM01016	Arginyl tRNA synthetase N terminal dom
Y1U_RS00340	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Y1U_RS00340	SM00534	ATPase domain of DNA mismatch repair MUTS family
Y1U_RS00350	SM00850	LytTr DNA-binding domain
Y1U_RS00360	SM00853	MutL C terminal dimerisation domain
Y1U_RS00360	SM01340	Y1U_RS00360
Y1U_RS00370	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Y1U_RS00380	SM00852	Probable molybdopterin binding domain
Y1U_RS00385	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS00475	SM00479	Y1U_RS00475
Y1U_RS00475	SM00481	DNA polymerase alpha chain like domain
Y1U_RS00490	SM00347	helix_turn_helix multiple antibiotic resistance protein
Y1U_RS00535	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS00535	SM01086	C-terminal, D2-small domain, of ClpB protein
Y1U_RS00545	SM00936	Penicillin-binding protein 5, C-terminal domain 
Y1U_RS00550	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS00550	SM00322	K homology RNA-binding domain
Y1U_RS00565	SM00840	Y1U_RS00565
Y1U_RS00585	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Y1U_RS00640	SM01260	Y1U_RS00640
Y1U_RS00680	SM00854	Bacterial capsule synthesis protein PGA_cap
Y1U_RS00705	SM00047	Lysozyme subfamily 2
Y1U_RS00725	SM00271	DnaJ molecular chaperone homology domain
Y1U_RS00870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Y1U_RS00870	SM00954	Region found in RelA / SpoT proteins
Y1U_RS00905	SM00100	Cyclic nucleotide-monophosphate binding domain
Y1U_RS00915	SM01387	Y1U_RS00915
Y1U_RS00925	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS00930	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS00950	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01035	SM00347	helix_turn_helix multiple antibiotic resistance protein
Y1U_RS01040	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01085	SM01323	Y1U_RS01085
Y1U_RS01115	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01120	SM00883	Chaperonin 10 Kd subunit
Y1U_RS01185	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Y1U_RS01185	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Y1U_RS01190	SM00014	Acid phosphatase homologues
Y1U_RS01200	SM00420	helix_turn_helix, Deoxyribose operon repressor
Y1U_RS01200	SM01134	Y1U_RS01200
Y1U_RS01215	SM00347	helix_turn_helix multiple antibiotic resistance protein
Y1U_RS01280	SM00981	Y1U_RS01280
Y1U_RS01290	SM00487	DEAD-like helicases superfamily
Y1U_RS01290	SM00490	helicase superfamily c-terminal domain
Y1U_RS01340	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Y1U_RS01395	SM00116	Domain in cystathionine beta-synthase and other proteins.
Y1U_RS01415	SM00363	S4 RNA-binding domain
Y1U_RS01420	SM01234	Y1U_RS01420
Y1U_RS01445	SM00014	Acid phosphatase homologues
Y1U_RS01450	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS01510	SM00988	UreE urease accessory protein, N-terminal domain
Y1U_RS01540	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01545	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS01555	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Y1U_RS01570	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS01585	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01585	SM00930	Y1U_RS01585
Y1U_RS01610	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01620	SM00861	Transketolase, pyrimidine binding domain
Y1U_RS01645	SM00448	cheY-homologous receiver domain
Y1U_RS01645	SM00862	Transcriptional regulatory protein, C terminal
Y1U_RS01650	SM00387	Histidine kinase-like ATPases
Y1U_RS01650	SM00388	His Kinase A (phosphoacceptor) domain
Y1U_RS01755	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS01755	SM00322	K homology RNA-binding domain
Y1U_RS01860	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01865	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS01870	SM00116	Domain in cystathionine beta-synthase and other proteins.
Y1U_RS01890	SM00487	DEAD-like helicases superfamily
Y1U_RS01890	SM00490	helicase superfamily c-terminal domain
Y1U_RS01955	SM01131	Y1U_RS01955
Y1U_RS02000	SM00347	helix_turn_helix multiple antibiotic resistance protein
Y1U_RS02020	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Y1U_RS02025	SM00822	Y1U_RS02025
Y1U_RS02030	SM00825	Beta-ketoacyl synthase
Y1U_RS02045	SM00878	Biotin carboxylase C-terminal domain
Y1U_RS02085	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02095	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS02110	SM00322	K homology RNA-binding domain
Y1U_RS02110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Y1U_RS02120	SM00420	helix_turn_helix, Deoxyribose operon repressor
Y1U_RS02120	SM01134	Y1U_RS02120
Y1U_RS02155	SM00981	Y1U_RS02155
Y1U_RS02215	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02235	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Y1U_RS02245	SM00347	helix_turn_helix multiple antibiotic resistance protein
Y1U_RS02250	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02255	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02290	SM00257	Lysin motif
Y1U_RS02355	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Y1U_RS02370	SM00287	Bacterial SH3 domain homologues
Y1U_RS02385	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Y1U_RS02485	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02540	SM00938	Nitrogen regulatory protein P-II
Y1U_RS02545	SM00047	Lysozyme subfamily 2
Y1U_RS02665	SM00363	S4 RNA-binding domain
Y1U_RS02685	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Y1U_RS02690	SM00851	MGS-like domain
Y1U_RS02690	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Y1U_RS02690	SM01209	Y1U_RS02690
Y1U_RS02725	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02730	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02750	SM00448	cheY-homologous receiver domain
Y1U_RS02750	SM00850	LytTr DNA-binding domain
Y1U_RS02760	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02770	SM00450	Rhodanese Homology Domain
Y1U_RS02775	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS02795	SM00363	S4 RNA-binding domain
Y1U_RS02890	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Y1U_RS02945	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS02945	SM00994	ClpX C4-type zinc finger
Y1U_RS02945	SM01086	C-terminal, D2-small domain, of ClpB protein
Y1U_RS02975	SM01207	Y1U_RS02975
Y1U_RS02980	SM00387	Histidine kinase-like ATPases
Y1U_RS02980	SM00433	TopoisomeraseII
Y1U_RS02985	SM00434	DNA Topoisomerase IV
Y1U_RS03010	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS03055	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS03055	SM01086	C-terminal, D2-small domain, of ClpB protein
Y1U_RS03075	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS03080	SM00899	Y1U_RS03080
Y1U_RS03130	SM00493	Y1U_RS03130
Y1U_RS03160	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Y1U_RS03160	SM01232	Y1U_RS03160
Y1U_RS03180	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS03180	SM00955	Y1U_RS03180
Y1U_RS03195	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS03205	SM00354	helix_turn _helix lactose operon repressor
Y1U_RS03225	SM01192	Y1U_RS03225
Y1U_RS03225	SM01193	Y1U_RS03225
Y1U_RS03375	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS03375	SM00732	Likely ribonuclease with RNase H fold.
Y1U_RS03380	SM00731	SprT homologues.
Y1U_RS03455	SM00927	DNA mismatch repair enzyme MutH
Y1U_RS03475	SM00257	Lysin motif
Y1U_RS03490	SM00855	Phosphoglycerate mutase family
Y1U_RS03530	SM00487	DEAD-like helicases superfamily
Y1U_RS03555	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS03640	SM00838	Elongation factor G C-terminus
Y1U_RS03665	SM00842	Cell division protein FtsA
Y1U_RS03670	SM00864	Tubulin/FtsZ family, GTPase domain
Y1U_RS03670	SM00865	Tubulin/FtsZ family, C-terminal domain
Y1U_RS03690	SM00363	S4 RNA-binding domain
Y1U_RS03750	SM00937	Y1U_RS03750
Y1U_RS03780	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS03785	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS03875	SM00942	Primase C terminal 1 (PriCT-1)
Y1U_RS03905	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS03910	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS03990	SM00892	DNA/RNA non-specific endonuclease
Y1U_RS04005	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS04010	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS04015	SM00448	cheY-homologous receiver domain
Y1U_RS04015	SM00862	Transcriptional regulatory protein, C terminal
Y1U_RS04020	SM00091	PAS domain
Y1U_RS04020	SM00387	Histidine kinase-like ATPases
Y1U_RS04020	SM00388	His Kinase A (phosphoacceptor) domain
Y1U_RS04025	SM00849	Metallo-beta-lactamase superfamily
Y1U_RS04055	SM00831	Cation transporter/ATPase, N-terminus
Y1U_RS04075	SM00937	Y1U_RS04075
Y1U_RS04080	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS04100	SM00028	Tetratricopeptide repeats
Y1U_RS04145	SM01321	Y1U_RS04145
Y1U_RS04170	SM00986	Uracil DNA glycosylase superfamily
Y1U_RS04170	SM00987	UreE urease accessory protein, C-terminal domain 
Y1U_RS04445	SM00986	Uracil DNA glycosylase superfamily
Y1U_RS04445	SM00987	UreE urease accessory protein, C-terminal domain 
Y1U_RS04480	SM00861	Transketolase, pyrimidine binding domain
Y1U_RS04605	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS04610	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS04650	SM00904	Riboflavin kinase
Y1U_RS04740	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS04765	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Y1U_RS04965	SM00729	Elongator protein 3, MiaB family, Radical SAM
Y1U_RS04975	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS04980	SM00838	Elongation factor G C-terminus
Y1U_RS04990	SM00450	Rhodanese Homology Domain
Y1U_RS04995	SM00562	Y1U_RS04995
Y1U_RS05010	SM00387	Histidine kinase-like ATPases
Y1U_RS05010	SM00388	His Kinase A (phosphoacceptor) domain
Y1U_RS05015	SM00448	cheY-homologous receiver domain
Y1U_RS05015	SM00862	Transcriptional regulatory protein, C terminal
Y1U_RS05025	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Y1U_RS05025	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Y1U_RS05025	SM00493	Y1U_RS05025
Y1U_RS05050	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS05065	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS05065	SM00962	SRP54-type protein, GTPase domain
Y1U_RS05065	SM00963	SRP54-type protein, helical bundle domain
Y1U_RS05075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Y1U_RS05075	SM00866	Y1U_RS05075
Y1U_RS05105	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS05110	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS05140	SM00047	Lysozyme subfamily 2
Y1U_RS05235	SM00357	Cold shock protein domain
Y1U_RS05240	SM00357	Cold shock protein domain
Y1U_RS05340	SM00479	Y1U_RS05340
Y1U_RS05340	SM00487	DEAD-like helicases superfamily
Y1U_RS05340	SM00491	Y1U_RS05340
Y1U_RS05345	SM00849	Metallo-beta-lactamase superfamily
Y1U_RS05360	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS05455	SM00387	Histidine kinase-like ATPases
Y1U_RS05530	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS05560	SM00830	Chorismate mutase type II
Y1U_RS05590	SM00849	Metallo-beta-lactamase superfamily
Y1U_RS05595	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS05660	SM00481	DNA polymerase alpha chain like domain
Y1U_RS05685	SM01329	Y1U_RS05685
Y1U_RS05690	SM00917	LeuA allosteric (dimerisation) domain
Y1U_RS05695	SM00855	Phosphoglycerate mutase family
Y1U_RS05710	SM00411	bacterial (prokaryotic) histone like domain
Y1U_RS05740	SM00363	S4 RNA-binding domain
Y1U_RS05765	SM00478	endonuclease III
Y1U_RS05765	SM00525	Y1U_RS05765
Y1U_RS05920	SM00729	Elongator protein 3, MiaB family, Radical SAM
Y1U_RS06025	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06035	SM00487	DEAD-like helicases superfamily
Y1U_RS06035	SM00490	helicase superfamily c-terminal domain
Y1U_RS06065	SM01329	Y1U_RS06065
Y1U_RS06125	SM00434	DNA Topoisomerase IV
Y1U_RS06140	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Y1U_RS06190	SM00873	B3/4 domain
Y1U_RS06190	SM00874	tRNA synthetase B5 domain
Y1U_RS06190	SM00896	Ferredoxin-fold anticodon binding domain
Y1U_RS06210	SM00968	SMC proteins Flexible Hinge Domain
Y1U_RS06215	SM00358	Double-stranded RNA binding motif
Y1U_RS06215	SM00535	Ribonuclease III family
Y1U_RS06220	SM01130	Y1U_RS06220
Y1U_RS06225	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Y1U_RS06245	SM00155	Phospholipase D. Active site motifs.
Y1U_RS06250	SM00465	GIY-YIG type nucleases (URI domain)
Y1U_RS06265	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06335	SM00421	helix_turn_helix, Lux Regulon
Y1U_RS06335	SM00448	cheY-homologous receiver domain
Y1U_RS06350	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06380	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06405	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06410	SM00387	Histidine kinase-like ATPases
Y1U_RS06415	SM00448	cheY-homologous receiver domain
Y1U_RS06415	SM00862	Transcriptional regulatory protein, C terminal
Y1U_RS06530	SM00448	cheY-homologous receiver domain
Y1U_RS06590	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06625	SM00729	Elongator protein 3, MiaB family, Radical SAM
Y1U_RS06630	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS06660	SM01038	Beta galactosidase small chain
Y1U_RS06690	SM00354	helix_turn _helix lactose operon repressor
Y1U_RS06740	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06740	SM00843	Y1U_RS06740
Y1U_RS06770	SM00421	helix_turn_helix, Lux Regulon
Y1U_RS06770	SM00448	cheY-homologous receiver domain
Y1U_RS06775	SM00387	Histidine kinase-like ATPases
Y1U_RS06785	SM00220	Serine/Threonine protein kinases, catalytic domain
Y1U_RS06785	SM00740	Y1U_RS06785
Y1U_RS06790	SM00331	Sigma factor PP2C-like phosphatases
Y1U_RS06790	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Y1U_RS06805	SM00487	DEAD-like helicases superfamily
Y1U_RS06805	SM00490	helicase superfamily c-terminal domain
Y1U_RS06810	SM01409	Y1U_RS06810
Y1U_RS06815	SM00072	Guanylate kinase homologues.
Y1U_RS06820	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06820	SM00962	SRP54-type protein, GTPase domain
Y1U_RS06820	SM00963	SRP54-type protein, helical bundle domain
Y1U_RS06835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Y1U_RS06840	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06850	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06855	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS06935	SM00954	Region found in RelA / SpoT proteins
Y1U_RS06940	SM01118	Y1U_RS06940
Y1U_RS06945	SM01400	Y1U_RS06945
Y1U_RS06960	SM00881	CoA binding domain
Y1U_RS06985	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07055	SM00400	zinc finger
Y1U_RS07055	SM00493	Y1U_RS07055
Y1U_RS07070	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07070	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Y1U_RS07080	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07080	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Y1U_RS07085	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07085	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Y1U_RS07095	SM00487	DEAD-like helicases superfamily
Y1U_RS07095	SM00490	helicase superfamily c-terminal domain
Y1U_RS07115	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07115	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Y1U_RS07120	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07135	SM00363	S4 RNA-binding domain
Y1U_RS07205	SM00387	Histidine kinase-like ATPases
Y1U_RS07205	SM00433	TopoisomeraseII
Y1U_RS07290	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07305	SM00905	Dihydroneopterin aldolase
Y1U_RS07310	SM00642	Alpha-amylase domain
Y1U_RS07370	SM00046	Diacylglycerol kinase catalytic domain (presumed)
Y1U_RS07375	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Y1U_RS07375	SM00292	breast cancer carboxy-terminal domain
Y1U_RS07375	SM00532	Ligase N family
Y1U_RS07395	SM00116	Domain in cystathionine beta-synthase and other proteins.
Y1U_RS07410	SM00849	Metallo-beta-lactamase superfamily
Y1U_RS07415	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Y1U_RS07420	SM00563	Phosphate acyltransferases
Y1U_RS07440	SM00487	DEAD-like helicases superfamily
Y1U_RS07440	SM00490	helicase superfamily c-terminal domain
Y1U_RS07460	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS07495	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07495	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Y1U_RS07500	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07570	SM00830	Chorismate mutase type II
Y1U_RS07600	SM00422	helix_turn_helix, mercury resistance
Y1U_RS07605	SM00479	Y1U_RS07605
Y1U_RS07650	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07675	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07675	SM01086	C-terminal, D2-small domain, of ClpB protein
Y1U_RS07695	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Y1U_RS07705	SM01103	Y1U_RS07705
Y1U_RS07730	SM00845	GatB domain
Y1U_RS07800	SM01091	Transporter associated domain
Y1U_RS07805	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07825	SM00729	Elongator protein 3, MiaB family, Radical SAM
Y1U_RS07855	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07865	SM00062	Bacterial periplasmic substrate-binding proteins
Y1U_RS07885	SM01057	Eukaryotic-type carbonic anhydrase
Y1U_RS07910	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS07935	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
Y1U_RS07935	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Y1U_RS08000	SM00850	LytTr DNA-binding domain
Y1U_RS08020	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08025	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08030	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08060	SM00487	DEAD-like helicases superfamily
Y1U_RS08060	SM00490	helicase superfamily c-terminal domain
Y1U_RS08070	SM00740	Y1U_RS08070
Y1U_RS08120	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08145	SM00850	LytTr DNA-binding domain
Y1U_RS08170	SM00870	Y1U_RS08170
Y1U_RS08175	SM00487	DEAD-like helicases superfamily
Y1U_RS08175	SM00490	helicase superfamily c-terminal domain
Y1U_RS08180	SM01005	Alanine racemase, C-terminal domain
Y1U_RS08200	SM00957	SecA DEAD-like domain
Y1U_RS08200	SM00958	SecA preprotein cross-linking domain
Y1U_RS08225	SM00640	Glycosyl hydrolases family 32
Y1U_RS08230	SM00354	helix_turn _helix lactose operon repressor
Y1U_RS08245	SM00841	Elongation factor P, C-terminal
Y1U_RS08245	SM01185	Y1U_RS08245
Y1U_RS08285	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08325	SM00478	endonuclease III
Y1U_RS08345	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Y1U_RS08345	SM00474	3'-5' exonuclease
Y1U_RS08345	SM00475	5'-3' exonuclease
Y1U_RS08345	SM00482	DNA polymerase A domain
Y1U_RS08350	SM00463	Small MutS-related domain
Y1U_RS08350	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Y1U_RS08350	SM00534	ATPase domain of DNA mismatch repair MUTS family
Y1U_RS08375	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08410	SM00849	Metallo-beta-lactamase superfamily
Y1U_RS08420	SM01230	Y1U_RS08420
Y1U_RS08425	SM00422	helix_turn_helix, mercury resistance
Y1U_RS08450	SM01321	Y1U_RS08450
Y1U_RS08475	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Y1U_RS08480	SM00838	Elongation factor G C-terminus
Y1U_RS08480	SM00889	Elongation factor G, domain IV
Y1U_RS08515	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
Y1U_RS08535	SM00650	Ribosomal RNA adenine dimethylases
Y1U_RS08540	SM00493	Y1U_RS08540
Y1U_RS08550	SM00881	CoA binding domain
Y1U_RS08560	SM00506	Appr-1"-p processing enzyme
Y1U_RS08605	SM01321	Y1U_RS08605
Y1U_RS08615	SM00393	Putative single-stranded nucleic acids-binding domain
Y1U_RS08615	SM01245	Y1U_RS08615
Y1U_RS08655	SM00649	Ribosomal protein L11/L12
Y1U_RS08665	SM00947	Carbonic anhydrase
Y1U_RS08680	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS08825	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS08880	SM00663	RNA polymerase I subunit A N-terminus
Y1U_RS08895	SM00363	S4 RNA-binding domain
Y1U_RS08920	SM01120	Y1U_RS08920
Y1U_RS08920	SM01121	Y1U_RS08920
Y1U_RS08995	SM00866	Y1U_RS08995
Y1U_RS09085	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS09135	SM00662	RNA polymerases D
Y1U_RS09150	SM00316	Ribosomal protein S1-like RNA-binding domain
Y1U_RS09205	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Y1U_RS09210	SM01374	Y1U_RS09210
Y1U_RS09230	SM00322	K homology RNA-binding domain
Y1U_RS09245	SM01382	Y1U_RS09245
Y1U_RS09245	SM01383	Y1U_RS09245
Y1U_RS09265	SM01403	Y1U_RS09265
Y1U_RS09270	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09280	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Y1U_RS09285	SM00226	Low molecular weight phosphatase family
Y1U_RS09290	SM00788	Adenylosuccinate synthetase
Y1U_RS09315	SM00530	Helix-turn-helix XRE-family like proteins 
Y1U_RS09320	SM00220	Serine/Threonine protein kinases, catalytic domain
Y1U_RS09325	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09340	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09360	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09375	SM00732	Likely ribonuclease with RNase H fold.
Y1U_RS09525	SM00363	S4 RNA-binding domain
Y1U_RS09525	SM01390	Y1U_RS09525
Y1U_RS09550	SM01228	Y1U_RS09550
Y1U_RS09575	SM00257	Lysin motif
Y1U_RS09585	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09590	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09625	SM00116	Domain in cystathionine beta-synthase and other proteins.
Y1U_RS09625	SM01240	Y1U_RS09625
Y1U_RS09640	SM00382	ATPases associated with a variety of cellular activities
Y1U_RS09675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Y1U_RS09680	SM00470	ParB-like nuclease domain
Y1U_RS09695	SM00855	Phosphoglycerate mutase family
