SMD11_RS00005	SM00487	DEAD-like helicases superfamily
SMD11_RS00005	SM00490	helicase superfamily c-terminal domain
SMD11_RS00035	SM00822	SMD11_RS00035
SMD11_RS00040	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS00085	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS00085	SM01043	Bacterial transcriptional activator domain
SMD11_RS00125	SM00245	tail specific protease
SMD11_RS00130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS00160	SM01043	Bacterial transcriptional activator domain
SMD11_RS00215	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS00335	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS00385	SM00905	Dihydroneopterin aldolase
SMD11_RS00395	SM00028	Tetratricopeptide repeats
SMD11_RS00395	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS00410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS00410	SM00419	helix_turn_helix, cAMP Regulatory protein
SMD11_RS00430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS00430	SM00091	PAS domain
SMD11_RS00430	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS00450	SM01116	SMD11_RS00450
SMD11_RS00455	SM00947	Carbonic anhydrase
SMD11_RS00505	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS00515	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS00520	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS00520	SM00448	cheY-homologous receiver domain
SMD11_RS00535	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS00595	SM00825	Beta-ketoacyl synthase
SMD11_RS00655	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS00735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS00840	SM00823	Phosphopantetheine attachment site
SMD11_RS00840	SM00824	Thioesterase
SMD11_RS00840	SM00825	Beta-ketoacyl synthase
SMD11_RS00840	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS00845	SM00822	SMD11_RS00845
SMD11_RS00845	SM00823	Phosphopantetheine attachment site
SMD11_RS00845	SM00825	Beta-ketoacyl synthase
SMD11_RS00845	SM00826	SMD11_RS00845
SMD11_RS00845	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS00845	SM01294	SMD11_RS00845
SMD11_RS00855	SM00822	SMD11_RS00855
SMD11_RS00855	SM00823	Phosphopantetheine attachment site
SMD11_RS00855	SM00825	Beta-ketoacyl synthase
SMD11_RS00855	SM00826	SMD11_RS00855
SMD11_RS00855	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS00855	SM01294	SMD11_RS00855
SMD11_RS00870	SM00822	SMD11_RS00870
SMD11_RS00895	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS00915	SM00870	SMD11_RS00915
SMD11_RS00965	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS01045	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS01045	SM00448	cheY-homologous receiver domain
SMD11_RS01060	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS01085	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS01120	SM00947	Carbonic anhydrase
SMD11_RS01135	SM00448	cheY-homologous receiver domain
SMD11_RS01135	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS01140	SM00387	Histidine kinase-like ATPases
SMD11_RS01140	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS01155	SM01192	SMD11_RS01155
SMD11_RS01155	SM01193	SMD11_RS01155
SMD11_RS01160	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS01165	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SMD11_RS01175	SM00823	Phosphopantetheine attachment site
SMD11_RS01175	SM00824	Thioesterase
SMD11_RS01185	SM00563	Phosphate acyltransferases
SMD11_RS01260	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS01275	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS01290	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS01325	SM00823	Phosphopantetheine attachment site
SMD11_RS01340	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS01350	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS01435	SM00903	Flavin reductase like domain
SMD11_RS01440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS01440	SM00895	SMD11_RS01440
SMD11_RS01475	SM00458	Ricin-type beta-trefoil
SMD11_RS01495	SM01110	SMD11_RS01495
SMD11_RS01505	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS01505	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS01505	SM01043	Bacterial transcriptional activator domain
SMD11_RS01510	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS01590	SM00226	Low molecular weight phosphatase family
SMD11_RS01595	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS01610	SM00822	SMD11_RS01610
SMD11_RS01625	SM00028	Tetratricopeptide repeats
SMD11_RS01645	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SMD11_RS01685	SM00822	SMD11_RS01685
SMD11_RS01695	SM00422	helix_turn_helix, mercury resistance
SMD11_RS01695	SM00871	Bacterial transcription activator, effector binding domain
SMD11_RS01770	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS01770	SM00871	Bacterial transcription activator, effector binding domain
SMD11_RS01910	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS01915	SM00824	Thioesterase
SMD11_RS01925	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS01950	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS01985	SM00422	helix_turn_helix, mercury resistance
SMD11_RS01990	SM00458	Ricin-type beta-trefoil
SMD11_RS01995	SM00867	YceI-like domain 
SMD11_RS02000	SM00320	WD40 repeats
SMD11_RS02040	SM00422	helix_turn_helix, mercury resistance
SMD11_RS02045	SM00822	SMD11_RS02045
SMD11_RS02070	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS02120	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS02140	SM00344	helix_turn_helix ASNC type
SMD11_RS02215	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS02310	SM00422	helix_turn_helix, mercury resistance
SMD11_RS02365	SM00344	helix_turn_helix ASNC type
SMD11_RS02395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS02395	SM00895	SMD11_RS02395
SMD11_RS02430	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS02445	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS02465	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS02465	SM01043	Bacterial transcriptional activator domain
SMD11_RS02485	SM00823	Phosphopantetheine attachment site
SMD11_RS02525	SM00028	Tetratricopeptide repeats
SMD11_RS02525	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS02525	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS02525	SM01043	Bacterial transcriptional activator domain
SMD11_RS02535	SM00560	LamG-like jellyroll fold domain
SMD11_RS02545	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS02545	SM00419	helix_turn_helix, cAMP Regulatory protein
SMD11_RS02650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS02650	SM00895	SMD11_RS02650
SMD11_RS02665	SM01130	SMD11_RS02665
SMD11_RS02685	SM01011	Aminopeptidase P, N-terminal domain
SMD11_RS02705	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS02710	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS02755	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS02805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS02820	SM00752	Horizontally Transferred TransMembrane Domain
SMD11_RS02835	SM00422	helix_turn_helix, mercury resistance
SMD11_RS02925	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS02955	SM01236	SMD11_RS02955
SMD11_RS02960	SM01130	SMD11_RS02960
SMD11_RS02975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS02975	SM00895	SMD11_RS02975
SMD11_RS03010	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SMD11_RS03030	SM00923	MbtH-like protein
SMD11_RS03035	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS03045	SM00706	Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
SMD11_RS03075	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS03075	SM01043	Bacterial transcriptional activator domain
SMD11_RS03085	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS03100	SM01350	SMD11_RS03100
SMD11_RS03120	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03120	SM00710	Parallel beta-helix repeats
SMD11_RS03120	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SMD11_RS03130	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS03130	SM01134	SMD11_RS03130
SMD11_RS03175	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS03175	SM00448	cheY-homologous receiver domain
SMD11_RS03180	SM00387	Histidine kinase-like ATPases
SMD11_RS03205	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS03215	SM00893	Electron transfer flavoprotein domain
SMD11_RS03220	SM00893	Electron transfer flavoprotein domain
SMD11_RS03225	SM00903	Flavin reductase like domain
SMD11_RS03235	SM00563	Phosphate acyltransferases
SMD11_RS03255	SM00062	Bacterial periplasmic substrate-binding proteins
SMD11_RS03255	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SMD11_RS03265	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03295	SM00822	SMD11_RS03295
SMD11_RS03300	SM00825	Beta-ketoacyl synthase
SMD11_RS03305	SM00825	Beta-ketoacyl synthase
SMD11_RS03320	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS03330	SM00903	Flavin reductase like domain
SMD11_RS03355	SM00829	Enoylreductase
SMD11_RS03385	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS03385	SM01043	Bacterial transcriptional activator domain
SMD11_RS03400	SM00014	Acid phosphatase homologues
SMD11_RS03470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS03480	SM00986	Uracil DNA glycosylase superfamily
SMD11_RS03480	SM00987	UreE urease accessory protein, C-terminal domain 
SMD11_RS03505	SM00344	helix_turn_helix ASNC type
SMD11_RS03545	SM01038	Beta galactosidase small chain
SMD11_RS03565	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03570	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS03585	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03595	SM00487	DEAD-like helicases superfamily
SMD11_RS03595	SM00490	helicase superfamily c-terminal domain
SMD11_RS03610	SM00960	Roadblock/LC7 domain
SMD11_RS03655	SM00487	DEAD-like helicases superfamily
SMD11_RS03655	SM00490	helicase superfamily c-terminal domain
SMD11_RS03665	SM00867	YceI-like domain 
SMD11_RS03685	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS03690	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS03725	SM00829	Enoylreductase
SMD11_RS03730	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS03760	SM00872	Alpha mannosidase, middle domain
SMD11_RS03775	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03775	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SMD11_RS03790	SM00882	Coenzyme A transferase
SMD11_RS03795	SM00882	Coenzyme A transferase
SMD11_RS03805	SM00822	SMD11_RS03805
SMD11_RS03820	SM00829	Enoylreductase
SMD11_RS03825	SM00822	SMD11_RS03825
SMD11_RS03865	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS03880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS03880	SM00387	Histidine kinase-like ATPases
SMD11_RS03880	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS03885	SM00448	cheY-homologous receiver domain
SMD11_RS03885	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS03890	SM00636	SMD11_RS03890
SMD11_RS03975	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS03985	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SMD11_RS03985	SM01232	SMD11_RS03985
SMD11_RS04005	SM00091	PAS domain
SMD11_RS04005	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS04015	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04060	SM01209	SMD11_RS04060
SMD11_RS04085	SM01236	SMD11_RS04085
SMD11_RS04090	SM00704	CDGSH-type zinc finger. Function unknown.
SMD11_RS04100	SM00020	Trypsin-like serine protease
SMD11_RS04120	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS04140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS04140	SM00091	PAS domain
SMD11_RS04140	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS04165	SM00644	SMD11_RS04165
SMD11_RS04185	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS04200	SM00448	cheY-homologous receiver domain
SMD11_RS04200	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS04205	SM00387	Histidine kinase-like ATPases
SMD11_RS04205	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS04265	SM00028	Tetratricopeptide repeats
SMD11_RS04270	SM00028	Tetratricopeptide repeats
SMD11_RS04270	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS04270	SM01043	Bacterial transcriptional activator domain
SMD11_RS04290	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS04295	SM00822	SMD11_RS04295
SMD11_RS04335	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS04365	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SMD11_RS04400	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS04405	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS04430	SM00091	PAS domain
SMD11_RS04430	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS04445	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04455	SM00822	SMD11_RS04455
SMD11_RS04455	SM00823	Phosphopantetheine attachment site
SMD11_RS04455	SM00825	Beta-ketoacyl synthase
SMD11_RS04455	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS04455	SM01294	SMD11_RS04455
SMD11_RS04460	SM00825	Beta-ketoacyl synthase
SMD11_RS04475	SM00829	Enoylreductase
SMD11_RS04490	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS04510	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS04530	SM00923	MbtH-like protein
SMD11_RS04535	SM00823	Phosphopantetheine attachment site
SMD11_RS04535	SM00824	Thioesterase
SMD11_RS04550	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS04590	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04620	SM00823	Phosphopantetheine attachment site
SMD11_RS04620	SM01294	SMD11_RS04620
SMD11_RS04660	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04660	SM00930	SMD11_RS04660
SMD11_RS04765	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS04810	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04855	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS04855	SM01260	SMD11_RS04855
SMD11_RS04865	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS04865	SM00448	cheY-homologous receiver domain
SMD11_RS04915	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS04995	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS04995	SM01027	Beta-Casp domain
SMD11_RS05000	SM00831	Cation transporter/ATPase, N-terminus
SMD11_RS05020	SM00831	Cation transporter/ATPase, N-terminus
SMD11_RS05025	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS05060	SM00881	CoA binding domain
SMD11_RS05145	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS05150	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS05155	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS05165	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS05280	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS05305	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS05350	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS05425	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS05445	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS05445	SM00732	Likely ribonuclease with RNase H fold.
SMD11_RS05450	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS05455	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SMD11_RS05470	SM00422	helix_turn_helix, mercury resistance
SMD11_RS05500	SM01130	SMD11_RS05500
SMD11_RS05545	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SMD11_RS05550	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS05560	SM00823	Phosphopantetheine attachment site
SMD11_RS05640	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS05640	SM01043	Bacterial transcriptional activator domain
SMD11_RS05650	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS05650	SM00448	cheY-homologous receiver domain
SMD11_RS05655	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS05660	SM00903	Flavin reductase like domain
SMD11_RS05685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS05760	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS05765	SM00829	Enoylreductase
SMD11_RS05800	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS05800	SM01043	Bacterial transcriptional activator domain
SMD11_RS05805	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS05805	SM01043	Bacterial transcriptional activator domain
SMD11_RS05845	SM00822	SMD11_RS05845
SMD11_RS05855	SM00857	Resolvase, N terminal domain
SMD11_RS05885	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS05905	SM00482	DNA polymerase A domain
SMD11_RS05960	SM00400	zinc finger
SMD11_RS06000	SM00507	HNH nucleases
SMD11_RS06260	SM01012	SMD11_RS06260
SMD11_RS06295	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS06300	SM00014	Acid phosphatase homologues
SMD11_RS06300	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SMD11_RS06335	SM00822	SMD11_RS06335
SMD11_RS06355	SM00823	Phosphopantetheine attachment site
SMD11_RS06355	SM00824	Thioesterase
SMD11_RS06360	SM00823	Phosphopantetheine attachment site
SMD11_RS06380	SM00822	SMD11_RS06380
SMD11_RS06400	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS06435	SM00903	Flavin reductase like domain
SMD11_RS06445	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS06460	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS06475	SM00567	E-Z type HEAT repeats
SMD11_RS06490	SM00829	Enoylreductase
SMD11_RS06565	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS06565	SM00478	endonuclease III
SMD11_RS06565	SM01009	AlkA N-terminal domain
SMD11_RS06615	SM00422	helix_turn_helix, mercury resistance
SMD11_RS06640	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS06670	SM00429	ig-like, plexins, transcription factors
SMD11_RS06685	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SMD11_RS06700	SM00823	Phosphopantetheine attachment site
SMD11_RS06705	SM00923	MbtH-like protein
SMD11_RS06730	SM00062	Bacterial periplasmic substrate-binding proteins
SMD11_RS06735	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS06740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS06740	SM00866	SMD11_RS06740
SMD11_RS06760	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS06770	SM00903	Flavin reductase like domain
SMD11_RS06795	SM01209	SMD11_RS06795
SMD11_RS06800	SM00257	Lysin motif
SMD11_RS06805	SM00458	Ricin-type beta-trefoil
SMD11_RS06820	SM00028	Tetratricopeptide repeats
SMD11_RS06820	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS06820	SM01043	Bacterial transcriptional activator domain
SMD11_RS06825	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS06825	SM01043	Bacterial transcriptional activator domain
SMD11_RS06840	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS06855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS06855	SM00866	SMD11_RS06855
SMD11_RS06885	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS06910	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS06970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS07005	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS07035	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07040	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07060	SM00831	Cation transporter/ATPase, N-terminus
SMD11_RS07085	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SMD11_RS07095	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SMD11_RS07115	SM00889	Elongation factor G, domain IV
SMD11_RS07125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS07125	SM00895	SMD11_RS07125
SMD11_RS07150	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS07165	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS07165	SM00478	endonuclease III
SMD11_RS07165	SM01009	AlkA N-terminal domain
SMD11_RS07225	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07260	SM00108	Bulb-type mannose-specific lectin
SMD11_RS07275	SM00479	SMD11_RS07275
SMD11_RS07285	SM00642	Alpha-amylase domain
SMD11_RS07290	SM00642	Alpha-amylase domain
SMD11_RS07305	SM00642	Alpha-amylase domain
SMD11_RS07325	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS07325	SM00448	cheY-homologous receiver domain
SMD11_RS07330	SM00387	Histidine kinase-like ATPases
SMD11_RS07340	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07370	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07425	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS07460	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS07465	SM00341	Helicase and RNase D C-terminal
SMD11_RS07465	SM00474	3'-5' exonuclease
SMD11_RS07525	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS07535	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS07565	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS07610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS07620	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS07645	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS07700	SM00267	diguanylate cyclase
SMD11_RS07720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS07725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS07745	SM00825	Beta-ketoacyl synthase
SMD11_RS07750	SM00825	Beta-ketoacyl synthase
SMD11_RS07760	SM00825	Beta-ketoacyl synthase
SMD11_RS07770	SM00822	SMD11_RS07770
SMD11_RS07780	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS07785	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS07785	SM01043	Bacterial transcriptional activator domain
SMD11_RS07865	SM01236	SMD11_RS07865
SMD11_RS07870	SM01130	SMD11_RS07870
SMD11_RS07885	SM00867	YceI-like domain 
SMD11_RS07890	SM00450	Rhodanese Homology Domain
SMD11_RS07895	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS08000	SM00650	Ribosomal RNA adenine dimethylases
SMD11_RS08005	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08035	SM00822	SMD11_RS08035
SMD11_RS08035	SM00823	Phosphopantetheine attachment site
SMD11_RS08035	SM00824	Thioesterase
SMD11_RS08035	SM00825	Beta-ketoacyl synthase
SMD11_RS08035	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08035	SM01294	SMD11_RS08035
SMD11_RS08040	SM00822	SMD11_RS08040
SMD11_RS08040	SM00823	Phosphopantetheine attachment site
SMD11_RS08040	SM00825	Beta-ketoacyl synthase
SMD11_RS08040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08040	SM01294	SMD11_RS08040
SMD11_RS08045	SM00822	SMD11_RS08045
SMD11_RS08045	SM00823	Phosphopantetheine attachment site
SMD11_RS08045	SM00825	Beta-ketoacyl synthase
SMD11_RS08045	SM00826	SMD11_RS08045
SMD11_RS08045	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08045	SM00829	Enoylreductase
SMD11_RS08045	SM01294	SMD11_RS08045
SMD11_RS08050	SM00822	SMD11_RS08050
SMD11_RS08050	SM00823	Phosphopantetheine attachment site
SMD11_RS08050	SM00826	SMD11_RS08050
SMD11_RS08050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08050	SM01294	SMD11_RS08050
SMD11_RS08055	SM00825	Beta-ketoacyl synthase
SMD11_RS08060	SM00822	SMD11_RS08060
SMD11_RS08060	SM00823	Phosphopantetheine attachment site
SMD11_RS08060	SM00825	Beta-ketoacyl synthase
SMD11_RS08060	SM00826	SMD11_RS08060
SMD11_RS08060	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08060	SM01294	SMD11_RS08060
SMD11_RS08115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS08175	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS08210	SM00824	Thioesterase
SMD11_RS08220	SM00822	SMD11_RS08220
SMD11_RS08220	SM00823	Phosphopantetheine attachment site
SMD11_RS08220	SM00825	Beta-ketoacyl synthase
SMD11_RS08220	SM00826	SMD11_RS08220
SMD11_RS08220	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08220	SM01294	SMD11_RS08220
SMD11_RS08255	SM00822	SMD11_RS08255
SMD11_RS08255	SM00823	Phosphopantetheine attachment site
SMD11_RS08255	SM00825	Beta-ketoacyl synthase
SMD11_RS08255	SM00826	SMD11_RS08255
SMD11_RS08255	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08255	SM00829	Enoylreductase
SMD11_RS08255	SM01294	SMD11_RS08255
SMD11_RS08265	SM00822	SMD11_RS08265
SMD11_RS08265	SM00823	Phosphopantetheine attachment site
SMD11_RS08265	SM00825	Beta-ketoacyl synthase
SMD11_RS08265	SM00826	SMD11_RS08265
SMD11_RS08265	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08265	SM01294	SMD11_RS08265
SMD11_RS08270	SM00822	SMD11_RS08270
SMD11_RS08270	SM00823	Phosphopantetheine attachment site
SMD11_RS08270	SM00825	Beta-ketoacyl synthase
SMD11_RS08270	SM00826	SMD11_RS08270
SMD11_RS08270	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS08270	SM01294	SMD11_RS08270
SMD11_RS08280	SM00823	Phosphopantetheine attachment site
SMD11_RS08285	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS08290	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS08290	SM00448	cheY-homologous receiver domain
SMD11_RS08295	SM00387	Histidine kinase-like ATPases
SMD11_RS08305	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08315	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS08355	SM00960	Roadblock/LC7 domain
SMD11_RS08380	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS08380	SM01043	Bacterial transcriptional activator domain
SMD11_RS08395	SM00320	WD40 repeats
SMD11_RS08450	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS08480	SM00448	cheY-homologous receiver domain
SMD11_RS08480	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS08485	SM00387	Histidine kinase-like ATPases
SMD11_RS08485	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS08550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS08550	SM00387	Histidine kinase-like ATPases
SMD11_RS08550	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS08555	SM00448	cheY-homologous receiver domain
SMD11_RS08555	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS08590	SM00450	Rhodanese Homology Domain
SMD11_RS08615	SM00881	CoA binding domain
SMD11_RS08625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS08625	SM00895	SMD11_RS08625
SMD11_RS08645	SM00434	DNA Topoisomerase IV
SMD11_RS08650	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SMD11_RS08680	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08685	SM00091	PAS domain
SMD11_RS08685	SM00387	Histidine kinase-like ATPases
SMD11_RS08690	SM00448	cheY-homologous receiver domain
SMD11_RS08695	SM00387	Histidine kinase-like ATPases
SMD11_RS08695	SM00433	TopoisomeraseII
SMD11_RS08705	SM00020	Trypsin-like serine protease
SMD11_RS08715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS08715	SM00895	SMD11_RS08715
SMD11_RS08720	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08740	SM00487	DEAD-like helicases superfamily
SMD11_RS08740	SM00490	helicase superfamily c-terminal domain
SMD11_RS08765	SM00855	Phosphoglycerate mutase family
SMD11_RS08770	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08820	SM00487	DEAD-like helicases superfamily
SMD11_RS08820	SM00491	SMD11_RS08820
SMD11_RS08825	SM01006	Siderophore biosynthesis protein domain
SMD11_RS08855	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS08855	SM00954	Region found in RelA / SpoT proteins
SMD11_RS08890	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS08900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS08900	SM00387	Histidine kinase-like ATPases
SMD11_RS08900	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS08905	SM00448	cheY-homologous receiver domain
SMD11_RS08905	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS08910	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08915	SM00062	Bacterial periplasmic substrate-binding proteins
SMD11_RS08940	SM00450	Rhodanese Homology Domain
SMD11_RS08950	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08970	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS08970	SM00487	DEAD-like helicases superfamily
SMD11_RS08970	SM00490	helicase superfamily c-terminal domain
SMD11_RS08975	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SMD11_RS08975	SM01232	SMD11_RS08975
SMD11_RS08990	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS09005	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS09015	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09015	SM00843	SMD11_RS09015
SMD11_RS09020	SM00448	cheY-homologous receiver domain
SMD11_RS09025	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS09025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS09025	SM00387	Histidine kinase-like ATPases
SMD11_RS09025	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS09025	SM00448	cheY-homologous receiver domain
SMD11_RS09030	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS09030	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS09065	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS09070	SM01130	SMD11_RS09070
SMD11_RS09105	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS09105	SM00322	K homology RNA-binding domain
SMD11_RS09110	SM01387	SMD11_RS09110
SMD11_RS09120	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09150	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS09215	SM00904	Riboflavin kinase
SMD11_RS09250	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS09295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS09310	SM00829	Enoylreductase
SMD11_RS09335	SM00014	Acid phosphatase homologues
SMD11_RS09360	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09450	SM00344	helix_turn_helix ASNC type
SMD11_RS09460	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09480	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09545	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09615	SM00946	Prolyl-tRNA synthetase, C-terminal
SMD11_RS09625	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09625	SM00962	SRP54-type protein, GTPase domain
SMD11_RS09625	SM00963	SRP54-type protein, helical bundle domain
SMD11_RS09630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS09635	SM00938	Nitrogen regulatory protein P-II
SMD11_RS09650	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS09655	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS09655	SM00962	SRP54-type protein, GTPase domain
SMD11_RS09655	SM00963	SRP54-type protein, helical bundle domain
SMD11_RS09670	SM00968	SMC proteins Flexible Hinge Domain
SMD11_RS09690	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SMD11_RS09690	SM01232	SMD11_RS09690
SMD11_RS09695	SM00358	Double-stranded RNA binding motif
SMD11_RS09695	SM00535	Ribonuclease III family
SMD11_RS09730	SM00487	DEAD-like helicases superfamily
SMD11_RS09730	SM00490	helicase superfamily c-terminal domain
SMD11_RS09775	SM00563	Phosphate acyltransferases
SMD11_RS09790	SM00411	bacterial (prokaryotic) histone like domain
SMD11_RS09810	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS09820	SM00422	helix_turn_helix, mercury resistance
SMD11_RS09875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS09875	SM00387	Histidine kinase-like ATPases
SMD11_RS09880	SM00960	Roadblock/LC7 domain
SMD11_RS09895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS09895	SM00387	Histidine kinase-like ATPases
SMD11_RS09900	SM00960	Roadblock/LC7 domain
SMD11_RS09930	SM00867	YceI-like domain 
SMD11_RS09945	SM00917	LeuA allosteric (dimerisation) domain
SMD11_RS09960	SM01329	SMD11_RS09960
SMD11_RS10035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS10075	SM00052	Putative diguanylate phosphodiesterase
SMD11_RS10075	SM00091	PAS domain
SMD11_RS10075	SM00267	diguanylate cyclase
SMD11_RS10095	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS10120	SM00845	GatB domain
SMD11_RS10140	SM00052	Putative diguanylate phosphodiesterase
SMD11_RS10140	SM00267	diguanylate cyclase
SMD11_RS10145	SM00292	breast cancer carboxy-terminal domain
SMD11_RS10145	SM00532	Ligase N family
SMD11_RS10175	SM00487	DEAD-like helicases superfamily
SMD11_RS10185	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS10225	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS10245	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10250	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10325	SM00054	EF-hand, calcium binding motif
SMD11_RS10330	SM00644	SMD11_RS10330
SMD11_RS10350	SM00642	Alpha-amylase domain
SMD11_RS10355	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10360	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10380	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS10385	SM00642	Alpha-amylase domain
SMD11_RS10390	SM00642	Alpha-amylase domain
SMD11_RS10400	SM00642	Alpha-amylase domain
SMD11_RS10435	SM00387	Histidine kinase-like ATPases
SMD11_RS10440	SM00448	cheY-homologous receiver domain
SMD11_RS10475	SM01043	Bacterial transcriptional activator domain
SMD11_RS10485	SM00054	EF-hand, calcium binding motif
SMD11_RS10500	SM00458	Ricin-type beta-trefoil
SMD11_RS10510	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS10515	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10540	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS10610	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS10645	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS10690	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10705	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10765	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS10765	SM00448	cheY-homologous receiver domain
SMD11_RS10770	SM00060	Fibronectin type 3 domain
SMD11_RS10770	SM00636	SMD11_RS10770
SMD11_RS10770	SM00637	SMD11_RS10770
SMD11_RS10785	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10835	SM00226	Low molecular weight phosphatase family
SMD11_RS10850	SM00937	SMD11_RS10850
SMD11_RS10865	SM00357	Cold shock protein domain
SMD11_RS10865	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS10865	SM00959	Rho termination factor, N-terminal domain
SMD11_RS10890	SM00836	DALR anticodon binding domain
SMD11_RS10890	SM01016	Arginyl tRNA synthetase N terminal dom
SMD11_RS10895	SM00448	cheY-homologous receiver domain
SMD11_RS10960	SM00960	Roadblock/LC7 domain
SMD11_RS10965	SM00387	Histidine kinase-like ATPases
SMD11_RS10975	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS10980	SM00641	Glycosyl hydrolases family 25
SMD11_RS10995	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SMD11_RS11000	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS11005	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS11010	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11010	SM00464	Found in ATP-dependent protease La (LON)
SMD11_RS11015	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS11040	SM00448	cheY-homologous receiver domain
SMD11_RS11040	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS11045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS11045	SM00387	Histidine kinase-like ATPases
SMD11_RS11045	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS11050	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS11080	SM00829	Enoylreductase
SMD11_RS11090	SM00919	Malic enzyme, NAD binding domain
SMD11_RS11090	SM01274	SMD11_RS11090
SMD11_RS11095	SM00062	Bacterial periplasmic substrate-binding proteins
SMD11_RS11105	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS11165	SM00831	Cation transporter/ATPase, N-terminus
SMD11_RS11185	SM00098	Alkaline phosphatase homologues
SMD11_RS11205	SM00644	SMD11_RS11205
SMD11_RS11245	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SMD11_RS11255	SM00387	Histidine kinase-like ATPases
SMD11_RS11290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS11290	SM00866	SMD11_RS11290
SMD11_RS11310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS11385	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS11430	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11460	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS11465	SM01060	SMD11_RS11465
SMD11_RS11480	SM00028	Tetratricopeptide repeats
SMD11_RS11480	SM00671	Sel1-like repeats.
SMD11_RS11500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS11580	SM00341	Helicase and RNase D C-terminal
SMD11_RS11645	SM00450	Rhodanese Homology Domain
SMD11_RS11670	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11725	SM00487	DEAD-like helicases superfamily
SMD11_RS11725	SM00490	helicase superfamily c-terminal domain
SMD11_RS11755	SM00481	DNA polymerase alpha chain like domain
SMD11_RS11790	SM00924	MgtE intracellular N domain
SMD11_RS11820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS11905	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS11910	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS11910	SM00448	cheY-homologous receiver domain
SMD11_RS11925	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11975	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11980	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11985	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS11990	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS12010	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS12015	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS12070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS12070	SM00866	SMD11_RS12070
SMD11_RS12095	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS12095	SM00091	PAS domain
SMD11_RS12095	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS12175	SM00458	Ricin-type beta-trefoil
SMD11_RS12195	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS12200	SM01060	SMD11_RS12200
SMD11_RS12210	SM00244	prohibitin homologues
SMD11_RS12250	SM00670	Large family of predicted nucleotide-binding domains
SMD11_RS12355	SM00060	Fibronectin type 3 domain
SMD11_RS12355	SM00636	SMD11_RS12355
SMD11_RS12365	SM00631	SMD11_RS12365
SMD11_RS12380	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS12390	SM01119	SMD11_RS12390
SMD11_RS12460	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS12470	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS12525	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS12540	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS12565	SM00267	diguanylate cyclase
SMD11_RS12575	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SMD11_RS12605	SM00947	Carbonic anhydrase
SMD11_RS12630	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS12635	SM00878	Biotin carboxylase C-terminal domain
SMD11_RS12645	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS12645	SM01134	SMD11_RS12645
SMD11_RS12675	SM01133	SMD11_RS12675
SMD11_RS12710	SM00448	cheY-homologous receiver domain
SMD11_RS12710	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS12715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS12715	SM00387	Histidine kinase-like ATPases
SMD11_RS12715	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS12775	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS12785	SM01118	SMD11_RS12785
SMD11_RS12810	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SMD11_RS12830	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS12905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS12905	SM00895	SMD11_RS12905
SMD11_RS12950	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS13005	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS13015	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS13015	SM00448	cheY-homologous receiver domain
SMD11_RS13080	SM00422	helix_turn_helix, mercury resistance
SMD11_RS13135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS13160	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS13195	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS13200	SM01329	SMD11_RS13200
SMD11_RS13220	SM00798	AICARFT/IMPCHase bienzyme
SMD11_RS13220	SM00851	MGS-like domain
SMD11_RS13240	SM00881	CoA binding domain
SMD11_RS13310	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS13310	SM00448	cheY-homologous receiver domain
SMD11_RS13320	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS13340	SM01007	Class II Aldolase and Adducin N-terminal domain
SMD11_RS13355	SM00830	Chorismate mutase type II
SMD11_RS13375	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS13380	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS13395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS13395	SM00866	SMD11_RS13395
SMD11_RS13410	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS13410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS13420	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS13450	SM00866	SMD11_RS13450
SMD11_RS13510	SM00028	Tetratricopeptide repeats
SMD11_RS13520	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS13520	SM00448	cheY-homologous receiver domain
SMD11_RS13565	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS13580	SM00529	Helix-turn-helix diphteria tox regulatory element
SMD11_RS13580	SM00899	SMD11_RS13580
SMD11_RS13590	SM00091	PAS domain
SMD11_RS13625	SM00878	Biotin carboxylase C-terminal domain
SMD11_RS13655	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS13690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS13700	SM00825	Beta-ketoacyl synthase
SMD11_RS13760	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS13815	SM00357	Cold shock protein domain
SMD11_RS13840	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS13855	SM00487	DEAD-like helicases superfamily
SMD11_RS13855	SM00490	helicase superfamily c-terminal domain
SMD11_RS13910	SM00357	Cold shock protein domain
SMD11_RS13985	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS13985	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SMD11_RS13985	SM00091	PAS domain
SMD11_RS13985	SM00267	diguanylate cyclase
SMD11_RS13990	SM00903	Flavin reductase like domain
SMD11_RS14050	SM00387	Histidine kinase-like ATPases
SMD11_RS14055	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS14055	SM00448	cheY-homologous receiver domain
SMD11_RS14075	SM00829	Enoylreductase
SMD11_RS14100	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14120	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SMD11_RS14125	SM00840	SMD11_RS14125
SMD11_RS14155	SM01058	CarD-like/TRCF domain
SMD11_RS14170	SM00448	cheY-homologous receiver domain
SMD11_RS14170	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS14175	SM00387	Histidine kinase-like ATPases
SMD11_RS14175	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS14200	SM00855	Phosphoglycerate mutase family
SMD11_RS14245	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS14290	SM00448	cheY-homologous receiver domain
SMD11_RS14290	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS14295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS14295	SM00387	Histidine kinase-like ATPases
SMD11_RS14295	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS14305	SM01209	SMD11_RS14305
SMD11_RS14335	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS14365	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS14370	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS14380	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14385	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14405	SM00450	Rhodanese Homology Domain
SMD11_RS14435	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14505	SM00422	helix_turn_helix, mercury resistance
SMD11_RS14520	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS14535	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS14540	SM00506	Appr-1"-p processing enzyme
SMD11_RS14565	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14605	SM00014	Acid phosphatase homologues
SMD11_RS14620	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS14690	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS14690	SM00564	beta-propeller repeat
SMD11_RS14725	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14740	SM00014	Acid phosphatase homologues
SMD11_RS14750	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS14750	SM00448	cheY-homologous receiver domain
SMD11_RS14760	SM00478	endonuclease III
SMD11_RS14760	SM00525	SMD11_RS14760
SMD11_RS14775	SM00448	cheY-homologous receiver domain
SMD11_RS14775	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS14780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS14780	SM00387	Histidine kinase-like ATPases
SMD11_RS14780	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS14800	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14800	SM01086	C-terminal, D2-small domain, of ClpB protein
SMD11_RS14865	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS14870	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS14870	SM00448	cheY-homologous receiver domain
SMD11_RS14910	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS14925	SM00905	Dihydroneopterin aldolase
SMD11_RS14955	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS15020	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS15040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SMD11_RS15070	SM00482	DNA polymerase A domain
SMD11_RS15120	SM00824	Thioesterase
SMD11_RS15165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS15175	SM00267	diguanylate cyclase
SMD11_RS15230	SM00942	Primase C terminal 1 (PriCT-1)
SMD11_RS15230	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS15275	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SMD11_RS15275	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SMD11_RS15275	SM00493	SMD11_RS15275
SMD11_RS15305	SM00487	DEAD-like helicases superfamily
SMD11_RS15305	SM00490	helicase superfamily c-terminal domain
SMD11_RS15365	SM00947	Carbonic anhydrase
SMD11_RS15410	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS15410	SM00419	helix_turn_helix, cAMP Regulatory protein
SMD11_RS15425	SM00644	SMD11_RS15425
SMD11_RS15510	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS15610	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SMD11_RS15625	SM00493	SMD11_RS15625
SMD11_RS15635	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS15670	SM00487	DEAD-like helicases superfamily
SMD11_RS15670	SM00490	helicase superfamily c-terminal domain
SMD11_RS15685	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS15720	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS15720	SM00387	Histidine kinase-like ATPases
SMD11_RS15725	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS15725	SM00448	cheY-homologous receiver domain
SMD11_RS15745	SM00829	Enoylreductase
SMD11_RS15770	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS15785	SM00873	B3/4 domain
SMD11_RS15790	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS15850	SM01209	SMD11_RS15850
SMD11_RS15885	SM01236	SMD11_RS15885
SMD11_RS15900	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS15910	SM00829	Enoylreductase
SMD11_RS15930	SM00998	Adenylosuccinate lyase C-terminus
SMD11_RS15940	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SMD11_RS15980	SM00822	SMD11_RS15980
SMD11_RS16020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS16040	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS16070	SM00886	Stress responsive A/B Barrel Domain
SMD11_RS16095	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS16115	SM00448	cheY-homologous receiver domain
SMD11_RS16115	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS16145	SM00091	PAS domain
SMD11_RS16145	SM00448	cheY-homologous receiver domain
SMD11_RS16160	SM01060	SMD11_RS16160
SMD11_RS16165	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS16255	SM00650	Ribosomal RNA adenine dimethylases
SMD11_RS16265	SM00091	PAS domain
SMD11_RS16265	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS16270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS16295	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS16300	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS16305	SM01011	Aminopeptidase P, N-terminal domain
SMD11_RS16315	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS16315	SM00448	cheY-homologous receiver domain
SMD11_RS16360	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS16360	SM00448	cheY-homologous receiver domain
SMD11_RS16375	SM00822	SMD11_RS16375
SMD11_RS16390	SM00825	Beta-ketoacyl synthase
SMD11_RS16465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS16465	SM00895	SMD11_RS16465
SMD11_RS16485	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS16495	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS16505	SM00822	SMD11_RS16505
SMD11_RS16545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS16545	SM00387	Histidine kinase-like ATPases
SMD11_RS16550	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS16570	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS16585	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS16605	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS16685	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS16705	SM00422	helix_turn_helix, mercury resistance
SMD11_RS16715	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS16745	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS16820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS16865	SM00470	ParB-like nuclease domain
SMD11_RS16880	SM00393	Putative single-stranded nucleic acids-binding domain
SMD11_RS16890	SM01234	SMD11_RS16890
SMD11_RS16905	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS16905	SM00760	Bacterial dnaA protein helix-turn-helix domain
SMD11_RS16915	SM00480	DNA polymerase III beta subunit
SMD11_RS16920	SM01350	SMD11_RS16920
SMD11_RS16935	SM00387	Histidine kinase-like ATPases
SMD11_RS16935	SM00433	TopoisomeraseII
SMD11_RS16940	SM00434	DNA Topoisomerase IV
SMD11_RS16965	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS17030	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS17030	SM00740	SMD11_RS17030
SMD11_RS17050	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS17050	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SMD11_RS17055	SM00240	Forkhead associated domain
SMD11_RS17060	SM00240	Forkhead associated domain
SMD11_RS17075	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS17080	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS17100	SM00450	Rhodanese Homology Domain
SMD11_RS17140	SM00752	Horizontally Transferred TransMembrane Domain
SMD11_RS17165	SM00344	helix_turn_helix ASNC type
SMD11_RS17175	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS17190	SM00852	Probable molybdopterin binding domain
SMD11_RS17200	SM00829	Enoylreductase
SMD11_RS17215	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS17215	SM00740	SMD11_RS17215
SMD11_RS17220	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS17235	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS17235	SM00448	cheY-homologous receiver domain
SMD11_RS17245	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS17255	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS17260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS17260	SM00895	SMD11_RS17260
SMD11_RS17325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS17325	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS17360	SM00448	cheY-homologous receiver domain
SMD11_RS17360	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS17370	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS17430	SM00822	SMD11_RS17430
SMD11_RS17445	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS17540	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS17550	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS17605	SM00271	DnaJ molecular chaperone homology domain
SMD11_RS17610	SM00422	helix_turn_helix, mercury resistance
SMD11_RS17630	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS17655	SM00422	helix_turn_helix, mercury resistance
SMD11_RS17680	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS17680	SM01086	C-terminal, D2-small domain, of ClpB protein
SMD11_RS17710	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS17775	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS17775	SM00448	cheY-homologous receiver domain
SMD11_RS17785	SM00788	Adenylosuccinate synthetase
SMD11_RS17795	SM00357	Cold shock protein domain
SMD11_RS17805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS17825	SM01209	SMD11_RS17825
SMD11_RS17825	SM01210	SMD11_RS17825
SMD11_RS17855	SM00448	cheY-homologous receiver domain
SMD11_RS17855	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS17860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS17860	SM00387	Histidine kinase-like ATPases
SMD11_RS17860	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS17870	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS17870	SM00448	cheY-homologous receiver domain
SMD11_RS17885	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS17920	SM01211	SMD11_RS17920
SMD11_RS17950	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SMD11_RS17975	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS17975	SM00487	DEAD-like helicases superfamily
SMD11_RS17975	SM00490	helicase superfamily c-terminal domain
SMD11_RS17975	SM00847	Helicase associated domain (HA2)  Add an annotation
SMD11_RS18005	SM00487	DEAD-like helicases superfamily
SMD11_RS18005	SM00490	helicase superfamily c-terminal domain
SMD11_RS18020	SM00357	Cold shock protein domain
SMD11_RS18025	SM00487	DEAD-like helicases superfamily
SMD11_RS18025	SM00490	helicase superfamily c-terminal domain
SMD11_RS18030	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS18055	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS18085	SM00487	DEAD-like helicases superfamily
SMD11_RS18125	SM00776	SMD11_RS18125
SMD11_RS18140	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS18150	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS18240	SM01155	SMD11_RS18240
SMD11_RS18250	SM00563	Phosphate acyltransferases
SMD11_RS18275	SM00881	CoA binding domain
SMD11_RS18295	SM01004	Delta-aminolevulinic acid dehydratase
SMD11_RS18305	SM00836	DALR anticodon binding domain
SMD11_RS18305	SM01016	Arginyl tRNA synthetase N terminal dom
SMD11_RS18335	SM00822	SMD11_RS18335
SMD11_RS18350	SM01012	SMD11_RS18350
SMD11_RS18355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS18355	SM01012	SMD11_RS18355
SMD11_RS18370	SM00855	Phosphoglycerate mutase family
SMD11_RS18435	SM00344	helix_turn_helix ASNC type
SMD11_RS18470	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS18480	SM00357	Cold shock protein domain
SMD11_RS18495	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS18500	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS18560	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SMD11_RS18565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SMD11_RS18565	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SMD11_RS18640	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS18670	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS18670	SM00448	cheY-homologous receiver domain
SMD11_RS18815	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SMD11_RS18815	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SMD11_RS18820	SM00649	Ribosomal protein L11/L12
SMD11_RS18850	SM00663	RNA polymerase I subunit A N-terminus
SMD11_RS18865	SM00838	Elongation factor G C-terminus
SMD11_RS18865	SM00889	Elongation factor G, domain IV
SMD11_RS18880	SM01403	SMD11_RS18880
SMD11_RS18900	SM01382	SMD11_RS18900
SMD11_RS18900	SM01383	SMD11_RS18900
SMD11_RS18915	SM00322	K homology RNA-binding domain
SMD11_RS18935	SM01374	SMD11_RS18935
SMD11_RS18940	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SMD11_RS19005	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS19025	SM00662	RNA polymerases D
SMD11_RS19060	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS19115	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19130	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19145	SM00422	helix_turn_helix, mercury resistance
SMD11_RS19160	SM01005	Alanine racemase, C-terminal domain
SMD11_RS19220	SM00883	Chaperonin 10 Kd subunit
SMD11_RS19230	SM00822	SMD11_RS19230
SMD11_RS19250	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS19250	SM00448	cheY-homologous receiver domain
SMD11_RS19260	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS19260	SM01240	SMD11_RS19260
SMD11_RS19265	SM01240	SMD11_RS19265
SMD11_RS19280	SM00984	UDP binding domain
SMD11_RS19295	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19300	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19335	SM00822	SMD11_RS19335
SMD11_RS19350	SM00829	Enoylreductase
SMD11_RS19355	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS19370	SM00903	Flavin reductase like domain
SMD11_RS19380	SM00881	CoA binding domain
SMD11_RS19410	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19410	SM00564	beta-propeller repeat
SMD11_RS19445	SM00028	Tetratricopeptide repeats
SMD11_RS19445	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS19445	SM01043	Bacterial transcriptional activator domain
SMD11_RS19495	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19510	SM00481	DNA polymerase alpha chain like domain
SMD11_RS19520	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19520	SM00320	WD40 repeats
SMD11_RS19525	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19525	SM00320	WD40 repeats
SMD11_RS19530	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS19550	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19575	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS19585	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS19610	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS19620	SM00341	Helicase and RNase D C-terminal
SMD11_RS19620	SM00487	DEAD-like helicases superfamily
SMD11_RS19620	SM00490	helicase superfamily c-terminal domain
SMD11_RS19620	SM00956	SMD11_RS19620
SMD11_RS19675	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS19710	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS19710	SM01134	SMD11_RS19710
SMD11_RS19745	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS19780	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS19825	SM00834	Putative regulatory protein
SMD11_RS19855	SM00852	Probable molybdopterin binding domain
SMD11_RS19865	SM00852	Probable molybdopterin binding domain
SMD11_RS19890	SM00344	helix_turn_helix ASNC type
SMD11_RS19905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS19905	SM00387	Histidine kinase-like ATPases
SMD11_RS19905	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS19935	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS19950	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS19965	SM00422	helix_turn_helix, mercury resistance
SMD11_RS19975	SM00822	SMD11_RS19975
SMD11_RS19985	SM00245	tail specific protease
SMD11_RS20025	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20070	SM01208	SMD11_RS20070
SMD11_RS20075	SM00650	Ribosomal RNA adenine dimethylases
SMD11_RS20100	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20130	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS20130	SM00448	cheY-homologous receiver domain
SMD11_RS20135	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS20170	SM01400	SMD11_RS20170
SMD11_RS20200	SM00860	SMI1 / KNR4 family
SMD11_RS20220	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20230	SM00487	DEAD-like helicases superfamily
SMD11_RS20230	SM00490	helicase superfamily c-terminal domain
SMD11_RS20230	SM00982	SMD11_RS20230
SMD11_RS20230	SM01058	CarD-like/TRCF domain
SMD11_RS20255	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS20285	SM00257	Lysin motif
SMD11_RS20290	SM00257	Lysin motif
SMD11_RS20295	SM01192	SMD11_RS20295
SMD11_RS20295	SM01193	SMD11_RS20295
SMD11_RS20320	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
SMD11_RS20330	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20340	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS20345	SM00822	SMD11_RS20345
SMD11_RS20345	SM00825	Beta-ketoacyl synthase
SMD11_RS20355	SM00822	SMD11_RS20355
SMD11_RS20405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS20415	SM00823	Phosphopantetheine attachment site
SMD11_RS20415	SM00825	Beta-ketoacyl synthase
SMD11_RS20415	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS20420	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS20465	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS20525	SM00422	helix_turn_helix, mercury resistance
SMD11_RS20565	SM00448	cheY-homologous receiver domain
SMD11_RS20565	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS20570	SM00387	Histidine kinase-like ATPases
SMD11_RS20570	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS20585	SM01001	AIR carboxylase
SMD11_RS20600	SM00984	UDP binding domain
SMD11_RS20655	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
SMD11_RS20745	SM00996	S-adenosyl-L-homocysteine hydrolase
SMD11_RS20745	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SMD11_RS20780	SM00448	cheY-homologous receiver domain
SMD11_RS20780	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS20785	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS20785	SM00387	Histidine kinase-like ATPases
SMD11_RS20785	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS20790	SM00909	Sporulation and spore germination
SMD11_RS20805	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS20805	SM00448	cheY-homologous receiver domain
SMD11_RS20820	SM00957	SecA DEAD-like domain
SMD11_RS20820	SM00958	SecA preprotein cross-linking domain
SMD11_RS20910	SM00240	Forkhead associated domain
SMD11_RS20910	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20915	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS20920	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS20925	SM00937	SMD11_RS20925
SMD11_RS20940	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS20950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS20950	SM00245	tail specific protease
SMD11_RS21000	SM00919	Malic enzyme, NAD binding domain
SMD11_RS21000	SM01274	SMD11_RS21000
SMD11_RS21010	SM00411	bacterial (prokaryotic) histone like domain
SMD11_RS21060	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SMD11_RS21115	SM00487	DEAD-like helicases superfamily
SMD11_RS21120	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS21140	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21150	SM00344	helix_turn_helix ASNC type
SMD11_RS21220	SM00232	JAB/MPN domain
SMD11_RS21235	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS21295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS21295	SM00387	Histidine kinase-like ATPases
SMD11_RS21295	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS21310	SM00883	Chaperonin 10 Kd subunit
SMD11_RS21335	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21350	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS21350	SM00448	cheY-homologous receiver domain
SMD11_RS21445	SM00422	helix_turn_helix, mercury resistance
SMD11_RS21470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS21470	SM00866	SMD11_RS21470
SMD11_RS21485	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21565	SM00052	Putative diguanylate phosphodiesterase
SMD11_RS21565	SM00267	diguanylate cyclase
SMD11_RS21640	SM00855	Phosphoglycerate mutase family
SMD11_RS21685	SM00479	SMD11_RS21685
SMD11_RS21690	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS21735	SM00878	Biotin carboxylase C-terminal domain
SMD11_RS21785	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21825	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21970	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS21985	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS22025	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS22050	SM00240	Forkhead associated domain
SMD11_RS22055	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS22060	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS22060	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SMD11_RS22065	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS22075	SM00062	Bacterial periplasmic substrate-binding proteins
SMD11_RS22135	SM00507	HNH nucleases
SMD11_RS22160	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS22185	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SMD11_RS22245	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS22260	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SMD11_RS22260	SM01232	SMD11_RS22260
SMD11_RS22270	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS22315	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS22315	SM00994	ClpX C4-type zinc finger
SMD11_RS22315	SM01086	C-terminal, D2-small domain, of ClpB protein
SMD11_RS22370	SM00448	cheY-homologous receiver domain
SMD11_RS22370	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS22375	SM00387	Histidine kinase-like ATPases
SMD11_RS22375	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS22395	SM00562	SMD11_RS22395
SMD11_RS22425	SM00880	SMD11_RS22425
SMD11_RS22425	SM01118	SMD11_RS22425
SMD11_RS22430	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS22440	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS22465	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SMD11_RS22515	SM00855	Phosphoglycerate mutase family
SMD11_RS22540	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SMD11_RS22595	SM00838	Elongation factor G C-terminus
SMD11_RS22605	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS22615	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS22625	SM00271	DnaJ molecular chaperone homology domain
SMD11_RS22640	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS22680	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS22735	SM00028	Tetratricopeptide repeats
SMD11_RS22775	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS22775	SM01091	Transporter associated domain
SMD11_RS22785	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS22815	SM00917	LeuA allosteric (dimerisation) domain
SMD11_RS22830	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS22845	SM00829	Enoylreductase
SMD11_RS22880	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS22895	SM00387	Histidine kinase-like ATPases
SMD11_RS22900	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS22900	SM00448	cheY-homologous receiver domain
SMD11_RS22925	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS22945	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS23015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SMD11_RS23030	SM00400	zinc finger
SMD11_RS23030	SM00493	SMD11_RS23030
SMD11_RS23030	SM00766	DNA primase DnaG DnaB-binding
SMD11_RS23070	SM00855	Phosphoglycerate mutase family
SMD11_RS23090	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23105	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS23110	SM00829	Enoylreductase
SMD11_RS23185	SM00825	Beta-ketoacyl synthase
SMD11_RS23200	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS23220	SM00422	helix_turn_helix, mercury resistance
SMD11_RS23230	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS23230	SM00448	cheY-homologous receiver domain
SMD11_RS23325	SM00834	Putative regulatory protein
SMD11_RS23390	SM00866	SMD11_RS23390
SMD11_RS23470	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23490	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS23505	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS23505	SM01260	SMD11_RS23505
SMD11_RS23515	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23520	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23525	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS23525	SM00448	cheY-homologous receiver domain
SMD11_RS23570	SM00646	SMD11_RS23570
SMD11_RS23580	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS23580	SM00448	cheY-homologous receiver domain
SMD11_RS23595	SM00829	Enoylreductase
SMD11_RS23600	SM00822	SMD11_RS23600
SMD11_RS23625	SM00855	Phosphoglycerate mutase family
SMD11_RS23645	SM00955	SMD11_RS23645
SMD11_RS23680	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23705	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS23780	SM00028	Tetratricopeptide repeats
SMD11_RS23780	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS23780	SM01043	Bacterial transcriptional activator domain
SMD11_RS23790	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS23830	SM00020	Trypsin-like serine protease
SMD11_RS23865	SM01230	SMD11_RS23865
SMD11_RS23880	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS23885	SM00642	Alpha-amylase domain
SMD11_RS23905	SM00632	SMD11_RS23905
SMD11_RS23905	SM00642	Alpha-amylase domain
SMD11_RS23940	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS23940	SM00448	cheY-homologous receiver domain
SMD11_RS23945	SM00387	Histidine kinase-like ATPases
SMD11_RS23950	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS23970	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS24010	SM01230	SMD11_RS24010
SMD11_RS24030	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS24070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS24070	SM00895	SMD11_RS24070
SMD11_RS24125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SMD11_RS24150	SM00387	Histidine kinase-like ATPases
SMD11_RS24155	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS24155	SM00448	cheY-homologous receiver domain
SMD11_RS24335	SM00563	Phosphate acyltransferases
SMD11_RS24340	SM00387	Histidine kinase-like ATPases
SMD11_RS24345	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS24345	SM00448	cheY-homologous receiver domain
SMD11_RS24380	SM00518	AP endonuclease family 2
SMD11_RS24385	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS24385	SM00740	SMD11_RS24385
SMD11_RS24470	SM00947	Carbonic anhydrase
SMD11_RS24530	SM00864	Tubulin/FtsZ family, GTPase domain
SMD11_RS24530	SM00865	Tubulin/FtsZ family, C-terminal domain
SMD11_RS24635	SM00481	DNA polymerase alpha chain like domain
SMD11_RS24645	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS24665	SM00464	Found in ATP-dependent protease La (LON)
SMD11_RS24825	SM00020	Trypsin-like serine protease
SMD11_RS24835	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS24835	SM00448	cheY-homologous receiver domain
SMD11_RS24855	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS24860	SM00830	Chorismate mutase type II
SMD11_RS24910	SM00448	cheY-homologous receiver domain
SMD11_RS24910	SM01012	SMD11_RS24910
SMD11_RS24915	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS24920	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS24950	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SMD11_RS24950	SM00474	3'-5' exonuclease
SMD11_RS24950	SM00475	5'-3' exonuclease
SMD11_RS24950	SM00482	DNA polymerase A domain
SMD11_RS24965	SM00487	DEAD-like helicases superfamily
SMD11_RS24965	SM00490	helicase superfamily c-terminal domain
SMD11_RS24965	SM00847	Helicase associated domain (HA2)  Add an annotation
SMD11_RS24975	SM00316	Ribosomal protein S1-like RNA-binding domain
SMD11_RS25030	SM00487	DEAD-like helicases superfamily
SMD11_RS25030	SM00490	helicase superfamily c-terminal domain
SMD11_RS25055	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS25095	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SMD11_RS25095	SM00465	GIY-YIG type nucleases (URI domain)
SMD11_RS25115	SM00631	SMD11_RS25115
SMD11_RS25120	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SMD11_RS25170	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS25200	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25225	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25265	SM01130	SMD11_RS25265
SMD11_RS25300	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS25300	SM00448	cheY-homologous receiver domain
SMD11_RS25380	SM00327	von Willebrand factor (vWF) type A domain
SMD11_RS25380	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25405	SM01007	Class II Aldolase and Adducin N-terminal domain
SMD11_RS25430	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25495	SM00479	SMD11_RS25495
SMD11_RS25530	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS25565	SM00822	SMD11_RS25565
SMD11_RS25590	SM00855	Phosphoglycerate mutase family
SMD11_RS25605	SM00240	Forkhead associated domain
SMD11_RS25605	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS25620	SM00387	Histidine kinase-like ATPases
SMD11_RS25625	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS25625	SM00448	cheY-homologous receiver domain
SMD11_RS25645	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25655	SM00244	prohibitin homologues
SMD11_RS25665	SM00507	HNH nucleases
SMD11_RS25745	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25760	SM00363	S4 RNA-binding domain
SMD11_RS25805	SM00028	Tetratricopeptide repeats
SMD11_RS25810	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SMD11_RS25810	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SMD11_RS25835	SM00363	S4 RNA-binding domain
SMD11_RS25865	SM00563	Phosphate acyltransferases
SMD11_RS25870	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS25945	SM00014	Acid phosphatase homologues
SMD11_RS26000	SM00244	prohibitin homologues
SMD11_RS26030	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26070	SM00344	helix_turn_helix ASNC type
SMD11_RS26105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS26110	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26155	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS26170	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS26185	SM00866	SMD11_RS26185
SMD11_RS26200	SM00829	Enoylreductase
SMD11_RS26215	SM00422	helix_turn_helix, mercury resistance
SMD11_RS26265	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS26270	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS26280	SM00829	Enoylreductase
SMD11_RS26365	SM00855	Phosphoglycerate mutase family
SMD11_RS26390	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS26410	SM01018	B12 binding domain
SMD11_RS26415	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS26470	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS26470	SM00448	cheY-homologous receiver domain
SMD11_RS26505	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26535	SM00354	helix_turn _helix lactose operon repressor
SMD11_RS26590	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SMD11_RS26595	SM00487	DEAD-like helicases superfamily
SMD11_RS26595	SM00490	helicase superfamily c-terminal domain
SMD11_RS26595	SM01142	SMD11_RS26595
SMD11_RS26610	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SMD11_RS26610	SM00475	5'-3' exonuclease
SMD11_RS26615	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS26650	SM00895	SMD11_RS26650
SMD11_RS26655	SM01230	SMD11_RS26655
SMD11_RS26720	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SMD11_RS26725	SM00387	Histidine kinase-like ATPases
SMD11_RS26725	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS26735	SM00873	B3/4 domain
SMD11_RS26735	SM00874	tRNA synthetase B5 domain
SMD11_RS26735	SM00896	Ferredoxin-fold anticodon binding domain
SMD11_RS26740	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS26775	SM00363	S4 RNA-binding domain
SMD11_RS26790	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS26800	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SMD11_RS26860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS26900	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS26935	SM00563	Phosphate acyltransferases
SMD11_RS26965	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS26965	SM00930	SMD11_RS26965
SMD11_RS27005	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS27115	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SMD11_RS27140	SM00838	Elongation factor G C-terminus
SMD11_RS27140	SM00889	Elongation factor G, domain IV
SMD11_RS27185	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SMD11_RS27190	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS27195	SM01323	SMD11_RS27195
SMD11_RS27230	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS27240	SM00756	SMD11_RS27240
SMD11_RS27245	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS27255	SM00363	S4 RNA-binding domain
SMD11_RS27255	SM01390	SMD11_RS27255
SMD11_RS27275	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SMD11_RS27280	SM00732	Likely ribonuclease with RNase H fold.
SMD11_RS27300	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS27325	SM00841	Elongation factor P, C-terminal
SMD11_RS27325	SM01185	SMD11_RS27325
SMD11_RS27335	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS27360	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SMD11_RS27365	SM00851	MGS-like domain
SMD11_RS27365	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SMD11_RS27375	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SMD11_RS27385	SM00072	Guanylate kinase homologues.
SMD11_RS27390	SM01409	SMD11_RS27390
SMD11_RS27435	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS27435	SM01240	SMD11_RS27435
SMD11_RS27445	SM00344	helix_turn_helix ASNC type
SMD11_RS27490	SM00495	Chitin-binding domain type 3
SMD11_RS27490	SM00636	SMD11_RS27490
SMD11_RS27535	SM01091	Transporter associated domain
SMD11_RS27540	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS27545	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS27565	SM00052	Putative diguanylate phosphodiesterase
SMD11_RS27565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SMD11_RS27565	SM00091	PAS domain
SMD11_RS27565	SM00267	diguanylate cyclase
SMD11_RS27575	SM00267	diguanylate cyclase
SMD11_RS27615	SM00091	PAS domain
SMD11_RS27615	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS27635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS27685	SM00267	diguanylate cyclase
SMD11_RS27705	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SMD11_RS27735	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS27785	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS27805	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS27810	SM01120	SMD11_RS27810
SMD11_RS27835	SM00636	SMD11_RS27835
SMD11_RS27850	SM00344	helix_turn_helix ASNC type
SMD11_RS27885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS27900	SM00248	ankyrin repeats
SMD11_RS27940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS27940	SM00387	Histidine kinase-like ATPases
SMD11_RS27940	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS27945	SM00448	cheY-homologous receiver domain
SMD11_RS27945	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS27995	SM00797	Allophanate hydrolase subunit 2
SMD11_RS28000	SM00796	Allophanate hydrolase subunit 1
SMD11_RS28010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS28010	SM00895	SMD11_RS28010
SMD11_RS28060	SM00387	Histidine kinase-like ATPases
SMD11_RS28065	SM00960	Roadblock/LC7 domain
SMD11_RS28100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS28170	SM00240	Forkhead associated domain
SMD11_RS28175	SM00422	helix_turn_helix, mercury resistance
SMD11_RS28185	SM00422	helix_turn_helix, mercury resistance
SMD11_RS28275	SM00822	SMD11_RS28275
SMD11_RS28285	SM00986	Uracil DNA glycosylase superfamily
SMD11_RS28285	SM00987	UreE urease accessory protein, C-terminal domain 
SMD11_RS28335	SM00960	Roadblock/LC7 domain
SMD11_RS28350	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
SMD11_RS28365	SM00481	DNA polymerase alpha chain like domain
SMD11_RS28380	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS28380	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS28510	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS28520	SM00823	Phosphopantetheine attachment site
SMD11_RS28520	SM00825	Beta-ketoacyl synthase
SMD11_RS28520	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS28525	SM00823	Phosphopantetheine attachment site
SMD11_RS28525	SM01294	SMD11_RS28525
SMD11_RS28540	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS28560	SM01209	SMD11_RS28560
SMD11_RS28625	SM00344	helix_turn_helix ASNC type
SMD11_RS28630	SM00450	Rhodanese Homology Domain
SMD11_RS28695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS28695	SM00866	SMD11_RS28695
SMD11_RS28705	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS28705	SM00448	cheY-homologous receiver domain
SMD11_RS28715	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS28725	SM00986	Uracil DNA glycosylase superfamily
SMD11_RS28725	SM00987	UreE urease accessory protein, C-terminal domain 
SMD11_RS28735	SM00998	Adenylosuccinate lyase C-terminus
SMD11_RS28745	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS28750	SM01091	Transporter associated domain
SMD11_RS28775	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS28775	SM00876	Biotin and Thiamin Synthesis associated domain
SMD11_RS28790	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS28895	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS28900	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS28905	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS28920	SM00824	Thioesterase
SMD11_RS28965	SM00155	Phospholipase D. Active site motifs.
SMD11_RS28980	SM00014	Acid phosphatase homologues
SMD11_RS28990	SM00422	helix_turn_helix, mercury resistance
SMD11_RS29025	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS29060	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS29060	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS29060	SM01043	Bacterial transcriptional activator domain
SMD11_RS29065	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS29070	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS29150	SM00644	SMD11_RS29150
SMD11_RS29165	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SMD11_RS29165	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS29255	SM00387	Histidine kinase-like ATPases
SMD11_RS29270	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS29270	SM00448	cheY-homologous receiver domain
SMD11_RS29330	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SMD11_RS29335	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS29360	SM00822	SMD11_RS29360
SMD11_RS29375	SM00825	Beta-ketoacyl synthase
SMD11_RS29420	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS29425	SM00829	Enoylreductase
SMD11_RS29445	SM00357	Cold shock protein domain
SMD11_RS29500	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SMD11_RS29505	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SMD11_RS29555	SM00422	helix_turn_helix, mercury resistance
SMD11_RS29680	SM01230	SMD11_RS29680
SMD11_RS29695	SM00116	Domain in cystathionine beta-synthase and other proteins.
SMD11_RS29705	SM00822	SMD11_RS29705
SMD11_RS29705	SM00823	Phosphopantetheine attachment site
SMD11_RS29705	SM00825	Beta-ketoacyl synthase
SMD11_RS29705	SM00826	SMD11_RS29705
SMD11_RS29705	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS29705	SM00829	Enoylreductase
SMD11_RS29725	SM00822	SMD11_RS29725
SMD11_RS29735	SM00387	Histidine kinase-like ATPases
SMD11_RS29750	SM00387	Histidine kinase-like ATPases
SMD11_RS29760	SM00448	cheY-homologous receiver domain
SMD11_RS29760	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS29765	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS29770	SM00878	Biotin carboxylase C-terminal domain
SMD11_RS29800	SM00825	Beta-ketoacyl synthase
SMD11_RS29805	SM00825	Beta-ketoacyl synthase
SMD11_RS29835	SM00823	Phosphopantetheine attachment site
SMD11_RS29875	SM00947	Carbonic anhydrase
SMD11_RS29890	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS29950	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS29950	SM01043	Bacterial transcriptional activator domain
SMD11_RS29955	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS29970	SM00822	SMD11_RS29970
SMD11_RS29970	SM00823	Phosphopantetheine attachment site
SMD11_RS29970	SM00825	Beta-ketoacyl synthase
SMD11_RS29970	SM00826	SMD11_RS29970
SMD11_RS29970	SM01294	SMD11_RS29970
SMD11_RS29975	SM00822	SMD11_RS29975
SMD11_RS29975	SM00823	Phosphopantetheine attachment site
SMD11_RS29975	SM00825	Beta-ketoacyl synthase
SMD11_RS29975	SM00826	SMD11_RS29975
SMD11_RS29975	SM01294	SMD11_RS29975
SMD11_RS29980	SM00823	Phosphopantetheine attachment site
SMD11_RS29990	SM00923	MbtH-like protein
SMD11_RS30025	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS30045	SM00245	tail specific protease
SMD11_RS30050	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS30055	SM01119	SMD11_RS30055
SMD11_RS30085	SM00458	Ricin-type beta-trefoil
SMD11_RS30090	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS30090	SM01043	Bacterial transcriptional activator domain
SMD11_RS30110	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS30110	SM00448	cheY-homologous receiver domain
SMD11_RS30150	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS30160	SM00822	SMD11_RS30160
SMD11_RS30170	SM00823	Phosphopantetheine attachment site
SMD11_RS30170	SM00824	Thioesterase
SMD11_RS30195	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SMD11_RS30210	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS30240	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS30295	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS30445	SM00458	Ricin-type beta-trefoil
SMD11_RS30450	SM00458	Ricin-type beta-trefoil
SMD11_RS30470	SM00822	SMD11_RS30470
SMD11_RS30470	SM00823	Phosphopantetheine attachment site
SMD11_RS30470	SM00825	Beta-ketoacyl synthase
SMD11_RS30470	SM00826	SMD11_RS30470
SMD11_RS30470	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS30470	SM00829	Enoylreductase
SMD11_RS30470	SM01294	SMD11_RS30470
SMD11_RS30480	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS30555	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS30665	SM00822	SMD11_RS30665
SMD11_RS30705	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS30710	SM00631	SMD11_RS30710
SMD11_RS30715	SM00710	Parallel beta-helix repeats
SMD11_RS30740	SM00448	cheY-homologous receiver domain
SMD11_RS30740	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS30745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS30745	SM00387	Histidine kinase-like ATPases
SMD11_RS30745	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS30805	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS30855	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS30885	SM00637	SMD11_RS30885
SMD11_RS30890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS30890	SM00387	Histidine kinase-like ATPases
SMD11_RS30890	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS30895	SM00448	cheY-homologous receiver domain
SMD11_RS30895	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS30930	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS30935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS30935	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS30975	SM00357	Cold shock protein domain
SMD11_RS30980	SM00487	DEAD-like helicases superfamily
SMD11_RS30980	SM00490	helicase superfamily c-terminal domain
SMD11_RS31105	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS31110	SM00636	SMD11_RS31110
SMD11_RS31125	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS31135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SMD11_RS31205	SM00823	Phosphopantetheine attachment site
SMD11_RS31230	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31285	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31385	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS31440	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31445	SM00320	WD40 repeats
SMD11_RS31485	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31495	SM00960	Roadblock/LC7 domain
SMD11_RS31555	SM00823	Phosphopantetheine attachment site
SMD11_RS31555	SM00825	Beta-ketoacyl synthase
SMD11_RS31555	SM00826	SMD11_RS31555
SMD11_RS31555	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS31555	SM01294	SMD11_RS31555
SMD11_RS31600	SM00422	helix_turn_helix, mercury resistance
SMD11_RS31600	SM00480	DNA polymerase III beta subunit
SMD11_RS31620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS31620	SM00387	Histidine kinase-like ATPases
SMD11_RS31620	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS31700	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS31700	SM01260	SMD11_RS31700
SMD11_RS31705	SM01260	SMD11_RS31705
SMD11_RS31730	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31755	SM00984	UDP binding domain
SMD11_RS31790	SM00829	Enoylreductase
SMD11_RS31795	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS31815	SM00240	Forkhead associated domain
SMD11_RS31815	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS31825	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS31870	SM00100	Cyclic nucleotide-monophosphate binding domain
SMD11_RS31885	SM00849	Metallo-beta-lactamase superfamily
SMD11_RS31890	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS31895	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS31930	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS32070	SM00344	helix_turn_helix ASNC type
SMD11_RS32110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS32110	SM00091	PAS domain
SMD11_RS32110	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS32120	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS32120	SM00448	cheY-homologous receiver domain
SMD11_RS32130	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS32150	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SMD11_RS32215	SM00458	Ricin-type beta-trefoil
SMD11_RS32230	SM00823	Phosphopantetheine attachment site
SMD11_RS32230	SM00824	Thioesterase
SMD11_RS32280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SMD11_RS32280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS32280	SM00387	Histidine kinase-like ATPases
SMD11_RS32280	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS32280	SM00448	cheY-homologous receiver domain
SMD11_RS32285	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS32285	SM01012	SMD11_RS32285
SMD11_RS32300	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SMD11_RS32315	SM00822	SMD11_RS32315
SMD11_RS32315	SM00823	Phosphopantetheine attachment site
SMD11_RS32315	SM00825	Beta-ketoacyl synthase
SMD11_RS32315	SM00826	SMD11_RS32315
SMD11_RS32315	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS32315	SM01294	SMD11_RS32315
SMD11_RS32320	SM00822	SMD11_RS32320
SMD11_RS32320	SM00823	Phosphopantetheine attachment site
SMD11_RS32320	SM00825	Beta-ketoacyl synthase
SMD11_RS32320	SM00826	SMD11_RS32320
SMD11_RS32320	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS32320	SM01294	SMD11_RS32320
SMD11_RS32325	SM00822	SMD11_RS32325
SMD11_RS32325	SM00823	Phosphopantetheine attachment site
SMD11_RS32325	SM00824	Thioesterase
SMD11_RS32325	SM00825	Beta-ketoacyl synthase
SMD11_RS32325	SM00826	SMD11_RS32325
SMD11_RS32325	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS32325	SM00829	Enoylreductase
SMD11_RS32325	SM01294	SMD11_RS32325
SMD11_RS32335	SM00822	SMD11_RS32335
SMD11_RS32335	SM00823	Phosphopantetheine attachment site
SMD11_RS32335	SM00825	Beta-ketoacyl synthase
SMD11_RS32335	SM00826	SMD11_RS32335
SMD11_RS32335	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS32335	SM01294	SMD11_RS32335
SMD11_RS32345	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS32350	SM00823	Phosphopantetheine attachment site
SMD11_RS32350	SM00825	Beta-ketoacyl synthase
SMD11_RS32350	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS32375	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS32420	SM00448	cheY-homologous receiver domain
SMD11_RS32420	SM00862	Transcriptional regulatory protein, C terminal
SMD11_RS32425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SMD11_RS32425	SM00387	Histidine kinase-like ATPases
SMD11_RS32425	SM00388	His Kinase A (phosphoacceptor) domain
SMD11_RS32450	SM00825	Beta-ketoacyl synthase
SMD11_RS32470	SM00903	Flavin reductase like domain
SMD11_RS32485	SM00448	cheY-homologous receiver domain
SMD11_RS32545	SM00998	Adenylosuccinate lyase C-terminus
SMD11_RS32570	SM01230	SMD11_RS32570
SMD11_RS32605	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS32615	SM00829	Enoylreductase
SMD11_RS32630	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS32630	SM00876	Biotin and Thiamin Synthesis associated domain
SMD11_RS32650	SM00825	Beta-ketoacyl synthase
SMD11_RS32655	SM00823	Phosphopantetheine attachment site
SMD11_RS32665	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS32665	SM00419	helix_turn_helix, cAMP Regulatory protein
SMD11_RS32680	SM00342	helix_turn_helix, arabinose operon control protein
SMD11_RS32695	SM01230	SMD11_RS32695
SMD11_RS32730	SM00506	Appr-1"-p processing enzyme
SMD11_RS32825	SM00870	SMD11_RS32825
SMD11_RS32830	SM00344	helix_turn_helix ASNC type
SMD11_RS32865	SM00530	Helix-turn-helix XRE-family like proteins 
SMD11_RS32870	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS32880	SM00923	MbtH-like protein
SMD11_RS32885	SM00823	Phosphopantetheine attachment site
SMD11_RS32920	SM00823	Phosphopantetheine attachment site
SMD11_RS32925	SM01209	SMD11_RS32925
SMD11_RS32930	SM00823	Phosphopantetheine attachment site
SMD11_RS32940	SM00823	Phosphopantetheine attachment site
SMD11_RS32940	SM00824	Thioesterase
SMD11_RS32955	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS32975	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SMD11_RS33035	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS33055	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS33055	SM00448	cheY-homologous receiver domain
SMD11_RS33080	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS33080	SM01134	SMD11_RS33080
SMD11_RS33090	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS33105	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS33175	SM00855	Phosphoglycerate mutase family
SMD11_RS33265	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS33290	SM00346	helix_turn_helix isocitrate lyase regulation
SMD11_RS33295	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SMD11_RS33300	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SMD11_RS33440	SM00421	helix_turn_helix, Lux Regulon
SMD11_RS33500	SM00470	ParB-like nuclease domain
SMD11_RS33580	SM00822	SMD11_RS33580
SMD11_RS33585	SM00729	Elongator protein 3, MiaB family, Radical SAM
SMD11_RS33590	SM00823	Phosphopantetheine attachment site
SMD11_RS33590	SM00825	Beta-ketoacyl synthase
SMD11_RS33590	SM00826	SMD11_RS33590
SMD11_RS33590	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS33635	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS33655	SM00308	Lipoxygenase homology 2 (beta barrel) domain
SMD11_RS33670	SM00331	Sigma factor PP2C-like phosphatases
SMD11_RS33670	SM01012	SMD11_RS33670
SMD11_RS33755	SM00220	Serine/Threonine protein kinases, catalytic domain
SMD11_RS33760	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS33760	SM01086	C-terminal, D2-small domain, of ClpB protein
SMD11_RS33770	SM00458	Ricin-type beta-trefoil
SMD11_RS33780	SM00953	SMD11_RS33780
SMD11_RS33810	SM01110	SMD11_RS33810
SMD11_RS33845	SM00855	Phosphoglycerate mutase family
SMD11_RS33860	SM00420	helix_turn_helix, Deoxyribose operon repressor
SMD11_RS33860	SM01134	SMD11_RS33860
SMD11_RS33900	SM00822	SMD11_RS33900
SMD11_RS33965	SM00458	Ricin-type beta-trefoil
SMD11_RS34070	SM00861	Transketolase, pyrimidine binding domain
SMD11_RS34155	SM00822	SMD11_RS34155
SMD11_RS34155	SM00823	Phosphopantetheine attachment site
SMD11_RS34155	SM00825	Beta-ketoacyl synthase
SMD11_RS34155	SM00826	SMD11_RS34155
SMD11_RS34155	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SMD11_RS34210	SM00248	ankyrin repeats
SMD11_RS34220	SM00347	helix_turn_helix multiple antibiotic resistance protein
SMD11_RS34320	SM00823	Phosphopantetheine attachment site
SMD11_RS34325	SM00822	SMD11_RS34325
SMD11_RS34325	SM00823	Phosphopantetheine attachment site
SMD11_RS34490	SM01192	SMD11_RS34490
SMD11_RS34565	SM00382	ATPases associated with a variety of cellular activities
SMD11_RS34585	SM00860	SMI1 / KNR4 family
