locus-tag class description SRT_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SRT_RS00005 PF00308 Bacterial dnaA protein SRT_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SRT_RS00010 PF02767 DNA polymerase III beta subunit, central domain SRT_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SRT_RS00020 PF01381 Helix-turn-helix SRT_RS00025 PF06071 Protein of unknown function (DUF933) SRT_RS00025 PF01926 50S ribosome-binding GTPase SRT_RS00030 PF01195 Peptidyl-tRNA hydrolase SRT_RS00040 PF01479 S4 domain SRT_RS00060 PF01171 PP-loop family SRT_RS00065 PF00156 Phosphoribosyl transferase domain SRT_RS00070 PF01434 Peptidase family M41 SRT_RS00070 PF06480 FtsH Extracellular SRT_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) SRT_RS00070 PF17862 AAA+ lid domain SRT_RS00075 PF13520 Amino acid permease SRT_RS00185 PF04085 rod shape-determining protein MreC SRT_RS00195 PF05257 CHAP domain SRT_RS00195 PF01476 LysM domain SRT_RS00205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SRT_RS00205 PF14572 Phosphoribosyl synthetase-associated domain SRT_RS00210 PF00155 Aminotransferase class I and II SRT_RS00220 PF02504 Fatty acid synthesis protein SRT_RS00225 PF00550 Phosphopantetheine attachment site SRT_RS00260 PF00005 ABC transporter SRT_RS00275 PF00664 ABC transporter transmembrane region SRT_RS00275 PF00005 ABC transporter SRT_RS00275 PF03412 Peptidase C39 family SRT_RS00290 PF01259 SAICAR synthetase SRT_RS00300 PF00156 Phosphoribosyl transferase domain SRT_RS00310 PF02769 AIR synthase related protein, C-terminal domain SRT_RS00310 PF00586 AIR synthase related protein, N-terminal domain SRT_RS00315 PF00551 Formyl transferase SRT_RS00325 PF02142 MGS-like domain SRT_RS00325 PF01808 AICARFT/IMPCHase bienzyme SRT_RS00355 PF02844 Phosphoribosylglycinamide synthetase, N domain SRT_RS00355 PF02843 Phosphoribosylglycinamide synthetase, C domain SRT_RS00355 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SRT_RS00365 PF00731 AIR carboxylase SRT_RS00370 PF02222 ATP-grasp domain SRT_RS00370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRT_RS00370 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SRT_RS00380 PF01177 Asp/Glu/Hydantoin racemase SRT_RS00395 PF10397 Adenylosuccinate lyase C-terminus SRT_RS00395 PF00206 Lyase SRT_RS00415 PF17864 RuvB AAA lid domain SRT_RS00415 PF05496 Holliday junction DNA helicase RuvB P-loop domain SRT_RS00415 PF05491 RuvB C-terminal winged helix domain SRT_RS00420 PF01451 Low molecular weight phosphotyrosine protein phosphatase SRT_RS00430 PF01757 Acyltransferase family SRT_RS00445 PF00291 Pyridoxal-phosphate dependent enzyme SRT_RS00445 PF14821 Threonine synthase N terminus SRT_RS00455 PF01554 MatE SRT_RS00465 PF05167 Uncharacterised ACR (DUF711) SRT_RS00475 PF02557 D-alanyl-D-alanine carboxypeptidase SRT_RS00480 PF13457 GW (Gly-Tryp) dipeptide domain SRT_RS00480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SRT_RS00495 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SRT_RS00495 PF01628 HrcA protein C terminal domain SRT_RS00500 PF01025 GrpE SRT_RS00510 PF00012 Hsp70 protein SRT_RS00520 PF01416 tRNA pseudouridine synthase SRT_RS00525 PF08543 Phosphomethylpyrimidine kinase SRT_RS00535 PF04260 Protein of unknown function (DUF436) SRT_RS00540 PF00924 Mechanosensitive ion channel SRT_RS00560 PF00664 ABC transporter transmembrane region SRT_RS00560 PF00005 ABC transporter SRT_RS00570 PF00005 ABC transporter SRT_RS00575 PF00005 ABC transporter SRT_RS00600 PF05066 HB1, ASXL, restriction endonuclease HTH domain SRT_RS00605 PF00117 Glutamine amidotransferase class-I SRT_RS00605 PF06418 CTP synthase N-terminus SRT_RS00650 PF01381 Helix-turn-helix SRT_RS00665 PF00294 pfkB family carbohydrate kinase SRT_RS00670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS00670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS00675 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS00675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS00680 PF01791 DeoC/LacD family aldolase SRT_RS00690 PF00756 Putative esterase SRT_RS00695 PF00107 Zinc-binding dehydrogenase SRT_RS00695 PF08240 Alcohol dehydrogenase GroES-like domain SRT_RS00705 PF00830 Ribosomal L28 family SRT_RS00710 PF01554 MatE SRT_RS00715 PF11490 DNA polymerase III polC-type N-terminus II SRT_RS00715 PF07733 Bacterial DNA polymerase III alpha NTPase domain SRT_RS00715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SRT_RS00715 PF02811 PHP domain SRT_RS00715 PF00929 Exonuclease SRT_RS00715 PF14480 DNA polymerase III polC-type N-terminus I SRT_RS00715 PF14579 Helix-hairpin-helix motif SRT_RS00720 PF01047 MarR family SRT_RS00725 PF02525 Flavodoxin-like fold SRT_RS00730 PF00676 Dehydrogenase E1 component SRT_RS00735 PF02780 Transketolase, C-terminal domain SRT_RS00735 PF02779 Transketolase, pyrimidine binding domain SRT_RS00735 PF00364 Biotin-requiring enzyme SRT_RS00740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SRT_RS00740 PF00364 Biotin-requiring enzyme SRT_RS00740 PF02817 e3 binding domain SRT_RS00750 PF03099 Biotin/lipoate A/B protein ligase family SRT_RS00750 PF10437 Bacterial lipoate protein ligase C-terminus SRT_RS00755 PF07687 Peptidase dimerisation domain SRT_RS00755 PF01546 Peptidase family M20/M25/M40 SRT_RS00760 PF07690 Major Facilitator Superfamily SRT_RS00765 PF18665 Tetracyclin repressor-like, C-terminal domain SRT_RS00765 PF00440 Bacterial regulatory proteins, tetR family SRT_RS00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS00770 PF03466 LysR substrate binding domain SRT_RS00780 PF00390 Malic enzyme, N-terminal domain SRT_RS00780 PF03949 Malic enzyme, NAD binding domain SRT_RS00785 PF03547 Membrane transport protein SRT_RS00790 PF00190 Cupin SRT_RS00795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRT_RS00795 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS00805 PF01327 Polypeptide deformylase SRT_RS00810 PF00027 Cyclic nucleotide-binding domain SRT_RS00820 PF00465 Iron-containing alcohol dehydrogenase SRT_RS00820 PF00171 Aldehyde dehydrogenase family SRT_RS00830 PF00106 short chain dehydrogenase SRT_RS00835 PF12833 Helix-turn-helix domain SRT_RS00835 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SRT_RS00855 PF00132 Bacterial transferase hexapeptide (six repeats) SRT_RS00860 PF01406 tRNA synthetases class I (C) catalytic domain SRT_RS00860 PF09190 DALR domain SRT_RS00865 PF00636 Ribonuclease III domain SRT_RS00880 PF00588 SpoU rRNA Methylase family SRT_RS00880 PF08032 RNA 2'-O ribose methyltransferase substrate binding SRT_RS00885 PF02645 Uncharacterised protein, DegV family COG1307 SRT_RS00900 PF01381 Helix-turn-helix SRT_RS00910 PF00572 Ribosomal protein L13 SRT_RS00915 PF00380 Ribosomal protein S9/S16 SRT_RS00935 PF02378 Phosphotransferase system, EIIC SRT_RS00945 PF03358 NADPH-dependent FMN reductase SRT_RS00945 PF04205 FMN-binding domain SRT_RS00945 PF00890 FAD binding domain SRT_RS00950 PF04205 FMN-binding domain SRT_RS00950 PF03358 NADPH-dependent FMN reductase SRT_RS00950 PF00890 FAD binding domain SRT_RS00960 PF00005 ABC transporter SRT_RS00965 PF00950 ABC 3 transport family SRT_RS00970 PF01297 Zinc-uptake complex component A periplasmic SRT_RS00985 PF01207 Dihydrouridine synthase (Dus) SRT_RS00990 PF01430 Hsp33 protein SRT_RS01035 PF01047 MarR family SRT_RS01040 PF00005 ABC transporter SRT_RS01045 PF00950 ABC 3 transport family SRT_RS01050 PF00579 tRNA synthetases class I (W and Y) SRT_RS01050 PF01479 S4 domain SRT_RS01055 PF00912 Transglycosylase SRT_RS01055 PF00905 Penicillin binding protein transpeptidase domain SRT_RS01060 PF04560 RNA polymerase Rpb2, domain 7 SRT_RS01060 PF04565 RNA polymerase Rpb2, domain 3 SRT_RS01060 PF10385 RNA polymerase beta subunit external 1 domain SRT_RS01060 PF04561 RNA polymerase Rpb2, domain 2 SRT_RS01060 PF04563 RNA polymerase beta subunit SRT_RS01060 PF00562 RNA polymerase Rpb2, domain 6 SRT_RS01065 PF05000 RNA polymerase Rpb1, domain 4 SRT_RS01065 PF04997 RNA polymerase Rpb1, domain 1 SRT_RS01065 PF00623 RNA polymerase Rpb1, domain 2 SRT_RS01065 PF04983 RNA polymerase Rpb1, domain 3 SRT_RS01065 PF04998 RNA polymerase Rpb1, domain 5 SRT_RS01080 PF00482 Type II secretion system (T2SS), protein F SRT_RS01115 PF00871 Acetokinase family SRT_RS01135 PF03807 NADP oxidoreductase coenzyme F420-dependent SRT_RS01135 PF14748 Pyrroline-5-carboxylate reductase dimerisation SRT_RS01150 PF00085 Thioredoxin SRT_RS01155 PF14794 Domain of unknown function (DUF4479) SRT_RS01155 PF01588 Putative tRNA binding domain SRT_RS01170 PF00436 Single-strand binding protein family SRT_RS01185 PF00196 Bacterial regulatory proteins, luxR family SRT_RS01185 PF00072 Response regulator receiver domain SRT_RS01210 PF03609 PTS system sorbose-specific iic component SRT_RS01215 PF03613 PTS system mannose/fructose/sorbose family IID component SRT_RS01225 PF00166 Chaperonin 10 Kd subunit SRT_RS01230 PF00118 TCP-1/cpn60 chaperonin family SRT_RS01245 PF00912 Transglycosylase SRT_RS01245 PF00905 Penicillin binding protein transpeptidase domain SRT_RS01250 PF00471 Ribosomal protein L33 SRT_RS01260 PF00467 KOW motif SRT_RS01260 PF02357 Transcription termination factor nusG SRT_RS01275 PF09334 tRNA synthetases class I (M) SRT_RS01275 PF13603 Leucyl-tRNA synthetase, Domain 2 SRT_RS01275 PF08264 Anticodon-binding domain of tRNA SRT_RS01275 PF00133 tRNA synthetases class I (I, L, M and V) SRT_RS01295 PF00005 ABC transporter SRT_RS01295 PF09383 NIL domain SRT_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS01305 PF00795 Carbon-nitrogen hydrolase SRT_RS01315 PF07155 ECF-type riboflavin transporter, S component SRT_RS01320 PF12558 ATP-binding cassette cobalt transporter SRT_RS01320 PF00005 ABC transporter SRT_RS01330 PF02527 rRNA small subunit methyltransferase G SRT_RS01335 PF04011 LemA family SRT_RS01340 PF01435 Peptidase family M48 SRT_RS01350 PF00005 ABC transporter SRT_RS01370 PF03477 ATP cone domain SRT_RS01380 PF01695 IstB-like ATP binding protein SRT_RS01380 PF07319 Primosomal protein DnaI N-terminus SRT_RS01385 PF01926 50S ribosome-binding GTPase SRT_RS01385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SRT_RS01395 PF09335 SNARE associated Golgi protein SRT_RS01405 PF17203 Single cache domain 3 SRT_RS01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS01405 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SRT_RS01405 PF00989 PAS fold SRT_RS01460 PF02403 Seryl-tRNA synthetase N-terminal domain SRT_RS01460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRT_RS01490 PF03613 PTS system mannose/fructose/sorbose family IID component SRT_RS01495 PF03609 PTS system sorbose-specific iic component SRT_RS01500 PF03610 PTS system fructose IIA component SRT_RS01500 PF03830 PTS system sorbose subfamily IIB component SRT_RS01510 PF13538 UvrD-like helicase C-terminal domain SRT_RS01510 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SRT_RS01510 PF14490 Helix-hairpin-helix containing domain SRT_RS01520 PF01351 Ribonuclease HII SRT_RS01520 PF11858 Domain of unknown function (DUF3378) SRT_RS01535 PF01713 Smr domain SRT_RS01535 PF00488 MutS domain V SRT_RS01540 PF00085 Thioredoxin SRT_RS01545 PF13823 Alcohol dehydrogenase GroES-associated SRT_RS01545 PF08240 Alcohol dehydrogenase GroES-like domain SRT_RS01545 PF00107 Zinc-binding dehydrogenase SRT_RS01550 PF00730 HhH-GPD superfamily base excision DNA repair protein SRT_RS01550 PF14815 NUDIX domain SRT_RS01560 PF01250 Ribosomal protein S6 SRT_RS01565 PF00436 Single-strand binding protein family SRT_RS01570 PF01084 Ribosomal protein S18 SRT_RS01610 PF17760 UvrA interaction domain SRT_RS01610 PF17755 UvrA DNA-binding domain SRT_RS01610 PF00005 ABC transporter SRT_RS01615 PF01321 Creatinase/Prolidase N-terminal domain SRT_RS01615 PF00557 Metallopeptidase family M24 SRT_RS01620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SRT_RS01630 PF01132 Elongation factor P (EF-P) OB domain SRT_RS01630 PF08207 Elongation factor P (EF-P) KOW-like domain SRT_RS01630 PF09285 Elongation factor P, C-terminal SRT_RS01635 PF03780 Asp23 family, cell envelope-related function SRT_RS01645 PF00356 Bacterial regulatory proteins, lacI family SRT_RS01650 PF08244 Glycosyl hydrolases family 32 C terminal SRT_RS01650 PF00251 Glycosyl hydrolases family 32 N-terminal domain SRT_RS01660 PF00480 ROK family SRT_RS01665 PF01238 Phosphomannose isomerase type I SRT_RS01670 PF01043 SecA preprotein cross-linking domain SRT_RS01670 PF07517 SecA DEAD-like domain SRT_RS01670 PF07516 SecA Wing and Scaffold domain SRT_RS01670 PF02810 SEC-C motif SRT_RS01675 PF00793 DAHP synthetase I family SRT_RS01680 PF00793 DAHP synthetase I family SRT_RS01690 PF00842 Alanine racemase, C-terminal domain SRT_RS01690 PF01168 Alanine racemase, N-terminal domain SRT_RS01695 PF00270 DEAD/DEAH box helicase SRT_RS01695 PF17191 RecG wedge domain SRT_RS01695 PF00271 Helicase conserved C-terminal domain SRT_RS01705 PF17763 Glutaminase/Asparaginase C-terminal domain SRT_RS01705 PF00710 Asparaginase, N-terminal SRT_RS01715 PF00582 Universal stress protein family SRT_RS01720 PF02632 BioY family SRT_RS01725 PF00155 Aminotransferase class I and II SRT_RS01730 PF06018 CodY GAF-like domain SRT_RS01730 PF08222 CodY helix-turn-helix domain SRT_RS01735 PF00857 Isochorismatase family SRT_RS01740 PF02938 GAD domain SRT_RS01740 PF00152 tRNA synthetases class II (D, K and N) SRT_RS01740 PF01336 OB-fold nucleic acid binding domain SRT_RS01745 PF02686 Glu-tRNAGln amidotransferase C subunit SRT_RS01750 PF01425 Amidase SRT_RS01755 PF02934 GatB/GatE catalytic domain SRT_RS01755 PF02637 GatB domain SRT_RS01760 PF00892 EamA-like transporter family SRT_RS01765 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SRT_RS01770 PF00440 Bacterial regulatory proteins, tetR family SRT_RS01790 PF01926 50S ribosome-binding GTPase SRT_RS01795 PF01985 CRS1 / YhbY (CRM) domain SRT_RS01800 PF01467 Cytidylyltransferase-like SRT_RS01805 PF01966 HD domain SRT_RS01815 PF13649 Methyltransferase domain SRT_RS01830 PF05636 HIGH Nucleotidyl Transferase SRT_RS01845 PF07739 TipAS antibiotic-recognition domain SRT_RS01845 PF13411 MerR HTH family regulatory protein SRT_RS01850 PF01709 Transcriptional regulator SRT_RS01860 PF02699 Preprotein translocase subunit SRT_RS01870 PF01255 Putative undecaprenyl diphosphate synthase SRT_RS01885 PF03129 Anticodon binding domain SRT_RS01885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRT_RS01885 PF04073 Aminoacyl-tRNA editing domain SRT_RS01940 PF04167 Protein of unknown function (DUF402) SRT_RS01950 PF05958 tRNA (Uracil-5-)-methyltransferase SRT_RS01950 PF01938 TRAM domain SRT_RS01955 PF07972 NrdI Flavodoxin like SRT_RS01995 PF00117 Glutamine amidotransferase class-I SRT_RS01995 PF03352 Methyladenine glycosylase SRT_RS01995 PF13673 Acetyltransferase (GNAT) domain SRT_RS01995 PF13302 Acetyltransferase (GNAT) domain SRT_RS01995 PF00958 GMP synthase C terminal domain SRT_RS02010 PF08264 Anticodon-binding domain of tRNA SRT_RS02010 PF10458 Valyl tRNA synthetase tRNA binding arm SRT_RS02010 PF00133 tRNA synthetases class I (I, L, M and V) SRT_RS02095 PF13419 Haloacid dehalogenase-like hydrolase SRT_RS02100 PF00378 Enoyl-CoA hydratase/isomerase SRT_RS02105 PF01047 MarR family SRT_RS02115 PF00550 Phosphopantetheine attachment site SRT_RS02120 PF03060 Nitronate monooxygenase SRT_RS02125 PF00698 Acyl transferase domain SRT_RS02135 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS02135 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS02140 PF00364 Biotin-requiring enzyme SRT_RS02150 PF02785 Biotin carboxylase C-terminal domain SRT_RS02150 PF00289 Biotin carboxylase, N-terminal domain SRT_RS02150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRT_RS02155 PF01039 Carboxyl transferase domain SRT_RS02160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SRT_RS02165 PF04434 SWIM zinc finger SRT_RS02165 PF00176 SNF2 family N-terminal domain SRT_RS02165 PF00271 Helicase conserved C-terminal domain SRT_RS02175 PF08245 Mur ligase middle domain SRT_RS02175 PF01225 Mur ligase family, catalytic domain SRT_RS02175 PF02875 Mur ligase family, glutamate ligase domain SRT_RS02190 PF03449 Transcription elongation factor, N-terminal SRT_RS02190 PF01272 Transcription elongation factor, GreA/GreB, C-term SRT_RS02195 PF02096 60Kd inner membrane protein SRT_RS02200 PF00708 Acylphosphatase SRT_RS02205 PF00588 SpoU rRNA Methylase family SRT_RS02205 PF08032 RNA 2'-O ribose methyltransferase substrate binding SRT_RS02215 PF01027 Inhibitor of apoptosis-promoting Bax1 SRT_RS02225 PF03672 Uncharacterised protein family (UPF0154) SRT_RS02230 PF01177 Asp/Glu/Hydantoin racemase SRT_RS02235 PF01725 Ham1 family SRT_RS02255 PF02616 Segregation and condensation protein ScpA SRT_RS02260 PF04079 Segregation and condensation complex subunit ScpB SRT_RS02265 PF00849 RNA pseudouridylate synthase SRT_RS02265 PF01479 S4 domain SRT_RS02270 PF01809 Putative membrane protein insertion efficiency factor SRT_RS02275 PF02386 Cation transport protein SRT_RS02280 PF02080 TrkA-C domain SRT_RS02280 PF02254 TrkA-N domain SRT_RS02285 PF00588 SpoU rRNA Methylase family SRT_RS02305 PF12822 ECF transporter, substrate-specific component SRT_RS02310 PF01569 PAP2 superfamily SRT_RS02315 PF03788 LrgA family SRT_RS02325 PF04055 Radical SAM superfamily SRT_RS02325 PF16199 Radical_SAM C-terminal domain SRT_RS02330 PF06962 Putative rRNA methylase SRT_RS02340 PF00999 Sodium/hydrogen exchanger family SRT_RS02345 PF00005 ABC transporter SRT_RS02350 PF01594 AI-2E family transporter SRT_RS02355 PF01595 Cyclin M transmembrane N-terminal domain SRT_RS02355 PF00571 CBS domain SRT_RS02355 PF03471 Transporter associated domain SRT_RS02360 PF04055 Radical SAM superfamily SRT_RS02370 PF00501 AMP-binding enzyme SRT_RS02370 PF13193 AMP-binding enzyme C-terminal domain SRT_RS02380 PF00550 Phosphopantetheine attachment site SRT_RS02400 PF13280 WYL domain SRT_RS02400 PF08279 HTH domain SRT_RS02405 PF01965 DJ-1/PfpI family SRT_RS02425 PF01032 FecCD transport family SRT_RS02430 PF01032 FecCD transport family SRT_RS02440 PF00005 ABC transporter SRT_RS02450 PF02875 Mur ligase family, glutamate ligase domain SRT_RS02450 PF08245 Mur ligase middle domain SRT_RS02455 PF14667 Polysaccharide biosynthesis C-terminal domain SRT_RS02455 PF01943 Polysaccharide biosynthesis protein SRT_RS02460 PF01053 Cys/Met metabolism PLP-dependent enzyme SRT_RS02465 PF00155 Aminotransferase class I and II SRT_RS02475 PF00574 Clp protease SRT_RS02485 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SRT_RS02490 PF13458 Periplasmic binding protein SRT_RS02495 PF02653 Branched-chain amino acid transport system / permease component SRT_RS02500 PF02653 Branched-chain amino acid transport system / permease component SRT_RS02500 PF11862 Domain of unknown function (DUF3382) SRT_RS02505 PF00005 ABC transporter SRT_RS02505 PF12399 Branched-chain amino acid ATP-binding cassette transporter SRT_RS02510 PF00005 ABC transporter SRT_RS02515 PF00571 CBS domain SRT_RS02530 PF04468 PSP1 C-terminal conserved region SRT_RS02535 PF06156 Initiation control protein YabA SRT_RS02540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SRT_RS02545 PF00909 Ammonium Transporter Family SRT_RS02550 PF00543 Nitrogen regulatory protein P-II SRT_RS02555 PF00266 Aminotransferase class-V SRT_RS02565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SRT_RS02565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SRT_RS02565 PF01842 ACT domain SRT_RS02570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SRT_RS02570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SRT_RS02575 PF03960 ArsC family SRT_RS02580 PF00730 HhH-GPD superfamily base excision DNA repair protein SRT_RS02580 PF00633 Helix-hairpin-helix motif SRT_RS02580 PF10576 Iron-sulfur binding domain of endonuclease III SRT_RS02585 PF03372 Endonuclease/Exonuclease/phosphatase family SRT_RS02595 PF01022 Bacterial regulatory protein, arsR family SRT_RS02625 PF12804 MobA-like NTP transferase domain SRT_RS02625 PF14602 Hexapeptide repeat of succinyl-transferase SRT_RS02625 PF00132 Bacterial transferase hexapeptide (six repeats) SRT_RS02650 PF17854 FtsK alpha domain SRT_RS02650 PF09397 Ftsk gamma domain SRT_RS02650 PF01580 FtsK/SpoIIIE family SRT_RS02660 PF00298 Ribosomal protein L11, RNA binding domain SRT_RS02660 PF03946 Ribosomal protein L11, N-terminal domain SRT_RS02665 PF00687 Ribosomal protein L1p/L10e family SRT_RS02670 PF00696 Amino acid kinase family SRT_RS02675 PF01765 Ribosome recycling factor SRT_RS02685 PF01625 Peptide methionine sulfoxide reductase SRT_RS02690 PF06855 YozE SAM-like fold SRT_RS02695 PF02562 PhoH-like protein SRT_RS02705 PF01219 Prokaryotic diacylglycerol kinase SRT_RS02710 PF07650 KH domain SRT_RS02710 PF01926 50S ribosome-binding GTPase SRT_RS02730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SRT_RS02730 PF06827 Zinc finger found in FPG and IleRS SRT_RS02730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SRT_RS02735 PF01121 Dephospho-CoA kinase SRT_RS02755 PF08206 Ribonuclease B OB domain SRT_RS02755 PF00773 RNB domain SRT_RS02755 PF17876 Cold shock domain SRT_RS02755 PF00575 S1 RNA binding domain SRT_RS02760 PF01668 SmpB protein SRT_RS02775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRT_RS02785 PF00480 ROK family SRT_RS02795 PF01321 Creatinase/Prolidase N-terminal domain SRT_RS02795 PF00557 Metallopeptidase family M24 SRT_RS02800 PF00356 Bacterial regulatory proteins, lacI family SRT_RS02805 PF09154 Domain of unknown function (DUF1939) SRT_RS02805 PF00128 Alpha amylase, catalytic domain SRT_RS02810 PF13439 Glycosyltransferase Family 4 SRT_RS02810 PF00534 Glycosyl transferases group 1 SRT_RS02825 PF03129 Anticodon binding domain SRT_RS02825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRT_RS02825 PF02824 TGS domain SRT_RS02825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SRT_RS02840 PF13185 GAF domain SRT_RS02845 PF12169 DNA polymerase III subunits gamma and tau domain III SRT_RS02885 PF00438 S-adenosylmethionine synthetase, N-terminal domain SRT_RS02885 PF02772 S-adenosylmethionine synthetase, central domain SRT_RS02885 PF02773 S-adenosylmethionine synthetase, C-terminal domain SRT_RS02890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRT_RS02895 PF17912 MalK OB fold domain SRT_RS02895 PF00005 ABC transporter SRT_RS02895 PF03459 TOBE domain SRT_RS02900 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS02920 PF00356 Bacterial regulatory proteins, lacI family SRT_RS02925 PF02446 4-alpha-glucanotransferase SRT_RS02930 PF00343 Carbohydrate phosphorylase SRT_RS02935 PF00690 Cation transporter/ATPase, N-terminus SRT_RS02935 PF00689 Cation transporting ATPase, C-terminus SRT_RS02940 PF02254 TrkA-N domain SRT_RS02940 PF02080 TrkA-C domain SRT_RS02945 PF02080 TrkA-C domain SRT_RS02945 PF02254 TrkA-N domain SRT_RS02950 PF00892 EamA-like transporter family SRT_RS02960 PF02779 Transketolase, pyrimidine binding domain SRT_RS02960 PF02780 Transketolase, C-terminal domain SRT_RS02960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SRT_RS02970 PF03061 Thioesterase superfamily SRT_RS02970 PF00571 CBS domain SRT_RS02970 PF00392 Bacterial regulatory proteins, gntR family SRT_RS02970 PF07085 DRTGG domain SRT_RS02975 PF00557 Metallopeptidase family M24 SRT_RS02980 PF03631 Virulence factor BrkB SRT_RS02990 PF00005 ABC transporter SRT_RS03000 PF07730 Histidine kinase SRT_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS03005 PF00072 Response regulator receiver domain SRT_RS03005 PF00196 Bacterial regulatory proteins, luxR family SRT_RS03015 PF06177 QueT transporter SRT_RS03020 PF00533 BRCA1 C Terminus (BRCT) domain SRT_RS03020 PF01653 NAD-dependent DNA ligase adenylation domain SRT_RS03020 PF03120 NAD-dependent DNA ligase OB-fold domain SRT_RS03020 PF12826 Helix-hairpin-helix motif SRT_RS03020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SRT_RS03025 PF00781 Diacylglycerol kinase catalytic domain SRT_RS03030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRT_RS03030 PF17999 Pullulanase N1-terminal domain SRT_RS03030 PF00128 Alpha amylase, catalytic domain SRT_RS03035 PF00128 Alpha amylase, catalytic domain SRT_RS03035 PF02806 Alpha amylase, C-terminal all-beta domain SRT_RS03035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SRT_RS03040 PF00483 Nucleotidyl transferase SRT_RS03045 PF00483 Nucleotidyl transferase SRT_RS03050 PF08323 Starch synthase catalytic domain SRT_RS03050 PF00534 Glycosyl transferases group 1 SRT_RS03055 PF00343 Carbohydrate phosphorylase SRT_RS03060 PF00137 ATP synthase subunit C SRT_RS03065 PF00119 ATP synthase A chain SRT_RS03070 PF00430 ATP synthase B/B' CF(0) SRT_RS03075 PF00213 ATP synthase delta (OSCP) subunit SRT_RS03080 PF00306 ATP synthase alpha/beta chain, C terminal domain SRT_RS03080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SRT_RS03080 PF02874 ATP synthase alpha/beta family, beta-barrel domain SRT_RS03085 PF00231 ATP synthase SRT_RS03090 PF02874 ATP synthase alpha/beta family, beta-barrel domain SRT_RS03090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SRT_RS03095 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SRT_RS03095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SRT_RS03105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRT_RS03115 PF01223 DNA/RNA non-specific endonuclease SRT_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS03135 PF00005 ABC transporter SRT_RS03140 PF00486 Transcriptional regulatory protein, C terminal SRT_RS03140 PF00072 Response regulator receiver domain SRT_RS03145 PF00672 HAMP domain SRT_RS03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS03145 PF13426 PAS domain SRT_RS03145 PF00512 His Kinase A (phospho-acceptor) domain SRT_RS03155 PF14622 Ribonuclease-III-like SRT_RS03155 PF00035 Double-stranded RNA binding motif SRT_RS03160 PF02463 RecF/RecN/SMC N terminal domain SRT_RS03160 PF06470 SMC proteins Flexible Hinge Domain SRT_RS03165 PF01409 tRNA synthetases class II core domain (F) SRT_RS03165 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SRT_RS03170 PF00583 Acetyltransferase (GNAT) family SRT_RS03205 PF18395 Cas3 C-terminal domain SRT_RS03205 PF00270 DEAD/DEAH box helicase SRT_RS03205 PF18019 HD domain SRT_RS03220 PF09344 CT1975-like protein SRT_RS03235 PF01867 CRISPR associated protein Cas1 SRT_RS03245 PF12705 PD-(D/E)XK nuclease superfamily SRT_RS03250 PF12705 PD-(D/E)XK nuclease superfamily SRT_RS03250 PF00580 UvrD/REP helicase N-terminal domain SRT_RS03250 PF13361 UvrD-like helicase C-terminal domain SRT_RS03255 PF08220 DeoR-like helix-turn-helix domain SRT_RS03255 PF00455 DeoR C terminal sensor domain SRT_RS03260 PF02502 Ribose/Galactose Isomerase SRT_RS03265 PF02502 Ribose/Galactose Isomerase SRT_RS03270 PF00294 pfkB family carbohydrate kinase SRT_RS03275 PF01791 DeoC/LacD family aldolase SRT_RS03280 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SRT_RS03285 PF02378 Phosphotransferase system, EIIC SRT_RS03285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS03290 PF00232 Glycosyl hydrolase family 1 SRT_RS03345 PF01926 50S ribosome-binding GTPase SRT_RS03345 PF13167 GTP-binding GTPase N-terminal SRT_RS03345 PF16360 GTP-binding GTPase Middle Region SRT_RS03355 PF12706 Beta-lactamase superfamily domain SRT_RS03355 PF00753 Metallo-beta-lactamase superfamily SRT_RS03360 PF00106 short chain dehydrogenase SRT_RS03365 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SRT_RS03365 PF17768 RecJ OB domain SRT_RS03365 PF02272 DHHA1 domain SRT_RS03365 PF01368 DHH family SRT_RS03370 PF08279 HTH domain SRT_RS03370 PF13280 WYL domain SRT_RS03385 PF00156 Phosphoribosyl transferase domain SRT_RS03390 PF04204 Homoserine O-succinyltransferase SRT_RS03400 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SRT_RS03405 PF01784 NIF3 (NGG1p interacting factor 3) SRT_RS03410 PF00483 Nucleotidyl transferase SRT_RS03415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SRT_RS03425 PF16363 GDP-mannose 4,6 dehydratase SRT_RS03435 PF01594 AI-2E family transporter SRT_RS03445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRT_RS03445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRT_RS03445 PF00205 Thiamine pyrophosphate enzyme, central domain SRT_RS03450 PF03306 Alpha-acetolactate decarboxylase SRT_RS03455 PF00324 Amino acid permease SRT_RS03475 PF12558 ATP-binding cassette cobalt transporter SRT_RS03475 PF00005 ABC transporter SRT_RS03480 PF17770 Ribonuclease J C-terminal domain SRT_RS03480 PF00753 Metallo-beta-lactamase superfamily SRT_RS03480 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SRT_RS03505 PF02350 UDP-N-acetylglucosamine 2-epimerase SRT_RS03525 PF01270 Glycosyl hydrolases family 8 SRT_RS03530 PF16326 ABC transporter C-terminal domain SRT_RS03530 PF12848 ABC transporter SRT_RS03530 PF00005 ABC transporter SRT_RS03540 PF07685 CobB/CobQ-like glutamine amidotransferase domain SRT_RS03545 PF08245 Mur ligase middle domain SRT_RS03545 PF08353 Domain of unknown function (DUF1727) SRT_RS03550 PF02457 DisA bacterial checkpoint controller nucleotide-binding SRT_RS03560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SRT_RS03560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SRT_RS03560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SRT_RS03560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SRT_RS03565 PF02525 Flavodoxin-like fold SRT_RS03575 PF06969 HemN C-terminal domain SRT_RS03575 PF04055 Radical SAM superfamily SRT_RS03585 PF00293 NUDIX domain SRT_RS03590 PF13344 Haloacid dehalogenase-like hydrolase SRT_RS03600 PF12704 MacB-like periplasmic core domain SRT_RS03600 PF00005 ABC transporter SRT_RS03600 PF02687 FtsX-like permease family SRT_RS03610 PF00890 FAD binding domain SRT_RS03610 PF04205 FMN-binding domain SRT_RS03630 PF01867 CRISPR associated protein Cas1 SRT_RS03635 PF09827 CRISPR associated protein Cas2 SRT_RS03655 PF00717 Peptidase S24-like SRT_RS03655 PF01726 LexA DNA binding domain SRT_RS03700 PF01293 Phosphoenolpyruvate carboxykinase SRT_RS03710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRT_RS03710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRT_RS03720 PF00485 Phosphoribulokinase / Uridine kinase family SRT_RS03725 PF00682 HMGL-like SRT_RS03725 PF08502 LeuA allosteric (dimerisation) domain SRT_RS03730 PF00180 Isocitrate/isopropylmalate dehydrogenase SRT_RS03735 PF00330 Aconitase family (aconitate hydratase) SRT_RS03740 PF00694 Aconitase C-terminal domain SRT_RS03755 PF13673 Acetyltransferase (GNAT) domain SRT_RS03755 PF04229 GrpB protein SRT_RS03765 PF05175 Methyltransferase small domain SRT_RS03770 PF03575 Peptidase family S51 SRT_RS03775 PF08331 Domain of unknown function (DUF1730) SRT_RS03785 PF00005 ABC transporter SRT_RS03795 PF00753 Metallo-beta-lactamase superfamily SRT_RS03805 PF02142 MGS-like domain SRT_RS03805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRT_RS03805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRT_RS03820 PF00929 Exonuclease SRT_RS03820 PF04851 Type III restriction enzyme, res subunit SRT_RS03820 PF13307 Helicase C-terminal domain SRT_RS03825 PF00155 Aminotransferase class I and II SRT_RS03830 PF00152 tRNA synthetases class II (D, K and N) SRT_RS03830 PF01336 OB-fold nucleic acid binding domain SRT_RS03840 PF00465 Iron-containing alcohol dehydrogenase SRT_RS03845 PF01042 Endoribonuclease L-PSP SRT_RS03855 PF03668 P-loop ATPase protein family SRT_RS03860 PF01933 Uncharacterised protein family UPF0052 SRT_RS03870 PF03577 Peptidase family C69 SRT_RS03875 PF01297 Zinc-uptake complex component A periplasmic SRT_RS03875 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SRT_RS03880 PF13649 Methyltransferase domain SRT_RS03900 PF02272 DHHA1 domain SRT_RS03900 PF01368 DHH family SRT_RS03905 PF02798 Glutathione S-transferase, N-terminal domain SRT_RS03910 PF00962 Adenosine/AMP deaminase SRT_RS03915 PF00258 Flavodoxin SRT_RS03920 PF01458 Uncharacterized protein family (UPF0051) SRT_RS03930 PF00800 Prephenate dehydratase SRT_RS03930 PF01817 Chorismate mutase type II SRT_RS03935 PF00654 Voltage gated chloride channel SRT_RS03940 PF00654 Voltage gated chloride channel SRT_RS03945 PF01245 Ribosomal protein L19 SRT_RS03955 PF07690 Major Facilitator Superfamily SRT_RS03980 PF01098 Cell cycle protein SRT_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS03990 PF01751 Toprim domain SRT_RS03990 PF00204 DNA gyrase B SRT_RS03990 PF00986 DNA gyrase B subunit, carboxyl terminus SRT_RS03995 PF06160 Septation ring formation regulator, EzrA SRT_RS04010 PF00155 Aminotransferase class I and II SRT_RS04015 PF13393 Histidyl-tRNA synthetase SRT_RS04020 PF01634 ATP phosphoribosyltransferase SRT_RS04025 PF00815 Histidinol dehydrogenase SRT_RS04035 PF00475 Imidazoleglycerol-phosphate dehydratase SRT_RS04045 PF00117 Glutamine amidotransferase class-I SRT_RS04050 PF00977 Histidine biosynthesis protein SRT_RS04055 PF00977 Histidine biosynthesis protein SRT_RS04060 PF01502 Phosphoribosyl-AMP cyclohydrolase SRT_RS04065 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SRT_RS04070 PF12950 TaqI-like C-terminal specificity domain SRT_RS04070 PF02384 N-6 DNA Methylase SRT_RS04080 PF00239 Resolvase, N terminal domain SRT_RS04080 PF02796 Helix-turn-helix domain of resolvase SRT_RS04105 PF13419 Haloacid dehalogenase-like hydrolase SRT_RS04115 PF02595 Glycerate kinase family SRT_RS04145 PF13419 Haloacid dehalogenase-like hydrolase SRT_RS04155 PF02151 UvrB/uvrC motif SRT_RS04155 PF01541 GIY-YIG catalytic domain SRT_RS04155 PF08459 UvrC Helix-hairpin-helix N-terminal SRT_RS04165 PF01546 Peptidase family M20/M25/M40 SRT_RS04170 PF03167 Uracil DNA glycosylase superfamily SRT_RS04190 PF10396 GTP-binding protein TrmE N-terminus SRT_RS04190 PF12631 MnmE helical domain SRT_RS04190 PF01926 50S ribosome-binding GTPase SRT_RS04195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SRT_RS04200 PF01676 Metalloenzyme superfamily SRT_RS04215 PF01048 Phosphorylase superfamily SRT_RS04220 PF00117 Glutamine amidotransferase class-I SRT_RS04225 PF01048 Phosphorylase superfamily SRT_RS04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS04235 PF03466 LysR substrate binding domain SRT_RS04240 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SRT_RS04240 PF00970 Oxidoreductase FAD-binding domain SRT_RS04240 PF00175 Oxidoreductase NAD-binding domain SRT_RS04245 PF01180 Dihydroorotate dehydrogenase SRT_RS04250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SRT_RS04255 PF00156 Phosphoribosyl transferase domain SRT_RS04265 PF01161 Phosphatidylethanolamine-binding protein SRT_RS04270 PF04237 YjbR SRT_RS04285 PF03167 Uracil DNA glycosylase superfamily SRT_RS04290 PF01979 Amidohydrolase family SRT_RS04295 PF02872 5'-nucleotidase, C-terminal domain SRT_RS04295 PF00149 Calcineurin-like phosphoesterase SRT_RS04300 PF02660 Glycerol-3-phosphate acyltransferase SRT_RS04305 PF01751 Toprim domain SRT_RS04305 PF00986 DNA gyrase B subunit, carboxyl terminus SRT_RS04305 PF00204 DNA gyrase B SRT_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS04310 PF02661 Fic/DOC family SRT_RS04315 PF00521 DNA gyrase/topoisomerase IV, subunit A SRT_RS04315 PF03989 DNA gyrase C-terminal domain, beta-propeller SRT_RS04320 PF01063 Amino-transferase class IV SRT_RS04340 PF00575 S1 RNA binding domain SRT_RS04370 PF00005 ABC transporter SRT_RS04375 PF00392 Bacterial regulatory proteins, gntR family SRT_RS04380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SRT_RS04380 PF02811 PHP domain SRT_RS04380 PF14579 Helix-hairpin-helix motif SRT_RS04380 PF07733 Bacterial DNA polymerase III alpha NTPase domain SRT_RS04380 PF01336 OB-fold nucleic acid binding domain SRT_RS04385 PF00365 Phosphofructokinase SRT_RS04390 PF00224 Pyruvate kinase, barrel domain SRT_RS04390 PF02887 Pyruvate kinase, alpha/beta domain SRT_RS04395 PF04226 Transglycosylase associated protein SRT_RS04405 PF01380 SIS domain SRT_RS04410 PF02378 Phosphotransferase system, EIIC SRT_RS04410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS04415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS04415 PF08279 HTH domain SRT_RS04415 PF05043 Mga helix-turn-helix domain SRT_RS04420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS04425 PF08125 Mannitol dehydrogenase C-terminal domain SRT_RS04425 PF01232 Mannitol dehydrogenase Rossmann domain SRT_RS04430 PF03831 PhnA domain SRT_RS04430 PF08274 PhnA Zinc-Ribbon SRT_RS04435 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS04440 PF00005 ABC transporter SRT_RS04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRT_RS04450 PF16916 Dimerisation domain of Zinc Transporter SRT_RS04450 PF01545 Cation efflux family SRT_RS04455 PF01235 Sodium:alanine symporter family SRT_RS04460 PF13361 UvrD-like helicase C-terminal domain SRT_RS04460 PF00580 UvrD/REP helicase N-terminal domain SRT_RS04465 PF01053 Cys/Met metabolism PLP-dependent enzyme SRT_RS04480 PF00578 AhpC/TSA family SRT_RS04490 PF00005 ABC transporter SRT_RS04495 PF12704 MacB-like periplasmic core domain SRT_RS04495 PF02687 FtsX-like permease family SRT_RS04505 PF00005 ABC transporter SRT_RS04505 PF08021 Siderophore-interacting FAD-binding domain SRT_RS04505 PF04954 Siderophore-interacting protein SRT_RS04505 PF00664 ABC transporter transmembrane region SRT_RS04510 PF00664 ABC transporter transmembrane region SRT_RS04510 PF00005 ABC transporter SRT_RS04570 PF00005 ABC transporter SRT_RS04580 PF00072 Response regulator receiver domain SRT_RS04580 PF00486 Transcriptional regulatory protein, C terminal SRT_RS04600 PF01687 Riboflavin kinase SRT_RS04600 PF06574 FAD synthetase SRT_RS04605 PF03960 ArsC family SRT_RS04615 PF00459 Inositol monophosphatase family SRT_RS04620 PF01189 16S rRNA methyltransferase RsmB/F SRT_RS04620 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SRT_RS04620 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SRT_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS04640 PF00005 ABC transporter SRT_RS04645 PF00005 ABC transporter SRT_RS04650 PF01895 PhoU domain SRT_RS04655 PF01433 Peptidase family M1 domain SRT_RS04655 PF11838 ERAP1-like C-terminal domain SRT_RS04665 PF00072 Response regulator receiver domain SRT_RS04665 PF00486 Transcriptional regulatory protein, C terminal SRT_RS04680 PF00485 Phosphoribulokinase / Uridine kinase family SRT_RS04685 PF05175 Methyltransferase small domain SRT_RS04690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SRT_RS04690 PF02885 Glycosyl transferase family, helical bundle domain SRT_RS04690 PF00591 Glycosyl transferase family, a/b domain SRT_RS04695 PF01791 DeoC/LacD family aldolase SRT_RS04700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SRT_RS04710 PF00005 ABC transporter SRT_RS04715 PF02653 Branched-chain amino acid transport system / permease component SRT_RS04720 PF02653 Branched-chain amino acid transport system / permease component SRT_RS04725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRT_RS04725 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS04735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SRT_RS04735 PF00056 lactate/malate dehydrogenase, NAD binding domain SRT_RS04740 PF00521 DNA gyrase/topoisomerase IV, subunit A SRT_RS04740 PF03989 DNA gyrase C-terminal domain, beta-propeller SRT_RS04745 PF04203 Sortase domain SRT_RS04750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SRT_RS04800 PF00571 CBS domain SRT_RS04800 PF00005 ABC transporter SRT_RS04805 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS04810 PF00005 ABC transporter SRT_RS04815 PF12704 MacB-like periplasmic core domain SRT_RS04815 PF02687 FtsX-like permease family SRT_RS04825 PF03358 NADPH-dependent FMN reductase SRT_RS04825 PF04205 FMN-binding domain SRT_RS04825 PF00890 FAD binding domain SRT_RS04830 PF03358 NADPH-dependent FMN reductase SRT_RS04830 PF00890 FAD binding domain SRT_RS04830 PF04205 FMN-binding domain SRT_RS04835 PF02424 ApbE family SRT_RS04840 PF01361 Tautomerase enzyme SRT_RS04845 PF00265 Thymidine kinase SRT_RS04850 PF03462 PCRF domain SRT_RS04850 PF00472 RF-1 domain SRT_RS04855 PF05175 Methyltransferase small domain SRT_RS04860 PF03481 Putative GTP-binding controlling metal-binding SRT_RS04860 PF01300 Telomere recombination SRT_RS04880 PF00664 ABC transporter transmembrane region SRT_RS04880 PF00005 ABC transporter SRT_RS04885 PF00005 ABC transporter SRT_RS04885 PF00664 ABC transporter transmembrane region SRT_RS04890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SRT_RS04890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SRT_RS04890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SRT_RS04890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SRT_RS04895 PF12822 ECF transporter, substrate-specific component SRT_RS04900 PF02441 Flavoprotein SRT_RS04910 PF01268 Formate--tetrahydrofolate ligase SRT_RS04930 PF00117 Glutamine amidotransferase class-I SRT_RS04930 PF02540 NAD synthase SRT_RS04930 PF00958 GMP synthase C terminal domain SRT_RS04935 PF00392 Bacterial regulatory proteins, gntR family SRT_RS04935 PF07702 UTRA domain SRT_RS04945 PF00571 CBS domain SRT_RS04945 PF00005 ABC transporter SRT_RS04950 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS04955 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SRT_RS04960 PF02881 SRP54-type protein, helical bundle domain SRT_RS04960 PF02978 Signal peptide binding domain SRT_RS04960 PF00448 SRP54-type protein, GTPase domain SRT_RS04990 PF07722 Peptidase C26 SRT_RS04995 PF02629 CoA binding domain SRT_RS04995 PF06971 Putative DNA-binding protein N-terminus SRT_RS05015 PF00266 Aminotransferase class-V SRT_RS05020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SRT_RS05020 PF14572 Phosphoribosyl synthetase-associated domain SRT_RS05025 PF01928 CYTH domain SRT_RS05035 PF04607 Region found in RelA / SpoT proteins SRT_RS05040 PF01513 ATP-NAD kinase SRT_RS05045 PF00849 RNA pseudouridylate synthase SRT_RS05050 PF01515 Phosphate acetyl/butaryl transferase SRT_RS05060 PF00005 ABC transporter SRT_RS05065 PF00106 short chain dehydrogenase SRT_RS05070 PF01501 Glycosyl transferase family 8 SRT_RS05070 PF08437 Glycosyl transferase family 8 C-terminal SRT_RS05095 PF03610 PTS system fructose IIA component SRT_RS05105 PF00486 Transcriptional regulatory protein, C terminal SRT_RS05105 PF00072 Response regulator receiver domain SRT_RS05120 PF00005 ABC transporter SRT_RS05125 PF00589 Phage integrase family SRT_RS05125 PF13495 Phage integrase, N-terminal SAM-like domain SRT_RS05140 PF00364 Biotin-requiring enzyme SRT_RS05140 PF02436 Conserved carboxylase domain SRT_RS05140 PF00682 HMGL-like SRT_RS05145 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SRT_RS05150 PF04223 Citrate lyase, alpha subunit (CitF) SRT_RS05155 PF03328 HpcH/HpaI aldolase/citrate lyase family SRT_RS05160 PF06857 Malonate decarboxylase delta subunit (MdcD) SRT_RS05170 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SRT_RS05175 PF00364 Biotin-requiring enzyme SRT_RS05185 PF03600 Citrate transporter SRT_RS05195 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SRT_RS05200 PF08218 Citrate lyase ligase C-terminal domain SRT_RS05210 PF00072 Response regulator receiver domain SRT_RS05210 PF00486 Transcriptional regulatory protein, C terminal SRT_RS05220 PF00005 ABC transporter SRT_RS05225 PF02324 Glycosyl hydrolase family 70 SRT_RS05225 PF01473 Putative cell wall binding repeat SRT_RS05230 PF01473 Putative cell wall binding repeat SRT_RS05230 PF02324 Glycosyl hydrolase family 70 SRT_RS05235 PF01134 Glucose inhibited division protein A SRT_RS05240 PF01131 DNA topoisomerase SRT_RS05240 PF01396 Topoisomerase DNA binding C4 zinc finger SRT_RS05240 PF01751 Toprim domain SRT_RS05250 PF00480 ROK family SRT_RS05255 PF12464 Maltose acetyltransferase SRT_RS05255 PF14602 Hexapeptide repeat of succinyl-transferase SRT_RS05270 PF00005 ABC transporter SRT_RS05275 PF01032 FecCD transport family SRT_RS05280 PF01032 FecCD transport family SRT_RS05285 PF01351 Ribonuclease HII SRT_RS05290 PF01926 50S ribosome-binding GTPase SRT_RS05340 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS05340 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS05340 PF08659 KR domain SRT_RS05340 PF14765 Polyketide synthase dehydratase SRT_RS05340 PF00550 Phosphopantetheine attachment site SRT_RS05340 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS05345 PF00378 Enoyl-CoA hydratase/isomerase SRT_RS05350 PF14765 Polyketide synthase dehydratase SRT_RS05350 PF08659 KR domain SRT_RS05350 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS05350 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS05350 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS05350 PF00550 Phosphopantetheine attachment site SRT_RS05365 PF08659 KR domain SRT_RS05365 PF00501 AMP-binding enzyme SRT_RS05365 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS05365 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS05365 PF00668 Condensation domain SRT_RS05365 PF13193 AMP-binding enzyme C-terminal domain SRT_RS05365 PF14765 Polyketide synthase dehydratase SRT_RS05365 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS05365 PF00550 Phosphopantetheine attachment site SRT_RS05370 PF14765 Polyketide synthase dehydratase SRT_RS05370 PF00668 Condensation domain SRT_RS05370 PF13193 AMP-binding enzyme C-terminal domain SRT_RS05370 PF00501 AMP-binding enzyme SRT_RS05370 PF00550 Phosphopantetheine attachment site SRT_RS05370 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS05370 PF08659 KR domain SRT_RS05370 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS05370 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS05380 PF08659 KR domain SRT_RS05380 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS05380 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS05380 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS05380 PF00550 Phosphopantetheine attachment site SRT_RS05380 PF14765 Polyketide synthase dehydratase SRT_RS05390 PF00378 Enoyl-CoA hydratase/isomerase SRT_RS05405 PF00550 Phosphopantetheine attachment site SRT_RS05425 PF01648 4'-phosphopantetheinyl transferase superfamily SRT_RS05440 PF00701 Dihydrodipicolinate synthetase family SRT_RS05445 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRT_RS05445 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRT_RS05460 PF17961 Bacterial Ig domain SRT_RS05460 PF00746 LPXTG cell wall anchor motif SRT_RS05460 PF05737 Collagen binding domain SRT_RS05480 PF12833 Helix-turn-helix domain SRT_RS05480 PF00072 Response regulator receiver domain SRT_RS05490 PF00874 PRD domain SRT_RS05490 PF03123 CAT RNA binding domain SRT_RS05500 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS05505 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS05510 PF08402 TOBE domain SRT_RS05510 PF00005 ABC transporter SRT_RS05515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SRT_RS05515 PF01565 FAD binding domain SRT_RS05520 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SRT_RS05525 PF02152 Dihydroneopterin aldolase SRT_RS05530 PF00809 Pterin binding enzyme SRT_RS05535 PF01227 GTP cyclohydrolase I SRT_RS05540 PF02875 Mur ligase family, glutamate ligase domain SRT_RS05540 PF08245 Mur ligase middle domain SRT_RS05545 PF00288 GHMP kinases N terminal domain SRT_RS05545 PF08544 GHMP kinases C terminal SRT_RS05550 PF00742 Homoserine dehydrogenase SRT_RS05550 PF03447 Homoserine dehydrogenase, NAD binding domain SRT_RS05555 PF01522 Polysaccharide deacetylase SRT_RS05560 PF02770 Acyl-CoA dehydrogenase, middle domain SRT_RS05560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SRT_RS05560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SRT_RS05575 PF00542 Ribosomal protein L7/L12 C-terminal domain SRT_RS05575 PF16320 Ribosomal protein L7/L12 dimerisation domain SRT_RS05580 PF00466 Ribosomal protein L10 SRT_RS05590 PF17871 AAA lid domain SRT_RS05590 PF00004 ATPase family associated with various cellular activities (AAA) SRT_RS05590 PF07724 AAA domain (Cdc48 subfamily) SRT_RS05590 PF10431 C-terminal, D2-small domain, of ClpB protein SRT_RS05605 PF00155 Aminotransferase class I and II SRT_RS05605 PF00392 Bacterial regulatory proteins, gntR family SRT_RS05610 PF02574 Homocysteine S-methyltransferase SRT_RS05615 PF00324 Amino acid permease SRT_RS05620 PF01926 50S ribosome-binding GTPase SRT_RS05635 PF00186 Dihydrofolate reductase SRT_RS05640 PF04973 Nicotinamide mononucleotide transporter SRT_RS05645 PF00303 Thymidylate synthase SRT_RS05650 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SRT_RS05650 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SRT_RS05665 PF03006 Haemolysin-III related SRT_RS05670 PF01070 FMN-dependent dehydrogenase SRT_RS05675 PF00288 GHMP kinases N terminal domain SRT_RS05675 PF08544 GHMP kinases C terminal SRT_RS05690 PF13409 Glutathione S-transferase, N-terminal domain SRT_RS05695 PF00583 Acetyltransferase (GNAT) family SRT_RS05700 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRT_RS05705 PF00005 ABC transporter SRT_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS05730 PF03466 LysR substrate binding domain SRT_RS05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS05735 PF06993 Protein of unknown function (DUF1304) SRT_RS05745 PF00486 Transcriptional regulatory protein, C terminal SRT_RS05745 PF00072 Response regulator receiver domain SRT_RS05750 PF04607 Region found in RelA / SpoT proteins SRT_RS05760 PF08534 Redoxin SRT_RS05765 PF00664 ABC transporter transmembrane region SRT_RS05765 PF00005 ABC transporter SRT_RS05780 PF06508 Queuosine biosynthesis protein QueC SRT_RS05790 PF04055 Radical SAM superfamily SRT_RS05795 PF14489 QueF-like protein SRT_RS05805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SRT_RS05805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SRT_RS05815 PF02324 Glycosyl hydrolase family 70 SRT_RS05815 PF01473 Putative cell wall binding repeat SRT_RS05830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SRT_RS05840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SRT_RS05840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SRT_RS05865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS05865 PF03466 LysR substrate binding domain SRT_RS05875 PF00248 Aldo/keto reductase family SRT_RS05880 PF03466 LysR substrate binding domain SRT_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS05890 PF06736 Protein of unknown function (DUF1211) SRT_RS05925 PF02525 Flavodoxin-like fold SRT_RS05935 PF12002 MgsA AAA+ ATPase C terminal SRT_RS05935 PF16193 AAA C-terminal domain SRT_RS05935 PF00004 ATPase family associated with various cellular activities (AAA) SRT_RS05960 PF00248 Aldo/keto reductase family SRT_RS05970 PF03466 LysR substrate binding domain SRT_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS05995 PF08240 Alcohol dehydrogenase GroES-like domain SRT_RS05995 PF00107 Zinc-binding dehydrogenase SRT_RS06010 PF00248 Aldo/keto reductase family SRT_RS06020 PF02796 Helix-turn-helix domain of resolvase SRT_RS06020 PF00239 Resolvase, N terminal domain SRT_RS06045 PF00106 short chain dehydrogenase SRT_RS06050 PF01965 DJ-1/PfpI family SRT_RS06060 PF00664 ABC transporter transmembrane region SRT_RS06060 PF00005 ABC transporter SRT_RS06065 PF00005 ABC transporter SRT_RS06065 PF00664 ABC transporter transmembrane region SRT_RS06070 PF00583 Acetyltransferase (GNAT) family SRT_RS06080 PF01743 Poly A polymerase head domain SRT_RS06080 PF12627 Probable RNA and SrmB- binding site of polymerase A SRT_RS06080 PF13735 tRNA nucleotidyltransferase domain 2 putative SRT_RS06085 PF05173 Dihydrodipicolinate reductase, C-terminus SRT_RS06085 PF01113 Dihydrodipicolinate reductase, N-terminus SRT_RS06090 PF02645 Uncharacterised protein, DegV family COG1307 SRT_RS06100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SRT_RS06100 PF18766 SWI2/SNF2 ATPase SRT_RS06100 PF12008 Type I restriction and modification enzyme - subunit R C terminal SRT_RS06125 PF02384 N-6 DNA Methylase SRT_RS06125 PF12161 HsdM N-terminal domain SRT_RS06140 PF16363 GDP-mannose 4,6 dehydratase SRT_RS06145 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SRT_RS06145 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SRT_RS06150 PF08544 GHMP kinases C terminal SRT_RS06150 PF10509 Galactokinase galactose-binding signature SRT_RS06150 PF00288 GHMP kinases N terminal domain SRT_RS06155 PF00356 Bacterial regulatory proteins, lacI family SRT_RS06160 PF00128 Alpha amylase, catalytic domain SRT_RS06170 PF00128 Alpha amylase, catalytic domain SRT_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS06185 PF01547 Bacterial extracellular solute-binding protein SRT_RS06190 PF16875 Glycosyl hydrolase family 36 N-terminal domain SRT_RS06190 PF16874 Glycosyl hydrolase family 36 C-terminal domain SRT_RS06195 PF02311 AraC-like ligand binding domain SRT_RS06195 PF12833 Helix-turn-helix domain SRT_RS06200 PF02574 Homocysteine S-methyltransferase SRT_RS06200 PF02219 Methylenetetrahydrofolate reductase SRT_RS06210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS06210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS06215 PF00294 pfkB family carbohydrate kinase SRT_RS06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS06230 PF01746 tRNA (Guanine-1)-methyltransferase SRT_RS06245 PF00886 Ribosomal protein S16 SRT_RS06250 PF02687 FtsX-like permease family SRT_RS06250 PF12704 MacB-like periplasmic core domain SRT_RS06255 PF00005 ABC transporter SRT_RS06265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SRT_RS06265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SRT_RS06265 PF02142 MGS-like domain SRT_RS06270 PF00117 Glutamine amidotransferase class-I SRT_RS06270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SRT_RS06275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SRT_RS06275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SRT_RS06280 PF00860 Permease family SRT_RS06285 PF00156 Phosphoribosyl transferase domain SRT_RS06295 PF01479 S4 domain SRT_RS06295 PF00849 RNA pseudouridylate synthase SRT_RS06300 PF01252 Signal peptidase (SPase) II SRT_RS06305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SRT_RS06305 PF03466 LysR substrate binding domain SRT_RS06310 PF00293 NUDIX domain SRT_RS06310 PF09297 NADH pyrophosphatase zinc ribbon domain SRT_RS06320 PF01016 Ribosomal L27 protein SRT_RS06330 PF00829 Ribosomal prokaryotic L21 protein SRT_RS06335 PF02568 Thiamine biosynthesis protein (ThiI) SRT_RS06335 PF02926 THUMP domain SRT_RS06340 PF00266 Aminotransferase class-V SRT_RS06350 PF02875 Mur ligase family, glutamate ligase domain SRT_RS06350 PF08245 Mur ligase middle domain SRT_RS06355 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS06355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SRT_RS06360 PF00248 Aldo/keto reductase family SRT_RS06365 PF05257 CHAP domain SRT_RS06365 PF01476 LysM domain SRT_RS06380 PF00535 Glycosyl transferase family 2 SRT_RS06390 PF00884 Sulfatase SRT_RS06400 PF00535 Glycosyl transferase family 2 SRT_RS06405 PF00005 ABC transporter SRT_RS06415 PF00535 Glycosyl transferase family 2 SRT_RS06430 PF04321 RmlD substrate binding domain SRT_RS06440 PF01883 Iron-sulfur cluster assembly protein SRT_RS06445 PF04539 Sigma-70 region 3 SRT_RS06445 PF04542 Sigma-70 region 2 SRT_RS06445 PF04545 Sigma-70, region 4 SRT_RS06445 PF00140 Sigma-70 factor, region 1.2 SRT_RS06445 PF03979 Sigma-70 factor, region 1.1 SRT_RS06450 PF10410 DnaB-helicase binding domain of primase SRT_RS06450 PF01807 CHC2 zinc finger SRT_RS06450 PF08275 DNA primase catalytic core, N-terminal domain SRT_RS06460 PF01741 Large-conductance mechanosensitive channel, MscL SRT_RS06465 PF01165 Ribosomal protein S21 SRT_RS06470 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRT_RS06475 PF00155 Aminotransferase class I and II SRT_RS06490 PF01381 Helix-turn-helix SRT_RS06500 PF04851 Type III restriction enzyme, res subunit SRT_RS06500 PF02151 UvrB/uvrC motif SRT_RS06500 PF00271 Helicase conserved C-terminal domain SRT_RS06500 PF12344 Ultra-violet resistance protein B SRT_RS06500 PF17757 UvrB interaction domain SRT_RS06510 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRT_RS06515 PF00005 ABC transporter SRT_RS06525 PF16326 ABC transporter C-terminal domain SRT_RS06525 PF00005 ABC transporter SRT_RS06525 PF12848 ABC transporter SRT_RS06535 PF01926 50S ribosome-binding GTPase SRT_RS06535 PF01018 GTP1/OBG SRT_RS06535 PF09269 Domain of unknown function (DUF1967) SRT_RS06580 PF01938 TRAM domain SRT_RS06580 PF05958 tRNA (Uracil-5-)-methyltransferase SRT_RS06585 PF03816 Cell envelope-related transcriptional attenuator domain SRT_RS06590 PF00800 Prephenate dehydratase SRT_RS06595 PF01202 Shikimate kinase SRT_RS06600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SRT_RS06605 PF06133 Control of competence regulator ComK, YlbF/YmcA SRT_RS06610 PF02153 Prephenate dehydrogenase SRT_RS06615 PF01264 Chorismate synthase SRT_RS06620 PF01761 3-dehydroquinate synthase SRT_RS06625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SRT_RS06625 PF08501 Shikimate dehydrogenase substrate binding domain SRT_RS06630 PF01487 Type I 3-dehydroquinase SRT_RS06635 PF10672 S-adenosylmethionine-dependent methyltransferase SRT_RS06635 PF17785 PUA-like domain SRT_RS06640 PF00884 Sulfatase SRT_RS06660 PF00152 tRNA synthetases class II (D, K and N) SRT_RS06660 PF01336 OB-fold nucleic acid binding domain SRT_RS06665 PF02324 Glycosyl hydrolase family 70 SRT_RS06665 PF01473 Putative cell wall binding repeat SRT_RS06680 PF02229 Transcriptional Coactivator p15 (PC4) SRT_RS06690 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS06690 PF13192 Thioredoxin domain SRT_RS06695 PF00578 AhpC/TSA family SRT_RS06700 PF01136 Peptidase family U32 SRT_RS06700 PF16325 Peptidase family U32 C-terminal domain SRT_RS06720 PF12732 YtxH-like protein SRT_RS06730 PF01790 Prolipoprotein diacylglyceryl transferase SRT_RS06735 PF02603 HPr Serine kinase N terminus SRT_RS06735 PF07475 HPr Serine kinase C-terminal domain SRT_RS06745 PF10263 SprT-like family SRT_RS06750 PF17674 HHH domain SRT_RS06750 PF00575 S1 RNA binding domain SRT_RS06750 PF16921 Tex protein YqgF-like domain SRT_RS06750 PF09371 Tex-like protein N-terminal domain SRT_RS06765 PF03773 Predicted permease SRT_RS06770 PF09323 Domain of unknown function (DUF1980) SRT_RS06775 PF07690 Major Facilitator Superfamily SRT_RS06780 PF02881 SRP54-type protein, helical bundle domain SRT_RS06780 PF00448 SRP54-type protein, GTPase domain SRT_RS06810 PF01381 Helix-turn-helix SRT_RS06815 PF00107 Zinc-binding dehydrogenase SRT_RS06815 PF08240 Alcohol dehydrogenase GroES-like domain SRT_RS06820 PF09278 MerR, DNA binding SRT_RS06820 PF00376 MerR family regulatory protein SRT_RS06835 PF00689 Cation transporting ATPase, C-terminus SRT_RS06835 PF00690 Cation transporter/ATPase, N-terminus SRT_RS06855 PF01966 HD domain SRT_RS06875 PF00121 Triosephosphate isomerase SRT_RS06880 PF03144 Elongation factor Tu domain 2 SRT_RS06880 PF03143 Elongation factor Tu C-terminal domain SRT_RS06880 PF00009 Elongation factor Tu GTP binding domain SRT_RS06890 PF00311 Phosphoenolpyruvate carboxylase SRT_RS06910 PF09515 Thiamine transporter protein (Thia_YuaJ) SRT_RS06915 PF13457 GW (Gly-Tryp) dipeptide domain SRT_RS06915 PF01510 N-acetylmuramoyl-L-alanine amidase SRT_RS06925 PF04073 Aminoacyl-tRNA editing domain SRT_RS06940 PF00453 Ribosomal protein L20 SRT_RS06945 PF01632 Ribosomal protein L35 SRT_RS06985 PF08239 Bacterial SH3 domain SRT_RS06985 PF01183 Glycosyl hydrolases family 25 SRT_RS07030 PF00248 Aldo/keto reductase family SRT_RS07035 PF13411 MerR HTH family regulatory protein SRT_RS07040 PF00171 Aldehyde dehydrogenase family SRT_RS07050 PF00381 PTS HPr component phosphorylation site SRT_RS07060 PF00180 Isocitrate/isopropylmalate dehydrogenase SRT_RS07065 PF00285 Citrate synthase, C-terminal domain SRT_RS07070 PF00694 Aconitase C-terminal domain SRT_RS07070 PF00330 Aconitase family (aconitate hydratase) SRT_RS07075 PF00462 Glutaredoxin SRT_RS07080 PF00317 Ribonucleotide reductase, all-alpha domain SRT_RS07080 PF08343 Ribonucleotide reductase N-terminal SRT_RS07080 PF02867 Ribonucleotide reductase, barrel domain SRT_RS07090 PF00268 Ribonucleotide reductase, small chain SRT_RS07095 PF00202 Aminotransferase class-III SRT_RS07100 PF00696 Amino acid kinase family SRT_RS07105 PF01960 ArgJ family SRT_RS07110 PF02774 Semialdehyde dehydrogenase, dimerisation domain SRT_RS07110 PF01118 Semialdehyde dehydrogenase, NAD binding domain SRT_RS07115 PF02517 CPBP intramembrane metalloprotease SRT_RS07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS07145 PF00512 His Kinase A (phospho-acceptor) domain SRT_RS07150 PF00072 Response regulator receiver domain SRT_RS07150 PF00486 Transcriptional regulatory protein, C terminal SRT_RS07170 PF00005 ABC transporter SRT_RS07180 PF00005 ABC transporter SRT_RS07190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SRT_RS07190 PF02272 DHHA1 domain SRT_RS07190 PF01411 tRNA synthetases class II (A) SRT_RS07200 PF13145 PPIC-type PPIASE domain SRT_RS07205 PF01596 O-methyltransferase SRT_RS07210 PF00475 Imidazoleglycerol-phosphate dehydratase SRT_RS07220 PF01432 Peptidase family M3 SRT_RS07220 PF08439 Oligopeptidase F SRT_RS07235 PF00107 Zinc-binding dehydrogenase SRT_RS07235 PF08240 Alcohol dehydrogenase GroES-like domain SRT_RS07235 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS07235 PF00698 Acyl transferase domain SRT_RS07235 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS07235 PF08659 KR domain SRT_RS07235 PF14765 Polyketide synthase dehydratase SRT_RS07235 PF00550 Phosphopantetheine attachment site SRT_RS07235 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS07250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SRT_RS07260 PF02547 Queuosine biosynthesis protein SRT_RS07290 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SRT_RS07290 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SRT_RS07305 PF03772 Competence protein SRT_RS07305 PF13567 Domain of unknown function (DUF4131) SRT_RS07305 PF00753 Metallo-beta-lactamase superfamily SRT_RS07310 PF10531 SLBB domain SRT_RS07315 PF01553 Acyltransferase SRT_RS07320 PF01522 Polysaccharide deacetylase SRT_RS07330 PF05175 Methyltransferase small domain SRT_RS07365 PF00270 DEAD/DEAH box helicase SRT_RS07365 PF00271 Helicase conserved C-terminal domain SRT_RS07375 PF00746 LPXTG cell wall anchor motif SRT_RS07375 PF04650 YSIRK type signal peptide SRT_RS07375 PF17041 E domain SRT_RS07375 PF07501 G5 domain SRT_RS07380 PF16658 Class II release factor RF3, C-terminal domain SRT_RS07380 PF03144 Elongation factor Tu domain 2 SRT_RS07380 PF00009 Elongation factor Tu GTP binding domain SRT_RS07390 PF02875 Mur ligase family, glutamate ligase domain SRT_RS07390 PF08245 Mur ligase middle domain SRT_RS07390 PF01225 Mur ligase family, catalytic domain SRT_RS07395 PF01758 Sodium Bile acid symporter family SRT_RS07405 PF07478 D-ala D-ala ligase C-terminus SRT_RS07405 PF01820 D-ala D-ala ligase N-terminus SRT_RS07410 PF02132 RecR protein SRT_RS07410 PF13662 Toprim domain SRT_RS07415 PF03717 Penicillin-binding Protein dimerisation domain SRT_RS07415 PF00905 Penicillin binding protein transpeptidase domain SRT_RS07420 PF00300 Histidine phosphatase superfamily (branch 1) SRT_RS07440 PF01475 Ferric uptake regulator family SRT_RS07445 PF00440 Bacterial regulatory proteins, tetR family SRT_RS07460 PF00216 Bacterial DNA-binding protein SRT_RS07470 PF13472 GDSL-like Lipase/Acylhydrolase family SRT_RS07475 PF02645 Uncharacterised protein, DegV family COG1307 SRT_RS07480 PF13476 AAA domain SRT_RS07485 PF02863 Arginine repressor, C-terminal domain SRT_RS07485 PF01316 Arginine repressor, DNA binding domain SRT_RS07490 PF01728 FtsJ-like methyltransferase SRT_RS07490 PF01479 S4 domain SRT_RS07495 PF00348 Polyprenyl synthetase SRT_RS07500 PF02609 Exonuclease VII small subunit SRT_RS07505 PF13742 OB-fold nucleic acid binding domain SRT_RS07505 PF02601 Exonuclease VII, large subunit SRT_RS07510 PF06580 Histidine kinase SRT_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS07510 PF07694 5TMR of 5TMR-LYT SRT_RS07515 PF04397 LytTr DNA-binding domain SRT_RS07515 PF00072 Response regulator receiver domain SRT_RS07520 PF03788 LrgA family SRT_RS07525 PF04172 LrgB-like family SRT_RS07535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SRT_RS07535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SRT_RS07545 PF17910 FeoB cytosolic helical domain SRT_RS07545 PF07664 Ferrous iron transport protein B C terminus SRT_RS07545 PF07670 Nucleoside recognition SRT_RS07545 PF02421 Ferrous iron transport protein B SRT_RS07555 PF00005 ABC transporter SRT_RS07560 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS07565 PF08796 Protein of unknown function (DUF1797) SRT_RS07575 PF00004 ATPase family associated with various cellular activities (AAA) SRT_RS07575 PF10431 C-terminal, D2-small domain, of ClpB protein SRT_RS07575 PF17871 AAA lid domain SRT_RS07575 PF07724 AAA domain (Cdc48 subfamily) SRT_RS07590 PF06827 Zinc finger found in FPG and IleRS SRT_RS07590 PF08264 Anticodon-binding domain of tRNA SRT_RS07590 PF00133 tRNA synthetases class I (I, L, M and V) SRT_RS07595 PF05103 DivIVA protein SRT_RS07615 PF01168 Alanine racemase, N-terminal domain SRT_RS07620 PF00091 Tubulin/FtsZ family, GTPase domain SRT_RS07620 PF12327 FtsZ family, C-terminal domain SRT_RS07625 PF11983 Membrane-attachment and polymerisation-promoting switch SRT_RS07625 PF02491 SHS2 domain inserted in FTSA SRT_RS07635 PF04101 Glycosyltransferase family 28 C-terminal domain SRT_RS07635 PF03033 Glycosyltransferase family 28 N-terminal domain SRT_RS07650 PF03144 Elongation factor Tu domain 2 SRT_RS07650 PF00009 Elongation factor Tu GTP binding domain SRT_RS07650 PF00679 Elongation factor G C-terminus SRT_RS07650 PF14492 Elongation Factor G, domain II SRT_RS07660 PF00581 Rhodanese-like domain SRT_RS07665 PF00480 ROK family SRT_RS07685 PF00290 Tryptophan synthase alpha chain SRT_RS07690 PF00291 Pyridoxal-phosphate dependent enzyme SRT_RS07695 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SRT_RS07700 PF00218 Indole-3-glycerol phosphate synthase SRT_RS07710 PF00117 Glutamine amidotransferase class-I SRT_RS07715 PF04715 Anthranilate synthase component I, N terminal region SRT_RS07715 PF00425 chorismate binding enzyme SRT_RS07740 PF13411 MerR HTH family regulatory protein SRT_RS07745 PF00005 ABC transporter SRT_RS07745 PF00664 ABC transporter transmembrane region SRT_RS07750 PF00664 ABC transporter transmembrane region SRT_RS07750 PF00005 ABC transporter SRT_RS07760 PF04055 Radical SAM superfamily SRT_RS07765 PF06265 Protein of unknown function (DUF1027) SRT_RS07770 PF02872 5'-nucleotidase, C-terminal domain SRT_RS07785 PF06100 MCRA family SRT_RS07830 PF08220 DeoR-like helix-turn-helix domain SRT_RS07830 PF00455 DeoR C terminal sensor domain SRT_RS07855 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SRT_RS07855 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SRT_RS07860 PF00156 Phosphoribosyl transferase domain SRT_RS07865 PF04851 Type III restriction enzyme, res subunit SRT_RS07865 PF00271 Helicase conserved C-terminal domain SRT_RS07870 PF01205 Uncharacterized protein family UPF0029 SRT_RS07870 PF09186 Domain of unknown function (DUF1949) SRT_RS07880 PF00465 Iron-containing alcohol dehydrogenase SRT_RS07885 PF00923 Transaldolase/Fructose-6-phosphate aldolase SRT_RS07890 PF01228 Glycine radical SRT_RS07890 PF02901 Pyruvate formate lyase-like SRT_RS07900 PF08220 DeoR-like helix-turn-helix domain SRT_RS07900 PF00455 DeoR C terminal sensor domain SRT_RS07910 PF00575 S1 RNA binding domain SRT_RS07920 PF00072 Response regulator receiver domain SRT_RS07920 PF00196 Bacterial regulatory proteins, luxR family SRT_RS07925 PF00672 HAMP domain SRT_RS07925 PF07730 Histidine kinase SRT_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SRT_RS07945 PF01189 16S rRNA methyltransferase RsmB/F SRT_RS07945 PF01029 NusB family SRT_RS07950 PF02911 Formyl transferase, C-terminal domain SRT_RS07950 PF00551 Formyl transferase SRT_RS07960 PF01192 RNA polymerase Rpb6 SRT_RS07965 PF00625 Guanylate kinase SRT_RS07970 PF12072 Domain of unknown function (DUF3552) SRT_RS07970 PF00013 KH domain SRT_RS07970 PF01966 HD domain SRT_RS07975 PF02664 S-Ribosylhomocysteinase (LuxS) SRT_RS07980 PF18708 MapZ extracellular C-terminal domain 2 SRT_RS07980 PF18041 MapZ extracellular domain 1 SRT_RS07995 PF05103 DivIVA protein SRT_RS08000 PF06908 YspA SLOG family SRT_RS08005 PF03838 Recombination protein U SRT_RS08010 PF00912 Transglycosylase SRT_RS08010 PF00905 Penicillin binding protein transpeptidase domain SRT_RS08015 PF03051 Peptidase C1-like family SRT_RS08020 PF02540 NAD synthase SRT_RS08025 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SRT_RS08025 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SRT_RS08025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SRT_RS08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS08040 PF00005 ABC transporter SRT_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS08050 PF00497 Bacterial extracellular solute-binding proteins, family 3 SRT_RS08055 PF00271 Helicase conserved C-terminal domain SRT_RS08055 PF00270 DEAD/DEAH box helicase SRT_RS08060 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SRT_RS08060 PF00953 Glycosyl transferase family 4 SRT_RS08070 PF04977 Septum formation initiator SRT_RS08075 PF01795 MraW methylase family SRT_RS08090 PF00696 Amino acid kinase family SRT_RS08095 PF03413 Peptidase propeptide and YPEB domain SRT_RS08105 PF02092 Glycyl-tRNA synthetase beta subunit SRT_RS08110 PF02091 Glycyl-tRNA synthetase alpha subunit SRT_RS08130 PF01979 Amidohydrolase family SRT_RS08145 PF00072 Response regulator receiver domain SRT_RS08145 PF04397 LytTr DNA-binding domain SRT_RS08155 PF13732 Domain of unknown function (DUF4162) SRT_RS08155 PF00005 ABC transporter SRT_RS08175 PF00403 Heavy-metal-associated domain SRT_RS08180 PF03965 Penicillinase repressor SRT_RS08190 PF02033 Ribosome-binding factor A SRT_RS08195 PF11987 Translation-initiation factor 2 SRT_RS08195 PF04760 Translation initiation factor IF-2, N-terminal region SRT_RS08195 PF00009 Elongation factor Tu GTP binding domain SRT_RS08200 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SRT_RS08205 PF04296 Protein of unknown function (DUF448) SRT_RS08210 PF13184 NusA-like KH domain SRT_RS08210 PF08529 NusA N-terminal domain SRT_RS08210 PF00575 S1 RNA binding domain SRT_RS08215 PF17384 RimP C-terminal SH3 domain SRT_RS08215 PF02576 RimP N-terminal domain SRT_RS08225 PF02390 Putative methyltransferase SRT_RS08240 PF00005 ABC transporter SRT_RS08245 PF01230 HIT domain SRT_RS08255 PF03816 Cell envelope-related transcriptional attenuator domain SRT_RS08260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRT_RS08265 PF00860 Permease family SRT_RS08290 PF00817 impB/mucB/samB family SRT_RS08290 PF11799 impB/mucB/samB family C-terminal domain SRT_RS08290 PF11798 IMS family HHH motif SRT_RS08305 PF00144 Beta-lactamase SRT_RS08315 PF00230 Major intrinsic protein SRT_RS08320 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SRT_RS08320 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SRT_RS08320 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SRT_RS08325 PF02575 YbaB/EbfC DNA-binding family SRT_RS08330 PF04394 Protein of unknown function, DUF536 SRT_RS08330 PF08279 HTH domain SRT_RS08355 PF00814 Glycoprotease family SRT_RS08360 PF00583 Acetyltransferase (GNAT) family SRT_RS08365 PF00814 Glycoprotease family SRT_RS08375 PF01370 NAD dependent epimerase/dehydratase family SRT_RS08400 PF00202 Aminotransferase class-III SRT_RS08415 PF13649 Methyltransferase domain SRT_RS08430 PF00005 ABC transporter SRT_RS08440 PF07288 Protein of unknown function (DUF1447) SRT_RS08445 PF17770 Ribonuclease J C-terminal domain SRT_RS08445 PF00753 Metallo-beta-lactamase superfamily SRT_RS08445 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SRT_RS08450 PF01476 LysM domain SRT_RS08450 PF05257 CHAP domain SRT_RS08455 PF07992 Pyridine nucleotide-disulphide oxidoreductase SRT_RS08455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SRT_RS08460 PF01645 Conserved region in glutamate synthase SRT_RS08460 PF04898 Glutamate synthase central domain SRT_RS08460 PF00310 Glutamine amidotransferases class-II SRT_RS08460 PF01493 GXGXG motif SRT_RS08465 PF03951 Glutamine synthetase, beta-Grasp domain SRT_RS08465 PF00120 Glutamine synthetase, catalytic domain SRT_RS08470 PF13411 MerR HTH family regulatory protein SRT_RS08480 PF00162 Phosphoglycerate kinase SRT_RS08485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SRT_RS08485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SRT_RS08490 PF03144 Elongation factor Tu domain 2 SRT_RS08490 PF03764 Elongation factor G, domain IV SRT_RS08490 PF14492 Elongation Factor G, domain II SRT_RS08490 PF00679 Elongation factor G C-terminus SRT_RS08490 PF00009 Elongation factor Tu GTP binding domain SRT_RS08495 PF00177 Ribosomal protein S7p/S5e SRT_RS08500 PF00164 Ribosomal protein S12/S23 SRT_RS08510 PF09182 Bacterial purine repressor, N-terminal SRT_RS08510 PF00156 Phosphoribosyl transferase domain SRT_RS08515 PF01336 OB-fold nucleic acid binding domain SRT_RS08515 PF01966 HD domain SRT_RS08535 PF16745 RsgA N-terminal domain SRT_RS08535 PF03193 RsgA GTPase SRT_RS08585 PF00398 Ribosomal RNA adenine dimethylase SRT_RS08600 PF13331 Domain of unknown function (DUF4093) SRT_RS08605 PF01026 TatD related DNase SRT_RS08610 PF00468 Ribosomal protein L34 SRT_RS08625 PF02096 60Kd inner membrane protein SRT_RS08630 PF00825 Ribonuclease P SRT_RS08635 PF14698 Argininosuccinate lyase C-terminal SRT_RS08635 PF00206 Lyase SRT_RS08640 PF00764 Arginosuccinate synthase SRT_RS08655 PF02829 3H domain SRT_RS08655 PF08279 HTH domain SRT_RS08660 PF00749 tRNA synthetases class I (E and Q), catalytic domain SRT_RS08665 PF01987 Mitochondrial biogenesis AIM24 SRT_RS08670 PF00484 Carbonic anhydrase SRT_RS08675 PF18073 Rubredoxin metal binding domain SRT_RS08685 PF00692 dUTPase SRT_RS08690 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SRT_RS08690 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SRT_RS08695 PF00483 Nucleotidyl transferase SRT_RS08700 PF01694 Rhomboid family SRT_RS08705 PF01812 5-formyltetrahydrofolate cyclo-ligase family SRT_RS08715 PF07687 Peptidase dimerisation domain SRT_RS08715 PF01546 Peptidase family M20/M25/M40 SRT_RS08720 PF14602 Hexapeptide repeat of succinyl-transferase SRT_RS08720 PF00132 Bacterial transferase hexapeptide (six repeats) SRT_RS08720 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SRT_RS08740 PF03829 PTS system glucitol/sorbitol-specific IIA component SRT_RS08745 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SRT_RS08745 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SRT_RS08750 PF03608 PTS system enzyme II sorbitol-specific factor SRT_RS08760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS08760 PF05043 Mga helix-turn-helix domain SRT_RS08760 PF00874 PRD domain SRT_RS08760 PF08279 HTH domain SRT_RS08765 PF00106 short chain dehydrogenase SRT_RS08770 PF00342 Phosphoglucose isomerase SRT_RS08800 PF14437 MafB19-like deaminase SRT_RS08805 PF12706 Beta-lactamase superfamily domain SRT_RS08820 PF01702 Queuine tRNA-ribosyltransferase SRT_RS08830 PF13380 CoA binding domain SRT_RS08835 PF01367 5'-3' exonuclease, C-terminal SAM fold SRT_RS08835 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SRT_RS08835 PF00476 DNA polymerase family A SRT_RS08860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SRT_RS08860 PF12833 Helix-turn-helix domain SRT_RS08865 PF00456 Transketolase, thiamine diphosphate binding domain SRT_RS08865 PF02780 Transketolase, C-terminal domain SRT_RS08865 PF02779 Transketolase, pyrimidine binding domain SRT_RS08875 PF03611 PTS system sugar-specific permease component SRT_RS08930 PF00132 Bacterial transferase hexapeptide (six repeats) SRT_RS08935 PF00218 Indole-3-glycerol phosphate synthase SRT_RS08940 PF00591 Glycosyl transferase family, a/b domain SRT_RS08940 PF02885 Glycosyl transferase family, helical bundle domain SRT_RS08945 PF00117 Glutamine amidotransferase class-I SRT_RS08950 PF00425 chorismate binding enzyme SRT_RS08950 PF04715 Anthranilate synthase component I, N terminal region SRT_RS08965 PF00664 ABC transporter transmembrane region SRT_RS08965 PF00005 ABC transporter SRT_RS08965 PF03412 Peptidase C39 family SRT_RS09000 PF00596 Class II Aldolase and Adducin N-terminal domain SRT_RS09005 PF01261 Xylose isomerase-like TIM barrel SRT_RS09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SRT_RS09015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SRT_RS09020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SRT_RS09025 PF03611 PTS system sugar-specific permease component SRT_RS09030 PF00709 Adenylosuccinate synthetase SRT_RS09035 PF18419 ATP-grasp-like domain SRT_RS09035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SRT_RS09035 PF04262 Glutamate-cysteine ligase SRT_RS09045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRT_RS09045 PF00005 ABC transporter SRT_RS09050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SRT_RS09050 PF00005 ABC transporter SRT_RS09055 PF12911 N-terminal TM domain of oligopeptide transport permease C SRT_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS09065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SRT_RS09070 PF07943 Penicillin-binding protein 5, C-terminal domain SRT_RS09070 PF00768 D-alanyl-D-alanine carboxypeptidase SRT_RS09080 PF01458 Uncharacterized protein family (UPF0051) SRT_RS09085 PF01592 NifU-like N terminal domain SRT_RS09090 PF00266 Aminotransferase class-V SRT_RS09095 PF01458 Uncharacterized protein family (UPF0051) SRT_RS09100 PF00005 ABC transporter SRT_RS09105 PF00953 Glycosyl transferase family 4 SRT_RS09110 PF05389 Negative regulator of genetic competence (MecA) SRT_RS09115 PF02673 Bacitracin resistance protein BacA SRT_RS09125 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS09130 PF00005 ABC transporter SRT_RS09140 PF00005 ABC transporter SRT_RS09150 PF00440 Bacterial regulatory proteins, tetR family SRT_RS09160 PF00585 C-terminal regulatory domain of Threonine dehydratase SRT_RS09160 PF00291 Pyridoxal-phosphate dependent enzyme SRT_RS09165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SRT_RS09165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SRT_RS09170 PF01842 ACT domain SRT_RS09170 PF10369 Small subunit of acetolactate synthase SRT_RS09175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SRT_RS09175 PF00205 Thiamine pyrophosphate enzyme, central domain SRT_RS09175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SRT_RS09180 PF02734 DAK2 domain SRT_RS09180 PF13684 Dihydroxyacetone kinase family SRT_RS09185 PF03780 Asp23 family, cell envelope-related function SRT_RS09285 PF01196 Ribosomal protein L17 SRT_RS09295 PF00411 Ribosomal protein S11 SRT_RS09300 PF00416 Ribosomal protein S13/S18 SRT_RS09305 PF00444 Ribosomal protein L36 SRT_RS09310 PF01176 Translation initiation factor 1A / IF-1 SRT_RS09325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SRT_RS09330 PF00327 Ribosomal protein L30p/L7e SRT_RS09335 PF00333 Ribosomal protein S5, N-terminal domain SRT_RS09335 PF03719 Ribosomal protein S5, C-terminal domain SRT_RS09340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SRT_RS09345 PF00347 Ribosomal protein L6 SRT_RS09355 PF00253 Ribosomal protein S14p/S29e SRT_RS09360 PF00281 Ribosomal protein L5 SRT_RS09360 PF00673 ribosomal L5P family C-terminus SRT_RS09370 PF00238 Ribosomal protein L14p/L23e SRT_RS09375 PF00366 Ribosomal protein S17 SRT_RS09380 PF00831 Ribosomal L29 protein SRT_RS09385 PF00252 Ribosomal protein L16p/L10e SRT_RS09390 PF00189 Ribosomal protein S3, C-terminal domain SRT_RS09390 PF07650 KH domain SRT_RS09395 PF00237 Ribosomal protein L22p/L17e SRT_RS09400 PF00203 Ribosomal protein S19 SRT_RS09405 PF03947 Ribosomal Proteins L2, C-terminal domain SRT_RS09405 PF00181 Ribosomal Proteins L2, RNA binding domain SRT_RS09410 PF00276 Ribosomal protein L23 SRT_RS09415 PF00573 Ribosomal protein L4/L1 family SRT_RS09425 PF00338 Ribosomal protein S10p/S20e SRT_RS09435 PF02435 Levansucrase/Invertase SRT_RS09440 PF02861 Clp amino terminal domain, pathogenicity island component SRT_RS09440 PF17871 AAA lid domain SRT_RS09440 PF07724 AAA domain (Cdc48 subfamily) SRT_RS09440 PF00004 ATPase family associated with various cellular activities (AAA) SRT_RS09440 PF10431 C-terminal, D2-small domain, of ClpB protein SRT_RS09445 PF05848 CtsR N-terminal HTH domain SRT_RS09445 PF17727 CtsR C-terminal dimerization domain SRT_RS09455 PF07690 Major Facilitator Superfamily SRT_RS09475 PF16197 Ketoacyl-synthetase C-terminal extension SRT_RS09475 PF00109 Beta-ketoacyl synthase, N-terminal domain SRT_RS09475 PF00698 Acyl transferase domain SRT_RS09475 PF00668 Condensation domain SRT_RS09475 PF02801 Beta-ketoacyl synthase, C-terminal domain SRT_RS09475 PF00550 Phosphopantetheine attachment site SRT_RS09480 PF00501 AMP-binding enzyme SRT_RS09480 PF00550 Phosphopantetheine attachment site SRT_RS09480 PF00668 Condensation domain SRT_RS09480 PF13193 AMP-binding enzyme C-terminal domain SRT_RS09500 PF00889 Elongation factor TS SRT_RS09505 PF00318 Ribosomal protein S2 SRT_RS09520 PF17676 LD-carboxypeptidase C-terminal domain SRT_RS09520 PF02016 LD-carboxypeptidase N-terminal domain SRT_RS09525 PF05649 Peptidase family M13 SRT_RS09525 PF01431 Peptidase family M13 SRT_RS09560 PF00005 ABC transporter SRT_RS09595 PF00005 ABC transporter SRT_RS09595 PF12704 MacB-like periplasmic core domain SRT_RS09595 PF02687 FtsX-like permease family SRT_RS09600 PF00664 ABC transporter transmembrane region SRT_RS09600 PF00005 ABC transporter SRT_RS09610 PF00664 ABC transporter transmembrane region SRT_RS09610 PF00005 ABC transporter SRT_RS09620 PF00128 Alpha amylase, catalytic domain SRT_RS09620 PF16657 Maltogenic Amylase, C-terminal domain SRT_RS09625 PF00367 phosphotransferase system, EIIB SRT_RS09625 PF02378 Phosphotransferase system, EIIC SRT_RS09635 PF00746 LPXTG cell wall anchor motif SRT_RS09635 PF13199 Glycosyl hydrolase family 66 SRT_RS09640 PF02580 D-Tyr-tRNA(Tyr) deacylase SRT_RS09645 PF02824 TGS domain SRT_RS09645 PF13291 ACT domain SRT_RS09645 PF04607 Region found in RelA / SpoT proteins SRT_RS09650 PF03372 Endonuclease/Exonuclease/phosphatase family SRT_RS09665 PF04452 RNA methyltransferase SRT_RS09690 PF12002 MgsA AAA+ ATPase C terminal SRT_RS09690 PF16193 AAA C-terminal domain SRT_RS09690 PF05496 Holliday junction DNA helicase RuvB P-loop domain SRT_RS09715 PF01648 4'-phosphopantetheinyl transferase superfamily SRT_RS09725 PF00005 ABC transporter SRT_RS09725 PF02687 FtsX-like permease family SRT_RS09725 PF12704 MacB-like periplasmic core domain SRT_RS09735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SRT_RS09735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SRT_RS09765 PF02687 FtsX-like permease family SRT_RS09765 PF00005 ABC transporter SRT_RS09765 PF12704 MacB-like periplasmic core domain SRT_RS09770 PF13411 MerR HTH family regulatory protein SRT_RS09770 PF07739 TipAS antibiotic-recognition domain SRT_RS09775 PF03601 Conserved hypothetical protein 698 SRT_RS09780 PF00762 Ferrochelatase SRT_RS09785 PF09586 Bacterial membrane protein YfhO SRT_RS09790 PF16363 GDP-mannose 4,6 dehydratase SRT_RS09800 PF00535 Glycosyl transferase family 2 SRT_RS09805 PF02535 ZIP Zinc transporter SRT_RS09810 PF03883 Peroxide stress protein YaaA SRT_RS09830 PF13597 Anaerobic ribonucleoside-triphosphate reductase SRT_RS09830 PF03477 ATP cone domain SRT_RS09845 PF06949 Protein of unknown function (DUF1292) SRT_RS09850 PF03652 Holliday junction resolvase SRT_RS09855 PF06135 IreB regulatory phosphoprotein SRT_RS09880 PF03960 ArsC family SRT_RS09885 PF00154 recA bacterial DNA recombination protein SRT_RS09890 PF02464 Competence-damaged protein SRT_RS09890 PF18146 Damage-inducible protein CinA KH domain SRT_RS09890 PF00994 Probable molybdopterin binding domain SRT_RS09895 PF03352 Methyladenine glycosylase SRT_RS09895 PF00117 Glutamine amidotransferase class-I SRT_RS09895 PF00958 GMP synthase C terminal domain SRT_RS09895 PF13673 Acetyltransferase (GNAT) domain SRT_RS09895 PF13302 Acetyltransferase (GNAT) domain SRT_RS09900 PF01330 RuvA N terminal domain SRT_RS09900 PF07499 RuvA, C-terminal domain SRT_RS09905 PF08676 MutL C terminal dimerisation domain SRT_RS09905 PF01119 DNA mismatch repair protein, C-terminal domain SRT_RS09910 PF01624 MutS domain I SRT_RS09910 PF05188 MutS domain II SRT_RS09910 PF05190 MutS family domain IV SRT_RS09910 PF05192 MutS domain III SRT_RS09910 PF00488 MutS domain V SRT_RS09915 PF06133 Control of competence regulator ComK, YlbF/YmcA SRT_RS09920 PF01316 Arginine repressor, DNA binding domain SRT_RS09920 PF02863 Arginine repressor, C-terminal domain SRT_RS09925 PF00750 tRNA synthetases class I (R) SRT_RS09925 PF05746 DALR anticodon binding domain SRT_RS09925 PF03485 Arginyl tRNA synthetase N terminal domain SRT_RS09935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SRT_RS09935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SRT_RS09940 PF01336 OB-fold nucleic acid binding domain SRT_RS09940 PF02938 GAD domain SRT_RS09940 PF00152 tRNA synthetases class II (D, K and N) SRT_RS09945 PF13393 Histidyl-tRNA synthetase SRT_RS09945 PF03129 Anticodon binding domain SRT_RS09975 PF01022 Bacterial regulatory protein, arsR family SRT_RS10000 PF02324 Glycosyl hydrolase family 70 SRT_RS10000 PF01473 Putative cell wall binding repeat SRT_RS10010 PF00535 Glycosyl transferase family 2 SRT_RS10030 PF09278 MerR, DNA binding SRT_RS10030 PF00376 MerR family regulatory protein SRT_RS10035 PF00106 short chain dehydrogenase SRT_RS10040 PF00571 CBS domain SRT_RS10040 PF00005 ABC transporter SRT_RS10045 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS10050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SRT_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component SRT_RS10060 PF02245 Methylpurine-DNA glycosylase (MPG) SRT_RS10080 PF00171 Aldehyde dehydrogenase family SRT_RS10085 PF00920 Dehydratase family SRT_RS10090 PF01883 Iron-sulfur cluster assembly protein SRT_RS10100 PF01061 ABC-2 type transporter SRT_RS10100 PF01061 ABC-2 type transporter SRT_RS10110 PF00163 Ribosomal protein S4/S9 N-terminal domain SRT_RS10110 PF01479 S4 domain SRT_RS10120 PF03796 DnaB-like helicase C terminal domain SRT_RS10120 PF00772 DnaB-like helicase N terminal domain SRT_RS10125 PF01281 Ribosomal protein L9, N-terminal domain SRT_RS10125 PF03948 Ribosomal protein L9, C-terminal domain SRT_RS10130 PF01368 DHH family SRT_RS10130 PF02272 DHHA1 domain SRT_RS10135 PF01134 Glucose inhibited division protein A SRT_RS10135 PF13932 GidA associated domain SRT_RS10155 PF08239 Bacterial SH3 domain SRT_RS10155 PF00877 NlpC/P60 family SRT_RS10155 PF01476 LysM domain SRT_RS10160 PF02361 Cobalt transport protein SRT_RS10165 PF00005 ABC transporter SRT_RS10170 PF00005 ABC transporter SRT_RS10175 PF01066 CDP-alcohol phosphatidyltransferase SRT_RS10200 PF02463 RecF/RecN/SMC N terminal domain SRT_RS10205 PF00478 IMP dehydrogenase / GMP reductase domain SRT_RS10205 PF00571 CBS domain SRT_RS10215 PF12848 ABC transporter SRT_RS10215 PF00005 ABC transporter SRT_RS10250 PF02590 Predicted SPOUT methyltransferase SRT_RS10255 PF13180 PDZ domain SRT_RS10260 PF02195 ParB-like nuclease domain SRT_RS10260 PF17762 HTH domain found in ParB protein