locus-tag class description SUB_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SUB_RS00005 PF00308 Bacterial dnaA protein SUB_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SUB_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SUB_RS00010 PF02767 DNA polymerase III beta subunit, central domain SUB_RS00015 PF06107 Bacterial protein of unknown function (DUF951) SUB_RS00020 PF01381 Helix-turn-helix SUB_RS00025 PF06071 Protein of unknown function (DUF933) SUB_RS00025 PF01926 50S ribosome-binding GTPase SUB_RS00030 PF01195 Peptidyl-tRNA hydrolase SUB_RS00035 PF17757 UvrB interaction domain SUB_RS00035 PF00270 DEAD/DEAH box helicase SUB_RS00035 PF00271 Helicase conserved C-terminal domain SUB_RS00035 PF03461 TRCF domain SUB_RS00035 PF02559 CarD-like/TRCF domain SUB_RS00040 PF01943 Polysaccharide biosynthesis protein SUB_RS00040 PF14667 Polysaccharide biosynthesis C-terminal domain SUB_RS00045 PF01479 S4 domain SUB_RS00060 PF01171 PP-loop family SUB_RS00065 PF00156 Phosphoribosyl transferase domain SUB_RS00070 PF06480 FtsH Extracellular SUB_RS00070 PF17862 AAA+ lid domain SUB_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) SUB_RS00070 PF01434 Peptidase family M41 SUB_RS00075 PF13520 Amino acid permease SUB_RS00195 PF01476 LysM domain SUB_RS00195 PF05257 CHAP domain SUB_RS00200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SUB_RS00200 PF14572 Phosphoribosyl synthetase-associated domain SUB_RS00205 PF00155 Aminotransferase class I and II SUB_RS00210 PF11967 Recombination protein O N terminal SUB_RS00210 PF02565 Recombination protein O C terminal SUB_RS00215 PF02504 Fatty acid synthesis protein SUB_RS00220 PF00550 Phosphopantetheine attachment site SUB_RS00225 PF01259 SAICAR synthetase SUB_RS00230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SUB_RS00230 PF00586 AIR synthase related protein, N-terminal domain SUB_RS00230 PF02769 AIR synthase related protein, C-terminal domain SUB_RS00235 PF00156 Phosphoribosyl transferase domain SUB_RS00235 PF13537 Glutamine amidotransferase domain SUB_RS00240 PF02769 AIR synthase related protein, C-terminal domain SUB_RS00240 PF00586 AIR synthase related protein, N-terminal domain SUB_RS00245 PF00551 Formyl transferase SUB_RS00250 PF02142 MGS-like domain SUB_RS00250 PF01808 AICARFT/IMPCHase bienzyme SUB_RS00260 PF09221 Bacteriocin class IId cyclical uberolysin-like SUB_RS00275 PF00005 ABC transporter SUB_RS00285 PF07702 UTRA domain SUB_RS00285 PF00392 Bacterial regulatory proteins, gntR family SUB_RS00290 PF01380 SIS domain SUB_RS00295 PF01791 DeoC/LacD family aldolase SUB_RS00300 PF00392 Bacterial regulatory proteins, gntR family SUB_RS00305 PF01301 Glycosyl hydrolases family 35 SUB_RS00310 PF03830 PTS system sorbose subfamily IIB component SUB_RS00315 PF03609 PTS system sorbose-specific iic component SUB_RS00320 PF03613 PTS system mannose/fructose/sorbose family IID component SUB_RS00330 PF08460 Bacterial SH3 domain SUB_RS00330 PF05257 CHAP domain SUB_RS00330 PF01520 N-acetylmuramoyl-L-alanine amidase SUB_RS00345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SUB_RS00345 PF02843 Phosphoribosylglycinamide synthetase, C domain SUB_RS00345 PF02844 Phosphoribosylglycinamide synthetase, N domain SUB_RS00350 PF00731 AIR carboxylase SUB_RS00355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUB_RS00355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SUB_RS00355 PF02222 ATP-grasp domain SUB_RS00360 PF10397 Adenylosuccinate lyase C-terminus SUB_RS00360 PF00206 Lyase SUB_RS00370 PF05491 RuvB C-terminal winged helix domain SUB_RS00370 PF05496 Holliday junction DNA helicase RuvB P-loop domain SUB_RS00370 PF17864 RuvB AAA lid domain SUB_RS00375 PF01451 Low molecular weight phosphotyrosine protein phosphatase SUB_RS00385 PF01757 Acyltransferase family SUB_RS00390 PF00465 Iron-containing alcohol dehydrogenase SUB_RS00390 PF00171 Aldehyde dehydrogenase family SUB_RS00400 PF14821 Threonine synthase N terminus SUB_RS00400 PF00291 Pyridoxal-phosphate dependent enzyme SUB_RS00405 PF01554 MatE SUB_RS00410 PF00338 Ribosomal protein S10p/S20e SUB_RS00415 PF00297 Ribosomal protein L3 SUB_RS00420 PF00573 Ribosomal protein L4/L1 family SUB_RS00425 PF00276 Ribosomal protein L23 SUB_RS00430 PF00181 Ribosomal Proteins L2, RNA binding domain SUB_RS00430 PF03947 Ribosomal Proteins L2, C-terminal domain SUB_RS00435 PF00203 Ribosomal protein S19 SUB_RS00440 PF00237 Ribosomal protein L22p/L17e SUB_RS00445 PF00189 Ribosomal protein S3, C-terminal domain SUB_RS00445 PF07650 KH domain SUB_RS00450 PF00252 Ribosomal protein L16p/L10e SUB_RS00455 PF00831 Ribosomal L29 protein SUB_RS00460 PF00366 Ribosomal protein S17 SUB_RS00465 PF00238 Ribosomal protein L14p/L23e SUB_RS00470 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SUB_RS00470 PF00467 KOW motif SUB_RS00475 PF00673 ribosomal L5P family C-terminus SUB_RS00475 PF00281 Ribosomal protein L5 SUB_RS00480 PF00253 Ribosomal protein S14p/S29e SUB_RS00485 PF00410 Ribosomal protein S8 SUB_RS00490 PF00347 Ribosomal protein L6 SUB_RS00495 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SUB_RS00500 PF00333 Ribosomal protein S5, N-terminal domain SUB_RS00500 PF03719 Ribosomal protein S5, C-terminal domain SUB_RS00505 PF00327 Ribosomal protein L30p/L7e SUB_RS00510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SUB_RS00515 PF00344 SecY translocase SUB_RS00525 PF01176 Translation initiation factor 1A / IF-1 SUB_RS00530 PF00416 Ribosomal protein S13/S18 SUB_RS00535 PF00411 Ribosomal protein S11 SUB_RS00540 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SUB_RS00540 PF01000 RNA polymerase Rpb3/RpoA insert domain SUB_RS00540 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SUB_RS00545 PF01196 Ribosomal protein L17 SUB_RS00630 PF03413 Peptidase propeptide and YPEB domain SUB_RS00645 PF08240 Alcohol dehydrogenase GroES-like domain SUB_RS00645 PF00107 Zinc-binding dehydrogenase SUB_RS00645 PF13823 Alcohol dehydrogenase GroES-associated SUB_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS00660 PF01654 Cytochrome bd terminal oxidase subunit I SUB_RS00665 PF02322 Cytochrome bd terminal oxidase subunit II SUB_RS00670 PF00005 ABC transporter SUB_RS00670 PF00664 ABC transporter transmembrane region SUB_RS00675 PF00664 ABC transporter transmembrane region SUB_RS00675 PF00005 ABC transporter SUB_RS00680 PF00348 Polyprenyl synthetase SUB_RS00685 PF00288 GHMP kinases N terminal domain SUB_RS00685 PF08544 GHMP kinases C terminal SUB_RS00690 PF01047 MarR family SUB_RS00695 PF00005 ABC transporter SUB_RS00700 PF00950 ABC 3 transport family SUB_RS00705 PF01479 S4 domain SUB_RS00705 PF00579 tRNA synthetases class I (W and Y) SUB_RS00710 PF00912 Transglycosylase SUB_RS00710 PF00905 Penicillin binding protein transpeptidase domain SUB_RS00715 PF04561 RNA polymerase Rpb2, domain 2 SUB_RS00715 PF04560 RNA polymerase Rpb2, domain 7 SUB_RS00715 PF00562 RNA polymerase Rpb2, domain 6 SUB_RS00715 PF10385 RNA polymerase beta subunit external 1 domain SUB_RS00715 PF04565 RNA polymerase Rpb2, domain 3 SUB_RS00715 PF04563 RNA polymerase beta subunit SUB_RS00720 PF00623 RNA polymerase Rpb1, domain 2 SUB_RS00720 PF05000 RNA polymerase Rpb1, domain 4 SUB_RS00720 PF04983 RNA polymerase Rpb1, domain 3 SUB_RS00720 PF04998 RNA polymerase Rpb1, domain 5 SUB_RS00720 PF04997 RNA polymerase Rpb1, domain 1 SUB_RS00730 PF00437 Type II/IV secretion system protein SUB_RS00735 PF00482 Type II secretion system (T2SS), protein F SUB_RS00740 PF07963 Prokaryotic N-terminal methylation motif SUB_RS00770 PF00871 Acetokinase family SUB_RS00785 PF02517 CPBP intramembrane metalloprotease SUB_RS00790 PF14748 Pyrroline-5-carboxylate reductase dimerisation SUB_RS00790 PF03807 NADP oxidoreductase coenzyme F420-dependent SUB_RS00795 PF05343 M42 glutamyl aminopeptidase SUB_RS00805 PF00085 Thioredoxin SUB_RS00810 PF01588 Putative tRNA binding domain SUB_RS00810 PF14794 Domain of unknown function (DUF4479) SUB_RS00815 PF02368 Bacterial Ig-like domain (group 2) SUB_RS00815 PF00251 Glycosyl hydrolases family 32 N-terminal domain SUB_RS00815 PF02210 Laminin G domain SUB_RS00815 PF08244 Glycosyl hydrolases family 32 C terminal SUB_RS00820 PF00436 Single-strand binding protein family SUB_RS00835 PF02653 Branched-chain amino acid transport system / permease component SUB_RS00840 PF00005 ABC transporter SUB_RS00845 PF01712 Deoxynucleoside kinase SUB_RS00850 PF01207 Dihydrouridine synthase (Dus) SUB_RS00855 PF01430 Hsp33 protein SUB_RS00870 PF04262 Glutamate-cysteine ligase SUB_RS00870 PF02655 ATP-grasp domain SUB_RS00870 PF18419 ATP-grasp-like domain SUB_RS00895 PF00709 Adenylosuccinate synthetase SUB_RS00905 PF02608 ABC transporter substrate-binding protein PnrA-like SUB_RS00910 PF04055 Radical SAM superfamily SUB_RS00915 PF00455 DeoR C terminal sensor domain SUB_RS00915 PF08220 DeoR-like helix-turn-helix domain SUB_RS00920 PF04198 Putative sugar-binding domain SUB_RS00925 PF01042 Endoribonuclease L-PSP SUB_RS00930 PF01228 Glycine radical SUB_RS00930 PF02901 Pyruvate formate lyase-like SUB_RS00935 PF00923 Transaldolase/Fructose-6-phosphate aldolase SUB_RS00940 PF00893 Small Multidrug Resistance protein SUB_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS00950 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS00955 PF04608 Phosphatidylglycerophosphatase A SUB_RS00980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUB_RS00980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SUB_RS00985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SUB_RS00990 PF13847 Methyltransferase domain SUB_RS01030 PF07730 Histidine kinase SUB_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS01035 PF00196 Bacterial regulatory proteins, luxR family SUB_RS01035 PF00072 Response regulator receiver domain SUB_RS01055 PF03609 PTS system sorbose-specific iic component SUB_RS01060 PF03613 PTS system mannose/fructose/sorbose family IID component SUB_RS01075 PF00672 HAMP domain SUB_RS01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS01075 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS01080 PF00486 Transcriptional regulatory protein, C terminal SUB_RS01080 PF00072 Response regulator receiver domain SUB_RS01090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS01095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SUB_RS01100 PF02378 Phosphotransferase system, EIIC SUB_RS01105 PF00232 Glycosyl hydrolase family 1 SUB_RS01110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SUB_RS01110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SUB_RS01115 PF00232 Glycosyl hydrolase family 1 SUB_RS01120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SUB_RS01120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SUB_RS01125 PF00989 PAS fold SUB_RS01125 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS01125 PF00672 HAMP domain SUB_RS01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS01125 PF18698 Histidine kinase sensor domain SUB_RS01130 PF00072 Response regulator receiver domain SUB_RS01130 PF00486 Transcriptional regulatory protein, C terminal SUB_RS01135 PF00005 ABC transporter SUB_RS01140 PF02687 FtsX-like permease family SUB_RS01165 PF03641 Possible lysine decarboxylase SUB_RS01185 PF12002 MgsA AAA+ ATPase C terminal SUB_RS01185 PF16193 AAA C-terminal domain SUB_RS01185 PF05496 Holliday junction DNA helicase RuvB P-loop domain SUB_RS01245 PF14659 Phage integrase, N-terminal SAM-like domain SUB_RS01245 PF00589 Phage integrase family SUB_RS01260 PF04452 RNA methyltransferase SUB_RS01265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SUB_RS01265 PF00356 Bacterial regulatory proteins, lacI family SUB_RS01270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SUB_RS01270 PF02378 Phosphotransferase system, EIIC SUB_RS01270 PF00367 phosphotransferase system, EIIB SUB_RS01275 PF03372 Endonuclease/Exonuclease/phosphatase family SUB_RS01285 PF05343 M42 glutamyl aminopeptidase SUB_RS01290 PF07972 NrdI Flavodoxin like SUB_RS01295 PF00149 Calcineurin-like phosphoesterase SUB_RS01295 PF02872 5'-nucleotidase, C-terminal domain SUB_RS01300 PF04607 Region found in RelA / SpoT proteins SUB_RS01300 PF13291 ACT domain SUB_RS01300 PF02824 TGS domain SUB_RS01305 PF02580 D-Tyr-tRNA(Tyr) deacylase SUB_RS01310 PF13556 PucR C-terminal helix-turn-helix domain SUB_RS01315 PF17912 MalK OB fold domain SUB_RS01315 PF00005 ABC transporter SUB_RS01315 PF03459 TOBE domain SUB_RS01320 PF00128 Alpha amylase, catalytic domain SUB_RS01335 PF16363 GDP-mannose 4,6 dehydratase SUB_RS01345 PF02699 Preprotein translocase subunit SUB_RS01350 PF01255 Putative undecaprenyl diphosphate synthase SUB_RS01360 PF02163 Peptidase family M50 SUB_RS01360 PF13180 PDZ domain SUB_RS01365 PF03129 Anticodon binding domain SUB_RS01365 PF04073 Aminoacyl-tRNA editing domain SUB_RS01365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUB_RS01375 PF07733 Bacterial DNA polymerase III alpha NTPase domain SUB_RS01375 PF02811 PHP domain SUB_RS01375 PF14480 DNA polymerase III polC-type N-terminus I SUB_RS01375 PF00929 Exonuclease SUB_RS01375 PF11490 DNA polymerase III polC-type N-terminus II SUB_RS01375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SUB_RS01385 PF03358 NADPH-dependent FMN reductase SUB_RS01390 PF01327 Polypeptide deformylase SUB_RS01400 PF13089 Polyphosphate kinase N-terminal domain SUB_RS01400 PF17941 Polyphosphate kinase C-terminal domain 1 SUB_RS01400 PF13090 Polyphosphate kinase C-terminal domain 2 SUB_RS01400 PF02503 Polyphosphate kinase middle domain SUB_RS01420 PF00312 Ribosomal protein S15 SUB_RS01425 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SUB_RS01425 PF01138 3' exoribonuclease family, domain 1 SUB_RS01425 PF03725 3' exoribonuclease family, domain 2 SUB_RS01425 PF00013 KH domain SUB_RS01425 PF00575 S1 RNA binding domain SUB_RS01435 PF06426 Serine acetyltransferase, N-terminal SUB_RS01435 PF00132 Bacterial transferase hexapeptide (six repeats) SUB_RS01440 PF09190 DALR domain SUB_RS01440 PF01406 tRNA synthetases class I (C) catalytic domain SUB_RS01445 PF00636 Ribonuclease III domain SUB_RS01455 PF00588 SpoU rRNA Methylase family SUB_RS01455 PF08032 RNA 2'-O ribose methyltransferase substrate binding SUB_RS01465 PF02645 Uncharacterised protein, DegV family COG1307 SUB_RS01470 PF00572 Ribosomal protein L13 SUB_RS01475 PF00380 Ribosomal protein S9/S16 SUB_RS01485 PF12161 HsdM N-terminal domain SUB_RS01485 PF02384 N-6 DNA Methylase SUB_RS01490 PF01420 Type I restriction modification DNA specificity domain SUB_RS01495 PF01420 Type I restriction modification DNA specificity domain SUB_RS01500 PF18766 SWI2/SNF2 ATPase SUB_RS01500 PF12008 Type I restriction and modification enzyme - subunit R C terminal SUB_RS01500 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SUB_RS01505 PF00455 DeoR C terminal sensor domain SUB_RS01505 PF08220 DeoR-like helix-turn-helix domain SUB_RS01510 PF00834 Ribulose-phosphate 3 epimerase family SUB_RS01515 PF01380 SIS domain SUB_RS01520 PF01232 Mannitol dehydrogenase Rossmann domain SUB_RS01520 PF08125 Mannitol dehydrogenase C-terminal domain SUB_RS01530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS01530 PF02378 Phosphotransferase system, EIIC SUB_RS01535 PF00923 Transaldolase/Fructose-6-phosphate aldolase SUB_RS01540 PF02780 Transketolase, C-terminal domain SUB_RS01540 PF00456 Transketolase, thiamine diphosphate binding domain SUB_RS01540 PF02779 Transketolase, pyrimidine binding domain SUB_RS01555 PF00005 ABC transporter SUB_RS01555 PF08402 TOBE domain SUB_RS01585 PF00561 alpha/beta hydrolase fold SUB_RS01590 PF00356 Bacterial regulatory proteins, lacI family SUB_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS01605 PF01547 Bacterial extracellular solute-binding protein SUB_RS01610 PF00251 Glycosyl hydrolases family 32 N-terminal domain SUB_RS01610 PF08244 Glycosyl hydrolases family 32 C terminal SUB_RS01615 PF00480 ROK family SUB_RS01620 PF00232 Glycosyl hydrolase family 1 SUB_RS01625 PF07722 Peptidase C26 SUB_RS01635 PF00005 ABC transporter SUB_RS01635 PF12558 ATP-binding cassette cobalt transporter SUB_RS01640 PF07155 ECF-type riboflavin transporter, S component SUB_RS01685 PF13840 ACT domain SUB_RS01685 PF00696 Amino acid kinase family SUB_RS01690 PF01416 tRNA pseudouridine synthase SUB_RS01695 PF08543 Phosphomethylpyrimidine kinase SUB_RS01700 PF07155 ECF-type riboflavin transporter, S component SUB_RS01705 PF04260 Protein of unknown function (DUF436) SUB_RS01710 PF00924 Mechanosensitive ion channel SUB_RS01715 PF05698 Bacterial trigger factor protein (TF) C-terminus SUB_RS01715 PF05697 Bacterial trigger factor protein (TF) SUB_RS01715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SUB_RS01720 PF13419 Haloacid dehalogenase-like hydrolase SUB_RS01725 PF05066 HB1, ASXL, restriction endonuclease HTH domain SUB_RS01730 PF00117 Glutamine amidotransferase class-I SUB_RS01730 PF06418 CTP synthase N-terminus SUB_RS01750 PF01116 Fructose-bisphosphate aldolase class-II SUB_RS01755 PF00830 Ribosomal L28 family SUB_RS01760 PF03780 Asp23 family, cell envelope-related function SUB_RS01765 PF13684 Dihydroxyacetone kinase family SUB_RS01765 PF02734 DAK2 domain SUB_RS01775 PF00005 ABC transporter SUB_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS01790 PF02673 Bacitracin resistance protein BacA SUB_RS01795 PF05389 Negative regulator of genetic competence (MecA) SUB_RS01800 PF00953 Glycosyl transferase family 4 SUB_RS01810 PF00005 ABC transporter SUB_RS01815 PF01458 Uncharacterized protein family (UPF0051) SUB_RS01820 PF00266 Aminotransferase class-V SUB_RS01825 PF01592 NifU-like N terminal domain SUB_RS01830 PF01458 Uncharacterized protein family (UPF0051) SUB_RS01840 PF07943 Penicillin-binding protein 5, C-terminal domain SUB_RS01840 PF00768 D-alanyl-D-alanine carboxypeptidase SUB_RS01845 PF07943 Penicillin-binding protein 5, C-terminal domain SUB_RS01845 PF00768 D-alanyl-D-alanine carboxypeptidase SUB_RS01850 PF00768 D-alanyl-D-alanine carboxypeptidase SUB_RS01850 PF07943 Penicillin-binding protein 5, C-terminal domain SUB_RS01895 PF01926 50S ribosome-binding GTPase SUB_RS01900 PF01985 CRS1 / YhbY (CRM) domain SUB_RS01905 PF01467 Cytidylyltransferase-like SUB_RS01910 PF01966 HD domain SUB_RS01920 PF13649 Methyltransferase domain SUB_RS01925 PF05636 HIGH Nucleotidyl Transferase SUB_RS01935 PF08000 Bacterial PH domain SUB_RS01945 PF01709 Transcriptional regulator SUB_RS01950 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS01955 PF03180 NLPA lipoprotein SUB_RS01960 PF01546 Peptidase family M20/M25/M40 SUB_RS01960 PF07687 Peptidase dimerisation domain SUB_RS01965 PF00005 ABC transporter SUB_RS01965 PF09383 NIL domain SUB_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS01975 PF05525 Branched-chain amino acid transport protein SUB_RS01980 PF02080 TrkA-C domain SUB_RS01980 PF02254 TrkA-N domain SUB_RS01985 PF02386 Cation transport protein SUB_RS01990 PF02527 rRNA small subunit methyltransferase G SUB_RS01995 PF04011 LemA family SUB_RS02000 PF01435 Peptidase family M48 SUB_RS02010 PF00486 Transcriptional regulatory protein, C terminal SUB_RS02010 PF00072 Response regulator receiver domain SUB_RS02015 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS02015 PF18719 ArlS sensor domain SUB_RS02020 PF03477 ATP cone domain SUB_RS02030 PF01695 IstB-like ATP binding protein SUB_RS02030 PF07319 Primosomal protein DnaI N-terminus SUB_RS02035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SUB_RS02035 PF01926 50S ribosome-binding GTPase SUB_RS02040 PF12419 SNF2 Helicase protein SUB_RS02040 PF00271 Helicase conserved C-terminal domain SUB_RS02040 PF00176 SNF2 family N-terminal domain SUB_RS02060 PF01225 Mur ligase family, catalytic domain SUB_RS02060 PF08245 Mur ligase middle domain SUB_RS02060 PF02875 Mur ligase family, glutamate ligase domain SUB_RS02070 PF02618 YceG-like family SUB_RS02075 PF01272 Transcription elongation factor, GreA/GreB, C-term SUB_RS02075 PF03449 Transcription elongation factor, N-terminal SUB_RS02080 PF02096 60Kd inner membrane protein SUB_RS02085 PF00708 Acylphosphatase SUB_RS02090 PF08032 RNA 2'-O ribose methyltransferase substrate binding SUB_RS02090 PF00588 SpoU rRNA Methylase family SUB_RS02100 PF01027 Inhibitor of apoptosis-promoting Bax1 SUB_RS02105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SUB_RS02105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SUB_RS02110 PF03672 Uncharacterised protein family (UPF0154) SUB_RS02115 PF01177 Asp/Glu/Hydantoin racemase SUB_RS02120 PF01725 Ham1 family SUB_RS02125 PF12850 Calcineurin-like phosphoesterase superfamily domain SUB_RS02130 PF00571 CBS domain SUB_RS02130 PF00005 ABC transporter SUB_RS02135 PF00589 Phage integrase family SUB_RS02135 PF02899 Phage integrase, N-terminal SAM-like domain SUB_RS02140 PF02616 Segregation and condensation protein ScpA SUB_RS02145 PF04079 Segregation and condensation complex subunit ScpB SUB_RS02150 PF01479 S4 domain SUB_RS02150 PF00849 RNA pseudouridylate synthase SUB_RS02155 PF01809 Putative membrane protein insertion efficiency factor SUB_RS02160 PF00588 SpoU rRNA Methylase family SUB_RS02165 PF12822 ECF transporter, substrate-specific component SUB_RS02170 PF01569 PAP2 superfamily SUB_RS02175 PF16199 Radical_SAM C-terminal domain SUB_RS02175 PF04055 Radical SAM superfamily SUB_RS02180 PF13732 Domain of unknown function (DUF4162) SUB_RS02180 PF00005 ABC transporter SUB_RS02195 PF01595 Cyclin M transmembrane N-terminal domain SUB_RS02195 PF00571 CBS domain SUB_RS02195 PF03471 Transporter associated domain SUB_RS02200 PF04055 Radical SAM superfamily SUB_RS02205 PF02833 DHHA2 domain SUB_RS02205 PF01368 DHH family SUB_RS02220 PF01032 FecCD transport family SUB_RS02225 PF01032 FecCD transport family SUB_RS02230 PF01497 Periplasmic binding protein SUB_RS02235 PF00005 ABC transporter SUB_RS02240 PF08245 Mur ligase middle domain SUB_RS02240 PF02875 Mur ligase family, glutamate ligase domain SUB_RS02245 PF14667 Polysaccharide biosynthesis C-terminal domain SUB_RS02245 PF01943 Polysaccharide biosynthesis protein SUB_RS02250 PF00155 Aminotransferase class I and II SUB_RS02260 PF00574 Clp protease SUB_RS02270 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SUB_RS02275 PF13458 Periplasmic binding protein SUB_RS02280 PF02653 Branched-chain amino acid transport system / permease component SUB_RS02285 PF02653 Branched-chain amino acid transport system / permease component SUB_RS02285 PF11862 Domain of unknown function (DUF3382) SUB_RS02290 PF00005 ABC transporter SUB_RS02290 PF12399 Branched-chain amino acid ATP-binding cassette transporter SUB_RS02295 PF00005 ABC transporter SUB_RS02300 PF00571 CBS domain SUB_RS02305 PF02223 Thymidylate kinase SUB_RS02310 PF09115 DNA polymerase III, delta subunit, C terminal SUB_RS02315 PF04468 PSP1 C-terminal conserved region SUB_RS02320 PF06156 Initiation control protein YabA SUB_RS02325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SUB_RS02335 PF03932 CutC family SUB_RS02340 PF00266 Aminotransferase class-V SUB_RS02350 PF01842 ACT domain SUB_RS02350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SUB_RS02350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SUB_RS02355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SUB_RS02355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SUB_RS02360 PF03960 ArsC family SUB_RS02385 PF03372 Endonuclease/Exonuclease/phosphatase family SUB_RS02390 PF01022 Bacterial regulatory protein, arsR family SUB_RS02415 PF01588 Putative tRNA binding domain SUB_RS02415 PF09334 tRNA synthetases class I (M) SUB_RS02430 PF05525 Branched-chain amino acid transport protein SUB_RS02450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SUB_RS02450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUB_RS02455 PF12804 MobA-like NTP transferase domain SUB_RS02455 PF14602 Hexapeptide repeat of succinyl-transferase SUB_RS02455 PF00132 Bacterial transferase hexapeptide (six repeats) SUB_RS02460 PF00293 NUDIX domain SUB_RS02470 PF01048 Phosphorylase superfamily SUB_RS02480 PF01297 Zinc-uptake complex component A periplasmic SUB_RS02485 PF00005 ABC transporter SUB_RS02490 PF00950 ABC 3 transport family SUB_RS02495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUB_RS02505 PF01580 FtsK/SpoIIIE family SUB_RS02505 PF17854 FtsK alpha domain SUB_RS02505 PF09397 Ftsk gamma domain SUB_RS02515 PF00298 Ribosomal protein L11, RNA binding domain SUB_RS02515 PF03946 Ribosomal protein L11, N-terminal domain SUB_RS02520 PF00687 Ribosomal protein L1p/L10e family SUB_RS02525 PF00696 Amino acid kinase family SUB_RS02530 PF01765 Ribosome recycling factor SUB_RS02540 PF01625 Peptide methionine sulfoxide reductase SUB_RS02545 PF06855 YozE SAM-like fold SUB_RS02550 PF02562 PhoH-like protein SUB_RS02555 PF03167 Uracil DNA glycosylase superfamily SUB_RS02560 PF02130 Uncharacterized protein family UPF0054 SUB_RS02565 PF01219 Prokaryotic diacylglycerol kinase SUB_RS02570 PF07650 KH domain SUB_RS02570 PF01926 50S ribosome-binding GTPase SUB_RS02590 PF00005 ABC transporter SUB_RS02605 PF00664 ABC transporter transmembrane region SUB_RS02605 PF03412 Peptidase C39 family SUB_RS02605 PF00005 ABC transporter SUB_RS02670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SUB_RS02670 PF06827 Zinc finger found in FPG and IleRS SUB_RS02670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SUB_RS02675 PF01121 Dephospho-CoA kinase SUB_RS02685 PF05872 Bacterial protein of unknown function (DUF853) SUB_RS02690 PF00083 Sugar (and other) transporter SUB_RS02690 PF07690 Major Facilitator Superfamily SUB_RS02700 PF17876 Cold shock domain SUB_RS02700 PF00575 S1 RNA binding domain SUB_RS02700 PF00773 RNB domain SUB_RS02700 PF08206 Ribonuclease B OB domain SUB_RS02705 PF01668 SmpB protein SUB_RS02710 PF00535 Glycosyl transferase family 2 SUB_RS02715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS02720 PF00881 Nitroreductase family SUB_RS02730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS02735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS02735 PF00874 PRD domain SUB_RS02735 PF08279 HTH domain SUB_RS02735 PF05043 Mga helix-turn-helix domain SUB_RS02740 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SUB_RS02750 PF02378 Phosphotransferase system, EIIC SUB_RS02760 PF01321 Creatinase/Prolidase N-terminal domain SUB_RS02760 PF00557 Metallopeptidase family M24 SUB_RS02765 PF00356 Bacterial regulatory proteins, lacI family SUB_RS02770 PF00128 Alpha amylase, catalytic domain SUB_RS02770 PF09154 Domain of unknown function (DUF1939) SUB_RS02775 PF13439 Glycosyltransferase Family 4 SUB_RS02775 PF00534 Glycosyl transferases group 1 SUB_RS02780 PF13439 Glycosyltransferase Family 4 SUB_RS02780 PF00534 Glycosyl transferases group 1 SUB_RS02785 PF02824 TGS domain SUB_RS02785 PF03129 Anticodon binding domain SUB_RS02785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUB_RS02785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUB_RS02790 PF02733 Dak1 domain SUB_RS02800 PF02733 Dak1 domain SUB_RS02805 PF02734 DAK2 domain SUB_RS02810 PF03610 PTS system fructose IIA component SUB_RS02815 PF00230 Major intrinsic protein SUB_RS02825 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS02835 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS02840 PF00005 ABC transporter SUB_RS02845 PF00072 Response regulator receiver domain SUB_RS02845 PF00486 Transcriptional regulatory protein, C terminal SUB_RS02850 PF13426 PAS domain SUB_RS02850 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS02850 PF00672 HAMP domain SUB_RS02855 PF00753 Metallo-beta-lactamase superfamily SUB_RS02860 PF14622 Ribonuclease-III-like SUB_RS02860 PF00035 Double-stranded RNA binding motif SUB_RS02865 PF06470 SMC proteins Flexible Hinge Domain SUB_RS02865 PF02463 RecF/RecN/SMC N terminal domain SUB_RS02880 PF00448 SRP54-type protein, GTPase domain SUB_RS02880 PF02881 SRP54-type protein, helical bundle domain SUB_RS02890 PF13457 GW (Gly-Tryp) dipeptide domain SUB_RS02890 PF01510 N-acetylmuramoyl-L-alanine amidase SUB_RS02900 PF09323 Domain of unknown function (DUF1980) SUB_RS02905 PF03773 Predicted permease SUB_RS02915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS02920 PF00486 Transcriptional regulatory protein, C terminal SUB_RS02920 PF00072 Response regulator receiver domain SUB_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS02925 PF00989 PAS fold SUB_RS02925 PF16736 Single Cache-like SUB_RS02925 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS02930 PF12849 PBP superfamily domain SUB_RS02935 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS02940 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS02945 PF00005 ABC transporter SUB_RS02950 PF01895 PhoU domain SUB_RS02955 PF00575 S1 RNA binding domain SUB_RS02955 PF09371 Tex-like protein N-terminal domain SUB_RS02955 PF17674 HHH domain SUB_RS02955 PF16921 Tex protein YqgF-like domain SUB_RS02960 PF10263 SprT-like family SUB_RS02970 PF02603 HPr Serine kinase N terminus SUB_RS02970 PF07475 HPr Serine kinase C-terminal domain SUB_RS02975 PF01790 Prolipoprotein diacylglyceryl transferase SUB_RS02985 PF12732 YtxH-like protein SUB_RS03000 PF01136 Peptidase family U32 SUB_RS03000 PF16325 Peptidase family U32 C-terminal domain SUB_RS03010 PF02229 Transcriptional Coactivator p15 (PC4) SUB_RS03015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SUB_RS03040 PF01336 OB-fold nucleic acid binding domain SUB_RS03040 PF00152 tRNA synthetases class II (D, K and N) SUB_RS03050 PF00300 Histidine phosphatase superfamily (branch 1) SUB_RS03055 PF03733 Inner membrane component domain SUB_RS03060 PF04073 Aminoacyl-tRNA editing domain SUB_RS03065 PF09515 Thiamine transporter protein (Thia_YuaJ) SUB_RS03090 PF08439 Oligopeptidase F SUB_RS03090 PF01432 Peptidase family M3 SUB_RS03095 PF00311 Phosphoenolpyruvate carboxylase SUB_RS03100 PF01098 Cell cycle protein SUB_RS03105 PF03143 Elongation factor Tu C-terminal domain SUB_RS03105 PF03144 Elongation factor Tu domain 2 SUB_RS03105 PF00009 Elongation factor Tu GTP binding domain SUB_RS03110 PF00121 Triosephosphate isomerase SUB_RS03120 PF02388 FemAB family SUB_RS03130 PF01966 HD domain SUB_RS03150 PF00690 Cation transporter/ATPase, N-terminus SUB_RS03150 PF00689 Cation transporting ATPase, C-terminus SUB_RS03160 PF03009 Glycerophosphoryl diester phosphodiesterase family SUB_RS03170 PF13419 Haloacid dehalogenase-like hydrolase SUB_RS03175 PF06874 Firmicute fructose-1,6-bisphosphatase SUB_RS03180 PF08331 Domain of unknown function (DUF1730) SUB_RS03185 PF00472 RF-1 domain SUB_RS03185 PF03462 PCRF domain SUB_RS03190 PF00005 ABC transporter SUB_RS03195 PF02687 FtsX-like permease family SUB_RS03195 PF18075 FtsX extracellular domain SUB_RS03200 PF00753 Metallo-beta-lactamase superfamily SUB_RS03210 PF00929 Exonuclease SUB_RS03210 PF13307 Helicase C-terminal domain SUB_RS03215 PF00155 Aminotransferase class I and II SUB_RS03220 PF00152 tRNA synthetases class II (D, K and N) SUB_RS03220 PF01336 OB-fold nucleic acid binding domain SUB_RS03225 PF03668 P-loop ATPase protein family SUB_RS03230 PF01933 Uncharacterised protein family UPF0052 SUB_RS03235 PF14527 WhiA LAGLIDADG-like domain SUB_RS03235 PF02650 WhiA C-terminal HTH domain SUB_RS03235 PF10298 WhiA N-terminal LAGLIDADG-like domain SUB_RS03240 PF03577 Peptidase family C69 SUB_RS03245 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SUB_RS03245 PF01297 Zinc-uptake complex component A periplasmic SUB_RS03250 PF01197 Ribosomal protein L31 SUB_RS03255 PF02272 DHHA1 domain SUB_RS03255 PF01368 DHH family SUB_RS03260 PF13673 Acetyltransferase (GNAT) domain SUB_RS03270 PF00155 Aminotransferase class I and II SUB_RS03275 PF02798 Glutathione S-transferase, N-terminal domain SUB_RS03280 PF00258 Flavodoxin SUB_RS03285 PF01817 Chorismate mutase type II SUB_RS03285 PF02153 Prephenate dehydrogenase SUB_RS03290 PF00654 Voltage gated chloride channel SUB_RS03295 PF01245 Ribosomal protein L19 SUB_RS03310 PF01098 Cell cycle protein SUB_RS03320 PF01751 Toprim domain SUB_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS03320 PF00986 DNA gyrase B subunit, carboxyl terminus SUB_RS03320 PF00204 DNA gyrase B SUB_RS03325 PF06160 Septation ring formation regulator, EzrA SUB_RS03350 PF00113 Enolase, C-terminal TIM barrel domain SUB_RS03350 PF03952 Enolase, N-terminal domain SUB_RS03355 PF00313 'Cold-shock' DNA-binding domain SUB_RS03360 PF06177 QueT transporter SUB_RS03365 PF12826 Helix-hairpin-helix motif SUB_RS03365 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SUB_RS03365 PF00533 BRCA1 C Terminus (BRCT) domain SUB_RS03365 PF01653 NAD-dependent DNA ligase adenylation domain SUB_RS03365 PF03120 NAD-dependent DNA ligase OB-fold domain SUB_RS03370 PF00781 Diacylglycerol kinase catalytic domain SUB_RS03375 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SUB_RS03375 PF00128 Alpha amylase, catalytic domain SUB_RS03375 PF17999 Pullulanase N1-terminal domain SUB_RS03380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SUB_RS03380 PF00128 Alpha amylase, catalytic domain SUB_RS03380 PF02806 Alpha amylase, C-terminal all-beta domain SUB_RS03385 PF00483 Nucleotidyl transferase SUB_RS03385 PF00132 Bacterial transferase hexapeptide (six repeats) SUB_RS03390 PF00483 Nucleotidyl transferase SUB_RS03395 PF08323 Starch synthase catalytic domain SUB_RS03395 PF00534 Glycosyl transferases group 1 SUB_RS03400 PF00343 Carbohydrate phosphorylase SUB_RS03405 PF00137 ATP synthase subunit C SUB_RS03410 PF00119 ATP synthase A chain SUB_RS03415 PF00430 ATP synthase B/B' CF(0) SUB_RS03420 PF00213 ATP synthase delta (OSCP) subunit SUB_RS03425 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUB_RS03425 PF00306 ATP synthase alpha/beta chain, C terminal domain SUB_RS03425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUB_RS03430 PF00231 ATP synthase SUB_RS03435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SUB_RS03435 PF02874 ATP synthase alpha/beta family, beta-barrel domain SUB_RS03440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SUB_RS03440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SUB_RS03450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUB_RS03460 PF01223 DNA/RNA non-specific endonuclease SUB_RS03465 PF01409 tRNA synthetases class II core domain (F) SUB_RS03465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SUB_RS03470 PF13673 Acetyltransferase (GNAT) domain SUB_RS03475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SUB_RS03475 PF01588 Putative tRNA binding domain SUB_RS03475 PF03484 tRNA synthetase B5 domain SUB_RS03475 PF03147 Ferredoxin-fold anticodon binding domain SUB_RS03475 PF03483 B3/4 domain SUB_RS03485 PF02687 FtsX-like permease family SUB_RS03490 PF00005 ABC transporter SUB_RS03495 PF04228 Putative neutral zinc metallopeptidase SUB_RS03500 PF12705 PD-(D/E)XK nuclease superfamily SUB_RS03505 PF13361 UvrD-like helicase C-terminal domain SUB_RS03505 PF00580 UvrD/REP helicase N-terminal domain SUB_RS03505 PF12705 PD-(D/E)XK nuclease superfamily SUB_RS03510 PF00155 Aminotransferase class I and II SUB_RS03515 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS03520 PF01165 Ribosomal protein S21 SUB_RS03525 PF01741 Large-conductance mechanosensitive channel, MscL SUB_RS03530 PF01807 CHC2 zinc finger SUB_RS03530 PF08275 DNA primase catalytic core, N-terminal domain SUB_RS03530 PF10410 DnaB-helicase binding domain of primase SUB_RS03535 PF04545 Sigma-70, region 4 SUB_RS03535 PF03979 Sigma-70 factor, region 1.1 SUB_RS03535 PF04539 Sigma-70 region 3 SUB_RS03535 PF04542 Sigma-70 region 2 SUB_RS03535 PF00140 Sigma-70 factor, region 1.2 SUB_RS03540 PF01883 Iron-sulfur cluster assembly protein SUB_RS03545 PF04321 RmlD substrate binding domain SUB_RS03555 PF00535 Glycosyl transferase family 2 SUB_RS03565 PF00005 ABC transporter SUB_RS03590 PF00535 Glycosyl transferase family 2 SUB_RS03600 PF01520 N-acetylmuramoyl-L-alanine amidase SUB_RS03605 PF01546 Peptidase family M20/M25/M40 SUB_RS03605 PF07687 Peptidase dimerisation domain SUB_RS03620 PF02224 Cytidylate kinase SUB_RS03625 PF00707 Translation initiation factor IF-3, C-terminal domain SUB_RS03625 PF05198 Translation initiation factor IF-3, N-terminal domain SUB_RS03630 PF01632 Ribosomal protein L35 SUB_RS03635 PF00453 Ribosomal protein L20 SUB_RS03640 PF00884 Sulfatase SUB_RS03645 PF10672 S-adenosylmethionine-dependent methyltransferase SUB_RS03645 PF17785 PUA-like domain SUB_RS03650 PF01487 Type I 3-dehydroquinase SUB_RS03655 PF01264 Chorismate synthase SUB_RS03660 PF06133 Control of competence regulator ComK, YlbF/YmcA SUB_RS03665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS03665 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS03675 PF00266 Aminotransferase class-V SUB_RS03680 PF02568 Thiamine biosynthesis protein (ThiI) SUB_RS03680 PF02926 THUMP domain SUB_RS03685 PF09587 Bacterial capsule synthesis protein PGA_cap SUB_RS03690 PF01156 Inosine-uridine preferring nucleoside hydrolase SUB_RS03695 PF00829 Ribosomal prokaryotic L21 protein SUB_RS03705 PF01016 Ribosomal L27 protein SUB_RS03710 PF03466 LysR substrate binding domain SUB_RS03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUB_RS03715 PF01252 Signal peptidase (SPase) II SUB_RS03720 PF00849 RNA pseudouridylate synthase SUB_RS03720 PF01479 S4 domain SUB_RS03725 PF00156 Phosphoribosyl transferase domain SUB_RS03730 PF00860 Permease family SUB_RS03735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUB_RS03735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUB_RS03740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SUB_RS03740 PF00117 Glutamine amidotransferase class-I SUB_RS03745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUB_RS03745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SUB_RS03745 PF02142 MGS-like domain SUB_RS03755 PF00005 ABC transporter SUB_RS03760 PF12704 MacB-like periplasmic core domain SUB_RS03760 PF02687 FtsX-like permease family SUB_RS03770 PF03009 Glycerophosphoryl diester phosphodiesterase family SUB_RS03775 PF00886 Ribosomal protein S16 SUB_RS03785 PF05239 PRC-barrel domain SUB_RS03785 PF01782 RimM N-terminal domain SUB_RS03790 PF01746 tRNA (Guanine-1)-methyltransferase SUB_RS03795 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS03805 PF08546 Ketopantoate reductase PanE/ApbA C terminal SUB_RS03805 PF02558 Ketopantoate reductase PanE/ApbA SUB_RS03810 PF00455 DeoR C terminal sensor domain SUB_RS03810 PF08220 DeoR-like helix-turn-helix domain SUB_RS03815 PF00294 pfkB family carbohydrate kinase SUB_RS03820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS03820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS03825 PF05257 CHAP domain SUB_RS03825 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SUB_RS03830 PF01476 LysM domain SUB_RS03830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SUB_RS03845 PF02645 Uncharacterised protein, DegV family COG1307 SUB_RS03850 PF01113 Dihydrodipicolinate reductase, N-terminus SUB_RS03850 PF05173 Dihydrodipicolinate reductase, C-terminus SUB_RS03855 PF01743 Poly A polymerase head domain SUB_RS03855 PF12627 Probable RNA and SrmB- binding site of polymerase A SUB_RS03855 PF13735 tRNA nucleotidyltransferase domain 2 putative SUB_RS03860 PF16326 ABC transporter C-terminal domain SUB_RS03860 PF12848 ABC transporter SUB_RS03860 PF00005 ABC transporter SUB_RS03870 PF00664 ABC transporter transmembrane region SUB_RS03870 PF00005 ABC transporter SUB_RS03875 PF00005 ABC transporter SUB_RS03875 PF00664 ABC transporter transmembrane region SUB_RS03880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SUB_RS03880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SUB_RS03885 PF01327 Polypeptide deformylase SUB_RS03895 PF08544 GHMP kinases C terminal SUB_RS03895 PF00288 GHMP kinases N terminal domain SUB_RS03895 PF10509 Galactokinase galactose-binding signature SUB_RS03905 PF00288 GHMP kinases N terminal domain SUB_RS03905 PF08544 GHMP kinases C terminal SUB_RS03910 PF01070 FMN-dependent dehydrogenase SUB_RS03915 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SUB_RS03920 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SUB_RS03920 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SUB_RS03925 PF00303 Thymidylate synthase SUB_RS03930 PF00186 Dihydrofolate reductase SUB_RS03935 PF06689 ClpX C4-type zinc finger SUB_RS03935 PF10431 C-terminal, D2-small domain, of ClpB protein SUB_RS03935 PF07724 AAA domain (Cdc48 subfamily) SUB_RS03940 PF01926 50S ribosome-binding GTPase SUB_RS03950 PF07724 AAA domain (Cdc48 subfamily) SUB_RS03950 PF17871 AAA lid domain SUB_RS03950 PF00004 ATPase family associated with various cellular activities (AAA) SUB_RS03950 PF10431 C-terminal, D2-small domain, of ClpB protein SUB_RS03955 PF00466 Ribosomal protein L10 SUB_RS03960 PF16320 Ribosomal protein L7/L12 dimerisation domain SUB_RS03960 PF00542 Ribosomal protein L7/L12 C-terminal domain SUB_RS03995 PF01719 Plasmid replication protein SUB_RS04005 PF00589 Phage integrase family SUB_RS04005 PF13495 Phage integrase, N-terminal SAM-like domain SUB_RS04015 PF00145 C-5 cytosine-specific DNA methylase SUB_RS04020 PF00145 C-5 cytosine-specific DNA methylase SUB_RS04025 PF08220 DeoR-like helix-turn-helix domain SUB_RS04025 PF00455 DeoR C terminal sensor domain SUB_RS04030 PF02502 Ribose/Galactose Isomerase SUB_RS04035 PF02502 Ribose/Galactose Isomerase SUB_RS04040 PF00294 pfkB family carbohydrate kinase SUB_RS04045 PF01791 DeoC/LacD family aldolase SUB_RS04050 PF00874 PRD domain SUB_RS04050 PF03123 CAT RNA binding domain SUB_RS04055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SUB_RS04060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS04060 PF02378 Phosphotransferase system, EIIC SUB_RS04065 PF00232 Glycosyl hydrolase family 1 SUB_RS04075 PF01263 Aldose 1-epimerase SUB_RS04080 PF01381 Helix-turn-helix SUB_RS04090 PF00589 Phage integrase family SUB_RS04090 PF13495 Phage integrase, N-terminal SAM-like domain SUB_RS04095 PF11975 Family 4 glycosyl hydrolase C-terminal domain SUB_RS04095 PF02056 Family 4 glycosyl hydrolase SUB_RS04100 PF01418 Helix-turn-helix domain, rpiR family SUB_RS04100 PF01380 SIS domain SUB_RS04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS04105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS04110 PF01522 Polysaccharide deacetylase SUB_RS04115 PF00742 Homoserine dehydrogenase SUB_RS04115 PF03447 Homoserine dehydrogenase, NAD binding domain SUB_RS04120 PF08544 GHMP kinases C terminal SUB_RS04120 PF00288 GHMP kinases N terminal domain SUB_RS04125 PF08245 Mur ligase middle domain SUB_RS04125 PF02875 Mur ligase family, glutamate ligase domain SUB_RS04130 PF01227 GTP cyclohydrolase I SUB_RS04135 PF00809 Pterin binding enzyme SUB_RS04140 PF02152 Dihydroneopterin aldolase SUB_RS04145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SUB_RS04150 PF01565 FAD binding domain SUB_RS04150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SUB_RS04155 PF00005 ABC transporter SUB_RS04155 PF08402 TOBE domain SUB_RS04160 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04170 PF13416 Bacterial extracellular solute-binding protein SUB_RS04175 PF00072 Response regulator receiver domain SUB_RS04180 PF00989 PAS fold SUB_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS04180 PF17203 Single cache domain 3 SUB_RS04180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SUB_RS04185 PF03390 2-hydroxycarboxylate transporter family SUB_RS04190 PF03949 Malic enzyme, NAD binding domain SUB_RS04190 PF00390 Malic enzyme, N-terminal domain SUB_RS04195 PF06280 Fn3-like domain SUB_RS04195 PF02225 PA domain SUB_RS04195 PF00082 Subtilase family SUB_RS04195 PF00746 LPXTG cell wall anchor motif SUB_RS04200 PF00654 Voltage gated chloride channel SUB_RS04210 PF02378 Phosphotransferase system, EIIC SUB_RS04210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SUB_RS04210 PF00367 phosphotransferase system, EIIB SUB_RS04215 PF12833 Helix-turn-helix domain SUB_RS04220 PF00232 Glycosyl hydrolase family 1 SUB_RS04235 PF00232 Glycosyl hydrolase family 1 SUB_RS04240 PF00300 Histidine phosphatase superfamily (branch 1) SUB_RS04245 PF00300 Histidine phosphatase superfamily (branch 1) SUB_RS04255 PF00232 Glycosyl hydrolase family 1 SUB_RS04260 PF01594 AI-2E family transporter SUB_RS04265 PF04002 RadC-like JAB domain SUB_RS04270 PF07722 Peptidase C26 SUB_RS04275 PF02629 CoA binding domain SUB_RS04275 PF06971 Putative DNA-binding protein N-terminus SUB_RS04290 PF00266 Aminotransferase class-V SUB_RS04295 PF14572 Phosphoribosyl synthetase-associated domain SUB_RS04295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SUB_RS04305 PF04607 Region found in RelA / SpoT proteins SUB_RS04310 PF01513 ATP-NAD kinase SUB_RS04315 PF00849 RNA pseudouridylate synthase SUB_RS04320 PF01515 Phosphate acetyl/butaryl transferase SUB_RS04325 PF00106 short chain dehydrogenase SUB_RS04340 PF14765 Polyketide synthase dehydratase SUB_RS04340 PF08659 KR domain SUB_RS04340 PF08240 Alcohol dehydrogenase GroES-like domain SUB_RS04340 PF00550 Phosphopantetheine attachment site SUB_RS04340 PF00698 Acyl transferase domain SUB_RS04350 PF00005 ABC transporter SUB_RS04350 PF00571 CBS domain SUB_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04360 PF00232 Glycosyl hydrolase family 1 SUB_RS04365 PF00478 IMP dehydrogenase / GMP reductase domain SUB_RS04370 PF00156 Phosphoribosyl transferase domain SUB_RS04375 PF00860 Permease family SUB_RS04380 PF02424 ApbE family SUB_RS04385 PF01361 Tautomerase enzyme SUB_RS04390 PF00265 Thymidine kinase SUB_RS04395 PF00472 RF-1 domain SUB_RS04395 PF03462 PCRF domain SUB_RS04400 PF05175 Methyltransferase small domain SUB_RS04405 PF01300 Telomere recombination SUB_RS04410 PF00464 Serine hydroxymethyltransferase SUB_RS04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS04425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS04430 PF01872 RibD C-terminal domain SUB_RS04435 PF00056 lactate/malate dehydrogenase, NAD binding domain SUB_RS04435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SUB_RS04440 PF03989 DNA gyrase C-terminal domain, beta-propeller SUB_RS04440 PF00521 DNA gyrase/topoisomerase IV, subunit A SUB_RS04445 PF04203 Sortase domain SUB_RS04450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS04460 PF01297 Zinc-uptake complex component A periplasmic SUB_RS04470 PF04474 Protein of unknown function (DUF554) SUB_RS04485 PF00854 POT family SUB_RS04490 PF00999 Sodium/hydrogen exchanger family SUB_RS04495 PF00117 Glutamine amidotransferase class-I SUB_RS04495 PF02540 NAD synthase SUB_RS04495 PF00958 GMP synthase C terminal domain SUB_RS04505 PF00392 Bacterial regulatory proteins, gntR family SUB_RS04505 PF07702 UTRA domain SUB_RS04510 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SUB_RS04515 PF00448 SRP54-type protein, GTPase domain SUB_RS04515 PF02881 SRP54-type protein, helical bundle domain SUB_RS04515 PF02978 Signal peptide binding domain SUB_RS04530 PF00817 impB/mucB/samB family SUB_RS04530 PF11798 IMS family HHH motif SUB_RS04530 PF11799 impB/mucB/samB family C-terminal domain SUB_RS04540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUB_RS04540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SUB_RS04550 PF00248 Aldo/keto reductase family SUB_RS04555 PF01380 SIS domain SUB_RS04555 PF01418 Helix-turn-helix domain, rpiR family SUB_RS04560 PF00232 Glycosyl hydrolase family 1 SUB_RS04565 PF07883 Cupin domain SUB_RS04570 PF00890 FAD binding domain SUB_RS04570 PF04205 FMN-binding domain SUB_RS04570 PF03358 NADPH-dependent FMN reductase SUB_RS04575 PF04205 FMN-binding domain SUB_RS04575 PF03358 NADPH-dependent FMN reductase SUB_RS04575 PF00890 FAD binding domain SUB_RS04580 PF01546 Peptidase family M20/M25/M40 SUB_RS04580 PF07687 Peptidase dimerisation domain SUB_RS04600 PF00589 Phage integrase family SUB_RS04600 PF13495 Phage integrase, N-terminal SAM-like domain SUB_RS04605 PF00293 NUDIX domain SUB_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS04620 PF00072 Response regulator receiver domain SUB_RS04620 PF00486 Transcriptional regulatory protein, C terminal SUB_RS04630 PF00005 ABC transporter SUB_RS04640 PF01134 Glucose inhibited division protein A SUB_RS04655 PF03466 LysR substrate binding domain SUB_RS04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUB_RS04660 PF01131 DNA topoisomerase SUB_RS04660 PF01751 Toprim domain SUB_RS04660 PF01396 Topoisomerase DNA binding C4 zinc finger SUB_RS04665 PF18255 DNA processing protein A sterile alpha motif domain SUB_RS04665 PF02481 DNA recombination-mediator protein A SUB_RS04670 PF12464 Maltose acetyltransferase SUB_RS04670 PF14602 Hexapeptide repeat of succinyl-transferase SUB_RS04675 PF01351 Ribonuclease HII SUB_RS04680 PF01926 50S ribosome-binding GTPase SUB_RS04690 PF03006 Haemolysin-III related SUB_RS04695 PF00781 Diacylglycerol kinase catalytic domain SUB_RS04705 PF00005 ABC transporter SUB_RS04705 PF12848 ABC transporter SUB_RS04710 PF00392 Bacterial regulatory proteins, gntR family SUB_RS04710 PF00155 Aminotransferase class I and II SUB_RS04715 PF03477 ATP cone domain SUB_RS04715 PF13597 Anaerobic ribonucleoside-triphosphate reductase SUB_RS04720 PF00701 Dihydrodipicolinate synthetase family SUB_RS04725 PF02774 Semialdehyde dehydrogenase, dimerisation domain SUB_RS04725 PF01118 Semialdehyde dehydrogenase, NAD binding domain SUB_RS04730 PF13091 PLD-like domain SUB_RS04740 PF01268 Formate--tetrahydrofolate ligase SUB_RS04750 PF02441 Flavoprotein SUB_RS04755 PF12822 ECF transporter, substrate-specific component SUB_RS04760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUB_RS04760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUB_RS04760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUB_RS04760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUB_RS04765 PF02653 Branched-chain amino acid transport system / permease component SUB_RS04770 PF02653 Branched-chain amino acid transport system / permease component SUB_RS04775 PF00005 ABC transporter SUB_RS04780 PF02608 ABC transporter substrate-binding protein PnrA-like SUB_RS04785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SUB_RS04790 PF01791 DeoC/LacD family aldolase SUB_RS04795 PF02885 Glycosyl transferase family, helical bundle domain SUB_RS04795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SUB_RS04795 PF00591 Glycosyl transferase family, a/b domain SUB_RS04800 PF05175 Methyltransferase small domain SUB_RS04805 PF00485 Phosphoribulokinase / Uridine kinase family SUB_RS04810 PF01649 Ribosomal protein S20 SUB_RS04815 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS04820 PF00486 Transcriptional regulatory protein, C terminal SUB_RS04820 PF00072 Response regulator receiver domain SUB_RS04825 PF11838 ERAP1-like C-terminal domain SUB_RS04825 PF01433 Peptidase family M1 domain SUB_RS04830 PF01895 PhoU domain SUB_RS04835 PF00005 ABC transporter SUB_RS04840 PF00005 ABC transporter SUB_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04855 PF12849 PBP superfamily domain SUB_RS04860 PF00459 Inositol monophosphatase family SUB_RS04865 PF05256 Uncharacterised protein family (UPF0223) SUB_RS04870 PF03960 ArsC family SUB_RS04875 PF01687 Riboflavin kinase SUB_RS04875 PF06574 FAD synthetase SUB_RS04880 PF01509 TruB family pseudouridylate synthase (N terminal domain) SUB_RS04880 PF16198 tRNA pseudouridylate synthase B C-terminal domain SUB_RS04905 PF02687 FtsX-like permease family SUB_RS04905 PF12704 MacB-like periplasmic core domain SUB_RS04905 PF00005 ABC transporter SUB_RS04915 PF08534 Redoxin SUB_RS04925 PF03780 Asp23 family, cell envelope-related function SUB_RS04935 PF03780 Asp23 family, cell envelope-related function SUB_RS04950 PF04226 Transglycosylase associated protein SUB_RS04955 PF04226 Transglycosylase associated protein SUB_RS04960 PF13361 UvrD-like helicase C-terminal domain SUB_RS04960 PF00580 UvrD/REP helicase N-terminal domain SUB_RS04965 PF01235 Sodium:alanine symporter family SUB_RS04970 PF16916 Dimerisation domain of Zinc Transporter SUB_RS04970 PF01545 Cation efflux family SUB_RS04975 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS04980 PF00005 ABC transporter SUB_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS04990 PF03831 PhnA domain SUB_RS04990 PF08274 PhnA Zinc-Ribbon SUB_RS04995 PF01232 Mannitol dehydrogenase Rossmann domain SUB_RS04995 PF08125 Mannitol dehydrogenase C-terminal domain SUB_RS05000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS05005 PF08279 HTH domain SUB_RS05005 PF05043 Mga helix-turn-helix domain SUB_RS05005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS05010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS05010 PF02378 Phosphotransferase system, EIIC SUB_RS05015 PF01380 SIS domain SUB_RS05020 PF10502 Signal peptidase, peptidase S26 SUB_RS05025 PF02887 Pyruvate kinase, alpha/beta domain SUB_RS05025 PF00224 Pyruvate kinase, barrel domain SUB_RS05030 PF00365 Phosphofructokinase SUB_RS05035 PF02811 PHP domain SUB_RS05035 PF14579 Helix-hairpin-helix motif SUB_RS05035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SUB_RS05035 PF07733 Bacterial DNA polymerase III alpha NTPase domain SUB_RS05035 PF01336 OB-fold nucleic acid binding domain SUB_RS05040 PF00392 Bacterial regulatory proteins, gntR family SUB_RS05045 PF00005 ABC transporter SUB_RS05070 PF00575 S1 RNA binding domain SUB_RS05090 PF01063 Amino-transferase class IV SUB_RS05095 PF00521 DNA gyrase/topoisomerase IV, subunit A SUB_RS05095 PF03989 DNA gyrase C-terminal domain, beta-propeller SUB_RS05105 PF00204 DNA gyrase B SUB_RS05105 PF00986 DNA gyrase B subunit, carboxyl terminus SUB_RS05105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS05105 PF01751 Toprim domain SUB_RS05110 PF02660 Glycerol-3-phosphate acyltransferase SUB_RS05115 PF01979 Amidohydrolase family SUB_RS05120 PF03167 Uracil DNA glycosylase superfamily SUB_RS05125 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS05130 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS05135 PF01425 Amidase SUB_RS05140 PF01161 Phosphatidylethanolamine-binding protein SUB_RS05155 PF00156 Phosphoribosyl transferase domain SUB_RS05160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SUB_RS05170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SUB_RS05170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SUB_RS05170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SUB_RS05175 PF01370 NAD dependent epimerase/dehydratase family SUB_RS05180 PF02350 UDP-N-acetylglucosamine 2-epimerase SUB_RS05215 PF00534 Glycosyl transferases group 1 SUB_RS05215 PF13439 Glycosyltransferase Family 4 SUB_RS05220 PF16363 GDP-mannose 4,6 dehydratase SUB_RS05225 PF02397 Bacterial sugar transferase SUB_RS05230 PF02719 Polysaccharide biosynthesis protein SUB_RS05235 PF13614 AAA domain SUB_RS05240 PF02706 Chain length determinant protein SUB_RS05250 PF03816 Cell envelope-related transcriptional attenuator domain SUB_RS05255 PF03466 LysR substrate binding domain SUB_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUB_RS05265 PF01048 Phosphorylase superfamily SUB_RS05270 PF01048 Phosphorylase superfamily SUB_RS05275 PF03960 ArsC family SUB_RS05280 PF01676 Metalloenzyme superfamily SUB_RS05285 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SUB_RS05290 PF10396 GTP-binding protein TrmE N-terminus SUB_RS05290 PF12631 MnmE helical domain SUB_RS05290 PF01926 50S ribosome-binding GTPase SUB_RS05310 PF01546 Peptidase family M20/M25/M40 SUB_RS05315 PF00881 Nitroreductase family SUB_RS05320 PF08459 UvrC Helix-hairpin-helix N-terminal SUB_RS05320 PF02151 UvrB/uvrC motif SUB_RS05320 PF01541 GIY-YIG catalytic domain SUB_RS05330 PF00171 Aldehyde dehydrogenase family SUB_RS05350 PF13419 Haloacid dehalogenase-like hydrolase SUB_RS05365 PF00248 Aldo/keto reductase family SUB_RS05385 PF03601 Conserved hypothetical protein 698 SUB_RS05390 PF00248 Aldo/keto reductase family SUB_RS05395 PF02627 Carboxymuconolactone decarboxylase family SUB_RS05405 PF13411 MerR HTH family regulatory protein SUB_RS05410 PF08240 Alcohol dehydrogenase GroES-like domain SUB_RS05410 PF00107 Zinc-binding dehydrogenase SUB_RS05420 PF00248 Aldo/keto reductase family SUB_RS05430 PF01966 HD domain SUB_RS05435 PF01641 SelR domain SUB_RS05440 PF00679 Elongation factor G C-terminus SUB_RS05440 PF06421 GTP-binding protein LepA C-terminus SUB_RS05440 PF03144 Elongation factor Tu domain 2 SUB_RS05440 PF00009 Elongation factor Tu GTP binding domain SUB_RS05450 PF00334 Nucleoside diphosphate kinase SUB_RS05460 PF13344 Haloacid dehalogenase-like hydrolase SUB_RS05470 PF04055 Radical SAM superfamily SUB_RS05470 PF06969 HemN C-terminal domain SUB_RS05480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SUB_RS05480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SUB_RS05480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SUB_RS05480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SUB_RS05490 PF02457 DisA bacterial checkpoint controller nucleotide-binding SUB_RS05495 PF08353 Domain of unknown function (DUF1727) SUB_RS05495 PF08245 Mur ligase middle domain SUB_RS05500 PF07685 CobB/CobQ-like glutamine amidotransferase domain SUB_RS05505 PF17573 GA-like domain SUB_RS05505 PF00746 LPXTG cell wall anchor motif SUB_RS05505 PF01378 B domain SUB_RS05510 PF12833 Helix-turn-helix domain SUB_RS05515 PF03099 Biotin/lipoate A/B protein ligase family SUB_RS05515 PF10437 Bacterial lipoate protein ligase C-terminus SUB_RS05525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS05525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS05530 PF00364 Biotin-requiring enzyme SUB_RS05530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SUB_RS05530 PF02817 e3 binding domain SUB_RS05535 PF02779 Transketolase, pyrimidine binding domain SUB_RS05535 PF00364 Biotin-requiring enzyme SUB_RS05535 PF02780 Transketolase, C-terminal domain SUB_RS05540 PF00676 Dehydrogenase E1 component SUB_RS05545 PF16326 ABC transporter C-terminal domain SUB_RS05545 PF12848 ABC transporter SUB_RS05545 PF00005 ABC transporter SUB_RS05555 PF00756 Putative esterase SUB_RS05560 PF00753 Metallo-beta-lactamase superfamily SUB_RS05560 PF17770 Ribonuclease J C-terminal domain SUB_RS05560 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SUB_RS05565 PF08402 TOBE domain SUB_RS05565 PF00005 ABC transporter SUB_RS05580 PF05670 NFACT protein RNA binding domain SUB_RS05585 PF03306 Alpha-acetolactate decarboxylase SUB_RS05590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SUB_RS05590 PF00205 Thiamine pyrophosphate enzyme, central domain SUB_RS05590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SUB_RS05600 PF01594 AI-2E family transporter SUB_RS05605 PF00293 NUDIX domain SUB_RS05610 PF10282 Lactonase, 7-bladed beta-propeller SUB_RS05625 PF16363 GDP-mannose 4,6 dehydratase SUB_RS05630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SUB_RS05635 PF00483 Nucleotidyl transferase SUB_RS05640 PF01266 FAD dependent oxidoreductase SUB_RS05645 PF02535 ZIP Zinc transporter SUB_RS05650 PF01784 NIF3 (NGG1p interacting factor 3) SUB_RS05660 PF10576 Iron-sulfur binding domain of endonuclease III SUB_RS05660 PF00633 Helix-hairpin-helix motif SUB_RS05660 PF00730 HhH-GPD superfamily base excision DNA repair protein SUB_RS05670 PF00156 Phosphoribosyl transferase domain SUB_RS05675 PF17768 RecJ OB domain SUB_RS05675 PF02272 DHHA1 domain SUB_RS05675 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SUB_RS05675 PF01368 DHH family SUB_RS05680 PF00106 short chain dehydrogenase SUB_RS05685 PF00753 Metallo-beta-lactamase superfamily SUB_RS05695 PF13167 GTP-binding GTPase N-terminal SUB_RS05695 PF01926 50S ribosome-binding GTPase SUB_RS05695 PF16360 GTP-binding GTPase Middle Region SUB_RS05715 PF17773 UPF0176 acylphosphatase like domain SUB_RS05715 PF12368 Rhodanase C-terminal SUB_RS05715 PF00581 Rhodanese-like domain SUB_RS05725 PF00343 Carbohydrate phosphorylase SUB_RS05730 PF02446 4-alpha-glucanotransferase SUB_RS05735 PF00356 Bacterial regulatory proteins, lacI family SUB_RS05745 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS05750 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS05755 PF04914 DltD protein SUB_RS05760 PF00550 Phosphopantetheine attachment site SUB_RS05765 PF03062 MBOAT, membrane-bound O-acyltransferase family SUB_RS05770 PF00501 AMP-binding enzyme SUB_RS05770 PF13193 AMP-binding enzyme C-terminal domain SUB_RS05780 PF17757 UvrB interaction domain SUB_RS05780 PF12344 Ultra-violet resistance protein B SUB_RS05780 PF02151 UvrB/uvrC motif SUB_RS05780 PF00271 Helicase conserved C-terminal domain SUB_RS05780 PF04851 Type III restriction enzyme, res subunit SUB_RS05785 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS05790 PF00005 ABC transporter SUB_RS05795 PF02225 PA domain SUB_RS05795 PF06280 Fn3-like domain SUB_RS05795 PF00082 Subtilase family SUB_RS05810 PF01018 GTP1/OBG SUB_RS05810 PF01926 50S ribosome-binding GTPase SUB_RS05810 PF09269 Domain of unknown function (DUF1967) SUB_RS05815 PF02073 Thermophilic metalloprotease (M29) SUB_RS05825 PF01479 S4 domain SUB_RS05825 PF00849 RNA pseudouridylate synthase SUB_RS05840 PF07690 Major Facilitator Superfamily SUB_RS05845 PF08903 Domain of unknown function (DUF1846) SUB_RS05850 PF03649 Uncharacterised protein family (UPF0014) SUB_RS05855 PF00005 ABC transporter SUB_RS05875 PF03412 Peptidase C39 family SUB_RS05875 PF00005 ABC transporter SUB_RS05875 PF00664 ABC transporter transmembrane region SUB_RS05890 PF13732 Domain of unknown function (DUF4162) SUB_RS05890 PF00005 ABC transporter SUB_RS05895 PF13344 Haloacid dehalogenase-like hydrolase SUB_RS05895 PF00293 NUDIX domain SUB_RS05910 PF00403 Heavy-metal-associated domain SUB_RS05915 PF00403 Heavy-metal-associated domain SUB_RS05920 PF01814 Hemerythrin HHE cation binding domain SUB_RS05920 PF04405 Domain of Unknown function (DUF542) SUB_RS05925 PF00027 Cyclic nucleotide-binding domain SUB_RS05925 PF13545 Crp-like helix-turn-helix domain SUB_RS05945 PF01555 DNA methylase SUB_RS05955 PF01938 TRAM domain SUB_RS05955 PF05958 tRNA (Uracil-5-)-methyltransferase SUB_RS05960 PF03816 Cell envelope-related transcriptional attenuator domain SUB_RS05965 PF01202 Shikimate kinase SUB_RS05970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUB_RS05980 PF00557 Metallopeptidase family M24 SUB_RS05985 PF00392 Bacterial regulatory proteins, gntR family SUB_RS05985 PF07085 DRTGG domain SUB_RS05985 PF03061 Thioesterase superfamily SUB_RS05985 PF00571 CBS domain SUB_RS05995 PF00933 Glycosyl hydrolase family 3 N terminal domain SUB_RS06000 PF00933 Glycosyl hydrolase family 3 N terminal domain SUB_RS06015 PF00106 short chain dehydrogenase SUB_RS06020 PF03786 D-mannonate dehydratase (UxuA) SUB_RS06025 PF02614 Glucuronate isomerase SUB_RS06030 PF01081 KDPG and KHG aldolase SUB_RS06035 PF00392 Bacterial regulatory proteins, gntR family SUB_RS06035 PF07729 FCD domain SUB_RS06040 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SUB_RS06040 PF02837 Glycosyl hydrolases family 2, sugar binding domain SUB_RS06040 PF00703 Glycosyl hydrolases family 2 SUB_RS06045 PF00294 pfkB family carbohydrate kinase SUB_RS06055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SUB_RS06060 PF02772 S-adenosylmethionine synthetase, central domain SUB_RS06060 PF02773 S-adenosylmethionine synthetase, C-terminal domain SUB_RS06060 PF00438 S-adenosylmethionine synthetase, N-terminal domain SUB_RS06070 PF08279 HTH domain SUB_RS06070 PF02237 Biotin protein ligase C terminal domain SUB_RS06070 PF03099 Biotin/lipoate A/B protein ligase family SUB_RS06080 PF12169 DNA polymerase III subunits gamma and tau domain III SUB_RS06085 PF13185 GAF domain SUB_RS06095 PF00485 Phosphoribulokinase / Uridine kinase family SUB_RS06100 PF00271 Helicase conserved C-terminal domain SUB_RS06100 PF00270 DEAD/DEAH box helicase SUB_RS06105 PF01522 Polysaccharide deacetylase SUB_RS06105 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SUB_RS06110 PF00171 Aldehyde dehydrogenase family SUB_RS06115 PF02896 PEP-utilising enzyme, TIM barrel domain SUB_RS06115 PF05524 PEP-utilising enzyme, N-terminal SUB_RS06115 PF00391 PEP-utilising enzyme, mobile domain SUB_RS06120 PF00381 PTS HPr component phosphorylation site SUB_RS06125 PF00462 Glutaredoxin SUB_RS06130 PF02867 Ribonucleotide reductase, barrel domain SUB_RS06130 PF00317 Ribonucleotide reductase, all-alpha domain SUB_RS06130 PF08343 Ribonucleotide reductase N-terminal SUB_RS06135 PF00268 Ribonucleotide reductase, small chain SUB_RS06150 PF02272 DHHA1 domain SUB_RS06150 PF01411 tRNA synthetases class II (A) SUB_RS06150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SUB_RS06155 PF13145 PPIC-type PPIASE domain SUB_RS06160 PF01596 O-methyltransferase SUB_RS06165 PF07690 Major Facilitator Superfamily SUB_RS06170 PF13419 Haloacid dehalogenase-like hydrolase SUB_RS06175 PF01432 Peptidase family M3 SUB_RS06175 PF08439 Oligopeptidase F SUB_RS06190 PF00849 RNA pseudouridylate synthase SUB_RS06190 PF01479 S4 domain SUB_RS06195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SUB_RS06200 PF02547 Queuosine biosynthesis protein SUB_RS06210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SUB_RS06210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SUB_RS06220 PF13567 Domain of unknown function (DUF4131) SUB_RS06220 PF03772 Competence protein SUB_RS06220 PF00753 Metallo-beta-lactamase superfamily SUB_RS06225 PF08459 UvrC Helix-hairpin-helix N-terminal SUB_RS06225 PF02151 UvrB/uvrC motif SUB_RS06225 PF01541 GIY-YIG catalytic domain SUB_RS06225 PF12826 Helix-hairpin-helix motif SUB_RS06230 PF01553 Acyltransferase SUB_RS06235 PF05175 Methyltransferase small domain SUB_RS06240 PF01541 GIY-YIG catalytic domain SUB_RS06245 PF02705 K+ potassium transporter SUB_RS06250 PF00270 DEAD/DEAH box helicase SUB_RS06250 PF00271 Helicase conserved C-terminal domain SUB_RS06265 PF03144 Elongation factor Tu domain 2 SUB_RS06265 PF00009 Elongation factor Tu GTP binding domain SUB_RS06265 PF16658 Class II release factor RF3, C-terminal domain SUB_RS06275 PF08245 Mur ligase middle domain SUB_RS06275 PF02875 Mur ligase family, glutamate ligase domain SUB_RS06275 PF01225 Mur ligase family, catalytic domain SUB_RS06280 PF07155 ECF-type riboflavin transporter, S component SUB_RS06285 PF01820 D-ala D-ala ligase N-terminus SUB_RS06285 PF07478 D-ala D-ala ligase C-terminus SUB_RS06290 PF13662 Toprim domain SUB_RS06290 PF02132 RecR protein SUB_RS06295 PF03717 Penicillin-binding Protein dimerisation domain SUB_RS06295 PF00905 Penicillin binding protein transpeptidase domain SUB_RS06300 PF01226 Formate/nitrite transporter SUB_RS06310 PF02829 3H domain SUB_RS06310 PF08279 HTH domain SUB_RS06315 PF00300 Histidine phosphatase superfamily (branch 1) SUB_RS06320 PF01180 Dihydroorotate dehydrogenase SUB_RS06335 PF00216 Bacterial DNA-binding protein SUB_RS06345 PF13472 GDSL-like Lipase/Acylhydrolase family SUB_RS06350 PF02645 Uncharacterised protein, DegV family COG1307 SUB_RS06355 PF13476 AAA domain SUB_RS06360 PF01316 Arginine repressor, DNA binding domain SUB_RS06360 PF02863 Arginine repressor, C-terminal domain SUB_RS06365 PF01479 S4 domain SUB_RS06365 PF01728 FtsJ-like methyltransferase SUB_RS06370 PF00348 Polyprenyl synthetase SUB_RS06375 PF02609 Exonuclease VII small subunit SUB_RS06380 PF13742 OB-fold nucleic acid binding domain SUB_RS06380 PF02601 Exonuclease VII, large subunit SUB_RS06385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SUB_RS06385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SUB_RS06390 PF00005 ABC transporter SUB_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS06405 PF17871 AAA lid domain SUB_RS06405 PF10431 C-terminal, D2-small domain, of ClpB protein SUB_RS06405 PF07724 AAA domain (Cdc48 subfamily) SUB_RS06405 PF00004 ATPase family associated with various cellular activities (AAA) SUB_RS06410 PF00293 NUDIX domain SUB_RS06420 PF00133 tRNA synthetases class I (I, L, M and V) SUB_RS06420 PF08264 Anticodon-binding domain of tRNA SUB_RS06425 PF05103 DivIVA protein SUB_RS06440 PF04472 Cell division protein SepF SUB_RS06445 PF01168 Alanine racemase, N-terminal domain SUB_RS06450 PF12327 FtsZ family, C-terminal domain SUB_RS06450 PF00091 Tubulin/FtsZ family, GTPase domain SUB_RS06455 PF11983 Membrane-attachment and polymerisation-promoting switch SUB_RS06455 PF02491 SHS2 domain inserted in FTSA SUB_RS06460 PF08478 POTRA domain, FtsQ-type SUB_RS06465 PF04101 Glycosyltransferase family 28 C-terminal domain SUB_RS06465 PF03033 Glycosyltransferase family 28 N-terminal domain SUB_RS06470 PF02875 Mur ligase family, glutamate ligase domain SUB_RS06470 PF08245 Mur ligase middle domain SUB_RS06480 PF00679 Elongation factor G C-terminus SUB_RS06480 PF03144 Elongation factor Tu domain 2 SUB_RS06480 PF00009 Elongation factor Tu GTP binding domain SUB_RS06480 PF14492 Elongation Factor G, domain II SUB_RS06490 PF00480 ROK family SUB_RS06505 PF00664 ABC transporter transmembrane region SUB_RS06505 PF00005 ABC transporter SUB_RS06510 PF00005 ABC transporter SUB_RS06510 PF00664 ABC transporter transmembrane region SUB_RS06520 PF04055 Radical SAM superfamily SUB_RS06525 PF06265 Protein of unknown function (DUF1027) SUB_RS06530 PF02872 5'-nucleotidase, C-terminal domain SUB_RS06535 PF13407 Periplasmic binding protein domain SUB_RS06540 PF02653 Branched-chain amino acid transport system / permease component SUB_RS06545 PF00005 ABC transporter SUB_RS06550 PF05025 RbsD / FucU transport protein family SUB_RS06555 PF00294 pfkB family carbohydrate kinase SUB_RS06560 PF00356 Bacterial regulatory proteins, lacI family SUB_RS06565 PF05362 Lon protease (S16) C-terminal proteolytic domain SUB_RS06565 PF13180 PDZ domain SUB_RS06570 PF01467 Cytidylyltransferase-like SUB_RS06580 PF00795 Carbon-nitrogen hydrolase SUB_RS06585 PF04371 Porphyromonas-type peptidyl-arginine deiminase SUB_RS06590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SUB_RS06595 PF03435 Saccharopine dehydrogenase NADP binding domain SUB_RS06595 PF16653 Saccharopine dehydrogenase C-terminal domain SUB_RS06600 PF17284 Spermidine synthase tetramerisation domain SUB_RS06605 PF01276 Orn/Lys/Arg decarboxylase, major domain SUB_RS06605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SUB_RS06610 PF03590 Aspartate-ammonia ligase SUB_RS06615 PF00696 Amino acid kinase family SUB_RS06620 PF01546 Peptidase family M20/M25/M40 SUB_RS06625 PF03606 C4-dicarboxylate anaerobic carrier SUB_RS06630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SUB_RS06630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SUB_RS06645 PF01316 Arginine repressor, DNA binding domain SUB_RS06645 PF02863 Arginine repressor, C-terminal domain SUB_RS06655 PF04237 YjbR SUB_RS06665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUB_RS06670 PF00293 NUDIX domain SUB_RS06690 PF08264 Anticodon-binding domain of tRNA SUB_RS06690 PF00133 tRNA synthetases class I (I, L, M and V) SUB_RS06690 PF10458 Valyl tRNA synthetase tRNA binding arm SUB_RS06705 PF12464 Maltose acetyltransferase SUB_RS06705 PF14602 Hexapeptide repeat of succinyl-transferase SUB_RS06745 PF01425 Amidase SUB_RS06760 PF13732 Domain of unknown function (DUF4162) SUB_RS06760 PF00005 ABC transporter SUB_RS06770 PF09335 SNARE associated Golgi protein SUB_RS06780 PF04205 FMN-binding domain SUB_RS06780 PF00890 FAD binding domain SUB_RS06780 PF03358 NADPH-dependent FMN reductase SUB_RS06785 PF01487 Type I 3-dehydroquinase SUB_RS06790 PF08501 Shikimate dehydrogenase substrate binding domain SUB_RS06790 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SUB_RS06795 PF07690 Major Facilitator Superfamily SUB_RS06800 PF07690 Major Facilitator Superfamily SUB_RS06815 PF03466 LysR substrate binding domain SUB_RS06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUB_RS06825 PF00583 Acetyltransferase (GNAT) family SUB_RS06835 PF05958 tRNA (Uracil-5-)-methyltransferase SUB_RS06835 PF01938 TRAM domain SUB_RS06840 PF02631 RecX family SUB_RS06845 PF04167 Protein of unknown function (DUF402) SUB_RS06910 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SUB_RS06910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SUB_RS06920 PF04851 Type III restriction enzyme, res subunit SUB_RS06920 PF00271 Helicase conserved C-terminal domain SUB_RS06925 PF09186 Domain of unknown function (DUF1949) SUB_RS06925 PF01205 Uncharacterized protein family UPF0029 SUB_RS06930 PF00291 Pyridoxal-phosphate dependent enzyme SUB_RS06935 PF00575 S1 RNA binding domain SUB_RS06940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SUB_RS06945 PF00072 Response regulator receiver domain SUB_RS06945 PF00196 Bacterial regulatory proteins, luxR family SUB_RS06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS06950 PF07730 Histidine kinase SUB_RS06960 PF00069 Protein kinase domain SUB_RS06960 PF03793 PASTA domain SUB_RS06970 PF01189 16S rRNA methyltransferase RsmB/F SUB_RS06970 PF01029 NusB family SUB_RS06975 PF00551 Formyl transferase SUB_RS06975 PF02911 Formyl transferase, C-terminal domain SUB_RS06980 PF04851 Type III restriction enzyme, res subunit SUB_RS06980 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SUB_RS06980 PF18074 Primosomal protein N C-terminal domain SUB_RS06980 PF17764 3′ DNA-binding domain (3′BD) SUB_RS06980 PF00271 Helicase conserved C-terminal domain SUB_RS06985 PF01192 RNA polymerase Rpb6 SUB_RS06990 PF00625 Guanylate kinase SUB_RS06995 PF12072 Domain of unknown function (DUF3552) SUB_RS06995 PF01966 HD domain SUB_RS06995 PF00013 KH domain SUB_RS07000 PF03466 LysR substrate binding domain SUB_RS07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SUB_RS07005 PF02803 Thiolase, C-terminal domain SUB_RS07005 PF00108 Thiolase, N-terminal domain SUB_RS07010 PF01144 Coenzyme A transferase SUB_RS07015 PF01144 Coenzyme A transferase SUB_RS07030 PF02664 S-Ribosylhomocysteinase (LuxS) SUB_RS07045 PF18708 MapZ extracellular C-terminal domain 2 SUB_RS07045 PF18041 MapZ extracellular domain 1 SUB_RS07050 PF01170 Putative RNA methylase family UPF0020 SUB_RS07050 PF02926 THUMP domain SUB_RS07055 PF05103 DivIVA protein SUB_RS07060 PF06908 YspA SLOG family SUB_RS07065 PF03838 Recombination protein U SUB_RS07070 PF00905 Penicillin binding protein transpeptidase domain SUB_RS07070 PF00912 Transglycosylase SUB_RS07075 PF03051 Peptidase C1-like family SUB_RS07080 PF02540 NAD synthase SUB_RS07085 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SUB_RS07085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SUB_RS07085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SUB_RS07090 PF00324 Amino acid permease SUB_RS07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS07105 PF00005 ABC transporter SUB_RS07110 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS07115 PF00497 Bacterial extracellular solute-binding proteins, family 3 SUB_RS07120 PF00270 DEAD/DEAH box helicase SUB_RS07120 PF00271 Helicase conserved C-terminal domain SUB_RS07125 PF00953 Glycosyl transferase family 4 SUB_RS07125 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SUB_RS07130 PF00905 Penicillin binding protein transpeptidase domain SUB_RS07130 PF03717 Penicillin-binding Protein dimerisation domain SUB_RS07130 PF03793 PASTA domain SUB_RS07140 PF01795 MraW methylase family SUB_RS07145 PF00171 Aldehyde dehydrogenase family SUB_RS07150 PF00696 Amino acid kinase family SUB_RS07160 PF00005 ABC transporter SUB_RS07170 PF02780 Transketolase, C-terminal domain SUB_RS07170 PF00456 Transketolase, thiamine diphosphate binding domain SUB_RS07170 PF02779 Transketolase, pyrimidine binding domain SUB_RS07175 PF00923 Transaldolase/Fructose-6-phosphate aldolase SUB_RS07185 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS07185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS07190 PF00230 Major intrinsic protein SUB_RS07195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SUB_RS07195 PF01266 FAD dependent oxidoreductase SUB_RS07200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SUB_RS07200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SUB_RS07205 PF05979 Bacterial protein of unknown function (DUF896) SUB_RS07210 PF02092 Glycyl-tRNA synthetase beta subunit SUB_RS07215 PF02091 Glycyl-tRNA synthetase alpha subunit SUB_RS07225 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SUB_RS07235 PF01979 Amidohydrolase family SUB_RS07245 PF02645 Uncharacterised protein, DegV family COG1307 SUB_RS07260 PF00232 Glycosyl hydrolase family 1 SUB_RS07270 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SUB_RS07275 PF03123 CAT RNA binding domain SUB_RS07275 PF00874 PRD domain SUB_RS07280 PF01263 Aldose 1-epimerase SUB_RS07285 PF01791 DeoC/LacD family aldolase SUB_RS07290 PF00294 pfkB family carbohydrate kinase SUB_RS07295 PF02502 Ribose/Galactose Isomerase SUB_RS07300 PF02502 Ribose/Galactose Isomerase SUB_RS07305 PF03611 PTS system sugar-specific permease component SUB_RS07320 PF00455 DeoR C terminal sensor domain SUB_RS07320 PF08220 DeoR-like helix-turn-helix domain SUB_RS07330 PF00403 Heavy-metal-associated domain SUB_RS07335 PF03965 Penicillinase repressor SUB_RS07340 PF02033 Ribosome-binding factor A SUB_RS07345 PF04760 Translation initiation factor IF-2, N-terminal region SUB_RS07345 PF00009 Elongation factor Tu GTP binding domain SUB_RS07345 PF11987 Translation-initiation factor 2 SUB_RS07350 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SUB_RS07355 PF04296 Protein of unknown function (DUF448) SUB_RS07360 PF13184 NusA-like KH domain SUB_RS07360 PF08529 NusA N-terminal domain SUB_RS07360 PF00575 S1 RNA binding domain SUB_RS07365 PF17384 RimP C-terminal SH3 domain SUB_RS07365 PF02576 RimP N-terminal domain SUB_RS07375 PF02390 Putative methyltransferase SUB_RS07385 PF05975 Bacterial ABC transporter protein EcsB SUB_RS07390 PF00005 ABC transporter SUB_RS07395 PF01230 HIT domain SUB_RS07405 PF03816 Cell envelope-related transcriptional attenuator domain SUB_RS07415 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SUB_RS07420 PF00860 Permease family SUB_RS07430 PF03610 PTS system fructose IIA component SUB_RS07430 PF03830 PTS system sorbose subfamily IIB component SUB_RS07440 PF03613 PTS system mannose/fructose/sorbose family IID component SUB_RS07455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SUB_RS07455 PF02403 Seryl-tRNA synthetase N-terminal domain SUB_RS07460 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SUB_RS07465 PF01039 Carboxyl transferase domain SUB_RS07465 PF17848 Acetyl-coA carboxylase zinc finger domain SUB_RS07470 PF02785 Biotin carboxylase C-terminal domain SUB_RS07470 PF00289 Biotin carboxylase, N-terminal domain SUB_RS07470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SUB_RS07475 PF07977 FabA-like domain SUB_RS07480 PF00364 Biotin-requiring enzyme SUB_RS07485 PF00109 Beta-ketoacyl synthase, N-terminal domain SUB_RS07485 PF02801 Beta-ketoacyl synthase, C-terminal domain SUB_RS07495 PF00698 Acyl transferase domain SUB_RS07500 PF03060 Nitronate monooxygenase SUB_RS07505 PF00550 Phosphopantetheine attachment site SUB_RS07510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SUB_RS07510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SUB_RS07520 PF00378 Enoyl-CoA hydratase/isomerase SUB_RS07525 PF01556 DnaJ C terminal domain SUB_RS07525 PF00226 DnaJ domain SUB_RS07525 PF00684 DnaJ central domain SUB_RS07530 PF00012 Hsp70 protein SUB_RS07535 PF01025 GrpE SUB_RS07540 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SUB_RS07540 PF01628 HrcA protein C terminal domain SUB_RS07545 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SUB_RS07545 PF05257 CHAP domain SUB_RS07550 PF02557 D-alanyl-D-alanine carboxypeptidase SUB_RS07555 PF00300 Histidine phosphatase superfamily (branch 1) SUB_RS07565 PF05167 Uncharacterised ACR (DUF711) SUB_RS07575 PF00313 'Cold-shock' DNA-binding domain SUB_RS07580 PF04226 Transglycosylase associated protein SUB_RS07585 PF00892 EamA-like transporter family SUB_RS07590 PF02637 GatB domain SUB_RS07590 PF02934 GatB/GatE catalytic domain SUB_RS07595 PF01425 Amidase SUB_RS07600 PF02686 Glu-tRNAGln amidotransferase C subunit SUB_RS07605 PF02896 PEP-utilising enzyme, TIM barrel domain SUB_RS07605 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SUB_RS07605 PF00391 PEP-utilising enzyme, mobile domain SUB_RS07610 PF03618 Kinase/pyrophosphorylase SUB_RS07615 PF00571 CBS domain SUB_RS07615 PF08279 HTH domain SUB_RS07625 PF01206 Sulfurtransferase TusA SUB_RS07625 PF00581 Rhodanese-like domain SUB_RS07630 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS07630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SUB_RS07640 PF02583 Metal-sensitive transcriptional repressor SUB_RS07645 PF00857 Isochorismatase family SUB_RS07650 PF06018 CodY GAF-like domain SUB_RS07650 PF08222 CodY helix-turn-helix domain SUB_RS07655 PF00155 Aminotransferase class I and II SUB_RS07660 PF00582 Universal stress protein family SUB_RS07670 PF00710 Asparaginase, N-terminal SUB_RS07670 PF17763 Glutaminase/Asparaginase C-terminal domain SUB_RS07675 PF00248 Aldo/keto reductase family SUB_RS07680 PF17191 RecG wedge domain SUB_RS07680 PF00271 Helicase conserved C-terminal domain SUB_RS07680 PF00270 DEAD/DEAH box helicase SUB_RS07685 PF01168 Alanine racemase, N-terminal domain SUB_RS07685 PF00842 Alanine racemase, C-terminal domain SUB_RS07690 PF01648 4'-phosphopantetheinyl transferase superfamily SUB_RS07695 PF07517 SecA DEAD-like domain SUB_RS07695 PF01043 SecA preprotein cross-linking domain SUB_RS07695 PF07516 SecA Wing and Scaffold domain SUB_RS07695 PF02810 SEC-C motif SUB_RS07700 PF01238 Phosphomannose isomerase type I SUB_RS07705 PF00232 Glycosyl hydrolase family 1 SUB_RS07710 PF02378 Phosphotransferase system, EIIC SUB_RS07720 PF00480 ROK family SUB_RS07725 PF02378 Phosphotransferase system, EIIC SUB_RS07725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SUB_RS07725 PF00367 phosphotransferase system, EIIB SUB_RS07730 PF00251 Glycosyl hydrolases family 32 N-terminal domain SUB_RS07730 PF08244 Glycosyl hydrolases family 32 C terminal SUB_RS07735 PF00356 Bacterial regulatory proteins, lacI family SUB_RS07740 PF01029 NusB family SUB_RS07745 PF03780 Asp23 family, cell envelope-related function SUB_RS07750 PF09285 Elongation factor P, C-terminal SUB_RS07750 PF01132 Elongation factor P (EF-P) OB domain SUB_RS07750 PF08207 Elongation factor P (EF-P) KOW-like domain SUB_RS07755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SUB_RS07760 PF01321 Creatinase/Prolidase N-terminal domain SUB_RS07760 PF00557 Metallopeptidase family M24 SUB_RS07765 PF00005 ABC transporter SUB_RS07765 PF17760 UvrA interaction domain SUB_RS07765 PF17755 UvrA DNA-binding domain SUB_RS07780 PF01084 Ribosomal protein S18 SUB_RS07785 PF00436 Single-strand binding protein family SUB_RS07790 PF01250 Ribosomal protein S6 SUB_RS07795 PF14815 NUDIX domain SUB_RS07795 PF00730 HhH-GPD superfamily base excision DNA repair protein SUB_RS07800 PF00085 Thioredoxin SUB_RS07805 PF00488 MutS domain V SUB_RS07805 PF01713 Smr domain SUB_RS07820 PF11858 Domain of unknown function (DUF3378) SUB_RS07820 PF01351 Ribonuclease HII SUB_RS07825 PF10502 Signal peptidase, peptidase S26 SUB_RS07830 PF14490 Helix-hairpin-helix containing domain SUB_RS07830 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SUB_RS07830 PF13538 UvrD-like helicase C-terminal domain SUB_RS07840 PF11798 IMS family HHH motif SUB_RS07840 PF00817 impB/mucB/samB family SUB_RS07840 PF11799 impB/mucB/samB family C-terminal domain SUB_RS07845 PF02901 Pyruvate formate lyase-like SUB_RS07845 PF01228 Glycine radical SUB_RS07855 PF00144 Beta-lactamase SUB_RS07870 PF00230 Major intrinsic protein SUB_RS07875 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SUB_RS07875 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SUB_RS07875 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SUB_RS07895 PF00232 Glycosyl hydrolase family 1 SUB_RS07910 PF01380 SIS domain SUB_RS07910 PF01418 Helix-turn-helix domain, rpiR family SUB_RS07915 PF01293 Phosphoenolpyruvate carboxykinase SUB_RS07920 PF00364 Biotin-requiring enzyme SUB_RS07920 PF00682 HMGL-like SUB_RS07920 PF02436 Conserved carboxylase domain SUB_RS07925 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SUB_RS07930 PF04223 Citrate lyase, alpha subunit (CitF) SUB_RS07940 PF06857 Malonate decarboxylase delta subunit (MdcD) SUB_RS07950 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SUB_RS07955 PF00364 Biotin-requiring enzyme SUB_RS07975 PF00512 His Kinase A (phospho-acceptor) domain SUB_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SUB_RS07985 PF01081 KDPG and KHG aldolase SUB_RS07990 PF00294 pfkB family carbohydrate kinase SUB_RS08005 PF03812 2-keto-3-deoxygluconate permease SUB_RS08010 PF04962 KduI/IolB family SUB_RS08015 PF00356 Bacterial regulatory proteins, lacI family SUB_RS08030 PF00589 Phage integrase family SUB_RS08030 PF14659 Phage integrase, N-terminal SAM-like domain SUB_RS08035 PF02575 YbaB/EbfC DNA-binding family SUB_RS08045 PF04394 Protein of unknown function, DUF536 SUB_RS08045 PF08279 HTH domain SUB_RS08055 PF00253 Ribosomal protein S14p/S29e SUB_RS08060 PF00814 Glycoprotease family SUB_RS08070 PF00814 Glycoprotease family SUB_RS08075 PF07288 Protein of unknown function (DUF1447) SUB_RS08080 PF17770 Ribonuclease J C-terminal domain SUB_RS08080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SUB_RS08080 PF00753 Metallo-beta-lactamase superfamily SUB_RS08085 PF00005 ABC transporter SUB_RS08085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SUB_RS08090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SUB_RS08090 PF00005 ABC transporter SUB_RS08095 PF12911 N-terminal TM domain of oligopeptide transport permease C SUB_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS08105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SUB_RS08110 PF00120 Glutamine synthetase, catalytic domain SUB_RS08110 PF03951 Glutamine synthetase, beta-Grasp domain SUB_RS08115 PF13411 MerR HTH family regulatory protein SUB_RS08125 PF00162 Phosphoglycerate kinase SUB_RS08130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SUB_RS08130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SUB_RS08135 PF03144 Elongation factor Tu domain 2 SUB_RS08135 PF00009 Elongation factor Tu GTP binding domain SUB_RS08135 PF03764 Elongation factor G, domain IV SUB_RS08135 PF14492 Elongation Factor G, domain II SUB_RS08135 PF00679 Elongation factor G C-terminus SUB_RS08140 PF00177 Ribosomal protein S7p/S5e SUB_RS08145 PF00164 Ribosomal protein S12/S23 SUB_RS08155 PF09182 Bacterial purine repressor, N-terminal SUB_RS08155 PF00156 Phosphoribosyl transferase domain SUB_RS08160 PF01966 HD domain SUB_RS08165 PF02646 RmuC family SUB_RS08170 PF04263 Thiamin pyrophosphokinase, catalytic domain SUB_RS08170 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SUB_RS08175 PF00834 Ribulose-phosphate 3 epimerase family SUB_RS08180 PF03193 RsgA GTPase SUB_RS08180 PF16745 RsgA N-terminal domain SUB_RS08185 PF07690 Major Facilitator Superfamily SUB_RS08195 PF00398 Ribosomal RNA adenine dimethylase SUB_RS08205 PF13331 Domain of unknown function (DUF4093) SUB_RS08210 PF01026 TatD related DNase SUB_RS08220 PF05448 Acetyl xylan esterase (AXE1) SUB_RS08225 PF00480 ROK family SUB_RS08230 PF00701 Dihydrodipicolinate synthetase family SUB_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS08250 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS08255 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SUB_RS08260 PF00468 Ribosomal protein L34 SUB_RS08275 PF00072 Response regulator receiver domain SUB_RS08275 PF04397 LytTr DNA-binding domain SUB_RS08285 PF00005 ABC transporter SUB_RS08295 PF02096 60Kd inner membrane protein SUB_RS08300 PF00825 Ribonuclease P SUB_RS08305 PF14698 Argininosuccinate lyase C-terminal SUB_RS08305 PF00206 Lyase SUB_RS08310 PF00764 Arginosuccinate synthase SUB_RS08355 PF00749 tRNA synthetases class I (E and Q), catalytic domain SUB_RS08360 PF01987 Mitochondrial biogenesis AIM24 SUB_RS08365 PF00484 Carbonic anhydrase SUB_RS08370 PF18073 Rubredoxin metal binding domain SUB_RS08375 PF00692 dUTPase SUB_RS08380 PF04304 Protein of unknown function (DUF454) SUB_RS08385 PF04205 FMN-binding domain SUB_RS08385 PF03358 NADPH-dependent FMN reductase SUB_RS08385 PF00890 FAD binding domain SUB_RS08390 PF04205 FMN-binding domain SUB_RS08390 PF03358 NADPH-dependent FMN reductase SUB_RS08390 PF00890 FAD binding domain SUB_RS08400 PF00664 ABC transporter transmembrane region SUB_RS08400 PF00005 ABC transporter SUB_RS08405 PF00005 ABC transporter SUB_RS08405 PF00664 ABC transporter transmembrane region SUB_RS08415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SUB_RS08415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SUB_RS08420 PF00483 Nucleotidyl transferase SUB_RS08430 PF01812 5-formyltetrahydrofolate cyclo-ligase family SUB_RS08435 PF01554 MatE SUB_RS08440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SUB_RS08440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SUB_RS08440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SUB_RS08445 PF00535 Glycosyl transferase family 2 SUB_RS08450 PF07687 Peptidase dimerisation domain SUB_RS08450 PF01546 Peptidase family M20/M25/M40 SUB_RS08455 PF00132 Bacterial transferase hexapeptide (six repeats) SUB_RS08455 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SUB_RS08455 PF14602 Hexapeptide repeat of succinyl-transferase SUB_RS08460 PF03829 PTS system glucitol/sorbitol-specific IIA component SUB_RS08465 PF03612 Sorbitol phosphotransferase enzyme II N-terminus SUB_RS08465 PF07663 Sorbitol phosphotransferase enzyme II C-terminus SUB_RS08470 PF03608 PTS system enzyme II sorbitol-specific factor SUB_RS08480 PF00874 PRD domain SUB_RS08480 PF05043 Mga helix-turn-helix domain SUB_RS08480 PF08279 HTH domain SUB_RS08480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS08485 PF00106 short chain dehydrogenase SUB_RS08490 PF00342 Phosphoglucose isomerase SUB_RS08495 PF14437 MafB19-like deaminase SUB_RS08500 PF12706 Beta-lactamase superfamily domain SUB_RS08505 PF02632 BioY family SUB_RS08510 PF01702 Queuine tRNA-ribosyltransferase SUB_RS08520 PF01475 Ferric uptake regulator family SUB_RS08525 PF13380 CoA binding domain SUB_RS08530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SUB_RS08530 PF01367 5'-3' exonuclease, C-terminal SAM fold SUB_RS08530 PF00476 DNA polymerase family A SUB_RS08535 PF00528 Binding-protein-dependent transport system inner membrane component SUB_RS08540 PF00005 ABC transporter SUB_RS08540 PF00571 CBS domain SUB_RS08545 PF00781 Diacylglycerol kinase catalytic domain SUB_RS08560 PF00596 Class II Aldolase and Adducin N-terminal domain SUB_RS08565 PF01261 Xylose isomerase-like TIM barrel SUB_RS08570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SUB_RS08575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS08580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS08585 PF03611 PTS system sugar-specific permease component SUB_RS08590 PF02595 Glycerate kinase family SUB_RS08595 PF09334 tRNA synthetases class I (M) SUB_RS08595 PF00133 tRNA synthetases class I (I, L, M and V) SUB_RS08595 PF08264 Anticodon-binding domain of tRNA SUB_RS08595 PF13603 Leucyl-tRNA synthetase, Domain 2 SUB_RS08605 PF00467 KOW motif SUB_RS08605 PF02357 Transcription termination factor nusG SUB_RS08615 PF00905 Penicillin binding protein transpeptidase domain SUB_RS08615 PF00912 Transglycosylase SUB_RS08630 PF01479 S4 domain SUB_RS08630 PF00849 RNA pseudouridylate synthase SUB_RS08640 PF03577 Peptidase family C69 SUB_RS08650 PF00118 TCP-1/cpn60 chaperonin family SUB_RS08655 PF00166 Chaperonin 10 Kd subunit SUB_RS08660 PF00004 ATPase family associated with various cellular activities (AAA) SUB_RS08660 PF17871 AAA lid domain SUB_RS08660 PF02861 Clp amino terminal domain, pathogenicity island component SUB_RS08660 PF10431 C-terminal, D2-small domain, of ClpB protein SUB_RS08660 PF07724 AAA domain (Cdc48 subfamily) SUB_RS08665 PF17727 CtsR C-terminal dimerization domain SUB_RS08665 PF05848 CtsR N-terminal HTH domain SUB_RS08670 PF00313 'Cold-shock' DNA-binding domain SUB_RS08680 PF00999 Sodium/hydrogen exchanger family SUB_RS08685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS08690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS08695 PF01613 Flavin reductase like domain SUB_RS08700 PF01738 Dienelactone hydrolase family SUB_RS08710 PF00578 AhpC/TSA family SUB_RS08715 PF13192 Thioredoxin domain SUB_RS08715 PF07992 Pyridine nucleotide-disulphide oxidoreductase SUB_RS08720 PF00318 Ribosomal protein S2 SUB_RS08725 PF00889 Elongation factor TS SUB_RS08730 PF01431 Peptidase family M13 SUB_RS08730 PF05649 Peptidase family M13 SUB_RS08735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SUB_RS08735 PF02780 Transketolase, C-terminal domain SUB_RS08735 PF02779 Transketolase, pyrimidine binding domain SUB_RS08740 PF00456 Transketolase, thiamine diphosphate binding domain SUB_RS08745 PF03611 PTS system sugar-specific permease component SUB_RS08750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SUB_RS08755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SUB_RS08760 PF00128 Alpha amylase, catalytic domain SUB_RS08760 PF16657 Maltogenic Amylase, C-terminal domain SUB_RS08765 PF00367 phosphotransferase system, EIIB SUB_RS08765 PF02378 Phosphotransferase system, EIIC SUB_RS08770 PF07702 UTRA domain SUB_RS08770 PF00392 Bacterial regulatory proteins, gntR family SUB_RS08775 PF01638 HxlR-like helix-turn-helix SUB_RS08780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SUB_RS08785 PF03883 Peroxide stress protein YaaA SUB_RS08800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SUB_RS08805 PF03477 ATP cone domain SUB_RS08805 PF13597 Anaerobic ribonucleoside-triphosphate reductase SUB_RS08815 PF06949 Protein of unknown function (DUF1292) SUB_RS08820 PF03652 Holliday junction resolvase SUB_RS08825 PF06135 IreB regulatory phosphoprotein SUB_RS08830 PF03960 ArsC family SUB_RS08835 PF00154 recA bacterial DNA recombination protein SUB_RS08840 PF00994 Probable molybdopterin binding domain SUB_RS08840 PF18146 Damage-inducible protein CinA KH domain SUB_RS08840 PF02464 Competence-damaged protein SUB_RS08845 PF00117 Glutamine amidotransferase class-I SUB_RS08845 PF00958 GMP synthase C terminal domain SUB_RS08845 PF03352 Methyladenine glycosylase SUB_RS08845 PF13302 Acetyltransferase (GNAT) domain SUB_RS08845 PF13673 Acetyltransferase (GNAT) domain SUB_RS08850 PF07499 RuvA, C-terminal domain SUB_RS08850 PF01330 RuvA N terminal domain SUB_RS08860 PF01119 DNA mismatch repair protein, C-terminal domain SUB_RS08860 PF08676 MutL C terminal dimerisation domain SUB_RS08875 PF05190 MutS family domain IV SUB_RS08875 PF05192 MutS domain III SUB_RS08875 PF01624 MutS domain I SUB_RS08875 PF05188 MutS domain II SUB_RS08875 PF00488 MutS domain V SUB_RS08885 PF01316 Arginine repressor, DNA binding domain SUB_RS08885 PF02863 Arginine repressor, C-terminal domain SUB_RS08890 PF03485 Arginyl tRNA synthetase N terminal domain SUB_RS08890 PF05746 DALR anticodon binding domain SUB_RS08890 PF00750 tRNA synthetases class I (R) SUB_RS08895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SUB_RS08895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SUB_RS08905 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SUB_RS08905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SUB_RS08910 PF01336 OB-fold nucleic acid binding domain SUB_RS08910 PF00152 tRNA synthetases class II (D, K and N) SUB_RS08910 PF02938 GAD domain SUB_RS08915 PF13393 Histidyl-tRNA synthetase SUB_RS08915 PF03129 Anticodon binding domain SUB_RS08920 PF01783 Ribosomal L32p protein family SUB_RS08925 PF00471 Ribosomal protein L33 SUB_RS08930 PF00293 NUDIX domain SUB_RS08945 PF13556 PucR C-terminal helix-turn-helix domain SUB_RS08945 PF07905 Purine catabolism regulatory protein-like family SUB_RS08945 PF17853 GGDEF-like domain SUB_RS08950 PF01144 Coenzyme A transferase SUB_RS08955 PF13193 AMP-binding enzyme C-terminal domain SUB_RS08955 PF00501 AMP-binding enzyme SUB_RS08960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUB_RS08960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUB_RS08965 PF02803 Thiolase, C-terminal domain SUB_RS08965 PF00108 Thiolase, N-terminal domain SUB_RS08970 PF02770 Acyl-CoA dehydrogenase, middle domain SUB_RS08970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SUB_RS08970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SUB_RS08975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SUB_RS08975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SUB_RS08985 PF03773 Predicted permease SUB_RS09015 PF06993 Protein of unknown function (DUF1304) SUB_RS09030 PF13784 Fic/DOC family N-terminal SUB_RS09030 PF02661 Fic/DOC family SUB_RS09125 PF00589 Phage integrase family SUB_RS09125 PF14659 Phage integrase, N-terminal SAM-like domain SUB_RS09130 PF00163 Ribosomal protein S4/S9 N-terminal domain SUB_RS09130 PF01479 S4 domain SUB_RS09140 PF03796 DnaB-like helicase C terminal domain SUB_RS09140 PF00772 DnaB-like helicase N terminal domain SUB_RS09145 PF01281 Ribosomal protein L9, N-terminal domain SUB_RS09145 PF03948 Ribosomal protein L9, C-terminal domain SUB_RS09150 PF01368 DHH family SUB_RS09150 PF02272 DHHA1 domain SUB_RS09155 PF13932 GidA associated domain SUB_RS09155 PF01134 Glucose inhibited division protein A SUB_RS09165 PF01842 ACT domain SUB_RS09165 PF03315 Serine dehydratase beta chain SUB_RS09170 PF03313 Serine dehydratase alpha chain SUB_RS09175 PF13419 Haloacid dehalogenase-like hydrolase SUB_RS09180 PF06737 Transglycosylase-like domain SUB_RS09185 PF02361 Cobalt transport protein SUB_RS09190 PF00005 ABC transporter SUB_RS09195 PF00005 ABC transporter SUB_RS09200 PF01066 CDP-alcohol phosphatidyltransferase SUB_RS09210 PF00675 Insulinase (Peptidase family M16) SUB_RS09210 PF05193 Peptidase M16 inactive domain SUB_RS09225 PF02463 RecF/RecN/SMC N terminal domain SUB_RS09230 PF06800 Sugar transport protein SUB_RS09235 PF00478 IMP dehydrogenase / GMP reductase domain SUB_RS09235 PF00571 CBS domain SUB_RS09240 PF00579 tRNA synthetases class I (W and Y) SUB_RS09245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SUB_RS09245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SUB_RS09250 PF00005 ABC transporter SUB_RS09250 PF12848 ABC transporter SUB_RS09275 PF02590 Predicted SPOUT methyltransferase SUB_RS09280 PF13180 PDZ domain SUB_RS09285 PF02195 ParB-like nuclease domain SUB_RS09285 PF17762 HTH domain found in ParB protein SUB_RS09325 PF02417 Chromate transporter SUB_RS09365 PF01381 Helix-turn-helix