locus-tag class description SMD44_RS00090 PF01327 Polypeptide deformylase SMD44_RS00145 PF03793 PASTA domain SMD44_RS00145 PF00069 Protein kinase domain SMD44_RS00205 PF00698 Acyl transferase domain SMD44_RS00210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS00210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS00230 PF04551 GcpE protein SMD44_RS00260 PF00931 NB-ARC domain SMD44_RS00260 PF03704 Bacterial transcriptional activator domain SMD44_RS00260 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS00270 PF01070 FMN-dependent dehydrogenase SMD44_RS00280 PF01063 Amino-transferase class IV SMD44_RS00295 PF02615 Malate/L-lactate dehydrogenase SMD44_RS00300 PF13378 Enolase C-terminal domain-like SMD44_RS00300 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SMD44_RS00310 PF11583 P-aminobenzoate N-oxygenase AurF SMD44_RS00330 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS00335 PF12390 Selenocysteine synthase N terminal SMD44_RS00335 PF03841 L-seryl-tRNA selenium transferase SMD44_RS00345 PF00248 Aldo/keto reductase family SMD44_RS00365 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS00365 PF00072 Response regulator receiver domain SMD44_RS00370 PF07730 Histidine kinase SMD44_RS00375 PF07732 Multicopper oxidase SMD44_RS00375 PF07731 Multicopper oxidase SMD44_RS00375 PF00394 Multicopper oxidase SMD44_RS00385 PF00107 Zinc-binding dehydrogenase SMD44_RS00385 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS00425 PF05962 HutD SMD44_RS00465 PF12706 Beta-lactamase superfamily domain SMD44_RS00465 PF00753 Metallo-beta-lactamase superfamily SMD44_RS00500 PF01145 SPFH domain / Band 7 family SMD44_RS00540 PF12680 SnoaL-like domain SMD44_RS00540 PF04542 Sigma-70 region 2 SMD44_RS00540 PF08281 Sigma-70, region 4 SMD44_RS00545 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS00560 PF13411 MerR HTH family regulatory protein SMD44_RS00575 PF13460 NAD(P)H-binding SMD44_RS00580 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS00625 PF00072 Response regulator receiver domain SMD44_RS00625 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS00630 PF07730 Histidine kinase SMD44_RS00635 PF03176 MMPL family SMD44_RS00645 PF00005 ABC transporter SMD44_RS00660 PF01979 Amidohydrolase family SMD44_RS00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS00670 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS00675 PF04229 GrpB protein SMD44_RS00680 PF04978 Protein of unknown function (DUF664) SMD44_RS00690 PF16859 Tetracyclin repressor-like, C-terminal domain SMD44_RS00690 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS00720 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS00730 PF08281 Sigma-70, region 4 SMD44_RS00730 PF04542 Sigma-70 region 2 SMD44_RS00730 PF12680 SnoaL-like domain SMD44_RS00745 PF01593 Flavin containing amine oxidoreductase SMD44_RS00770 PF12697 Alpha/beta hydrolase family SMD44_RS00775 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS00785 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS00785 PF00698 Acyl transferase domain SMD44_RS00785 PF00107 Zinc-binding dehydrogenase SMD44_RS00785 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS00785 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS00785 PF14765 Polyketide synthase dehydratase SMD44_RS00785 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS00785 PF08659 KR domain SMD44_RS00785 PF00550 Phosphopantetheine attachment site SMD44_RS00800 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SMD44_RS00800 PF00400 WD domain, G-beta repeat SMD44_RS00820 PF03704 Bacterial transcriptional activator domain SMD44_RS00820 PF00931 NB-ARC domain SMD44_RS00820 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS00835 PF00107 Zinc-binding dehydrogenase SMD44_RS00835 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS00840 PF00144 Beta-lactamase SMD44_RS00850 PF00144 Beta-lactamase SMD44_RS00850 PF11954 Domain of unknown function (DUF3471) SMD44_RS00890 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS00890 PF13305 Tetracyclin repressor-like, C-terminal domain SMD44_RS00905 PF00072 Response regulator receiver domain SMD44_RS00905 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS00930 PF02424 ApbE family SMD44_RS00940 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS00940 PF00175 Oxidoreductase NAD-binding domain SMD44_RS00945 PF00072 Response regulator receiver domain SMD44_RS00945 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS00955 PF00561 alpha/beta hydrolase fold SMD44_RS00960 PF06445 GyrI-like small molecule binding domain SMD44_RS00960 PF12833 Helix-turn-helix domain SMD44_RS00965 PF13458 Periplasmic binding protein SMD44_RS00980 PF00732 GMC oxidoreductase SMD44_RS00980 PF05199 GMC oxidoreductase SMD44_RS01000 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS01000 PF13305 Tetracyclin repressor-like, C-terminal domain SMD44_RS01005 PF00005 ABC transporter SMD44_RS01005 PF13732 Domain of unknown function (DUF4162) SMD44_RS01010 PF01061 ABC-2 type transporter SMD44_RS01025 PF00285 Citrate synthase, C-terminal domain SMD44_RS01035 PF03972 MmgE/PrpD family SMD44_RS01040 PF01381 Helix-turn-helix SMD44_RS01040 PF06114 IrrE N-terminal-like domain SMD44_RS01040 PF09856 Predicted transcriptional regulator (DUF2083) SMD44_RS01045 PF01381 Helix-turn-helix SMD44_RS01045 PF09856 Predicted transcriptional regulator (DUF2083) SMD44_RS01045 PF06114 IrrE N-terminal-like domain SMD44_RS01055 PF08267 Cobalamin-independent synthase, N-terminal domain SMD44_RS01055 PF01717 Cobalamin-independent synthase, Catalytic domain SMD44_RS01060 PF00456 Transketolase, thiamine diphosphate binding domain SMD44_RS01060 PF02779 Transketolase, pyrimidine binding domain SMD44_RS01060 PF02780 Transketolase, C-terminal domain SMD44_RS01065 PF00682 HMGL-like SMD44_RS01065 PF08502 LeuA allosteric (dimerisation) domain SMD44_RS01075 PF07972 NrdI Flavodoxin like SMD44_RS01080 PF02867 Ribonucleotide reductase, barrel domain SMD44_RS01080 PF08343 Ribonucleotide reductase N-terminal SMD44_RS01080 PF00317 Ribonucleotide reductase, all-alpha domain SMD44_RS01085 PF00268 Ribonucleotide reductase, small chain SMD44_RS01090 PF02926 THUMP domain SMD44_RS01090 PF02568 Thiamine biosynthesis protein (ThiI) SMD44_RS01095 PF00293 NUDIX domain SMD44_RS01105 PF12833 Helix-turn-helix domain SMD44_RS01105 PF01965 DJ-1/PfpI family SMD44_RS01115 PF00069 Protein kinase domain SMD44_RS01115 PF13360 PQQ-like domain SMD44_RS01140 PF04978 Protein of unknown function (DUF664) SMD44_RS01155 PF00248 Aldo/keto reductase family SMD44_RS01165 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SMD44_RS01165 PF03033 Glycosyltransferase family 28 N-terminal domain SMD44_RS01170 PF00672 HAMP domain SMD44_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS01170 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS01175 PF00072 Response regulator receiver domain SMD44_RS01175 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS01210 PF07690 Major Facilitator Superfamily SMD44_RS01215 PF01638 HxlR-like helix-turn-helix SMD44_RS01230 PF00672 HAMP domain SMD44_RS01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS01230 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS01235 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS01235 PF00072 Response regulator receiver domain SMD44_RS01250 PF00144 Beta-lactamase SMD44_RS01250 PF11954 Domain of unknown function (DUF3471) SMD44_RS01255 PF00425 chorismate binding enzyme SMD44_RS01260 PF00106 short chain dehydrogenase SMD44_RS01270 PF01966 HD domain SMD44_RS01275 PF00144 Beta-lactamase SMD44_RS01295 PF01047 MarR family SMD44_RS01300 PF00561 alpha/beta hydrolase fold SMD44_RS01310 PF02082 Transcriptional regulator SMD44_RS01340 PF02733 Dak1 domain SMD44_RS01350 PF00144 Beta-lactamase SMD44_RS01360 PF00144 Beta-lactamase SMD44_RS01360 PF11954 Domain of unknown function (DUF3471) SMD44_RS01365 PF07730 Histidine kinase SMD44_RS01370 PF00072 Response regulator receiver domain SMD44_RS01370 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS01385 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS01385 PF00107 Zinc-binding dehydrogenase SMD44_RS01400 PF00376 MerR family regulatory protein SMD44_RS01400 PF09278 MerR, DNA binding SMD44_RS01405 PF01965 DJ-1/PfpI family SMD44_RS01410 PF13302 Acetyltransferase (GNAT) domain SMD44_RS01445 PF06772 Bacterial low temperature requirement A protein (LtrA) SMD44_RS01450 PF00135 Carboxylesterase family SMD44_RS01455 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS01460 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS01460 PF00550 Phosphopantetheine attachment site SMD44_RS01460 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS01460 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS01460 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS01460 PF08659 KR domain SMD44_RS01460 PF14765 Polyketide synthase dehydratase SMD44_RS01460 PF08990 Erythronolide synthase docking SMD44_RS01460 PF00698 Acyl transferase domain SMD44_RS01465 PF01494 FAD binding domain SMD44_RS01475 PF01032 FecCD transport family SMD44_RS01480 PF01032 FecCD transport family SMD44_RS01490 PF04954 Siderophore-interacting protein SMD44_RS01490 PF08021 Siderophore-interacting FAD-binding domain SMD44_RS01510 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS01520 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS01535 PF10503 Esterase PHB depolymerase SMD44_RS01555 PF03952 Enolase, N-terminal domain SMD44_RS01555 PF00113 Enolase, C-terminal TIM barrel domain SMD44_RS01580 PF00188 Cysteine-rich secretory protein family SMD44_RS01585 PF13407 Periplasmic binding protein domain SMD44_RS01590 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS01590 PF07729 FCD domain SMD44_RS01605 PF01638 HxlR-like helix-turn-helix SMD44_RS01620 PF00248 Aldo/keto reductase family SMD44_RS01630 PF03466 LysR substrate binding domain SMD44_RS01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS01635 PF00144 Beta-lactamase SMD44_RS01640 PF01022 Bacterial regulatory protein, arsR family SMD44_RS01645 PF07690 Major Facilitator Superfamily SMD44_RS01665 PF00248 Aldo/keto reductase family SMD44_RS01670 PF13530 Sterol carrier protein domain SMD44_RS01670 PF17668 Acetyltransferase (GNAT) domain SMD44_RS01700 PF00005 ABC transporter SMD44_RS01700 PF00664 ABC transporter transmembrane region SMD44_RS01720 PF14525 AraC-binding-like domain SMD44_RS01720 PF12833 Helix-turn-helix domain SMD44_RS01740 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS01745 PF00171 Aldehyde dehydrogenase family SMD44_RS01750 PF14716 Helix-hairpin-helix domain SMD44_RS01750 PF02811 PHP domain SMD44_RS01750 PF14791 DNA polymerase beta thumb SMD44_RS01760 PF01381 Helix-turn-helix SMD44_RS01800 PF13378 Enolase C-terminal domain-like SMD44_RS01800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SMD44_RS01815 PF01244 Membrane dipeptidase (Peptidase family M19) SMD44_RS01820 PF00144 Beta-lactamase SMD44_RS01830 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SMD44_RS01835 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS01835 PF16295 Tetracyclin repressor-like, C-terminal domain SMD44_RS01845 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS01845 PF00970 Oxidoreductase FAD-binding domain SMD44_RS01855 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS01855 PF00072 Response regulator receiver domain SMD44_RS01860 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS01865 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS01865 PF00107 Zinc-binding dehydrogenase SMD44_RS01870 PF13649 Methyltransferase domain SMD44_RS01875 PF00202 Aminotransferase class-III SMD44_RS01905 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS01905 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS01910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS01910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS01915 PF00106 short chain dehydrogenase SMD44_RS01920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS01920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS01925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS01925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS01935 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS01935 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS01945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS01945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS01950 PF00550 Phosphopantetheine attachment site SMD44_RS01955 PF07690 Major Facilitator Superfamily SMD44_RS01980 PF03704 Bacterial transcriptional activator domain SMD44_RS01980 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS01980 PF00931 NB-ARC domain SMD44_RS02005 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS02005 PF00072 Response regulator receiver domain SMD44_RS02015 PF00768 D-alanyl-D-alanine carboxypeptidase SMD44_RS02030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMD44_RS02030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMD44_RS02040 PF04960 Glutaminase SMD44_RS02045 PF11975 Family 4 glycosyl hydrolase C-terminal domain SMD44_RS02045 PF02056 Family 4 glycosyl hydrolase SMD44_RS02050 PF00294 pfkB family carbohydrate kinase SMD44_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02060 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02075 PF08220 DeoR-like helix-turn-helix domain SMD44_RS02075 PF00455 DeoR C terminal sensor domain SMD44_RS02085 PF00881 Nitroreductase family SMD44_RS02105 PF01965 DJ-1/PfpI family SMD44_RS02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS02115 PF03466 LysR substrate binding domain SMD44_RS02150 PF00106 short chain dehydrogenase SMD44_RS02165 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS02165 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS02175 PF00376 MerR family regulatory protein SMD44_RS02175 PF09278 MerR, DNA binding SMD44_RS02200 PF00891 O-methyltransferase domain SMD44_RS02210 PF00067 Cytochrome P450 SMD44_RS02225 PF00875 DNA photolyase SMD44_RS02225 PF03441 FAD binding domain of DNA photolyase SMD44_RS02235 PF13411 MerR HTH family regulatory protein SMD44_RS02240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMD44_RS02240 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS02260 PF01204 Trehalase SMD44_RS02270 PF00975 Thioesterase domain SMD44_RS02275 PF08659 KR domain SMD44_RS02275 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02275 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS02275 PF00698 Acyl transferase domain SMD44_RS02275 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02275 PF14765 Polyketide synthase dehydratase SMD44_RS02275 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02275 PF00550 Phosphopantetheine attachment site SMD44_RS02280 PF08659 KR domain SMD44_RS02280 PF00550 Phosphopantetheine attachment site SMD44_RS02280 PF14765 Polyketide synthase dehydratase SMD44_RS02280 PF00698 Acyl transferase domain SMD44_RS02280 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02280 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS02280 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02280 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02285 PF14765 Polyketide synthase dehydratase SMD44_RS02285 PF00550 Phosphopantetheine attachment site SMD44_RS02285 PF08659 KR domain SMD44_RS02285 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02285 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02285 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02285 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS02285 PF00698 Acyl transferase domain SMD44_RS02295 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02295 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02295 PF08659 KR domain SMD44_RS02295 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02295 PF00550 Phosphopantetheine attachment site SMD44_RS02295 PF00698 Acyl transferase domain SMD44_RS02295 PF14765 Polyketide synthase dehydratase SMD44_RS02300 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02300 PF14765 Polyketide synthase dehydratase SMD44_RS02300 PF00550 Phosphopantetheine attachment site SMD44_RS02300 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02300 PF00698 Acyl transferase domain SMD44_RS02300 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02300 PF08659 KR domain SMD44_RS02305 PF08990 Erythronolide synthase docking SMD44_RS02305 PF00698 Acyl transferase domain SMD44_RS02305 PF14765 Polyketide synthase dehydratase SMD44_RS02305 PF08659 KR domain SMD44_RS02305 PF00550 Phosphopantetheine attachment site SMD44_RS02305 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS02305 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS02305 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS02305 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS02315 PF07859 alpha/beta hydrolase fold SMD44_RS02345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMD44_RS02345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS02345 PF01842 ACT domain SMD44_RS02350 PF01261 Xylose isomerase-like TIM barrel SMD44_RS02395 PF01434 Peptidase family M41 SMD44_RS02395 PF17862 AAA+ lid domain SMD44_RS02395 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS02395 PF06480 FtsH Extracellular SMD44_RS02410 PF00144 Beta-lactamase SMD44_RS02440 PF00892 EamA-like transporter family SMD44_RS02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS02445 PF03466 LysR substrate binding domain SMD44_RS02475 PF08241 Methyltransferase domain SMD44_RS02485 PF13411 MerR HTH family regulatory protein SMD44_RS02500 PF07690 Major Facilitator Superfamily SMD44_RS02505 PF01156 Inosine-uridine preferring nucleoside hydrolase SMD44_RS02510 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS02520 PF01966 HD domain SMD44_RS02520 PF13286 Phosphohydrolase-associated domain SMD44_RS02525 PF04229 GrpB protein SMD44_RS02545 PF00005 ABC transporter SMD44_RS02545 PF13732 Domain of unknown function (DUF4162) SMD44_RS02550 PF07681 DoxX SMD44_RS02555 PF00583 Acetyltransferase (GNAT) family SMD44_RS02565 PF00067 Cytochrome P450 SMD44_RS02600 PF12697 Alpha/beta hydrolase family SMD44_RS02620 PF00135 Carboxylesterase family SMD44_RS02635 PF00005 ABC transporter SMD44_RS02640 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS02640 PF00072 Response regulator receiver domain SMD44_RS02645 PF07730 Histidine kinase SMD44_RS02650 PF13411 MerR HTH family regulatory protein SMD44_RS02660 PF00857 Isochorismatase family SMD44_RS02665 PF08220 DeoR-like helix-turn-helix domain SMD44_RS02665 PF00455 DeoR C terminal sensor domain SMD44_RS02675 PF01116 Fructose-bisphosphate aldolase class-II SMD44_RS02680 PF00089 Trypsin SMD44_RS02710 PF00005 ABC transporter SMD44_RS02710 PF00664 ABC transporter transmembrane region SMD44_RS02715 PF01168 Alanine racemase, N-terminal domain SMD44_RS02720 PF01047 MarR family SMD44_RS02725 PF00561 alpha/beta hydrolase fold SMD44_RS02730 PF00480 ROK family SMD44_RS02730 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMD44_RS02735 PF01547 Bacterial extracellular solute-binding protein SMD44_RS02740 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02745 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02750 PF00232 Glycosyl hydrolase family 1 SMD44_RS02765 PF01161 Phosphatidylethanolamine-binding protein SMD44_RS02770 PF18357 Diphteria toxin repressor SH3 domain SMD44_RS02770 PF02742 Iron dependent repressor, metal binding and dimerisation domain SMD44_RS02770 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMD44_RS02775 PF03023 Lipid II flippase MurJ SMD44_RS02785 PF00561 alpha/beta hydrolase fold SMD44_RS02790 PF00171 Aldehyde dehydrogenase family SMD44_RS02795 PF05544 Proline racemase SMD44_RS02800 PF00701 Dihydrodipicolinate synthetase family SMD44_RS02805 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS02805 PF04324 BFD-like [2Fe-2S] binding domain SMD44_RS02825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02830 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS02840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS02840 PF00005 ABC transporter SMD44_RS02845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS02845 PF00005 ABC transporter SMD44_RS02850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS02850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMD44_RS02855 PF00248 Aldo/keto reductase family SMD44_RS02870 PF01588 Putative tRNA binding domain SMD44_RS02870 PF09334 tRNA synthetases class I (M) SMD44_RS02870 PF08264 Anticodon-binding domain of tRNA SMD44_RS02875 PF00296 Luciferase-like monooxygenase SMD44_RS02890 PF13538 UvrD-like helicase C-terminal domain SMD44_RS02900 PF01638 HxlR-like helix-turn-helix SMD44_RS02920 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS02920 PF13977 BetI-type transcriptional repressor, C-terminal SMD44_RS02940 PF03033 Glycosyltransferase family 28 N-terminal domain SMD44_RS02950 PF01783 Ribosomal L32p protein family SMD44_RS02965 PF10282 Lactonase, 7-bladed beta-propeller SMD44_RS02980 PF08546 Ketopantoate reductase PanE/ApbA C terminal SMD44_RS02980 PF02558 Ketopantoate reductase PanE/ApbA SMD44_RS02985 PF00857 Isochorismatase family SMD44_RS03000 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS03000 PF00107 Zinc-binding dehydrogenase SMD44_RS03010 PF00255 Glutathione peroxidase SMD44_RS03030 PF07943 Penicillin-binding protein 5, C-terminal domain SMD44_RS03030 PF00768 D-alanyl-D-alanine carboxypeptidase SMD44_RS03035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS03035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS03040 PF08021 Siderophore-interacting FAD-binding domain SMD44_RS03040 PF00005 ABC transporter SMD44_RS03040 PF00664 ABC transporter transmembrane region SMD44_RS03040 PF04954 Siderophore-interacting protein SMD44_RS03060 PF01039 Carboxyl transferase domain SMD44_RS03060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SMD44_RS03060 PF17848 Acetyl-coA carboxylase zinc finger domain SMD44_RS03065 PF01068 ATP dependent DNA ligase domain SMD44_RS03065 PF04679 ATP dependent DNA ligase C terminal region SMD44_RS03085 PF07690 Major Facilitator Superfamily SMD44_RS03090 PF07690 Major Facilitator Superfamily SMD44_RS03095 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SMD44_RS03095 PF03900 Porphobilinogen deaminase, C-terminal domain SMD44_RS03100 PF00296 Luciferase-like monooxygenase SMD44_RS03115 PF02655 ATP-grasp domain SMD44_RS03115 PF00206 Lyase SMD44_RS03125 PF02222 ATP-grasp domain SMD44_RS03125 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS03130 PF01613 Flavin reductase like domain SMD44_RS03135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMD44_RS03140 PF00155 Aminotransferase class I and II SMD44_RS03145 PF00072 Response regulator receiver domain SMD44_RS03145 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS03150 PF01638 HxlR-like helix-turn-helix SMD44_RS03160 PF00005 ABC transporter SMD44_RS03205 PF01261 Xylose isomerase-like TIM barrel SMD44_RS03220 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS03230 PF00480 ROK family SMD44_RS03260 PF04343 Protein of unknown function, DUF488 SMD44_RS03270 PF02824 TGS domain SMD44_RS03270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS03270 PF03129 Anticodon binding domain SMD44_RS03270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMD44_RS03295 PF00067 Cytochrome P450 SMD44_RS03320 PF04542 Sigma-70 region 2 SMD44_RS03320 PF08281 Sigma-70, region 4 SMD44_RS03330 PF00144 Beta-lactamase SMD44_RS03360 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SMD44_RS03365 PF00551 Formyl transferase SMD44_RS03365 PF02911 Formyl transferase, C-terminal domain SMD44_RS03365 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS03370 PF03621 MbtH-like protein SMD44_RS03380 PF07969 Amidohydrolase family SMD44_RS03405 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS03410 PF00501 AMP-binding enzyme SMD44_RS03410 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS03420 PF00150 Cellulase (glycosyl hydrolase family 5) SMD44_RS03420 PF00553 Cellulose binding domain SMD44_RS03425 PF14535 AMP-binding enzyme C-terminal domain SMD44_RS03425 PF00501 AMP-binding enzyme SMD44_RS03450 PF03466 LysR substrate binding domain SMD44_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS03455 PF00501 AMP-binding enzyme SMD44_RS03455 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS03460 PF01804 Penicillin amidase SMD44_RS03465 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS03465 PF00501 AMP-binding enzyme SMD44_RS03470 PF03060 Nitronate monooxygenase SMD44_RS03475 PF01494 FAD binding domain SMD44_RS03480 PF13378 Enolase C-terminal domain-like SMD44_RS03485 PF01614 Bacterial transcriptional regulator SMD44_RS03485 PF09339 IclR helix-turn-helix domain SMD44_RS03490 PF01546 Peptidase family M20/M25/M40 SMD44_RS03490 PF07687 Peptidase dimerisation domain SMD44_RS03495 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS03510 PF03793 PASTA domain SMD44_RS03510 PF00069 Protein kinase domain SMD44_RS03525 PF02342 TerD domain SMD44_RS03555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS03555 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS03555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS03570 PF01494 FAD binding domain SMD44_RS03590 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS03590 PF16485 Protealysin propeptide SMD44_RS03590 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS03635 PF09363 XFP C-terminal domain SMD44_RS03635 PF09364 XFP N-terminal domain SMD44_RS03635 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase SMD44_RS03645 PF00582 Universal stress protein family SMD44_RS03655 PF00005 ABC transporter SMD44_RS03690 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS03695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS03700 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS03710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS03710 PF00005 ABC transporter SMD44_RS03720 PF04542 Sigma-70 region 2 SMD44_RS03720 PF08281 Sigma-70, region 4 SMD44_RS03730 PF01494 FAD binding domain SMD44_RS03745 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS03755 PF07690 Major Facilitator Superfamily SMD44_RS03775 PF02733 Dak1 domain SMD44_RS03790 PF00041 Fibronectin type III domain SMD44_RS03790 PF00704 Glycosyl hydrolases family 18 SMD44_RS03810 PF00171 Aldehyde dehydrogenase family SMD44_RS03815 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS03825 PF03466 LysR substrate binding domain SMD44_RS03825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS03845 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS03850 PF01494 FAD binding domain SMD44_RS03870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS03880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMD44_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS03885 PF01037 Lrp/AsnC ligand binding domain SMD44_RS03895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMD44_RS03895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMD44_RS03905 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA SMD44_RS03910 PF00106 short chain dehydrogenase SMD44_RS03915 PF13532 2OG-Fe(II) oxygenase superfamily SMD44_RS03920 PF05175 Methyltransferase small domain SMD44_RS03935 PF00795 Carbon-nitrogen hydrolase SMD44_RS03935 PF00535 Glycosyl transferase family 2 SMD44_RS03950 PF01177 Asp/Glu/Hydantoin racemase SMD44_RS03960 PF02342 TerD domain SMD44_RS03980 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS03980 PF17866 AAA lid domain SMD44_RS03990 PF00455 DeoR C terminal sensor domain SMD44_RS03990 PF08220 DeoR-like helix-turn-helix domain SMD44_RS04000 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS04015 PF02687 FtsX-like permease family SMD44_RS04015 PF12704 MacB-like periplasmic core domain SMD44_RS04020 PF00005 ABC transporter SMD44_RS04030 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS04030 PF16925 Tetracyclin repressor-like, C-terminal domain SMD44_RS04045 PF02126 Phosphotriesterase family SMD44_RS04060 PF07690 Major Facilitator Superfamily SMD44_RS04065 PF00480 ROK family SMD44_RS04065 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMD44_RS04070 PF07690 Major Facilitator Superfamily SMD44_RS04085 PF07478 D-ala D-ala ligase C-terminus SMD44_RS04085 PF01820 D-ala D-ala ligase N-terminus SMD44_RS04095 PF00400 WD domain, G-beta repeat SMD44_RS04095 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SMD44_RS04125 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS04125 PF00072 Response regulator receiver domain SMD44_RS04130 PF07730 Histidine kinase SMD44_RS04135 PF01134 Glucose inhibited division protein A SMD44_RS04135 PF13932 GidA associated domain SMD44_RS04140 PF01546 Peptidase family M20/M25/M40 SMD44_RS04140 PF07687 Peptidase dimerisation domain SMD44_RS04150 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS04150 PF00072 Response regulator receiver domain SMD44_RS04155 PF07730 Histidine kinase SMD44_RS04165 PF00753 Metallo-beta-lactamase superfamily SMD44_RS04185 PF07730 Histidine kinase SMD44_RS04310 PF16473 3' exoribonuclease, RNase T-like SMD44_RS04325 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family SMD44_RS04330 PF13439 Glycosyltransferase Family 4 SMD44_RS04525 PF00293 NUDIX domain SMD44_RS04640 PF00772 DnaB-like helicase N terminal domain SMD44_RS04640 PF03796 DnaB-like helicase C terminal domain SMD44_RS04645 PF01695 IstB-like ATP binding protein SMD44_RS04680 PF03837 RecT family SMD44_RS04745 PF10548 P22AR C-terminal domain SMD44_RS04745 PF02498 BRO family, N-terminal domain SMD44_RS04765 PF00589 Phage integrase family SMD44_RS04770 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS04775 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS04785 PF16499 Alpha galactosidase A SMD44_RS04785 PF17801 Alpha galactosidase C-terminal beta sandwich domain SMD44_RS04790 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS04790 PF03704 Bacterial transcriptional activator domain SMD44_RS04790 PF00931 NB-ARC domain SMD44_RS04795 PF00480 ROK family SMD44_RS04800 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS04830 PF00069 Protein kinase domain SMD44_RS04845 PF01012 Electron transfer flavoprotein domain SMD44_RS04845 PF00766 Electron transfer flavoprotein FAD-binding domain SMD44_RS04850 PF01012 Electron transfer flavoprotein domain SMD44_RS04865 PF01553 Acyltransferase SMD44_RS04885 PF01212 Beta-eliminating lyase SMD44_RS04900 PF07859 alpha/beta hydrolase fold SMD44_RS04905 PF00296 Luciferase-like monooxygenase SMD44_RS04920 PF03009 Glycerophosphoryl diester phosphodiesterase family SMD44_RS04955 PF01569 PAP2 superfamily SMD44_RS04965 PF10944 Protein of unknown function (DUF2630) SMD44_RS04970 PF17934 Tetracyclin repressor-like, C-terminal domain SMD44_RS04970 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS04980 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS04985 PF13309 HTH domain SMD44_RS04985 PF08348 YheO-like PAS domain SMD44_RS05000 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS05000 PF07729 FCD domain SMD44_RS05005 PF07690 Major Facilitator Superfamily SMD44_RS05025 PF00227 Proteasome subunit SMD44_RS05035 PF00722 Glycosyl hydrolases family 16 SMD44_RS05050 PF00072 Response regulator receiver domain SMD44_RS05050 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS05065 PF08281 Sigma-70, region 4 SMD44_RS05065 PF04542 Sigma-70 region 2 SMD44_RS05090 PF01425 Amidase SMD44_RS05095 PF00561 alpha/beta hydrolase fold SMD44_RS05120 PF02913 FAD linked oxidases, C-terminal domain SMD44_RS05120 PF13183 4Fe-4S dicluster domain SMD44_RS05120 PF01565 FAD binding domain SMD44_RS05125 PF00266 Aminotransferase class-V SMD44_RS05130 PF01614 Bacterial transcriptional regulator SMD44_RS05130 PF09339 IclR helix-turn-helix domain SMD44_RS05140 PF03611 PTS system sugar-specific permease component SMD44_RS05150 PF00106 short chain dehydrogenase SMD44_RS05165 PF00797 N-acetyltransferase SMD44_RS05170 PF13350 Tyrosine phosphatase family SMD44_RS05195 PF03176 MMPL family SMD44_RS05210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMD44_RS05210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMD44_RS05215 PF01965 DJ-1/PfpI family SMD44_RS05220 PF05175 Methyltransferase small domain SMD44_RS05235 PF00975 Thioesterase domain SMD44_RS05240 PF08450 SMP-30/Gluconolactonase/LRE-like region SMD44_RS05255 PF02583 Metal-sensitive transcriptional repressor SMD44_RS05260 PF01925 Sulfite exporter TauE/SafE SMD44_RS05270 PF04030 D-arabinono-1,4-lactone oxidase SMD44_RS05270 PF01565 FAD binding domain SMD44_RS05275 PF17967 Pullulanase N2 domain SMD44_RS05275 PF18494 Pullulanase Ins domain SMD44_RS05275 PF03714 Bacterial pullanase-associated domain SMD44_RS05275 PF11852 Domain of unknown function (DUF3372) SMD44_RS05275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMD44_RS05280 PF00686 Starch binding domain SMD44_RS05280 PF00128 Alpha amylase, catalytic domain SMD44_RS05280 PF02806 Alpha amylase, C-terminal all-beta domain SMD44_RS05285 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS05290 PF00128 Alpha amylase, catalytic domain SMD44_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS05300 PF14785 Maltose transport system permease protein MalF P2 domain SMD44_RS05305 PF13416 Bacterial extracellular solute-binding protein SMD44_RS05310 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS05315 PF01022 Bacterial regulatory protein, arsR family SMD44_RS05320 PF00005 ABC transporter SMD44_RS05340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase SMD44_RS05360 PF01965 DJ-1/PfpI family SMD44_RS05365 PF12833 Helix-turn-helix domain SMD44_RS05365 PF01965 DJ-1/PfpI family SMD44_RS05380 PF01145 SPFH domain / Band 7 family SMD44_RS05400 PF03458 UPF0126 domain SMD44_RS05405 PF02702 Osmosensitive K+ channel His kinase sensor domain SMD44_RS05405 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS05405 PF13493 Domain of unknown function (DUF4118) SMD44_RS05405 PF00582 Universal stress protein family SMD44_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS05410 PF00582 Universal stress protein family SMD44_RS05410 PF02702 Osmosensitive K+ channel His kinase sensor domain SMD44_RS05410 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS05410 PF13493 Domain of unknown function (DUF4118) SMD44_RS05420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS05420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS05435 PF00720 Subtilisin inhibitor-like SMD44_RS05445 PF04075 F420H(2)-dependent quinone reductase SMD44_RS05455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family SMD44_RS05460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMD44_RS05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS05470 PF05977 Transmembrane secretion effector SMD44_RS05495 PF03793 PASTA domain SMD44_RS05495 PF00069 Protein kinase domain SMD44_RS05510 PF08281 Sigma-70, region 4 SMD44_RS05510 PF04542 Sigma-70 region 2 SMD44_RS05525 PF00733 Asparagine synthase SMD44_RS05525 PF13537 Glutamine amidotransferase domain SMD44_RS05535 PF00892 EamA-like transporter family SMD44_RS05555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS05555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS05575 PF01112 Asparaginase SMD44_RS05580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS05580 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS05580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS05590 PF01327 Polypeptide deformylase SMD44_RS05595 PF08245 Mur ligase middle domain SMD44_RS05595 PF08353 Domain of unknown function (DUF1727) SMD44_RS05600 PF07685 CobB/CobQ-like glutamine amidotransferase domain SMD44_RS05605 PF00365 Phosphofructokinase SMD44_RS05610 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) SMD44_RS05610 PF05425 Copper resistance protein D SMD44_RS05615 PF00720 Subtilisin inhibitor-like SMD44_RS05620 PF01553 Acyltransferase SMD44_RS05630 PF04073 Aminoacyl-tRNA editing domain SMD44_RS05635 PF00561 alpha/beta hydrolase fold SMD44_RS05640 PF00589 Phage integrase family SMD44_RS05645 PF12728 Helix-turn-helix domain SMD44_RS05690 PF01580 FtsK/SpoIIIE family SMD44_RS05730 PF01774 UreD urease accessory protein SMD44_RS05735 PF02492 CobW/HypB/UreG, nucleotide-binding domain SMD44_RS05745 PF01979 Amidohydrolase family SMD44_RS05745 PF00449 Urease alpha-subunit, N-terminal domain SMD44_RS05750 PF00699 Urease beta subunit SMD44_RS05755 PF00547 Urease, gamma subunit SMD44_RS05760 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS05775 PF00574 Clp protease SMD44_RS05795 PF01810 LysE type translocator SMD44_RS05800 PF03466 LysR substrate binding domain SMD44_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS05820 PF00155 Aminotransferase class I and II SMD44_RS05825 PF06968 Biotin and Thiamin Synthesis associated domain SMD44_RS05825 PF04055 Radical SAM superfamily SMD44_RS05830 PF00202 Aminotransferase class-III SMD44_RS05840 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS05865 PF02687 FtsX-like permease family SMD44_RS05865 PF00005 ABC transporter SMD44_RS05865 PF12704 MacB-like periplasmic core domain SMD44_RS05870 PF00296 Luciferase-like monooxygenase SMD44_RS05875 PF03471 Transporter associated domain SMD44_RS05875 PF00571 CBS domain SMD44_RS05875 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS05880 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS05880 PF00571 CBS domain SMD44_RS05890 PF03466 LysR substrate binding domain SMD44_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS05910 PF03055 Retinal pigment epithelial membrane protein SMD44_RS05915 PF07690 Major Facilitator Superfamily SMD44_RS05925 PF00206 Lyase SMD44_RS05925 PF10397 Adenylosuccinate lyase C-terminus SMD44_RS05930 PF09335 SNARE associated Golgi protein SMD44_RS05940 PF05384 Sensor protein DegS SMD44_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS05940 PF07730 Histidine kinase SMD44_RS05945 PF00072 Response regulator receiver domain SMD44_RS05945 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS05950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMD44_RS05950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMD44_RS05965 PF00072 Response regulator receiver domain SMD44_RS05965 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS05975 PF00106 short chain dehydrogenase SMD44_RS05985 PF01642 Methylmalonyl-CoA mutase SMD44_RS05990 PF02310 B12 binding domain SMD44_RS05990 PF01642 Methylmalonyl-CoA mutase SMD44_RS06000 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS06015 PF00005 ABC transporter SMD44_RS06020 PF07730 Histidine kinase SMD44_RS06025 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS06025 PF00072 Response regulator receiver domain SMD44_RS06030 PF00480 ROK family SMD44_RS06035 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS06035 PF07702 UTRA domain SMD44_RS06040 PF04542 Sigma-70 region 2 SMD44_RS06040 PF08281 Sigma-70, region 4 SMD44_RS06040 PF12680 SnoaL-like domain SMD44_RS06045 PF00561 alpha/beta hydrolase fold SMD44_RS06045 PF00364 Biotin-requiring enzyme SMD44_RS06060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS06060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS06065 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS06085 PF00581 Rhodanese-like domain SMD44_RS06090 PF01037 Lrp/AsnC ligand binding domain SMD44_RS06095 PF13476 AAA domain SMD44_RS06100 PF12320 Type 5 capsule protein repressor C-terminal domain SMD44_RS06100 PF00149 Calcineurin-like phosphoesterase SMD44_RS06115 PF00069 Protein kinase domain SMD44_RS06115 PF14032 PknH-like extracellular domain SMD44_RS06130 PF09186 Domain of unknown function (DUF1949) SMD44_RS06130 PF01205 Uncharacterized protein family UPF0029 SMD44_RS06135 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SMD44_RS06135 PF01648 4'-phosphopantetheinyl transferase superfamily SMD44_RS06160 PF02342 TerD domain SMD44_RS06165 PF13380 CoA binding domain SMD44_RS06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS06190 PF00672 HAMP domain SMD44_RS06190 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS06200 PF00535 Glycosyl transferase family 2 SMD44_RS06235 PF01553 Acyltransferase SMD44_RS06250 PF02515 CoA-transferase family III SMD44_RS06270 PF00132 Bacterial transferase hexapeptide (six repeats) SMD44_RS06275 PF00132 Bacterial transferase hexapeptide (six repeats) SMD44_RS06280 PF00561 alpha/beta hydrolase fold SMD44_RS06285 PF00144 Beta-lactamase SMD44_RS06290 PF09335 SNARE associated Golgi protein SMD44_RS06295 PF00135 Carboxylesterase family SMD44_RS06340 PF03143 Elongation factor Tu C-terminal domain SMD44_RS06340 PF03144 Elongation factor Tu domain 2 SMD44_RS06340 PF00009 Elongation factor Tu GTP binding domain SMD44_RS06355 PF02673 Bacitracin resistance protein BacA SMD44_RS06395 PF03466 LysR substrate binding domain SMD44_RS06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS06400 PF16859 Tetracyclin repressor-like, C-terminal domain SMD44_RS06400 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS06405 PF07690 Major Facilitator Superfamily SMD44_RS06420 PF00795 Carbon-nitrogen hydrolase SMD44_RS06425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS06430 PF01494 FAD binding domain SMD44_RS06450 PF03167 Uracil DNA glycosylase superfamily SMD44_RS06455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS06480 PF00326 Prolyl oligopeptidase family SMD44_RS06480 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SMD44_RS06490 PF00857 Isochorismatase family SMD44_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS06500 PF03466 LysR substrate binding domain SMD44_RS06505 PF00892 EamA-like transporter family SMD44_RS06510 PF00155 Aminotransferase class I and II SMD44_RS06510 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS06545 PF17827 PrmC N-terminal domain SMD44_RS06545 PF05175 Methyltransferase small domain SMD44_RS06555 PF03551 Transcriptional regulator PadR-like family SMD44_RS06560 PF02567 Phenazine biosynthesis-like protein SMD44_RS06590 PF02347 Glycine cleavage system P-protein SMD44_RS06600 PF11799 impB/mucB/samB family C-terminal domain SMD44_RS06600 PF00817 impB/mucB/samB family SMD44_RS06605 PF13411 MerR HTH family regulatory protein SMD44_RS06610 PF02577 Bifunctional nuclease SMD44_RS06615 PF00376 MerR family regulatory protein SMD44_RS06620 PF00498 FHA domain SMD44_RS06625 PF05949 Bacterial protein of unknown function (DUF881) SMD44_RS06630 PF06947 Protein of unknown function (DUF1290) SMD44_RS06635 PF05949 Bacterial protein of unknown function (DUF881) SMD44_RS06640 PF00483 Nucleotidyl transferase SMD44_RS06645 PF01066 CDP-alcohol phosphatidyltransferase SMD44_RS06670 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMD44_RS06670 PF02378 Phosphotransferase system, EIIC SMD44_RS06670 PF00367 phosphotransferase system, EIIB SMD44_RS06675 PF00391 PEP-utilising enzyme, mobile domain SMD44_RS06675 PF02896 PEP-utilising enzyme, TIM barrel domain SMD44_RS06675 PF05524 PEP-utilising enzyme, N-terminal SMD44_RS06685 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS06685 PF00501 AMP-binding enzyme SMD44_RS06690 PF16338 Domain of unknown function (DUF4968) SMD44_RS06690 PF13802 Galactose mutarotase-like SMD44_RS06690 PF01055 Glycosyl hydrolases family 31 SMD44_RS06690 PF17137 Domain of unknown function (DUF5110) SMD44_RS06695 PF00293 NUDIX domain SMD44_RS06695 PF13344 Haloacid dehalogenase-like hydrolase SMD44_RS06700 PF01427 D-ala-D-ala dipeptidase SMD44_RS06715 PF00230 Major intrinsic protein SMD44_RS06720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMD44_RS06720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SMD44_RS06730 PF05378 Hydantoinase/oxoprolinase N-terminal region SMD44_RS06730 PF01968 Hydantoinase/oxoprolinase SMD44_RS06755 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS06755 PF14759 Reductase C-terminal SMD44_RS06765 PF09339 IclR helix-turn-helix domain SMD44_RS06765 PF01614 Bacterial transcriptional regulator SMD44_RS06770 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS06770 PF00107 Zinc-binding dehydrogenase SMD44_RS06775 PF16350 FAD dependent oxidoreductase central domain SMD44_RS06775 PF01266 FAD dependent oxidoreductase SMD44_RS06775 PF08669 Glycine cleavage T-protein C-terminal barrel domain SMD44_RS06775 PF01571 Aminomethyltransferase folate-binding domain SMD44_RS06780 PF01266 FAD dependent oxidoreductase SMD44_RS06785 PF00355 Rieske [2Fe-2S] domain SMD44_RS06785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) SMD44_RS06810 PF07690 Major Facilitator Superfamily SMD44_RS06815 PF07286 Protein of unknown function (DUF1445) SMD44_RS06820 PF03746 LamB/YcsF family SMD44_RS06825 PF02682 Carboxyltransferase domain, subdomain C and D SMD44_RS06830 PF02626 Carboxyltransferase domain, subdomain A and B SMD44_RS06840 PF00534 Glycosyl transferases group 1 SMD44_RS06840 PF13579 Glycosyl transferase 4-like domain SMD44_RS06845 PF13439 Glycosyltransferase Family 4 SMD44_RS06845 PF00534 Glycosyl transferases group 1 SMD44_RS06870 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS06870 PF00155 Aminotransferase class I and II SMD44_RS06885 PF13397 RNA polymerase-binding protein SMD44_RS06895 PF04186 FxsA cytoplasmic membrane protein SMD44_RS06900 PF00535 Glycosyl transferase family 2 SMD44_RS06910 PF01037 Lrp/AsnC ligand binding domain SMD44_RS06920 PF01636 Phosphotransferase enzyme family SMD44_RS06935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS06935 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS06935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS06940 PF00041 Fibronectin type III domain SMD44_RS06940 PF00704 Glycosyl hydrolases family 18 SMD44_RS06940 PF00553 Cellulose binding domain SMD44_RS06945 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS06980 PF17866 AAA lid domain SMD44_RS06980 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS06990 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS06990 PF03471 Transporter associated domain SMD44_RS06990 PF00571 CBS domain SMD44_RS07000 PF01634 ATP phosphoribosyltransferase SMD44_RS07000 PF08029 HisG, C-terminal domain SMD44_RS07005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMD44_RS07010 PF00885 6,7-dimethyl-8-ribityllumazine synthase SMD44_RS07015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SMD44_RS07015 PF00925 GTP cyclohydrolase II SMD44_RS07020 PF04973 Nicotinamide mononucleotide transporter SMD44_RS07025 PF00677 Lumazine binding domain SMD44_RS07040 PF00704 Glycosyl hydrolases family 18 SMD44_RS07040 PF06483 Chitinase C SMD44_RS07050 PF07690 Major Facilitator Superfamily SMD44_RS07060 PF00860 Permease family SMD44_RS07070 PF00296 Luciferase-like monooxygenase SMD44_RS07075 PF01593 Flavin containing amine oxidoreductase SMD44_RS07080 PF00795 Carbon-nitrogen hydrolase SMD44_RS07095 PF13520 Amino acid permease SMD44_RS07125 PF00668 Condensation domain SMD44_RS07125 PF00550 Phosphopantetheine attachment site SMD44_RS07125 PF00501 AMP-binding enzyme SMD44_RS07125 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS07130 PF00067 Cytochrome P450 SMD44_RS07135 PF00891 O-methyltransferase domain SMD44_RS07140 PF00891 O-methyltransferase domain SMD44_RS07145 PF00067 Cytochrome P450 SMD44_RS07150 PF00571 CBS domain SMD44_RS07150 PF00478 IMP dehydrogenase / GMP reductase domain SMD44_RS07165 PF04198 Putative sugar-binding domain SMD44_RS07170 PF00834 Ribulose-phosphate 3 epimerase family SMD44_RS07175 PF03176 MMPL family SMD44_RS07180 PF04542 Sigma-70 region 2 SMD44_RS07180 PF08281 Sigma-70, region 4 SMD44_RS07185 PF03795 YCII-related domain SMD44_RS07195 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS07200 PF01189 16S rRNA methyltransferase RsmB/F SMD44_RS07200 PF01029 NusB family SMD44_RS07205 PF02911 Formyl transferase, C-terminal domain SMD44_RS07205 PF00551 Formyl transferase SMD44_RS07215 PF17764 3′ DNA-binding domain (3′BD) SMD44_RS07220 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMD44_RS07220 PF02772 S-adenosylmethionine synthetase, central domain SMD44_RS07220 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMD44_RS07225 PF04127 DNA / pantothenate metabolism flavoprotein SMD44_RS07225 PF02441 Flavoprotein SMD44_RS07230 PF01192 RNA polymerase Rpb6 SMD44_RS07235 PF00625 Guanylate kinase SMD44_RS07245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMD44_RS07250 PF01180 Dihydroorotate dehydrogenase SMD44_RS07255 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SMD44_RS07255 PF02142 MGS-like domain SMD44_RS07255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMD44_RS07260 PF00117 Glutamine amidotransferase class-I SMD44_RS07260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SMD44_RS07270 PF01979 Amidohydrolase family SMD44_RS07275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMD44_RS07275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMD44_RS07280 PF00156 Phosphoribosyl transferase domain SMD44_RS07290 PF01029 NusB family SMD44_RS07295 PF09285 Elongation factor P, C-terminal SMD44_RS07295 PF01132 Elongation factor P (EF-P) OB domain SMD44_RS07295 PF08207 Elongation factor P (EF-P) KOW-like domain SMD44_RS07300 PF00557 Metallopeptidase family M24 SMD44_RS07300 PF01321 Creatinase/Prolidase N-terminal domain SMD44_RS07315 PF01761 3-dehydroquinate synthase SMD44_RS07320 PF01202 Shikimate kinase SMD44_RS07325 PF01264 Chorismate synthase SMD44_RS07330 PF01488 Shikimate / quinate 5-dehydrogenase SMD44_RS07330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SMD44_RS07330 PF08501 Shikimate dehydrogenase substrate binding domain SMD44_RS07335 PF02618 YceG-like family SMD44_RS07340 PF03652 Holliday junction resolvase SMD44_RS07345 PF02272 DHHA1 domain SMD44_RS07345 PF01411 tRNA synthetases class II (A) SMD44_RS07345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMD44_RS07360 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS07365 PF01479 S4 domain SMD44_RS07365 PF00163 Ribosomal protein S4/S9 N-terminal domain SMD44_RS07370 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS07370 PF16193 AAA C-terminal domain SMD44_RS07370 PF12002 MgsA AAA+ ATPase C terminal SMD44_RS07380 PF00005 ABC transporter SMD44_RS07390 PF07730 Histidine kinase SMD44_RS07395 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS07395 PF00072 Response regulator receiver domain SMD44_RS07400 PF13393 Histidyl-tRNA synthetase SMD44_RS07400 PF03129 Anticodon binding domain SMD44_RS07405 PF00753 Metallo-beta-lactamase superfamily SMD44_RS07410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMD44_RS07415 PF03993 Domain of Unknown Function (DUF349) SMD44_RS07420 PF02824 TGS domain SMD44_RS07420 PF04607 Region found in RelA / SpoT proteins SMD44_RS07420 PF13291 ACT domain SMD44_RS07430 PF07549 SecD/SecF GG Motif SMD44_RS07430 PF02355 Protein export membrane protein SMD44_RS07435 PF07549 SecD/SecF GG Motif SMD44_RS07435 PF02355 Protein export membrane protein SMD44_RS07445 PF17864 RuvB AAA lid domain SMD44_RS07445 PF05491 RuvB C-terminal winged helix domain SMD44_RS07445 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMD44_RS07450 PF01330 RuvA N terminal domain SMD44_RS07450 PF07499 RuvA, C-terminal domain SMD44_RS07460 PF01709 Transcriptional regulator SMD44_RS07465 PF01174 SNO glutamine amidotransferase family SMD44_RS07470 PF01680 SOR/SNZ family SMD44_RS07485 PF13439 Glycosyltransferase Family 4 SMD44_RS07490 PF03279 Bacterial lipid A biosynthesis acyltransferase SMD44_RS07495 PF01066 CDP-alcohol phosphatidyltransferase SMD44_RS07510 PF01230 HIT domain SMD44_RS07520 PF03129 Anticodon binding domain SMD44_RS07520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMD44_RS07520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS07535 PF00929 Exonuclease SMD44_RS07560 PF04686 Streptomyces sporulation and cell division protein, SsgA SMD44_RS07595 PF00425 chorismate binding enzyme SMD44_RS07595 PF04715 Anthranilate synthase component I, N terminal region SMD44_RS07645 PF00069 Protein kinase domain SMD44_RS07645 PF00400 WD domain, G-beta repeat SMD44_RS07650 PF00588 SpoU rRNA Methylase family SMD44_RS07655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS07655 PF10414 Sirohaem synthase dimerisation region SMD44_RS07655 PF14824 Sirohaem biosynthesis protein central SMD44_RS07660 PF02277 Phosphoribosyltransferase SMD44_RS07665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS07675 PF03180 NLPA lipoprotein SMD44_RS07680 PF03180 NLPA lipoprotein SMD44_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS07690 PF09383 NIL domain SMD44_RS07690 PF00005 ABC transporter SMD44_RS07695 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS07720 PF03009 Glycerophosphoryl diester phosphodiesterase family SMD44_RS07725 PF00501 AMP-binding enzyme SMD44_RS07725 PF01553 Acyltransferase SMD44_RS07730 PF07690 Major Facilitator Superfamily SMD44_RS07745 PF00206 Lyase SMD44_RS07745 PF14698 Argininosuccinate lyase C-terminal SMD44_RS07750 PF00764 Arginosuccinate synthase SMD44_RS07775 PF01758 Sodium Bile acid symporter family SMD44_RS07780 PF00183 Hsp90 protein SMD44_RS07785 PF01316 Arginine repressor, DNA binding domain SMD44_RS07785 PF02863 Arginine repressor, C-terminal domain SMD44_RS07790 PF00202 Aminotransferase class-III SMD44_RS07795 PF00696 Amino acid kinase family SMD44_RS07800 PF01960 ArgJ family SMD44_RS07805 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMD44_RS07805 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMD44_RS07810 PF03971 Monomeric isocitrate dehydrogenase SMD44_RS07815 PF13411 MerR HTH family regulatory protein SMD44_RS07820 PF00106 short chain dehydrogenase SMD44_RS07825 PF00561 alpha/beta hydrolase fold SMD44_RS07830 PF00248 Aldo/keto reductase family SMD44_RS07855 PF00892 EamA-like transporter family SMD44_RS07865 PF02638 Glycosyl hydrolase-like 10 SMD44_RS07870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS07870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS07895 PF03147 Ferredoxin-fold anticodon binding domain SMD44_RS07895 PF03483 B3/4 domain SMD44_RS07895 PF01588 Putative tRNA binding domain SMD44_RS07895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SMD44_RS07895 PF03484 tRNA synthetase B5 domain SMD44_RS07900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SMD44_RS07900 PF01409 tRNA synthetases class II core domain (F) SMD44_RS07905 PF18698 Histidine kinase sensor domain SMD44_RS07905 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS07905 PF00989 PAS fold SMD44_RS07905 PF00672 HAMP domain SMD44_RS07910 PF00588 SpoU rRNA Methylase family SMD44_RS07910 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMD44_RS07915 PF00453 Ribosomal protein L20 SMD44_RS07920 PF01632 Ribosomal protein L35 SMD44_RS07925 PF05198 Translation initiation factor IF-3, N-terminal domain SMD44_RS07925 PF00707 Translation initiation factor IF-3, C-terminal domain SMD44_RS07940 PF00082 Subtilase family SMD44_RS07975 PF00171 Aldehyde dehydrogenase family SMD44_RS07980 PF00120 Glutamine synthetase, catalytic domain SMD44_RS07980 PF03951 Glutamine synthetase, beta-Grasp domain SMD44_RS07985 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS07985 PF07729 FCD domain SMD44_RS07990 PF13520 Amino acid permease SMD44_RS07995 PF07722 Peptidase C26 SMD44_RS08010 PF01174 SNO glutamine amidotransferase family SMD44_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS08025 PF00571 CBS domain SMD44_RS08025 PF00005 ABC transporter SMD44_RS08030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMD44_RS08030 PF01367 5'-3' exonuclease, C-terminal SAM fold SMD44_RS08035 PF08021 Siderophore-interacting FAD-binding domain SMD44_RS08035 PF04954 Siderophore-interacting protein SMD44_RS08045 PF00849 RNA pseudouridylate synthase SMD44_RS08050 PF00067 Cytochrome P450 SMD44_RS08075 PF08148 DSHCT (NUC185) domain SMD44_RS08075 PF00270 DEAD/DEAH box helicase SMD44_RS08075 PF00271 Helicase conserved C-terminal domain SMD44_RS08080 PF00781 Diacylglycerol kinase catalytic domain SMD44_RS08085 PF00902 Sec-independent protein translocase protein (TatC) SMD44_RS08090 PF02416 mttA/Hcf106 family SMD44_RS08110 PF13280 WYL domain SMD44_RS08115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMD44_RS08125 PF03136 Pup-ligase protein SMD44_RS08135 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS08140 PF00227 Proteasome subunit SMD44_RS08145 PF00227 Proteasome subunit SMD44_RS08155 PF05639 Pup-like protein SMD44_RS08160 PF03136 Pup-ligase protein SMD44_RS08165 PF16450 Proteasomal ATPase OB C-terminal domain SMD44_RS08165 PF17758 Proteasomal ATPase OB N-terminal domain SMD44_RS08165 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS08185 PF08704 tRNA methyltransferase complex GCD14 subunit SMD44_RS08190 PF02163 Peptidase family M50 SMD44_RS08190 PF00571 CBS domain SMD44_RS08200 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS08200 PF00072 Response regulator receiver domain SMD44_RS08205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS08210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS08220 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS08225 PF02574 Homocysteine S-methyltransferase SMD44_RS08225 PF02965 Vitamin B12 dependent methionine synthase, activation domain SMD44_RS08225 PF02310 B12 binding domain SMD44_RS08225 PF00809 Pterin binding enzyme SMD44_RS08225 PF02607 B12 binding domain SMD44_RS08230 PF09339 IclR helix-turn-helix domain SMD44_RS08230 PF01614 Bacterial transcriptional regulator SMD44_RS08235 PF00230 Major intrinsic protein SMD44_RS08240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMD44_RS08240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SMD44_RS08245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SMD44_RS08245 PF01266 FAD dependent oxidoreductase SMD44_RS08260 PF01979 Amidohydrolase family SMD44_RS08265 PF00174 Oxidoreductase molybdopterin binding domain SMD44_RS08270 PF00970 Oxidoreductase FAD-binding domain SMD44_RS08270 PF00175 Oxidoreductase NAD-binding domain SMD44_RS08270 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS08275 PF07729 FCD domain SMD44_RS08275 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS08295 PF01406 tRNA synthetases class I (C) catalytic domain SMD44_RS08310 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS08315 PF01544 CorA-like Mg2+ transporter protein SMD44_RS08325 PF00296 Luciferase-like monooxygenase SMD44_RS08330 PF00248 Aldo/keto reductase family SMD44_RS08355 PF03777 ChpA-C SMD44_RS08360 PF03777 ChpA-C SMD44_RS08365 PF07687 Peptidase dimerisation domain SMD44_RS08365 PF01546 Peptidase family M20/M25/M40 SMD44_RS08430 PF00199 Catalase SMD44_RS08455 PF02447 GntP family permease SMD44_RS08465 PF00174 Oxidoreductase molybdopterin binding domain SMD44_RS08480 PF00890 FAD binding domain SMD44_RS08485 PF00293 NUDIX domain SMD44_RS08490 PF02656 Domain of unknown function (DUF202) SMD44_RS08500 PF08990 Erythronolide synthase docking SMD44_RS08500 PF00550 Phosphopantetheine attachment site SMD44_RS08500 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS08500 PF08659 KR domain SMD44_RS08500 PF00698 Acyl transferase domain SMD44_RS08500 PF14765 Polyketide synthase dehydratase SMD44_RS08500 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS08500 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS08500 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS08510 PF01636 Phosphotransferase enzyme family SMD44_RS08515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS08515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS08515 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS08520 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS08520 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS08530 PF05139 Erythromycin esterase SMD44_RS08530 PF00156 Phosphoribosyl transferase domain SMD44_RS08570 PF09278 MerR, DNA binding SMD44_RS08570 PF00376 MerR family regulatory protein SMD44_RS08575 PF01575 MaoC like domain SMD44_RS08585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS08585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS08585 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS08595 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS08595 PF00107 Zinc-binding dehydrogenase SMD44_RS08600 PF00171 Aldehyde dehydrogenase family SMD44_RS08615 PF03600 Citrate transporter SMD44_RS08620 PF01568 Molydopterin dinucleotide binding domain SMD44_RS08620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMD44_RS08620 PF00384 Molybdopterin oxidoreductase SMD44_RS08630 PF04209 homogentisate 1,2-dioxygenase SMD44_RS08635 PF07702 UTRA domain SMD44_RS08635 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS08645 PF07690 Major Facilitator Superfamily SMD44_RS08650 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS08650 PF00107 Zinc-binding dehydrogenase SMD44_RS08655 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS08655 PF00107 Zinc-binding dehydrogenase SMD44_RS08660 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS08660 PF00072 Response regulator receiver domain SMD44_RS08670 PF10099 Anti-sigma-K factor rskA SMD44_RS08675 PF04542 Sigma-70 region 2 SMD44_RS08675 PF04545 Sigma-70, region 4 SMD44_RS08690 PF03824 High-affinity nickel-transport protein SMD44_RS08695 PF03793 PASTA domain SMD44_RS08695 PF00069 Protein kinase domain SMD44_RS08700 PF13472 GDSL-like Lipase/Acylhydrolase family SMD44_RS08715 PF00535 Glycosyl transferase family 2 SMD44_RS08745 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS08760 PF13847 Methyltransferase domain SMD44_RS08760 PF03551 Transcriptional regulator PadR-like family SMD44_RS08775 PF01970 Tripartite tricarboxylate transporter TctA family SMD44_RS08790 PF00072 Response regulator receiver domain SMD44_RS08790 PF12431 Transcriptional regulator SMD44_RS08790 PF08279 HTH domain SMD44_RS08795 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SMD44_RS08795 PF18416 N-acetylglucosamine binding protein domain 2 SMD44_RS08800 PF01674 Lipase (class 2) SMD44_RS08820 PF02811 PHP domain SMD44_RS08820 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMD44_RS08820 PF14579 Helix-hairpin-helix motif SMD44_RS08820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMD44_RS08830 PF01494 FAD binding domain SMD44_RS08835 PF00072 Response regulator receiver domain SMD44_RS08835 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS08840 PF07730 Histidine kinase SMD44_RS08845 PF03176 MMPL family SMD44_RS08860 PF00171 Aldehyde dehydrogenase family SMD44_RS08860 PF00465 Iron-containing alcohol dehydrogenase SMD44_RS08865 PF00720 Subtilisin inhibitor-like SMD44_RS08875 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS08875 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS08875 PF03413 Peptidase propeptide and YPEB domain SMD44_RS08875 PF07504 Fungalysin/Thermolysin Propeptide Motif SMD44_RS08880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS08880 PF00005 ABC transporter SMD44_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS08890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS08895 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS08900 PF02983 Alpha-lytic protease prodomain SMD44_RS08900 PF00089 Trypsin SMD44_RS08905 PF00089 Trypsin SMD44_RS08905 PF02983 Alpha-lytic protease prodomain SMD44_RS08915 PF00296 Luciferase-like monooxygenase SMD44_RS08920 PF00296 Luciferase-like monooxygenase SMD44_RS08930 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS08935 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS08945 PF04472 Cell division protein SepF SMD44_RS08950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS08950 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS08950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS08955 PF07690 Major Facilitator Superfamily SMD44_RS08965 PF01569 PAP2 superfamily SMD44_RS08975 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMD44_RS08985 PF00534 Glycosyl transferases group 1 SMD44_RS08985 PF09318 Glycosyl transferase 1 domain A SMD44_RS09010 PF00005 ABC transporter SMD44_RS09015 PF06737 Transglycosylase-like domain SMD44_RS09015 PF07501 G5 domain SMD44_RS09015 PF03990 G5-linked-Ubiquitin-like domain SMD44_RS09020 PF06737 Transglycosylase-like domain SMD44_RS09020 PF11574 Protein of unknown function (DUF3235) SMD44_RS09035 PF01926 50S ribosome-binding GTPase SMD44_RS09035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SMD44_RS09045 PF02224 Cytidylate kinase SMD44_RS09050 PF02153 Prephenate dehydrogenase SMD44_RS09085 PF10127 RNA repair pathway DNA polymerase beta family SMD44_RS09090 PF00849 RNA pseudouridylate synthase SMD44_RS09090 PF01479 S4 domain SMD44_RS09095 PF04079 Segregation and condensation complex subunit ScpB SMD44_RS09100 PF02616 Segregation and condensation protein ScpA SMD44_RS09110 PF13614 AAA domain SMD44_RS09115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SMD44_RS09115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SMD44_RS09125 PF00293 NUDIX domain SMD44_RS09130 PF00117 Glutamine amidotransferase class-I SMD44_RS09130 PF06418 CTP synthase N-terminus SMD44_RS09135 PF00723 Glycosyl hydrolases family 15 SMD44_RS09145 PF13439 Glycosyltransferase Family 4 SMD44_RS09145 PF00534 Glycosyl transferases group 1 SMD44_RS09155 PF02463 RecF/RecN/SMC N terminal domain SMD44_RS09165 PF01513 ATP-NAD kinase SMD44_RS09170 PF01479 S4 domain SMD44_RS09170 PF01728 FtsJ-like methyltransferase SMD44_RS09185 PF00005 ABC transporter SMD44_RS09190 PF01032 FecCD transport family SMD44_RS09195 PF01032 FecCD transport family SMD44_RS09210 PF04954 Siderophore-interacting protein SMD44_RS09210 PF08021 Siderophore-interacting FAD-binding domain SMD44_RS09215 PF18407 GCN5-related N-acetyltransferase like domain SMD44_RS09215 PF13344 Haloacid dehalogenase-like hydrolase SMD44_RS09255 PF02245 Methylpurine-DNA glycosylase (MPG) SMD44_RS09265 PF01161 Phosphatidylethanolamine-binding protein SMD44_RS09275 PF01145 SPFH domain / Band 7 family SMD44_RS09285 PF00005 ABC transporter SMD44_RS09295 PF03777 ChpA-C SMD44_RS09300 PF03777 ChpA-C SMD44_RS09305 PF00072 Response regulator receiver domain SMD44_RS09305 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS09310 PF07730 Histidine kinase SMD44_RS09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS09310 PF05384 Sensor protein DegS SMD44_RS09320 PF01061 ABC-2 type transporter SMD44_RS09320 PF00498 FHA domain SMD44_RS09320 PF00005 ABC transporter SMD44_RS09355 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS09355 PF07729 FCD domain SMD44_RS09385 PF00579 tRNA synthetases class I (W and Y) SMD44_RS09390 PF04226 Transglycosylase associated protein SMD44_RS09405 PF06463 Molybdenum Cofactor Synthesis C SMD44_RS09405 PF04055 Radical SAM superfamily SMD44_RS09410 PF00474 Sodium:solute symporter family SMD44_RS09420 PF05922 Peptidase inhibitor I9 SMD44_RS09420 PF00082 Subtilase family SMD44_RS09425 PF00082 Subtilase family SMD44_RS09425 PF05922 Peptidase inhibitor I9 SMD44_RS09435 PF02515 CoA-transferase family III SMD44_RS09450 PF04116 Fatty acid hydroxylase superfamily SMD44_RS09470 PF00106 short chain dehydrogenase SMD44_RS09480 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS09480 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS09485 PF01653 NAD-dependent DNA ligase adenylation domain SMD44_RS09485 PF00533 BRCA1 C Terminus (BRCT) domain SMD44_RS09485 PF03120 NAD-dependent DNA ligase OB-fold domain SMD44_RS09500 PF00723 Glycosyl hydrolases family 15 SMD44_RS09530 PF03780 Asp23 family, cell envelope-related function SMD44_RS09540 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS09550 PF00005 ABC transporter SMD44_RS09550 PF16326 ABC transporter C-terminal domain SMD44_RS09550 PF12848 ABC transporter SMD44_RS09555 PF04228 Putative neutral zinc metallopeptidase SMD44_RS09570 PF00561 alpha/beta hydrolase fold SMD44_RS09575 PF00596 Class II Aldolase and Adducin N-terminal domain SMD44_RS09580 PF01384 Phosphate transporter family SMD44_RS09605 PF03186 CobD/Cbib protein SMD44_RS09615 PF02514 CobN/Magnesium Chelatase SMD44_RS09620 PF07728 AAA domain (dynein-related subfamily) SMD44_RS09620 PF13519 von Willebrand factor type A domain SMD44_RS09620 PF17863 AAA lid domain SMD44_RS09625 PF12557 Cob(I)alamin adenosyltransferase N terminal SMD44_RS09625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP SMD44_RS09630 PF07685 CobB/CobQ-like glutamine amidotransferase domain SMD44_RS09630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SMD44_RS09635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS09645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS09650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS09655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS09660 PF02570 Precorrin-8X methylmutase SMD44_RS09665 PF01903 CbiX SMD44_RS09670 PF00155 Aminotransferase class I and II SMD44_RS09680 PF00884 Sulfatase SMD44_RS09680 PF12411 Choline sulfatase enzyme C terminal SMD44_RS09685 PF01979 Amidohydrolase family SMD44_RS09690 PF00266 Aminotransferase class-V SMD44_RS09695 PF00583 Acetyltransferase (GNAT) family SMD44_RS09700 PF00202 Aminotransferase class-III SMD44_RS09705 PF06339 Ectoine synthase SMD44_RS09710 PF05721 Phytanoyl-CoA dioxygenase (PhyH) SMD44_RS09715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMD44_RS09720 PF01047 MarR family SMD44_RS09725 PF00266 Aminotransferase class-V SMD44_RS09735 PF01638 HxlR-like helix-turn-helix SMD44_RS09750 PF00171 Aldehyde dehydrogenase family SMD44_RS09755 PF09339 IclR helix-turn-helix domain SMD44_RS09755 PF01614 Bacterial transcriptional regulator SMD44_RS09765 PF07730 Histidine kinase SMD44_RS09770 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS09770 PF00072 Response regulator receiver domain SMD44_RS09775 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS09785 PF03551 Transcriptional regulator PadR-like family SMD44_RS09795 PF00920 Dehydratase family SMD44_RS09815 PF05576 PS-10 peptidase S37 SMD44_RS09825 PF00701 Dihydrodipicolinate synthetase family SMD44_RS09830 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS09835 PF12695 Alpha/beta hydrolase family SMD44_RS09840 PF00455 DeoR C terminal sensor domain SMD44_RS09840 PF08220 DeoR-like helix-turn-helix domain SMD44_RS09850 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS09860 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS09860 PF16912 Glucose dehydrogenase C-terminus SMD44_RS09870 PF02342 TerD domain SMD44_RS09880 PF00069 Protein kinase domain SMD44_RS09880 PF00400 WD domain, G-beta repeat SMD44_RS09930 PF03992 Antibiotic biosynthesis monooxygenase SMD44_RS09940 PF00701 Dihydrodipicolinate synthetase family SMD44_RS09950 PF08281 Sigma-70, region 4 SMD44_RS09950 PF04542 Sigma-70 region 2 SMD44_RS09960 PF14602 Hexapeptide repeat of succinyl-transferase SMD44_RS09960 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle SMD44_RS09970 PF01638 HxlR-like helix-turn-helix SMD44_RS09975 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS09980 PF00893 Small Multidrug Resistance protein SMD44_RS09985 PF01883 Iron-sulfur cluster assembly protein SMD44_RS09990 PF01592 NifU-like N terminal domain SMD44_RS09995 PF00266 Aminotransferase class-V SMD44_RS10000 PF00005 ABC transporter SMD44_RS10005 PF00355 Rieske [2Fe-2S] domain SMD44_RS10010 PF01458 Uncharacterized protein family (UPF0051) SMD44_RS10015 PF01458 Uncharacterized protein family (UPF0051) SMD44_RS10025 PF02522 Aminoglycoside 3-N-acetyltransferase SMD44_RS10030 PF00005 ABC transporter SMD44_RS10040 PF02628 Cytochrome oxidase assembly protein SMD44_RS10055 PF00501 AMP-binding enzyme SMD44_RS10055 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS10060 PF01040 UbiA prenyltransferase family SMD44_RS10065 PF02779 Transketolase, pyrimidine binding domain SMD44_RS10065 PF02780 Transketolase, C-terminal domain SMD44_RS10065 PF00456 Transketolase, thiamine diphosphate binding domain SMD44_RS10070 PF00923 Transaldolase/Fructose-6-phosphate aldolase SMD44_RS10075 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SMD44_RS10075 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SMD44_RS10085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMD44_RS10095 PF00342 Phosphoglucose isomerase SMD44_RS10110 PF03840 Preprotein translocase SecG subunit SMD44_RS10115 PF00121 Triosephosphate isomerase SMD44_RS10120 PF00162 Phosphoglycerate kinase SMD44_RS10125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SMD44_RS10125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SMD44_RS10130 PF00246 Zinc carboxypeptidase SMD44_RS10135 PF02650 WhiA C-terminal HTH domain SMD44_RS10135 PF14527 WhiA LAGLIDADG-like domain SMD44_RS10135 PF10298 WhiA N-terminal LAGLIDADG-like domain SMD44_RS10140 PF01933 Uncharacterised protein family UPF0052 SMD44_RS10145 PF03668 P-loop ATPase protein family SMD44_RS10175 PF00294 pfkB family carbohydrate kinase SMD44_RS10185 PF04264 YceI-like domain SMD44_RS10190 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS10195 PF17760 UvrA interaction domain SMD44_RS10195 PF00005 ABC transporter SMD44_RS10195 PF17755 UvrA DNA-binding domain SMD44_RS10205 PF00753 Metallo-beta-lactamase superfamily SMD44_RS10210 PF01220 Dehydroquinase class II SMD44_RS10215 PF02016 LD-carboxypeptidase N-terminal domain SMD44_RS10215 PF17676 LD-carboxypeptidase C-terminal domain SMD44_RS10220 PF07690 Major Facilitator Superfamily SMD44_RS10220 PF00083 Sugar (and other) transporter SMD44_RS10225 PF01699 Sodium/calcium exchanger protein SMD44_RS10230 PF03741 Integral membrane protein TerC family SMD44_RS10235 PF02342 TerD domain SMD44_RS10240 PF02342 TerD domain SMD44_RS10250 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS10250 PF00563 EAL domain SMD44_RS10250 PF03707 Bacterial signalling protein N terminal repeat SMD44_RS10255 PF03009 Glycerophosphoryl diester phosphodiesterase family SMD44_RS10260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMD44_RS10260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMD44_RS10275 PF04227 Indigoidine synthase A like protein SMD44_RS10280 PF00294 pfkB family carbohydrate kinase SMD44_RS10280 PF01467 Cytidylyltransferase-like SMD44_RS10285 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS10290 PF01544 CorA-like Mg2+ transporter protein SMD44_RS10295 PF00571 CBS domain SMD44_RS10315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMD44_RS10315 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS10355 PF00067 Cytochrome P450 SMD44_RS10360 PF01979 Amidohydrolase family SMD44_RS10395 PF00176 SNF2 family N-terminal domain SMD44_RS10395 PF12419 SNF2 Helicase protein SMD44_RS10395 PF00271 Helicase conserved C-terminal domain SMD44_RS10405 PF00149 Calcineurin-like phosphoesterase SMD44_RS10430 PF00553 Cellulose binding domain SMD44_RS10430 PF01341 Glycosyl hydrolases family 6 SMD44_RS10435 PF00561 alpha/beta hydrolase fold SMD44_RS10440 PF03606 C4-dicarboxylate anaerobic carrier SMD44_RS10445 PF07687 Peptidase dimerisation domain SMD44_RS10445 PF01546 Peptidase family M20/M25/M40 SMD44_RS10475 PF01121 Dephospho-CoA kinase SMD44_RS10490 PF00575 S1 RNA binding domain SMD44_RS10495 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS10500 PF04408 Helicase associated domain (HA2) SMD44_RS10500 PF00270 DEAD/DEAH box helicase SMD44_RS10500 PF08482 ATP-dependent helicase C-terminal SMD44_RS10500 PF00271 Helicase conserved C-terminal domain SMD44_RS10515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMD44_RS10515 PF01367 5'-3' exonuclease, C-terminal SAM fold SMD44_RS10515 PF00476 DNA polymerase family A SMD44_RS10520 PF01568 Molydopterin dinucleotide binding domain SMD44_RS10520 PF00384 Molybdopterin oxidoreductase SMD44_RS10525 PF03061 Thioesterase superfamily SMD44_RS10535 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS10540 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS10540 PF11862 Domain of unknown function (DUF3382) SMD44_RS10545 PF12399 Branched-chain amino acid ATP-binding cassette transporter SMD44_RS10545 PF00005 ABC transporter SMD44_RS10550 PF00005 ABC transporter SMD44_RS10555 PF03861 ANTAR domain SMD44_RS10555 PF00072 Response regulator receiver domain SMD44_RS10565 PF02887 Pyruvate kinase, alpha/beta domain SMD44_RS10565 PF00224 Pyruvate kinase, barrel domain SMD44_RS10575 PF02872 5'-nucleotidase, C-terminal domain SMD44_RS10575 PF00149 Calcineurin-like phosphoesterase SMD44_RS10585 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SMD44_RS10595 PF01301 Glycosyl hydrolases family 35 SMD44_RS10605 PF01817 Chorismate mutase type II SMD44_RS10605 PF02153 Prephenate dehydrogenase SMD44_RS10610 PF01433 Peptidase family M1 domain SMD44_RS10610 PF11838 ERAP1-like C-terminal domain SMD44_RS10620 PF12905 Endo-alpha-N-acetylgalactosaminidase SMD44_RS10620 PF17974 Galactose-binding domain-like SMD44_RS10620 PF18080 Galactose mutarotase-like fold domain SMD44_RS10620 PF08305 NPCBM/NEW2 domain SMD44_RS10620 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase SMD44_RS10620 PF17451 Glycosyl hydrolase 101 beta sandwich domain SMD44_RS10625 PF05231 MASE1 SMD44_RS10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS10625 PF07730 Histidine kinase SMD44_RS10630 PF00072 Response regulator receiver domain SMD44_RS10630 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS10635 PF00089 Trypsin SMD44_RS10645 PF00270 DEAD/DEAH box helicase SMD44_RS10645 PF00271 Helicase conserved C-terminal domain SMD44_RS10650 PF00313 'Cold-shock' DNA-binding domain SMD44_RS10655 PF07690 Major Facilitator Superfamily SMD44_RS10660 PF01047 MarR family SMD44_RS10665 PF13350 Tyrosine phosphatase family SMD44_RS10675 PF12697 Alpha/beta hydrolase family SMD44_RS10690 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS10695 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS10705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMD44_RS10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS10710 PF01645 Conserved region in glutamate synthase SMD44_RS10710 PF04898 Glutamate synthase central domain SMD44_RS10710 PF00310 Glutamine amidotransferases class-II SMD44_RS10710 PF01493 GXGXG motif SMD44_RS10720 PF03747 ADP-ribosylglycohydrolase SMD44_RS10740 PF00294 pfkB family carbohydrate kinase SMD44_RS10745 PF02515 CoA-transferase family III SMD44_RS10755 PF01790 Prolipoprotein diacylglyceryl transferase SMD44_RS10765 PF00290 Tryptophan synthase alpha chain SMD44_RS10770 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS10780 PF00218 Indole-3-glycerol phosphate synthase SMD44_RS10800 PF04715 Anthranilate synthase component I, N terminal region SMD44_RS10800 PF00425 chorismate binding enzyme SMD44_RS10805 PF01502 Phosphoribosyl-AMP cyclohydrolase SMD44_RS10815 PF14013 MT0933-like antitoxin protein SMD44_RS10830 PF00977 Histidine biosynthesis protein SMD44_RS10835 PF01042 Endoribonuclease L-PSP SMD44_RS10840 PF00977 Histidine biosynthesis protein SMD44_RS10845 PF00117 Glutamine amidotransferase class-I SMD44_RS10850 PF00475 Imidazoleglycerol-phosphate dehydratase SMD44_RS10855 PF00155 Aminotransferase class I and II SMD44_RS10860 PF00815 Histidinol dehydrogenase SMD44_RS10875 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS10875 PF05362 Lon protease (S16) C-terminal proteolytic domain SMD44_RS10875 PF02190 ATP-dependent protease La (LON) substrate-binding domain SMD44_RS10880 PF04073 Aminoacyl-tRNA editing domain SMD44_RS10895 PF13732 Domain of unknown function (DUF4162) SMD44_RS10895 PF00005 ABC transporter SMD44_RS10900 PF01936 NYN domain SMD44_RS10910 PF02811 PHP domain SMD44_RS10910 PF14579 Helix-hairpin-helix motif SMD44_RS10910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMD44_RS10910 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMD44_RS10930 PF09423 PhoD-like phosphatase SMD44_RS10930 PF16655 PhoD-like phosphatase, N-terminal domain SMD44_RS10935 PF00069 Protein kinase domain SMD44_RS10950 PF00999 Sodium/hydrogen exchanger family SMD44_RS10960 PF00849 RNA pseudouridylate synthase SMD44_RS10965 PF01252 Signal peptidase (SPase) II SMD44_RS10985 PF08264 Anticodon-binding domain of tRNA SMD44_RS10985 PF00133 tRNA synthetases class I (I, L, M and V) SMD44_RS10990 PF05103 DivIVA protein SMD44_RS11000 PF04472 Cell division protein SepF SMD44_RS11005 PF01168 Alanine racemase, N-terminal domain SMD44_RS11010 PF02578 Multi-copper polyphenol oxidoreductase laccase SMD44_RS11015 PF12327 FtsZ family, C-terminal domain SMD44_RS11015 PF00091 Tubulin/FtsZ family, GTPase domain SMD44_RS11025 PF08478 POTRA domain, FtsQ-type SMD44_RS11030 PF03033 Glycosyltransferase family 28 N-terminal domain SMD44_RS11030 PF04101 Glycosyltransferase family 28 C-terminal domain SMD44_RS11035 PF01098 Cell cycle protein SMD44_RS11040 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS11040 PF08245 Mur ligase middle domain SMD44_RS11045 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SMD44_RS11045 PF00953 Glycosyl transferase family 4 SMD44_RS11050 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS11050 PF08245 Mur ligase middle domain SMD44_RS11050 PF01225 Mur ligase family, catalytic domain SMD44_RS11055 PF08245 Mur ligase middle domain SMD44_RS11055 PF01225 Mur ligase family, catalytic domain SMD44_RS11055 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS11060 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS11060 PF03717 Penicillin-binding Protein dimerisation domain SMD44_RS11070 PF01795 MraW methylase family SMD44_RS11075 PF00484 Carbonic anhydrase SMD44_RS11080 PF07726 ATPase family associated with various cellular activities (AAA) SMD44_RS11080 PF17863 AAA lid domain SMD44_RS11110 PF00005 ABC transporter SMD44_RS11110 PF01061 ABC-2 type transporter SMD44_RS11110 PF00498 FHA domain SMD44_RS11120 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS11120 PF08359 YsiA-like protein, C-terminal region SMD44_RS11130 PF01593 Flavin containing amine oxidoreductase SMD44_RS11140 PF02219 Methylenetetrahydrofolate reductase SMD44_RS11145 PF02581 Thiamine monophosphate synthase SMD44_RS11155 PF14759 Reductase C-terminal SMD44_RS11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS11160 PF05690 Thiazole biosynthesis protein ThiG SMD44_RS11160 PF01266 FAD dependent oxidoreductase SMD44_RS11170 PF05690 Thiazole biosynthesis protein ThiG SMD44_RS11175 PF00069 Protein kinase domain SMD44_RS11175 PF03793 PASTA domain SMD44_RS11180 PF01261 Xylose isomerase-like TIM barrel SMD44_RS11185 PF00174 Oxidoreductase molybdopterin binding domain SMD44_RS11190 PF00210 Ferritin-like domain SMD44_RS11195 PF04324 BFD-like [2Fe-2S] binding domain SMD44_RS11195 PF00384 Molybdopterin oxidoreductase SMD44_RS11195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMD44_RS11195 PF01568 Molydopterin dinucleotide binding domain SMD44_RS11200 PF01474 Class-II DAHP synthetase family SMD44_RS11215 PF00425 chorismate binding enzyme SMD44_RS11215 PF00117 Glutamine amidotransferase class-I SMD44_RS11220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMD44_RS11220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS11225 PF00365 Phosphofructokinase SMD44_RS11230 PF00072 Response regulator receiver domain SMD44_RS11230 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS11235 PF00672 HAMP domain SMD44_RS11235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS11235 PF07730 Histidine kinase SMD44_RS11245 PF12146 Serine aminopeptidase, S33 SMD44_RS11260 PF00480 ROK family SMD44_RS11265 PF17230 Family of unknown function (DUF5304) SMD44_RS11270 PF02374 Anion-transporting ATPase SMD44_RS11270 PF17886 HSP20-like domain found in ArsA SMD44_RS11285 PF00501 AMP-binding enzyme SMD44_RS11290 PF00534 Glycosyl transferases group 1 SMD44_RS11290 PF13439 Glycosyltransferase Family 4 SMD44_RS11305 PF00877 NlpC/P60 family SMD44_RS11310 PF00877 NlpC/P60 family SMD44_RS11340 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS11340 PF00672 HAMP domain SMD44_RS11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS11345 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS11345 PF00072 Response regulator receiver domain SMD44_RS11355 PF02595 Glycerate kinase family SMD44_RS11360 PF00266 Aminotransferase class-V SMD44_RS11365 PF02885 Glycosyl transferase family, helical bundle domain SMD44_RS11365 PF00591 Glycosyl transferase family, a/b domain SMD44_RS11370 PF13631 Cytochrome b(N-terminal)/b6/petB SMD44_RS11375 PF00355 Rieske [2Fe-2S] domain SMD44_RS11380 PF00034 Cytochrome c SMD44_RS11380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III SMD44_RS11385 PF00510 Cytochrome c oxidase subunit III SMD44_RS11395 PF17964 Bacterial Ig domain SMD44_RS11395 PF03734 L,D-transpeptidase catalytic domain SMD44_RS11400 PF12270 Cytochrome c oxidase subunit IV SMD44_RS11405 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMD44_RS11410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SMD44_RS11415 PF00266 Aminotransferase class-V SMD44_RS11420 PF00294 pfkB family carbohydrate kinase SMD44_RS11435 PF01521 Iron-sulphur cluster biosynthesis SMD44_RS11440 PF02445 Quinolinate synthetase A protein SMD44_RS11445 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS11445 PF00072 Response regulator receiver domain SMD44_RS11450 PF07730 Histidine kinase SMD44_RS11465 PF11241 Protein of unknown function (DUF3043) SMD44_RS11475 PF13180 PDZ domain SMD44_RS11495 PF02277 Phosphoribosyltransferase SMD44_RS11500 PF00152 tRNA synthetases class II (D, K and N) SMD44_RS11500 PF09924 Uncharacterised conserved protein (DUF2156) SMD44_RS11500 PF16995 Transmembrane region of lysyl-tRNA synthetase SMD44_RS11500 PF01336 OB-fold nucleic acid binding domain SMD44_RS11515 PF02654 Cobalamin-5-phosphate synthase SMD44_RS11520 PF00883 Cytosol aminopeptidase family, catalytic domain SMD44_RS11520 PF02789 Cytosol aminopeptidase family, N-terminal domain SMD44_RS11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS11525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMD44_RS11530 PF02817 e3 binding domain SMD44_RS11530 PF00364 Biotin-requiring enzyme SMD44_RS11530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMD44_RS11535 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS11535 PF07729 FCD domain SMD44_RS11540 PF17831 Pyruvate dehydrogenase E1 component middle domain SMD44_RS11540 PF00456 Transketolase, thiamine diphosphate binding domain SMD44_RS11585 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS11585 PF08338 Domain of unknown function (DUF1731) SMD44_RS11590 PF01593 Flavin containing amine oxidoreductase SMD44_RS11610 PF04055 Radical SAM superfamily SMD44_RS11610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SMD44_RS11620 PF13829 Domain of unknown function (DUF4191) SMD44_RS11630 PF00120 Glutamine synthetase, catalytic domain SMD44_RS11630 PF03951 Glutamine synthetase, beta-Grasp domain SMD44_RS11635 PF02899 Phage integrase, N-terminal SAM-like domain SMD44_RS11635 PF00589 Phage integrase family SMD44_RS11660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMD44_RS11670 PF02417 Chromate transporter SMD44_RS11680 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMD44_RS11685 PF01022 Bacterial regulatory protein, arsR family SMD44_RS11690 PF13847 Methyltransferase domain SMD44_RS11710 PF00005 ABC transporter SMD44_RS11715 PF01032 FecCD transport family SMD44_RS11740 PF00710 Asparaginase, N-terminal SMD44_RS11740 PF17763 Glutaminase/Asparaginase C-terminal domain SMD44_RS11750 PF03960 ArsC family SMD44_RS11760 PF03951 Glutamine synthetase, beta-Grasp domain SMD44_RS11760 PF00120 Glutamine synthetase, catalytic domain SMD44_RS11770 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS11780 PF03176 MMPL family SMD44_RS11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS11785 PF07730 Histidine kinase SMD44_RS11785 PF13492 GAF domain SMD44_RS11790 PF00072 Response regulator receiver domain SMD44_RS11790 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS11825 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS11830 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS11835 PF07228 Stage II sporulation protein E (SpoIIE) SMD44_RS11835 PF08448 PAS fold SMD44_RS11835 PF13581 Histidine kinase-like ATPase domain SMD44_RS11835 PF13466 STAS domain SMD44_RS11840 PF00128 Alpha amylase, catalytic domain SMD44_RS11845 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS11855 PF08335 GlnD PII-uridylyltransferase SMD44_RS11855 PF03710 Glutamate-ammonia ligase adenylyltransferase SMD44_RS11870 PF00120 Glutamine synthetase, catalytic domain SMD44_RS11870 PF03951 Glutamine synthetase, beta-Grasp domain SMD44_RS11890 PF01842 ACT domain SMD44_RS11890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS11890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMD44_RS11895 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS11900 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS11910 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS11930 PF13520 Amino acid permease SMD44_RS11940 PF07731 Multicopper oxidase SMD44_RS11940 PF00394 Multicopper oxidase SMD44_RS11940 PF07732 Multicopper oxidase SMD44_RS11950 PF07690 Major Facilitator Superfamily SMD44_RS11960 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS11965 PF07690 Major Facilitator Superfamily SMD44_RS11970 PF02548 Ketopantoate hydroxymethyltransferase SMD44_RS11975 PF13732 Domain of unknown function (DUF4162) SMD44_RS11975 PF00005 ABC transporter SMD44_RS11980 PF01061 ABC-2 type transporter SMD44_RS11985 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS12005 PF04650 YSIRK type signal peptide SMD44_RS12005 PF02973 Sialidase, N-terminal domain SMD44_RS12005 PF13088 BNR repeat-like domain SMD44_RS12025 PF00557 Metallopeptidase family M24 SMD44_RS12030 PF01126 Heme oxygenase SMD44_RS12035 PF02567 Phenazine biosynthesis-like protein SMD44_RS12050 PF01497 Periplasmic binding protein SMD44_RS12060 PF00005 ABC transporter SMD44_RS12095 PF07690 Major Facilitator Superfamily SMD44_RS12110 PF16655 PhoD-like phosphatase, N-terminal domain SMD44_RS12110 PF09423 PhoD-like phosphatase SMD44_RS12125 PF02567 Phenazine biosynthesis-like protein SMD44_RS12170 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS12170 PF00931 NB-ARC domain SMD44_RS12170 PF03704 Bacterial transcriptional activator domain SMD44_RS12175 PF01613 Flavin reductase like domain SMD44_RS12180 PF00999 Sodium/hydrogen exchanger family SMD44_RS12185 PF04820 Tryptophan halogenase SMD44_RS12200 PF12833 Helix-turn-helix domain SMD44_RS12200 PF12852 Cupin SMD44_RS12215 PF17876 Cold shock domain SMD44_RS12215 PF00575 S1 RNA binding domain SMD44_RS12215 PF08206 Ribonuclease B OB domain SMD44_RS12215 PF00773 RNB domain SMD44_RS12220 PF03883 Peroxide stress protein YaaA SMD44_RS12225 PF01081 KDPG and KHG aldolase SMD44_RS12230 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS12230 PF13456 Reverse transcriptase-like SMD44_RS12240 PF01784 NIF3 (NGG1p interacting factor 3) SMD44_RS12245 PF01497 Periplasmic binding protein SMD44_RS12260 PF00106 short chain dehydrogenase SMD44_RS12265 PF00107 Zinc-binding dehydrogenase SMD44_RS12265 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS12270 PF01575 MaoC like domain SMD44_RS12275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS12275 PF07730 Histidine kinase SMD44_RS12280 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS12280 PF00072 Response regulator receiver domain SMD44_RS12285 PF07690 Major Facilitator Superfamily SMD44_RS12290 PF00108 Thiolase, N-terminal domain SMD44_RS12290 PF02803 Thiolase, C-terminal domain SMD44_RS12295 PF07690 Major Facilitator Superfamily SMD44_RS12315 PF00296 Luciferase-like monooxygenase SMD44_RS12360 PF08241 Methyltransferase domain SMD44_RS12365 PF00534 Glycosyl transferases group 1 SMD44_RS12365 PF13439 Glycosyltransferase Family 4 SMD44_RS12370 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS12370 PF17925 Tetracyclin repressor-like, C-terminal domain SMD44_RS12380 PF00171 Aldehyde dehydrogenase family SMD44_RS12390 PF00293 NUDIX domain SMD44_RS12425 PF13249 Squalene-hopene cyclase N-terminal domain SMD44_RS12425 PF13243 Squalene-hopene cyclase C-terminal domain SMD44_RS12440 PF00005 ABC transporter SMD44_RS12455 PF00108 Thiolase, N-terminal domain SMD44_RS12455 PF02803 Thiolase, C-terminal domain SMD44_RS12460 PF00067 Cytochrome P450 SMD44_RS12475 PF08946 Osmosensory transporter coiled coil SMD44_RS12475 PF00083 Sugar (and other) transporter SMD44_RS12480 PF01596 O-methyltransferase SMD44_RS12505 PF07690 Major Facilitator Superfamily SMD44_RS12560 PF01810 LysE type translocator SMD44_RS12580 PF02311 AraC-like ligand binding domain SMD44_RS12580 PF12833 Helix-turn-helix domain SMD44_RS12590 PF12833 Helix-turn-helix domain SMD44_RS12590 PF01965 DJ-1/PfpI family SMD44_RS12640 PF01081 KDPG and KHG aldolase SMD44_RS12645 PF00294 pfkB family carbohydrate kinase SMD44_RS12660 PF15608 PELOTA RNA binding domain SMD44_RS12660 PF11202 Phosphoribosyl transferase (PRTase) SMD44_RS12670 PF02342 TerD domain SMD44_RS12675 PF02342 TerD domain SMD44_RS12685 PF02342 TerD domain SMD44_RS12690 PF02342 TerD domain SMD44_RS12695 PF00578 AhpC/TSA family SMD44_RS12700 PF11253 Protein of unknown function (DUF3052) SMD44_RS12710 PF17831 Pyruvate dehydrogenase E1 component middle domain SMD44_RS12710 PF00456 Transketolase, thiamine diphosphate binding domain SMD44_RS12715 PF00520 Ion transport protein SMD44_RS12715 PF00027 Cyclic nucleotide-binding domain SMD44_RS12735 PF00248 Aldo/keto reductase family SMD44_RS12740 PF13411 MerR HTH family regulatory protein SMD44_RS12750 PF00144 Beta-lactamase SMD44_RS12755 PF02678 Pirin SMD44_RS12755 PF17954 Quercetinase C-terminal cupin domain SMD44_RS12760 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS12760 PF17853 GGDEF-like domain SMD44_RS12765 PF00698 Acyl transferase domain SMD44_RS12770 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS12770 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS12775 PF00550 Phosphopantetheine attachment site SMD44_RS12780 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS12780 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS12795 PF01042 Endoribonuclease L-PSP SMD44_RS12800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS12800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS12805 PF03466 LysR substrate binding domain SMD44_RS12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS12825 PF02566 OsmC-like protein SMD44_RS12830 PF00107 Zinc-binding dehydrogenase SMD44_RS12830 PF16884 N-terminal domain of oxidoreductase SMD44_RS12850 PF07905 Purine catabolism regulatory protein-like family SMD44_RS12850 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS12860 PF00534 Glycosyl transferases group 1 SMD44_RS12860 PF13439 Glycosyltransferase Family 4 SMD44_RS12865 PF08241 Methyltransferase domain SMD44_RS12870 PF11847 Alpha-(1->3)-arabinofuranosyltransferase SMD44_RS12880 PF03551 Transcriptional regulator PadR-like family SMD44_RS12880 PF13847 Methyltransferase domain SMD44_RS12925 PF00535 Glycosyl transferase family 2 SMD44_RS12930 PF00501 AMP-binding enzyme SMD44_RS12930 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS12945 PF04055 Radical SAM superfamily SMD44_RS12945 PF13186 Iron-sulfur cluster-binding domain SMD44_RS12960 PF05922 Peptidase inhibitor I9 SMD44_RS12960 PF00082 Subtilase family SMD44_RS12995 PF05977 Transmembrane secretion effector SMD44_RS13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS13005 PF13492 GAF domain SMD44_RS13005 PF13185 GAF domain SMD44_RS13005 PF13185 GAF domain SMD44_RS13005 PF13492 GAF domain SMD44_RS13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS13005 PF07730 Histidine kinase SMD44_RS13005 PF07730 Histidine kinase SMD44_RS13015 PF03459 TOBE domain SMD44_RS13015 PF00005 ABC transporter SMD44_RS13025 PF03459 TOBE domain SMD44_RS13045 PF01032 FecCD transport family SMD44_RS13050 PF00005 ABC transporter SMD44_RS13110 PF09344 CT1975-like protein SMD44_RS13125 PF18395 Cas3 C-terminal domain SMD44_RS13125 PF18019 HD domain SMD44_RS13125 PF00270 DEAD/DEAH box helicase SMD44_RS13190 PF02342 TerD domain SMD44_RS13200 PF02342 TerD domain SMD44_RS13225 PF03816 Cell envelope-related transcriptional attenuator domain SMD44_RS13240 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS13240 PF03471 Transporter associated domain SMD44_RS13240 PF00571 CBS domain SMD44_RS13245 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS13245 PF00571 CBS domain SMD44_RS13250 PF01757 Acyltransferase family SMD44_RS13280 PF09957 Bacterial antitoxin of type II TA system, VapB SMD44_RS13305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMD44_RS13305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SMD44_RS13310 PF00664 ABC transporter transmembrane region SMD44_RS13310 PF00005 ABC transporter SMD44_RS13315 PF00005 ABC transporter SMD44_RS13315 PF00664 ABC transporter transmembrane region SMD44_RS13320 PF04545 Sigma-70, region 4 SMD44_RS13320 PF04539 Sigma-70 region 3 SMD44_RS13320 PF04542 Sigma-70 region 2 SMD44_RS13320 PF00140 Sigma-70 factor, region 1.2 SMD44_RS13330 PF01807 CHC2 zinc finger SMD44_RS13330 PF10410 DnaB-helicase binding domain of primase SMD44_RS13330 PF08278 DNA primase DnaG DnaB-binding SMD44_RS13330 PF13662 Toprim domain SMD44_RS13330 PF08275 DNA primase catalytic core, N-terminal domain SMD44_RS13335 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS13335 PF14759 Reductase C-terminal SMD44_RS13340 PF13286 Phosphohydrolase-associated domain SMD44_RS13340 PF01966 HD domain SMD44_RS13355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMD44_RS13355 PF01568 Molydopterin dinucleotide binding domain SMD44_RS13355 PF00384 Molybdopterin oxidoreductase SMD44_RS13380 PF00672 HAMP domain SMD44_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS13380 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS13390 PF09278 MerR, DNA binding SMD44_RS13390 PF00376 MerR family regulatory protein SMD44_RS13410 PF01925 Sulfite exporter TauE/SafE SMD44_RS13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS13415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SMD44_RS13415 PF04324 BFD-like [2Fe-2S] binding domain SMD44_RS13415 PF18267 Rubredoxin NAD+ reductase C-terminal domain SMD44_RS13415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SMD44_RS13420 PF18267 Rubredoxin NAD+ reductase C-terminal domain SMD44_RS13420 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SMD44_RS13420 PF04324 BFD-like [2Fe-2S] binding domain SMD44_RS13420 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS13420 PF13806 Rieske-like [2Fe-2S] domain SMD44_RS13420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SMD44_RS13435 PF00106 short chain dehydrogenase SMD44_RS13445 PF13520 Amino acid permease SMD44_RS13455 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS13460 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS13465 PF00561 alpha/beta hydrolase fold SMD44_RS13475 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SMD44_RS13475 PF00391 PEP-utilising enzyme, mobile domain SMD44_RS13475 PF02896 PEP-utilising enzyme, TIM barrel domain SMD44_RS13480 PF00480 ROK family SMD44_RS13495 PF01207 Dihydrouridine synthase (Dus) SMD44_RS13505 PF07690 Major Facilitator Superfamily SMD44_RS13510 PF07690 Major Facilitator Superfamily SMD44_RS13515 PF00248 Aldo/keto reductase family SMD44_RS13525 PF05199 GMC oxidoreductase SMD44_RS13525 PF00732 GMC oxidoreductase SMD44_RS13535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS13535 PF03129 Anticodon binding domain SMD44_RS13540 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SMD44_RS13540 PF01297 Zinc-uptake complex component A periplasmic SMD44_RS13545 PF00005 ABC transporter SMD44_RS13550 PF00950 ABC 3 transport family SMD44_RS13555 PF01475 Ferric uptake regulator family SMD44_RS13560 PF01255 Putative undecaprenyl diphosphate synthase SMD44_RS13565 PF02565 Recombination protein O C terminal SMD44_RS13565 PF11967 Recombination protein O N terminal SMD44_RS13610 PF03704 Bacterial transcriptional activator domain SMD44_RS13610 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS13610 PF00931 NB-ARC domain SMD44_RS13615 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS13620 PF12680 SnoaL-like domain SMD44_RS13625 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS13630 PF08533 Beta-galactosidase C-terminal domain SMD44_RS13630 PF02449 Beta-galactosidase SMD44_RS13630 PF08532 Beta-galactosidase trimerisation domain SMD44_RS13635 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS13635 PF07729 FCD domain SMD44_RS13640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS13645 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS13650 PF00005 ABC transporter SMD44_RS13650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS13655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS13655 PF00005 ABC transporter SMD44_RS13660 PF00701 Dihydrodipicolinate synthetase family SMD44_RS13665 PF13088 BNR repeat-like domain SMD44_RS13665 PF04650 YSIRK type signal peptide SMD44_RS13665 PF02973 Sialidase, N-terminal domain SMD44_RS13670 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS13670 PF00072 Response regulator receiver domain SMD44_RS13675 PF07730 Histidine kinase SMD44_RS13680 PF03176 MMPL family SMD44_RS13690 PF08502 LeuA allosteric (dimerisation) domain SMD44_RS13690 PF00682 HMGL-like SMD44_RS13695 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS13695 PF16485 Protealysin propeptide SMD44_RS13695 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS13705 PF00232 Glycosyl hydrolase family 1 SMD44_RS13710 PF07650 KH domain SMD44_RS13710 PF01926 50S ribosome-binding GTPase SMD44_RS13725 PF07690 Major Facilitator Superfamily SMD44_RS13730 PF04237 YjbR SMD44_RS13735 PF03471 Transporter associated domain SMD44_RS13735 PF01595 Cyclin M transmembrane N-terminal domain SMD44_RS13735 PF00571 CBS domain SMD44_RS13740 PF02130 Uncharacterized protein family UPF0054 SMD44_RS13745 PF02562 PhoH-like protein SMD44_RS13750 PF00294 pfkB family carbohydrate kinase SMD44_RS13755 PF00962 Adenosine/AMP deaminase SMD44_RS13760 PF00753 Metallo-beta-lactamase superfamily SMD44_RS13760 PF12706 Beta-lactamase superfamily domain SMD44_RS13765 PF01230 HIT domain SMD44_RS13770 PF07676 WD40-like Beta Propeller Repeat SMD44_RS13770 PF03572 Peptidase family S41 SMD44_RS13770 PF14684 Tricorn protease C1 domain SMD44_RS13770 PF14685 Tricorn protease PDZ domain SMD44_RS13785 PF04452 RNA methyltransferase SMD44_RS13790 PF03060 Nitronate monooxygenase SMD44_RS13795 PF00226 DnaJ domain SMD44_RS13795 PF00684 DnaJ central domain SMD44_RS13795 PF01556 DnaJ C terminal domain SMD44_RS13800 PF01628 HrcA protein C terminal domain SMD44_RS13825 PF00672 HAMP domain SMD44_RS13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS13825 PF00072 Response regulator receiver domain SMD44_RS13825 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS13825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SMD44_RS13825 PF01627 Hpt domain SMD44_RS13830 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS13830 PF00072 Response regulator receiver domain SMD44_RS13835 PF00501 AMP-binding enzyme SMD44_RS13840 PF06421 GTP-binding protein LepA C-terminus SMD44_RS13840 PF00009 Elongation factor Tu GTP binding domain SMD44_RS13840 PF00679 Elongation factor G C-terminus SMD44_RS13840 PF03144 Elongation factor Tu domain 2 SMD44_RS13845 PF01649 Ribosomal protein S20 SMD44_RS13860 PF04264 YceI-like domain SMD44_RS13875 PF02645 Uncharacterised protein, DegV family COG1307 SMD44_RS13885 PF09334 tRNA synthetases class I (M) SMD44_RS13885 PF13603 Leucyl-tRNA synthetase, Domain 2 SMD44_RS13885 PF08264 Anticodon-binding domain of tRNA SMD44_RS13895 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SMD44_RS13895 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SMD44_RS13895 PF10531 SLBB domain SMD44_RS13905 PF09594 Glycosyltransferase family 87 SMD44_RS13915 PF07690 Major Facilitator Superfamily SMD44_RS13930 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS13945 PF01467 Cytidylyltransferase-like SMD44_RS13960 PF01435 Peptidase family M48 SMD44_RS13975 PF00171 Aldehyde dehydrogenase family SMD44_RS13985 PF01472 PUA domain SMD44_RS13985 PF00696 Amino acid kinase family SMD44_RS13995 PF01926 50S ribosome-binding GTPase SMD44_RS13995 PF09269 Domain of unknown function (DUF1967) SMD44_RS13995 PF01018 GTP1/OBG SMD44_RS14000 PF01016 Ribosomal L27 protein SMD44_RS14005 PF00829 Ribosomal prokaryotic L21 protein SMD44_RS14015 PF10150 Ribonuclease E/G family SMD44_RS14030 PF02342 TerD domain SMD44_RS14040 PF01928 CYTH domain SMD44_RS14040 PF05235 CHAD domain SMD44_RS14045 PF01098 Cell cycle protein SMD44_RS14050 PF05223 NTF2-like N-terminal transpeptidase domain SMD44_RS14050 PF03717 Penicillin-binding Protein dimerisation domain SMD44_RS14050 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS14070 PF00334 Nucleoside diphosphate kinase SMD44_RS14080 PF08245 Mur ligase middle domain SMD44_RS14080 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS14090 PF07730 Histidine kinase SMD44_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS14100 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS14105 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS14105 PF00072 Response regulator receiver domain SMD44_RS14110 PF02350 UDP-N-acetylglucosamine 2-epimerase SMD44_RS14120 PF10458 Valyl tRNA synthetase tRNA binding arm SMD44_RS14120 PF00133 tRNA synthetases class I (I, L, M and V) SMD44_RS14120 PF08264 Anticodon-binding domain of tRNA SMD44_RS14140 PF07724 AAA domain (Cdc48 subfamily) SMD44_RS14140 PF06689 ClpX C4-type zinc finger SMD44_RS14140 PF10431 C-terminal, D2-small domain, of ClpB protein SMD44_RS14145 PF00574 Clp protease SMD44_RS14150 PF00574 Clp protease SMD44_RS14155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMD44_RS14155 PF05698 Bacterial trigger factor protein (TF) C-terminus SMD44_RS14155 PF05697 Bacterial trigger factor protein (TF) SMD44_RS14170 PF13360 PQQ-like domain SMD44_RS14170 PF00069 Protein kinase domain SMD44_RS14180 PF01757 Acyltransferase family SMD44_RS14195 PF00005 ABC transporter SMD44_RS14195 PF02687 FtsX-like permease family SMD44_RS14195 PF12704 MacB-like periplasmic core domain SMD44_RS14205 PF17668 Acetyltransferase (GNAT) domain SMD44_RS14205 PF13530 Sterol carrier protein domain SMD44_RS14215 PF06827 Zinc finger found in FPG and IleRS SMD44_RS14215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMD44_RS14215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMD44_RS14220 PF02502 Ribose/Galactose Isomerase SMD44_RS14225 PF00324 Amino acid permease SMD44_RS14230 PF08031 Berberine and berberine like SMD44_RS14230 PF01565 FAD binding domain SMD44_RS14235 PF02632 BioY family SMD44_RS14240 PF00324 Amino acid permease SMD44_RS14245 PF00324 Amino acid permease SMD44_RS14250 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMD44_RS14250 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMD44_RS14255 PF01323 DSBA-like thioredoxin domain SMD44_RS14260 PF11838 ERAP1-like C-terminal domain SMD44_RS14260 PF01433 Peptidase family M1 domain SMD44_RS14265 PF02983 Alpha-lytic protease prodomain SMD44_RS14265 PF00089 Trypsin SMD44_RS14275 PF00144 Beta-lactamase SMD44_RS14295 PF00082 Subtilase family SMD44_RS14300 PF02225 PA domain SMD44_RS14300 PF04389 Peptidase family M28 SMD44_RS14310 PF04545 Sigma-70, region 4 SMD44_RS14310 PF04542 Sigma-70 region 2 SMD44_RS14315 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMD44_RS14315 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMD44_RS14325 PF07690 Major Facilitator Superfamily SMD44_RS14330 PF03466 LysR substrate binding domain SMD44_RS14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS14385 PF00005 ABC transporter SMD44_RS14390 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS14395 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS14405 PF11838 ERAP1-like C-terminal domain SMD44_RS14405 PF01433 Peptidase family M1 domain SMD44_RS14420 PF00892 EamA-like transporter family SMD44_RS14425 PF01047 MarR family SMD44_RS14435 PF02446 4-alpha-glucanotransferase SMD44_RS14450 PF00924 Mechanosensitive ion channel SMD44_RS14455 PF00480 ROK family SMD44_RS14460 PF13416 Bacterial extracellular solute-binding protein SMD44_RS14465 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS14470 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS14475 PF02056 Family 4 glycosyl hydrolase SMD44_RS14475 PF11975 Family 4 glycosyl hydrolase C-terminal domain SMD44_RS14490 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS14500 PF16918 Protein kinase G tetratricopeptide repeat SMD44_RS14500 PF16919 Protein kinase G rubredoxin domain SMD44_RS14500 PF00069 Protein kinase domain SMD44_RS14525 PF01152 Bacterial-like globin SMD44_RS14540 PF12848 ABC transporter SMD44_RS14540 PF00005 ABC transporter SMD44_RS14545 PF00583 Acetyltransferase (GNAT) family SMD44_RS14560 PF01580 FtsK/SpoIIIE family SMD44_RS14620 PF00436 Single-strand binding protein family SMD44_RS14670 PF00501 AMP-binding enzyme SMD44_RS14675 PF13649 Methyltransferase domain SMD44_RS14695 PF00005 ABC transporter SMD44_RS14700 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS14710 PF00171 Aldehyde dehydrogenase family SMD44_RS14715 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS14715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS14715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS14720 PF04962 KduI/IolB family SMD44_RS14730 PF00294 pfkB family carbohydrate kinase SMD44_RS14735 PF01261 Xylose isomerase-like TIM barrel SMD44_RS14755 PF00403 Heavy-metal-associated domain SMD44_RS14760 PF00285 Citrate synthase, C-terminal domain SMD44_RS14765 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SMD44_RS14765 PF13538 UvrD-like helicase C-terminal domain SMD44_RS14765 PF14490 Helix-hairpin-helix containing domain SMD44_RS14770 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS14775 PF00005 ABC transporter SMD44_RS14780 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS14785 PF00294 pfkB family carbohydrate kinase SMD44_RS14790 PF05025 RbsD / FucU transport protein family SMD44_RS14810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS14810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS14815 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS14840 PF01047 MarR family SMD44_RS14840 PF00583 Acetyltransferase (GNAT) family SMD44_RS14850 PF09278 MerR, DNA binding SMD44_RS14850 PF00376 MerR family regulatory protein SMD44_RS14855 PF00892 EamA-like transporter family SMD44_RS14860 PF03466 LysR substrate binding domain SMD44_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS14865 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMD44_RS14865 PF00933 Glycosyl hydrolase family 3 N terminal domain SMD44_RS14875 PF05576 PS-10 peptidase S37 SMD44_RS14885 PF00664 ABC transporter transmembrane region SMD44_RS14885 PF00005 ABC transporter SMD44_RS14895 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS14895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS14895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS14900 PF00491 Arginase family SMD44_RS14905 PF00474 Sodium:solute symporter family SMD44_RS14910 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS14915 PF15698 Phosphatase SMD44_RS14925 PF01965 DJ-1/PfpI family SMD44_RS14940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS14940 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS14940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS14945 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS14950 PF01039 Carboxyl transferase domain SMD44_RS14960 PF00682 HMGL-like SMD44_RS14965 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS14975 PF00282 Pyridoxal-dependent decarboxylase conserved domain SMD44_RS14980 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SMD44_RS14990 PF06276 Ferric iron reductase FhuF-like transporter SMD44_RS14990 PF04183 IucA / IucC family SMD44_RS14995 PF00728 Glycosyl hydrolase family 20, catalytic domain SMD44_RS14995 PF02838 Glycosyl hydrolase family 20, domain 2 SMD44_RS15010 PF01380 SIS domain SMD44_RS15015 PF00582 Universal stress protein family SMD44_RS15025 PF12833 Helix-turn-helix domain SMD44_RS15025 PF01965 DJ-1/PfpI family SMD44_RS15030 PF00929 Exonuclease SMD44_RS15045 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15060 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15065 PF00232 Glycosyl hydrolase family 1 SMD44_RS15080 PF00072 Response regulator receiver domain SMD44_RS15080 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS15105 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS15150 PF00563 EAL domain SMD44_RS15150 PF03707 Bacterial signalling protein N terminal repeat SMD44_RS15150 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS15155 PF03466 LysR substrate binding domain SMD44_RS15165 PF00296 Luciferase-like monooxygenase SMD44_RS15180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS15185 PF01425 Amidase SMD44_RS15200 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15205 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15210 PF00005 ABC transporter SMD44_RS15225 PF00975 Thioesterase domain SMD44_RS15230 PF01474 Class-II DAHP synthetase family SMD44_RS15235 PF00425 chorismate binding enzyme SMD44_RS15235 PF04715 Anthranilate synthase component I, N terminal region SMD44_RS15240 PF00117 Glutamine amidotransferase class-I SMD44_RS15245 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS15245 PF00155 Aminotransferase class I and II SMD44_RS15250 PF00591 Glycosyl transferase family, a/b domain SMD44_RS15250 PF02885 Glycosyl transferase family, helical bundle domain SMD44_RS15265 PF07730 Histidine kinase SMD44_RS15270 PF00072 Response regulator receiver domain SMD44_RS15270 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS15275 PF03176 MMPL family SMD44_RS15285 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS15285 PF00072 Response regulator receiver domain SMD44_RS15295 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS15295 PF00501 AMP-binding enzyme SMD44_RS15300 PF18416 N-acetylglucosamine binding protein domain 2 SMD44_RS15300 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading SMD44_RS15325 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS15325 PF07729 FCD domain SMD44_RS15340 PF01341 Glycosyl hydrolases family 6 SMD44_RS15340 PF00553 Cellulose binding domain SMD44_RS15370 PF13344 Haloacid dehalogenase-like hydrolase SMD44_RS15380 PF01547 Bacterial extracellular solute-binding protein SMD44_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15390 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15395 PF08402 TOBE domain SMD44_RS15395 PF00005 ABC transporter SMD44_RS15405 PF01266 FAD dependent oxidoreductase SMD44_RS15410 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS15410 PF07702 UTRA domain SMD44_RS15425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS15425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS15430 PF03928 Haem-degrading SMD44_RS15440 PF01557 Fumarylacetoacetate (FAA) hydrolase family SMD44_RS15445 PF02096 60Kd inner membrane protein SMD44_RS15445 PF14849 YidC periplasmic domain SMD44_RS15455 PF01638 HxlR-like helix-turn-helix SMD44_RS15465 PF00474 Sodium:solute symporter family SMD44_RS15470 PF11755 Protein of unknown function (DUF3311) SMD44_RS15475 PF04203 Sortase domain SMD44_RS15485 PF09126 Restriction endonuclease NaeI SMD44_RS15490 PF03852 DNA mismatch endonuclease Vsr SMD44_RS15495 PF00145 C-5 cytosine-specific DNA methylase SMD44_RS15535 PF12833 Helix-turn-helix domain SMD44_RS15535 PF01965 DJ-1/PfpI family SMD44_RS15540 PF07690 Major Facilitator Superfamily SMD44_RS15545 PF04286 Protein of unknown function (DUF445) SMD44_RS15555 PF08044 Domain of unknown function (DUF1707) SMD44_RS15560 PF00005 ABC transporter SMD44_RS15575 PF00912 Transglycosylase SMD44_RS15575 PF17092 Penicillin-binding protein OB-like domain SMD44_RS15575 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS15580 PF00893 Small Multidrug Resistance protein SMD44_RS15585 PF00166 Chaperonin 10 Kd subunit SMD44_RS15595 PF00578 AhpC/TSA family SMD44_RS15600 PF00083 Sugar (and other) transporter SMD44_RS15600 PF08946 Osmosensory transporter coiled coil SMD44_RS15610 PF01725 Ham1 family SMD44_RS15620 PF01138 3' exoribonuclease family, domain 1 SMD44_RS15620 PF03725 3' exoribonuclease family, domain 2 SMD44_RS15625 PF00367 phosphotransferase system, EIIB SMD44_RS15630 PF02378 Phosphotransferase system, EIIC SMD44_RS15635 PF02378 Phosphotransferase system, EIIC SMD44_RS15640 PF12706 Beta-lactamase superfamily domain SMD44_RS15650 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS15655 PF02597 ThiS family SMD44_RS15660 PF00005 ABC transporter SMD44_RS15665 PF01032 FecCD transport family SMD44_RS15680 PF00324 Amino acid permease SMD44_RS15685 PF01235 Sodium:alanine symporter family SMD44_RS15695 PF02617 ATP-dependent Clp protease adaptor protein ClpS SMD44_RS15700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SMD44_RS15700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SMD44_RS15705 PF00857 Isochorismatase family SMD44_RS15715 PF05547 Immune inhibitor A peptidase M6 SMD44_RS15715 PF00801 PKD domain SMD44_RS15735 PF04686 Streptomyces sporulation and cell division protein, SsgA SMD44_RS15740 PF02913 FAD linked oxidases, C-terminal domain SMD44_RS15740 PF01565 FAD binding domain SMD44_RS15750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMD44_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15765 PF00571 CBS domain SMD44_RS15765 PF00005 ABC transporter SMD44_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS15800 PF04851 Type III restriction enzyme, res subunit SMD44_RS15810 PF06259 Alpha/beta hydrolase SMD44_RS15830 PF06236 Tyrosinase co-factor MelC1 SMD44_RS15835 PF00264 Common central domain of tyrosinase SMD44_RS15855 PF00857 Isochorismatase family SMD44_RS15870 PF08281 Sigma-70, region 4 SMD44_RS15870 PF04542 Sigma-70 region 2 SMD44_RS15885 PF01799 [2Fe-2S] binding domain SMD44_RS15885 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS15885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SMD44_RS15885 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SMD44_RS15890 PF01799 [2Fe-2S] binding domain SMD44_RS15890 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS15895 PF00941 FAD binding domain in molybdopterin dehydrogenase SMD44_RS15895 PF03450 CO dehydrogenase flavoprotein C-terminal domain SMD44_RS15900 PF07691 PA14 domain SMD44_RS15900 PF00728 Glycosyl hydrolase family 20, catalytic domain SMD44_RS15900 PF02838 Glycosyl hydrolase family 20, domain 2 SMD44_RS15910 PF07690 Major Facilitator Superfamily SMD44_RS15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS15915 PF03466 LysR substrate binding domain SMD44_RS15920 PF02622 Uncharacterized ACR, COG1678 SMD44_RS15925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMD44_RS15930 PF00216 Bacterial DNA-binding protein SMD44_RS15935 PF00390 Malic enzyme, N-terminal domain SMD44_RS15935 PF03949 Malic enzyme, NAD binding domain SMD44_RS15940 PF13538 UvrD-like helicase C-terminal domain SMD44_RS15950 PF04542 Sigma-70 region 2 SMD44_RS15950 PF04545 Sigma-70, region 4 SMD44_RS15970 PF07690 Major Facilitator Superfamily SMD44_RS16010 PF01522 Polysaccharide deacetylase SMD44_RS16020 PF03466 LysR substrate binding domain SMD44_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS16030 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SMD44_RS16040 PF01668 SmpB protein SMD44_RS16045 PF13180 PDZ domain SMD44_RS16045 PF03572 Peptidase family S41 SMD44_RS16050 PF02687 FtsX-like permease family SMD44_RS16050 PF18075 FtsX extracellular domain SMD44_RS16055 PF00005 ABC transporter SMD44_RS16070 PF00472 RF-1 domain SMD44_RS16070 PF03462 PCRF domain SMD44_RS16075 PF00069 Protein kinase domain SMD44_RS16080 PF00069 Protein kinase domain SMD44_RS16085 PF01580 FtsK/SpoIIIE family SMD44_RS16095 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS16100 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS16115 PF11380 Stealth protein CR2, conserved region 2 SMD44_RS16115 PF17101 Stealth protein CR1, conserved region 1 SMD44_RS16115 PF00534 Glycosyl transferases group 1 SMD44_RS16115 PF17103 Stealth protein CR4, conserved region 4 SMD44_RS16115 PF17102 Stealth protein CR3, conserved region 3 SMD44_RS16120 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SMD44_RS16125 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SMD44_RS16135 PF00535 Glycosyl transferase family 2 SMD44_RS16140 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS16145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS16145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS16150 PF00005 ABC transporter SMD44_RS16160 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS16160 PF00072 Response regulator receiver domain SMD44_RS16180 PF00005 ABC transporter SMD44_RS16185 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SMD44_RS16190 PF00535 Glycosyl transferase family 2 SMD44_RS16215 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS16215 PF01225 Mur ligase family, catalytic domain SMD44_RS16215 PF08245 Mur ligase middle domain SMD44_RS16230 PF00535 Glycosyl transferase family 2 SMD44_RS16235 PF05088 Bacterial NAD-glutamate dehydrogenase SMD44_RS16260 PF07516 SecA Wing and Scaffold domain SMD44_RS16260 PF07517 SecA DEAD-like domain SMD44_RS16260 PF01043 SecA preprotein cross-linking domain SMD44_RS16270 PF06224 Winged helix DNA-binding domain SMD44_RS16275 PF00072 Response regulator receiver domain SMD44_RS16275 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS16280 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SMD44_RS16280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SMD44_RS16290 PF10647 Lipoprotein LpqB beta-propeller domain SMD44_RS16290 PF10646 Sporulation and spore germination SMD44_RS16295 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS16295 PF00672 HAMP domain SMD44_RS16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS16300 PF00072 Response regulator receiver domain SMD44_RS16300 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS16305 PF01008 Initiation factor 2 subunit family SMD44_RS16320 PF14258 Domain of unknown function (DUF4350) SMD44_RS16325 PF17863 AAA lid domain SMD44_RS16325 PF07726 ATPase family associated with various cellular activities (AAA) SMD44_RS16370 PF05221 S-adenosyl-L-homocysteine hydrolase SMD44_RS16370 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SMD44_RS16375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMD44_RS16375 PF02378 Phosphotransferase system, EIIC SMD44_RS16375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMD44_RS16385 PF01238 Phosphomannose isomerase type I SMD44_RS16395 PF03966 Trm112p-like protein SMD44_RS16400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMD44_RS16400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMD44_RS16400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMD44_RS16400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMD44_RS16405 PF02652 L-lactate permease SMD44_RS16425 PF00534 Glycosyl transferases group 1 SMD44_RS16425 PF00535 Glycosyl transferase family 2 SMD44_RS16430 PF02467 Transcription factor WhiB SMD44_RS16440 PF01933 Uncharacterised protein family UPF0052 SMD44_RS16445 PF00881 Nitroreductase family SMD44_RS16445 PF01996 F420-0:Gamma-glutamyl ligase SMD44_RS16455 PF00483 Nucleotidyl transferase SMD44_RS16470 PF03816 Cell envelope-related transcriptional attenuator domain SMD44_RS16475 PF03816 Cell envelope-related transcriptional attenuator domain SMD44_RS16490 PF03816 Cell envelope-related transcriptional attenuator domain SMD44_RS16500 PF03061 Thioesterase superfamily SMD44_RS16505 PF03816 Cell envelope-related transcriptional attenuator domain SMD44_RS16525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SMD44_RS16525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SMD44_RS16525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SMD44_RS16530 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS16530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS16530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS16545 PF00731 AIR carboxylase SMD44_RS16550 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SMD44_RS16550 PF02222 ATP-grasp domain SMD44_RS16565 PF00072 Response regulator receiver domain SMD44_RS16565 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS16570 PF00854 POT family SMD44_RS16605 PF01740 STAS domain SMD44_RS16610 PF04545 Sigma-70, region 4 SMD44_RS16610 PF04539 Sigma-70 region 3 SMD44_RS16610 PF04542 Sigma-70 region 2 SMD44_RS16615 PF01979 Amidohydrolase family SMD44_RS16625 PF01546 Peptidase family M20/M25/M40 SMD44_RS16625 PF07687 Peptidase dimerisation domain SMD44_RS16630 PF01175 Urocanase Rossmann-like domain SMD44_RS16630 PF17392 Urocanase C-terminal domain SMD44_RS16630 PF17391 Urocanase N-terminal domain SMD44_RS16635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMD44_RS16635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMD44_RS16640 PF03466 LysR substrate binding domain SMD44_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS16690 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SMD44_RS16695 PF00484 Carbonic anhydrase SMD44_RS16705 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS16705 PF00571 CBS domain SMD44_RS16710 PF13472 GDSL-like Lipase/Acylhydrolase family SMD44_RS16715 PF02803 Thiolase, C-terminal domain SMD44_RS16715 PF00108 Thiolase, N-terminal domain SMD44_RS16740 PF01494 FAD binding domain SMD44_RS16745 PF18029 Glyoxalase-like domain SMD44_RS16745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMD44_RS16755 PF00005 ABC transporter SMD44_RS16760 PF02687 FtsX-like permease family SMD44_RS16760 PF12704 MacB-like periplasmic core domain SMD44_RS16775 PF02541 Ppx/GppA phosphatase family SMD44_RS16790 PF00113 Enolase, C-terminal TIM barrel domain SMD44_RS16790 PF03952 Enolase, N-terminal domain SMD44_RS16795 PF06737 Transglycosylase-like domain SMD44_RS16800 PF06737 Transglycosylase-like domain SMD44_RS16805 PF00067 Cytochrome P450 SMD44_RS16810 PF03819 MazG nucleotide pyrophosphohydrolase domain SMD44_RS16820 PF00069 Protein kinase domain SMD44_RS16820 PF03793 PASTA domain SMD44_RS16870 PF02559 CarD-like/TRCF domain SMD44_RS16870 PF17757 UvrB interaction domain SMD44_RS16870 PF03461 TRCF domain SMD44_RS16870 PF00271 Helicase conserved C-terminal domain SMD44_RS16870 PF00270 DEAD/DEAH box helicase SMD44_RS16875 PF12704 MacB-like periplasmic core domain SMD44_RS16875 PF02687 FtsX-like permease family SMD44_RS16880 PF00005 ABC transporter SMD44_RS16895 PF00474 Sodium:solute symporter family SMD44_RS16925 PF07730 Histidine kinase SMD44_RS16945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMD44_RS16945 PF14572 Phosphoribosyl synthetase-associated domain SMD44_RS16950 PF01386 Ribosomal L25p family SMD44_RS16950 PF14693 Ribosomal protein TL5, C-terminal domain SMD44_RS16955 PF01195 Peptidyl-tRNA hydrolase SMD44_RS16975 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS16985 PF13649 Methyltransferase domain SMD44_RS16990 PF01047 MarR family SMD44_RS16995 PF00072 Response regulator receiver domain SMD44_RS16995 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS17010 PF00474 Sodium:solute symporter family SMD44_RS17015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SMD44_RS17015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SMD44_RS17020 PF16363 GDP-mannose 4,6 dehydratase SMD44_RS17025 PF08544 GHMP kinases C terminal SMD44_RS17025 PF10509 Galactokinase galactose-binding signature SMD44_RS17025 PF00288 GHMP kinases N terminal domain SMD44_RS17035 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS17035 PF00072 Response regulator receiver domain SMD44_RS17050 PF00005 ABC transporter SMD44_RS17050 PF12848 ABC transporter SMD44_RS17050 PF16326 ABC transporter C-terminal domain SMD44_RS17060 PF08544 GHMP kinases C terminal SMD44_RS17060 PF00288 GHMP kinases N terminal domain SMD44_RS17080 PF01026 TatD related DNase SMD44_RS17090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMD44_RS17095 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase SMD44_RS17095 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase SMD44_RS17110 PF04073 Aminoacyl-tRNA editing domain SMD44_RS17110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS17110 PF03129 Anticodon binding domain SMD44_RS17125 PF13649 Methyltransferase domain SMD44_RS17175 PF00005 ABC transporter SMD44_RS17185 PF13190 PDGLE domain SMD44_RS17185 PF01891 Cobalt uptake substrate-specific transmembrane region SMD44_RS17195 PF03176 MMPL family SMD44_RS17200 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS17200 PF16859 Tetracyclin repressor-like, C-terminal domain SMD44_RS17220 PF00561 alpha/beta hydrolase fold SMD44_RS17225 PF00743 Flavin-binding monooxygenase-like SMD44_RS17240 PF03372 Endonuclease/Exonuclease/phosphatase family SMD44_RS17245 PF00583 Acetyltransferase (GNAT) family SMD44_RS17250 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS17250 PF00672 HAMP domain SMD44_RS17250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS17260 PF02525 Flavodoxin-like fold SMD44_RS17285 PF13302 Acetyltransferase (GNAT) domain SMD44_RS17290 PF00994 Probable molybdopterin binding domain SMD44_RS17295 PF01967 MoaC family SMD44_RS17300 PF00994 Probable molybdopterin binding domain SMD44_RS17300 PF03454 MoeA C-terminal region (domain IV) SMD44_RS17300 PF03453 MoeA N-terminal region (domain I and II) SMD44_RS17305 PF00483 Nucleotidyl transferase SMD44_RS17310 PF01812 5-formyltetrahydrofolate cyclo-ligase family SMD44_RS17315 PF01804 Penicillin amidase SMD44_RS17320 PF03471 Transporter associated domain SMD44_RS17320 PF00999 Sodium/hydrogen exchanger family SMD44_RS17320 PF02080 TrkA-C domain SMD44_RS17335 PF01048 Phosphorylase superfamily SMD44_RS17345 PF01741 Large-conductance mechanosensitive channel, MscL SMD44_RS17355 PF04055 Radical SAM superfamily SMD44_RS17370 PF03576 Peptidase family S58 SMD44_RS17375 PF17964 Bacterial Ig domain SMD44_RS17375 PF03734 L,D-transpeptidase catalytic domain SMD44_RS17395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMD44_RS17395 PF02378 Phosphotransferase system, EIIC SMD44_RS17405 PF08220 DeoR-like helix-turn-helix domain SMD44_RS17405 PF00455 DeoR C terminal sensor domain SMD44_RS17410 PF07690 Major Facilitator Superfamily SMD44_RS17420 PF00140 Sigma-70 factor, region 1.2 SMD44_RS17420 PF04542 Sigma-70 region 2 SMD44_RS17420 PF04539 Sigma-70 region 3 SMD44_RS17420 PF04545 Sigma-70, region 4 SMD44_RS17430 PF01047 MarR family SMD44_RS17435 PF07690 Major Facilitator Superfamily SMD44_RS17450 PF07497 Rho termination factor, RNA-binding domain SMD44_RS17450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMD44_RS17460 PF00171 Aldehyde dehydrogenase family SMD44_RS17465 PF07063 Domain of unknown function (DUF1338) SMD44_RS17470 PF01266 FAD dependent oxidoreductase SMD44_RS17470 PF16350 FAD dependent oxidoreductase central domain SMD44_RS17470 PF01571 Aminomethyltransferase folate-binding domain SMD44_RS17470 PF08669 Glycine cleavage T-protein C-terminal barrel domain SMD44_RS17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS17500 PF05384 Sensor protein DegS SMD44_RS17500 PF07730 Histidine kinase SMD44_RS17505 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS17505 PF00072 Response regulator receiver domain SMD44_RS17510 PF00144 Beta-lactamase SMD44_RS17515 PF00144 Beta-lactamase SMD44_RS17520 PF00893 Small Multidrug Resistance protein SMD44_RS17525 PF00893 Small Multidrug Resistance protein SMD44_RS17530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMD44_RS17540 PF00376 MerR family regulatory protein SMD44_RS17540 PF09278 MerR, DNA binding SMD44_RS17580 PF12464 Maltose acetyltransferase SMD44_RS17580 PF14602 Hexapeptide repeat of succinyl-transferase SMD44_RS17590 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS17590 PF00912 Transglycosylase SMD44_RS17600 PF00069 Protein kinase domain SMD44_RS17600 PF00211 Adenylate and Guanylate cyclase catalytic domain SMD44_RS17610 PF01547 Bacterial extracellular solute-binding protein SMD44_RS17620 PF00768 D-alanyl-D-alanine carboxypeptidase SMD44_RS17620 PF07943 Penicillin-binding protein 5, C-terminal domain SMD44_RS17645 PF00106 short chain dehydrogenase SMD44_RS17665 PF01965 DJ-1/PfpI family SMD44_RS17670 PF01965 DJ-1/PfpI family SMD44_RS17735 PF01522 Polysaccharide deacetylase SMD44_RS17740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMD44_RS17800 PF04055 Radical SAM superfamily SMD44_RS17810 PF07690 Major Facilitator Superfamily SMD44_RS17815 PF01022 Bacterial regulatory protein, arsR family SMD44_RS17830 PF01872 RibD C-terminal domain SMD44_RS17855 PF00171 Aldehyde dehydrogenase family SMD44_RS17860 PF07969 Amidohydrolase family SMD44_RS17875 PF00296 Luciferase-like monooxygenase SMD44_RS17885 PF03704 Bacterial transcriptional activator domain SMD44_RS17885 PF00931 NB-ARC domain SMD44_RS17885 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS17910 PF00501 AMP-binding enzyme SMD44_RS17910 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS17925 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS17930 PF00069 Protein kinase domain SMD44_RS17930 PF13360 PQQ-like domain SMD44_RS17940 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS17960 PF00144 Beta-lactamase SMD44_RS17970 PF01243 Pyridoxamine 5'-phosphate oxidase SMD44_RS17970 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SMD44_RS17995 PF13380 CoA binding domain SMD44_RS17995 PF13607 Succinyl-CoA ligase like flavodoxin domain SMD44_RS18000 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS18035 PF01613 Flavin reductase like domain SMD44_RS18040 PF07690 Major Facilitator Superfamily SMD44_RS18045 PF01965 DJ-1/PfpI family SMD44_RS18045 PF12833 Helix-turn-helix domain SMD44_RS18065 PF00107 Zinc-binding dehydrogenase SMD44_RS18065 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS18070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS18070 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS18070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS18090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS18090 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS18090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS18095 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS18095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS18095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS18100 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS18100 PF00501 AMP-binding enzyme SMD44_RS18110 PF01740 STAS domain SMD44_RS18130 PF00551 Formyl transferase SMD44_RS18165 PF00005 ABC transporter SMD44_RS18200 PF02687 FtsX-like permease family SMD44_RS18200 PF12704 MacB-like periplasmic core domain SMD44_RS18205 PF00005 ABC transporter SMD44_RS18220 PF00072 Response regulator receiver domain SMD44_RS18220 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS18225 PF00672 HAMP domain SMD44_RS18225 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS18230 PF13580 SIS domain SMD44_RS18235 PF18357 Diphteria toxin repressor SH3 domain SMD44_RS18235 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMD44_RS18235 PF02742 Iron dependent repressor, metal binding and dimerisation domain SMD44_RS18240 PF12697 Alpha/beta hydrolase family SMD44_RS18245 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region SMD44_RS18245 PF01243 Pyridoxamine 5'-phosphate oxidase SMD44_RS18250 PF00285 Citrate synthase, C-terminal domain SMD44_RS18260 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS18265 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS18265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS18265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS18270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMD44_RS18270 PF00364 Biotin-requiring enzyme SMD44_RS18270 PF02785 Biotin carboxylase C-terminal domain SMD44_RS18270 PF00289 Biotin carboxylase, N-terminal domain SMD44_RS18275 PF01039 Carboxyl transferase domain SMD44_RS18285 PF08608 Wyosine base formation SMD44_RS18285 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain SMD44_RS18320 PF00892 EamA-like transporter family SMD44_RS18330 PF00266 Aminotransferase class-V SMD44_RS18340 PF13732 Domain of unknown function (DUF4162) SMD44_RS18340 PF00005 ABC transporter SMD44_RS18350 PF08338 Domain of unknown function (DUF1731) SMD44_RS18350 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS18370 PF00005 ABC transporter SMD44_RS18375 PF02687 FtsX-like permease family SMD44_RS18375 PF00005 ABC transporter SMD44_RS18375 PF12704 MacB-like periplasmic core domain SMD44_RS18400 PF00144 Beta-lactamase SMD44_RS18420 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS18420 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS18505 PF00248 Aldo/keto reductase family SMD44_RS18525 PF01047 MarR family SMD44_RS18535 PF00860 Permease family SMD44_RS18565 PF11228 Protein of unknown function (DUF3027) SMD44_RS18575 PF07690 Major Facilitator Superfamily SMD44_RS18585 PF01048 Phosphorylase superfamily SMD44_RS18590 PF02621 Menaquinone biosynthesis SMD44_RS18595 PF00313 'Cold-shock' DNA-binding domain SMD44_RS18615 PF01032 FecCD transport family SMD44_RS18620 PF00005 ABC transporter SMD44_RS18625 PF01497 Periplasmic binding protein SMD44_RS18660 PF00271 Helicase conserved C-terminal domain SMD44_RS18660 PF04851 Type III restriction enzyme, res subunit SMD44_RS18670 PF13538 UvrD-like helicase C-terminal domain SMD44_RS18675 PF03932 CutC family SMD44_RS18680 PF00403 Heavy-metal-associated domain SMD44_RS18705 PF07690 Major Facilitator Superfamily SMD44_RS18715 PF00672 HAMP domain SMD44_RS18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS18715 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS18720 PF00072 Response regulator receiver domain SMD44_RS18720 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS18745 PF12704 MacB-like periplasmic core domain SMD44_RS18745 PF00005 ABC transporter SMD44_RS18745 PF02687 FtsX-like permease family SMD44_RS18760 PF01380 SIS domain SMD44_RS18760 PF01418 Helix-turn-helix domain, rpiR family SMD44_RS18765 PF01380 SIS domain SMD44_RS18785 PF08281 Sigma-70, region 4 SMD44_RS18785 PF04542 Sigma-70 region 2 SMD44_RS18790 PF00118 TCP-1/cpn60 chaperonin family SMD44_RS18795 PF00313 'Cold-shock' DNA-binding domain SMD44_RS18800 PF02597 ThiS family SMD44_RS18805 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS18810 PF00535 Glycosyl transferase family 2 SMD44_RS18815 PF00982 Glycosyltransferase family 20 SMD44_RS18815 PF05116 Sucrose-6F-phosphate phosphohydrolase SMD44_RS18840 PF00480 ROK family SMD44_RS18855 PF03707 Bacterial signalling protein N terminal repeat SMD44_RS18855 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS18855 PF00563 EAL domain SMD44_RS18860 PF01613 Flavin reductase like domain SMD44_RS18865 PF00472 RF-1 domain SMD44_RS18865 PF03462 PCRF domain SMD44_RS18870 PF02342 TerD domain SMD44_RS18890 PF11838 ERAP1-like C-terminal domain SMD44_RS18890 PF01433 Peptidase family M1 domain SMD44_RS18905 PF00072 Response regulator receiver domain SMD44_RS18905 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS18920 PF00107 Zinc-binding dehydrogenase SMD44_RS18920 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS18925 PF17668 Acetyltransferase (GNAT) domain SMD44_RS18925 PF13530 Sterol carrier protein domain SMD44_RS18940 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SMD44_RS18950 PF01266 FAD dependent oxidoreductase SMD44_RS18965 PF17912 MalK OB fold domain SMD44_RS18965 PF00005 ABC transporter SMD44_RS18975 PF00483 Nucleotidyl transferase SMD44_RS18985 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMD44_RS18985 PF00588 SpoU rRNA Methylase family SMD44_RS18990 PF01406 tRNA synthetases class I (C) catalytic domain SMD44_RS18990 PF09190 DALR domain SMD44_RS18995 PF01243 Pyridoxamine 5'-phosphate oxidase SMD44_RS19000 PF02542 YgbB family SMD44_RS19005 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SMD44_RS19010 PF02559 CarD-like/TRCF domain SMD44_RS19025 PF00072 Response regulator receiver domain SMD44_RS19025 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS19030 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS19035 PF01895 PhoU domain SMD44_RS19045 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS19050 PF07690 Major Facilitator Superfamily SMD44_RS19065 PF12708 Pectate lyase superfamily protein SMD44_RS19065 PF13229 Right handed beta helix region SMD44_RS19065 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SMD44_RS19070 PF10722 Putative bacterial sensory transduction regulator SMD44_RS19075 PF00534 Glycosyl transferases group 1 SMD44_RS19075 PF13439 Glycosyltransferase Family 4 SMD44_RS19085 PF00877 NlpC/P60 family SMD44_RS19095 PF10724 Protein of unknown function (DUF2516) SMD44_RS19105 PF01381 Helix-turn-helix SMD44_RS19145 PF00005 ABC transporter SMD44_RS19145 PF13732 Domain of unknown function (DUF4162) SMD44_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS19155 PF03466 LysR substrate binding domain SMD44_RS19160 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS19180 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS19180 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS19185 PF13732 Domain of unknown function (DUF4162) SMD44_RS19185 PF00005 ABC transporter SMD44_RS19190 PF01061 ABC-2 type transporter SMD44_RS19205 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS19210 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS19210 PF07702 UTRA domain SMD44_RS19220 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS19220 PF07729 FCD domain SMD44_RS19240 PF02580 D-Tyr-tRNA(Tyr) deacylase SMD44_RS19245 PF01571 Aminomethyltransferase folate-binding domain SMD44_RS19250 PF01475 Ferric uptake regulator family SMD44_RS19255 PF08768 Domain of unknown function (DUF1794) SMD44_RS19270 PF07210 Protein of unknown function (DUF1416) SMD44_RS19275 PF00581 Rhodanese-like domain SMD44_RS19300 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS19305 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS19310 PF13180 PDZ domain SMD44_RS19315 PF00072 Response regulator receiver domain SMD44_RS19315 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS19320 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS19320 PF00672 HAMP domain SMD44_RS19320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS19325 PF00005 ABC transporter SMD44_RS19335 PF02872 5'-nucleotidase, C-terminal domain SMD44_RS19335 PF17936 Bacterial Ig domain SMD44_RS19335 PF00149 Calcineurin-like phosphoesterase SMD44_RS19340 PF00583 Acetyltransferase (GNAT) family SMD44_RS19345 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS19350 PF00005 ABC transporter SMD44_RS19360 PF02503 Polyphosphate kinase middle domain SMD44_RS19360 PF13089 Polyphosphate kinase N-terminal domain SMD44_RS19360 PF13090 Polyphosphate kinase C-terminal domain 2 SMD44_RS19360 PF17941 Polyphosphate kinase C-terminal domain 1 SMD44_RS19370 PF00293 NUDIX domain SMD44_RS19370 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS19375 PF12849 PBP superfamily domain SMD44_RS19380 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS19385 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS19390 PF00005 ABC transporter SMD44_RS19400 PF01384 Phosphate transporter family SMD44_RS19410 PF02583 Metal-sensitive transcriptional repressor SMD44_RS19425 PF01565 FAD binding domain SMD44_RS19425 PF08031 Berberine and berberine like SMD44_RS19430 PF01569 PAP2 superfamily SMD44_RS19435 PF01551 Peptidase family M23 SMD44_RS19435 PF10145 Phage-related minor tail protein SMD44_RS19435 PF01464 Transglycosylase SLT domain SMD44_RS19505 PF00005 ABC transporter SMD44_RS19515 PF07730 Histidine kinase SMD44_RS19520 PF00072 Response regulator receiver domain SMD44_RS19520 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS19545 PF01047 MarR family SMD44_RS19555 PF08448 PAS fold SMD44_RS19555 PF07228 Stage II sporulation protein E (SpoIIE) SMD44_RS19555 PF13581 Histidine kinase-like ATPase domain SMD44_RS19555 PF13466 STAS domain SMD44_RS19560 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS19570 PF08305 NPCBM/NEW2 domain SMD44_RS19570 PF12905 Endo-alpha-N-acetylgalactosaminidase SMD44_RS19570 PF18080 Galactose mutarotase-like fold domain SMD44_RS19570 PF17451 Glycosyl hydrolase 101 beta sandwich domain SMD44_RS19570 PF17974 Galactose-binding domain-like SMD44_RS19570 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase SMD44_RS19575 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS19590 PF01266 FAD dependent oxidoreductase SMD44_RS19595 PF02390 Putative methyltransferase SMD44_RS19605 PF00248 Aldo/keto reductase family SMD44_RS19620 PF07690 Major Facilitator Superfamily SMD44_RS19645 PF00005 ABC transporter SMD44_RS19645 PF13732 Domain of unknown function (DUF4162) SMD44_RS19655 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS19690 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMD44_RS19700 PF01022 Bacterial regulatory protein, arsR family SMD44_RS19705 PF01758 Sodium Bile acid symporter family SMD44_RS19715 PF01022 Bacterial regulatory protein, arsR family SMD44_RS19730 PF00270 DEAD/DEAH box helicase SMD44_RS19730 PF00271 Helicase conserved C-terminal domain SMD44_RS19755 PF00891 O-methyltransferase domain SMD44_RS19760 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS19760 PF03704 Bacterial transcriptional activator domain SMD44_RS19760 PF00931 NB-ARC domain SMD44_RS19765 PF01047 MarR family SMD44_RS19770 PF01494 FAD binding domain SMD44_RS19800 PF07690 Major Facilitator Superfamily SMD44_RS19805 PF00248 Aldo/keto reductase family SMD44_RS19815 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS19815 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS19820 PF00550 Phosphopantetheine attachment site SMD44_RS19835 PF00072 Response regulator receiver domain SMD44_RS19835 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS19860 PF08450 SMP-30/Gluconolactonase/LRE-like region SMD44_RS19870 PF01494 FAD binding domain SMD44_RS19875 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS19875 PF03704 Bacterial transcriptional activator domain SMD44_RS19890 PF02683 Cytochrome C biogenesis protein transmembrane region SMD44_RS19895 PF06965 Na+/H+ antiporter 1 SMD44_RS19895 PF13462 Thioredoxin SMD44_RS19905 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold SMD44_RS19905 PF00270 DEAD/DEAH box helicase SMD44_RS19905 PF11898 Domain of unknown function (DUF3418) SMD44_RS19905 PF04408 Helicase associated domain (HA2) SMD44_RS19905 PF00271 Helicase conserved C-terminal domain SMD44_RS19930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMD44_RS19930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMD44_RS19940 PF02769 AIR synthase related protein, C-terminal domain SMD44_RS19940 PF00586 AIR synthase related protein, N-terminal domain SMD44_RS19945 PF00156 Phosphoribosyl transferase domain SMD44_RS19960 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS19975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SMD44_RS19975 PF00586 AIR synthase related protein, N-terminal domain SMD44_RS19975 PF02769 AIR synthase related protein, C-terminal domain SMD44_RS19985 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SMD44_RS19990 PF11774 Lsr2 SMD44_RS20005 PF00005 ABC transporter SMD44_RS20005 PF13732 Domain of unknown function (DUF4162) SMD44_RS20020 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS20030 PF01259 SAICAR synthetase SMD44_RS20045 PF02844 Phosphoribosylglycinamide synthetase, N domain SMD44_RS20045 PF02843 Phosphoribosylglycinamide synthetase, C domain SMD44_RS20045 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMD44_RS20065 PF14659 Phage integrase, N-terminal SAM-like domain SMD44_RS20065 PF00589 Phage integrase family SMD44_RS20070 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS20075 PF00293 NUDIX domain SMD44_RS20130 PF09957 Bacterial antitoxin of type II TA system, VapB SMD44_RS20135 PF01850 PIN domain SMD44_RS20140 PF07690 Major Facilitator Superfamily SMD44_RS20145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS20145 PF03466 LysR substrate binding domain SMD44_RS20160 PF03466 LysR substrate binding domain SMD44_RS20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS20170 PF16326 ABC transporter C-terminal domain SMD44_RS20170 PF00005 ABC transporter SMD44_RS20170 PF12848 ABC transporter SMD44_RS20180 PF05872 Bacterial protein of unknown function (DUF853) SMD44_RS20210 PF14437 MafB19-like deaminase SMD44_RS20250 PF07876 Stress responsive A/B Barrel Domain SMD44_RS20255 PF04539 Sigma-70 region 3 SMD44_RS20255 PF04545 Sigma-70, region 4 SMD44_RS20255 PF04542 Sigma-70 region 2 SMD44_RS20260 PF04539 Sigma-70 region 3 SMD44_RS20260 PF04545 Sigma-70, region 4 SMD44_RS20260 PF04542 Sigma-70 region 2 SMD44_RS20275 PF01047 MarR family SMD44_RS20280 PF07690 Major Facilitator Superfamily SMD44_RS20290 PF01243 Pyridoxamine 5'-phosphate oxidase SMD44_RS20300 PF07690 Major Facilitator Superfamily SMD44_RS20315 PF00672 HAMP domain SMD44_RS20315 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS20320 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS20320 PF00072 Response regulator receiver domain SMD44_RS20330 PF03992 Antibiotic biosynthesis monooxygenase SMD44_RS20355 PF00132 Bacterial transferase hexapeptide (six repeats) SMD44_RS20360 PF04542 Sigma-70 region 2 SMD44_RS20360 PF08281 Sigma-70, region 4 SMD44_RS20360 PF12680 SnoaL-like domain SMD44_RS20365 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS20395 PF00072 Response regulator receiver domain SMD44_RS20415 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS20415 PF17926 Tetracyclin repressor-like, C-terminal domain SMD44_RS20420 PF07690 Major Facilitator Superfamily SMD44_RS20430 PF04542 Sigma-70 region 2 SMD44_RS20430 PF08281 Sigma-70, region 4 SMD44_RS20450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS20450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS20460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS20460 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS20460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS20595 PF13180 PDZ domain SMD44_RS20600 PF03009 Glycerophosphoryl diester phosphodiesterase family SMD44_RS20610 PF01043 SecA preprotein cross-linking domain SMD44_RS20610 PF07516 SecA Wing and Scaffold domain SMD44_RS20610 PF07517 SecA DEAD-like domain SMD44_RS20610 PF02810 SEC-C motif SMD44_RS20630 PF00557 Metallopeptidase family M24 SMD44_RS20630 PF05195 Aminopeptidase P, N-terminal domain SMD44_RS20640 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS20645 PF00155 Aminotransferase class I and II SMD44_RS20645 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS20650 PF01638 HxlR-like helix-turn-helix SMD44_RS20655 PF13460 NAD(P)H-binding SMD44_RS20660 PF02464 Competence-damaged protein SMD44_RS20660 PF18146 Damage-inducible protein CinA KH domain SMD44_RS20660 PF00994 Probable molybdopterin binding domain SMD44_RS20670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMD44_RS20675 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS20680 PF02142 MGS-like domain SMD44_RS20705 PF02630 SCO1/SenC SMD44_RS20715 PF05425 Copper resistance protein D SMD44_RS20725 PF00800 Prephenate dehydratase SMD44_RS20725 PF01842 ACT domain SMD44_RS20730 PF02403 Seryl-tRNA synthetase N-terminal domain SMD44_RS20730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS20750 PF00005 ABC transporter SMD44_RS20760 PF00005 ABC transporter SMD44_RS20770 PF00561 alpha/beta hydrolase fold SMD44_RS20770 PF00106 short chain dehydrogenase SMD44_RS20780 PF13411 MerR HTH family regulatory protein SMD44_RS20790 PF00296 Luciferase-like monooxygenase SMD44_RS20800 PF01551 Peptidase family M23 SMD44_RS20800 PF01464 Transglycosylase SLT domain SMD44_RS20800 PF10145 Phage-related minor tail protein SMD44_RS20815 PF02322 Cytochrome bd terminal oxidase subunit II SMD44_RS20825 PF00155 Aminotransferase class I and II SMD44_RS20830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SMD44_RS20830 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS20835 PF00149 Calcineurin-like phosphoesterase SMD44_RS20845 PF02342 TerD domain SMD44_RS20850 PF01964 Radical SAM ThiC family SMD44_RS20850 PF13667 ThiC-associated domain SMD44_RS20860 PF04686 Streptomyces sporulation and cell division protein, SsgA SMD44_RS20870 PF17260 Family of unknown function (DUF5326) SMD44_RS20875 PF07883 Cupin domain SMD44_RS20880 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV SMD44_RS20885 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMD44_RS20890 PF01053 Cys/Met metabolism PLP-dependent enzyme SMD44_RS20895 PF03466 LysR substrate binding domain SMD44_RS20895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS20900 PF00293 NUDIX domain SMD44_RS20905 PF00970 Oxidoreductase FAD-binding domain SMD44_RS20905 PF00175 Oxidoreductase NAD-binding domain SMD44_RS20905 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS20930 PF07690 Major Facilitator Superfamily SMD44_RS20935 PF01047 MarR family SMD44_RS20940 PF00583 Acetyltransferase (GNAT) family SMD44_RS20945 PF00144 Beta-lactamase SMD44_RS20960 PF00772 DnaB-like helicase N terminal domain SMD44_RS20960 PF03796 DnaB-like helicase C terminal domain SMD44_RS20970 PF03948 Ribosomal protein L9, C-terminal domain SMD44_RS20970 PF01281 Ribosomal protein L9, N-terminal domain SMD44_RS20975 PF01084 Ribosomal protein S18 SMD44_RS20980 PF00436 Single-strand binding protein family SMD44_RS20985 PF01250 Ribosomal protein S6 SMD44_RS21010 PF00912 Transglycosylase SMD44_RS21010 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS21020 PF01658 Myo-inositol-1-phosphate synthase SMD44_RS21025 PF07690 Major Facilitator Superfamily SMD44_RS21035 PF01743 Poly A polymerase head domain SMD44_RS21035 PF12627 Probable RNA and SrmB- binding site of polymerase A SMD44_RS21035 PF13735 tRNA nucleotidyltransferase domain 2 putative SMD44_RS21050 PF03793 PASTA domain SMD44_RS21050 PF00069 Protein kinase domain SMD44_RS21055 PF04542 Sigma-70 region 2 SMD44_RS21055 PF08281 Sigma-70, region 4 SMD44_RS21065 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS21070 PF00085 Thioredoxin SMD44_RS21080 PF17762 HTH domain found in ParB protein SMD44_RS21080 PF02195 ParB-like nuclease domain SMD44_RS21085 PF13614 AAA domain SMD44_RS21090 PF02527 rRNA small subunit methyltransferase G SMD44_RS21100 PF02096 60Kd inner membrane protein SMD44_RS21105 PF01809 Putative membrane protein insertion efficiency factor SMD44_RS21110 PF00825 Ribonuclease P SMD44_RS21115 PF00468 Ribosomal protein L34 SMD44_RS21120 PF08299 Bacterial dnaA protein helix-turn-helix SMD44_RS21120 PF00308 Bacterial dnaA protein SMD44_RS21130 PF00712 DNA polymerase III beta subunit, N-terminal domain SMD44_RS21130 PF02768 DNA polymerase III beta subunit, C-terminal domain SMD44_RS21130 PF02767 DNA polymerase III beta subunit, central domain SMD44_RS21135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS21135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SMD44_RS21140 PF02463 RecF/RecN/SMC N terminal domain SMD44_RS21145 PF05258 Dna[CI] antecedent, DciA SMD44_RS21150 PF00204 DNA gyrase B SMD44_RS21150 PF00986 DNA gyrase B subunit, carboxyl terminus SMD44_RS21150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS21150 PF01751 Toprim domain SMD44_RS21155 PF03989 DNA gyrase C-terminal domain, beta-propeller SMD44_RS21155 PF00521 DNA gyrase/topoisomerase IV, subunit A SMD44_RS21160 PF12089 Transmembrane domain of unknown function (DUF3566) SMD44_RS21195 PF00069 Protein kinase domain SMD44_RS21220 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS21220 PF17754 MftR C-terminal domain SMD44_RS21230 PF13460 NAD(P)H-binding SMD44_RS21250 PF03777 ChpA-C SMD44_RS21255 PF03777 ChpA-C SMD44_RS21285 PF13439 Glycosyltransferase Family 4 SMD44_RS21285 PF00534 Glycosyl transferases group 1 SMD44_RS21295 PF03023 Lipid II flippase MurJ SMD44_RS21305 PF02397 Bacterial sugar transferase SMD44_RS21310 PF13439 Glycosyltransferase Family 4 SMD44_RS21310 PF00534 Glycosyl transferases group 1 SMD44_RS21320 PF03777 ChpA-C SMD44_RS21335 PF03777 ChpA-C SMD44_RS21350 PF06236 Tyrosinase co-factor MelC1 SMD44_RS21355 PF00264 Common central domain of tyrosinase SMD44_RS21360 PF03777 ChpA-C SMD44_RS21375 PF01339 CheB methylesterase SMD44_RS21375 PF00072 Response regulator receiver domain SMD44_RS21380 PF08448 PAS fold SMD44_RS21380 PF03705 CheR methyltransferase, all-alpha domain SMD44_RS21380 PF01739 CheR methyltransferase, SAM binding domain SMD44_RS21380 PF01339 CheB methylesterase SMD44_RS21395 PF17258 Family of unknown function (DUF5324) SMD44_RS21400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMD44_RS21405 PF01694 Rhomboid family SMD44_RS21410 PF06781 Cell division protein CrgA SMD44_RS21420 PF04203 Sortase domain SMD44_RS21430 PF00117 Glutamine amidotransferase class-I SMD44_RS21440 PF04203 Sortase domain SMD44_RS21445 PF00069 Protein kinase domain SMD44_RS21445 PF03793 PASTA domain SMD44_RS21455 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS21460 PF01098 Cell cycle protein SMD44_RS21470 PF16697 Inner membrane component of T3SS, cytoplasmic domain SMD44_RS21475 PF00498 FHA domain SMD44_RS21475 PF12401 Protein of unknown function (DUF2662) SMD44_RS21490 PF00764 Arginosuccinate synthase SMD44_RS21495 PF01676 Metalloenzyme superfamily SMD44_RS21495 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SMD44_RS21510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS21510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS21515 PF00465 Iron-containing alcohol dehydrogenase SMD44_RS21520 PF00501 AMP-binding enzyme SMD44_RS21520 PF00668 Condensation domain SMD44_RS21520 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS21520 PF00550 Phosphopantetheine attachment site SMD44_RS21525 PF02785 Biotin carboxylase C-terminal domain SMD44_RS21525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMD44_RS21525 PF00289 Biotin carboxylase, N-terminal domain SMD44_RS21575 PF03756 A-factor biosynthesis hotdog domain SMD44_RS21580 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS21580 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS21605 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS21615 PF00465 Iron-containing alcohol dehydrogenase SMD44_RS21620 PF00202 Aminotransferase class-III SMD44_RS21625 PF13649 Methyltransferase domain SMD44_RS21635 PF00005 ABC transporter SMD44_RS21660 PF00581 Rhodanese-like domain SMD44_RS21670 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS21670 PF00175 Oxidoreductase NAD-binding domain SMD44_RS21670 PF00970 Oxidoreductase FAD-binding domain SMD44_RS21675 PF01883 Iron-sulfur cluster assembly protein SMD44_RS21680 PF05138 Phenylacetic acid catabolic protein SMD44_RS21685 PF06243 Phenylacetic acid degradation B SMD44_RS21690 PF05138 Phenylacetic acid catabolic protein SMD44_RS21705 PF00588 SpoU rRNA Methylase family SMD44_RS21715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS21715 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain SMD44_RS21715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS21720 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS21720 PF18665 Tetracyclin repressor-like, C-terminal domain SMD44_RS21725 PF13404 AsnC-type helix-turn-helix domain SMD44_RS21725 PF01037 Lrp/AsnC ligand binding domain SMD44_RS21735 PF02780 Transketolase, C-terminal domain SMD44_RS21735 PF02779 Transketolase, pyrimidine binding domain SMD44_RS21740 PF02817 e3 binding domain SMD44_RS21740 PF00364 Biotin-requiring enzyme SMD44_RS21740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMD44_RS21750 PF03454 MoeA C-terminal region (domain IV) SMD44_RS21750 PF00994 Probable molybdopterin binding domain SMD44_RS21750 PF03453 MoeA N-terminal region (domain I and II) SMD44_RS21755 PF07885 Ion channel SMD44_RS21755 PF02254 TrkA-N domain SMD44_RS21760 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS21760 PF00107 Zinc-binding dehydrogenase SMD44_RS21770 PF10759 Protein of unknown function (DUF2587) SMD44_RS21775 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS21785 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS21785 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS21795 PF00069 Protein kinase domain SMD44_RS21795 PF03793 PASTA domain SMD44_RS21800 PF03793 PASTA domain SMD44_RS21800 PF00069 Protein kinase domain SMD44_RS21810 PF00072 Response regulator receiver domain SMD44_RS21810 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS21815 PF00676 Dehydrogenase E1 component SMD44_RS21820 PF02780 Transketolase, C-terminal domain SMD44_RS21820 PF02779 Transketolase, pyrimidine binding domain SMD44_RS21825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMD44_RS21825 PF02817 e3 binding domain SMD44_RS21825 PF00364 Biotin-requiring enzyme SMD44_RS21830 PF00768 D-alanyl-D-alanine carboxypeptidase SMD44_RS21835 PF07729 FCD domain SMD44_RS21835 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS21850 PF00795 Carbon-nitrogen hydrolase SMD44_RS21860 PF02127 Aminopeptidase I zinc metalloprotease (M18) SMD44_RS21865 PF12806 Acetyl-CoA dehydrogenase C-terminal like SMD44_RS21865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS21865 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS21865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS21870 PF00561 alpha/beta hydrolase fold SMD44_RS21880 PF05726 Pirin C-terminal cupin domain SMD44_RS21880 PF02678 Pirin SMD44_RS21885 PF01594 AI-2E family transporter SMD44_RS21895 PF01336 OB-fold nucleic acid binding domain SMD44_RS21895 PF00152 tRNA synthetases class II (D, K and N) SMD44_RS21895 PF02938 GAD domain SMD44_RS21940 PF07690 Major Facilitator Superfamily SMD44_RS21970 PF09334 tRNA synthetases class I (M) SMD44_RS21970 PF08264 Anticodon-binding domain of tRNA SMD44_RS21995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS21995 PF03466 LysR substrate binding domain SMD44_RS22000 PF02031 Streptomyces extracellular neutral proteinase (M7) family SMD44_RS22025 PF12805 FUSC-like inner membrane protein yccS SMD44_RS22030 PF07690 Major Facilitator Superfamily SMD44_RS22035 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS22035 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS22065 PF00005 ABC transporter SMD44_RS22065 PF13732 Domain of unknown function (DUF4162) SMD44_RS22070 PF01061 ABC-2 type transporter SMD44_RS22135 PF00296 Luciferase-like monooxygenase SMD44_RS22145 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS22170 PF00011 Hsp20/alpha crystallin family SMD44_RS22190 PF00115 Cytochrome C and Quinol oxidase polypeptide I SMD44_RS22220 PF08000 Bacterial PH domain SMD44_RS22230 PF07690 Major Facilitator Superfamily SMD44_RS22275 PF00270 DEAD/DEAH box helicase SMD44_RS22275 PF00271 Helicase conserved C-terminal domain SMD44_RS22280 PF00313 'Cold-shock' DNA-binding domain SMD44_RS22295 PF07728 AAA domain (dynein-related subfamily) SMD44_RS22295 PF08406 CbbQ/NirQ/NorQ C-terminal SMD44_RS22300 PF09967 VWA-like domain (DUF2201) SMD44_RS22300 PF13203 Putative metallopeptidase domain SMD44_RS22310 PF05651 Putative sugar diacid recognition SMD44_RS22310 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS22310 PF17853 GGDEF-like domain SMD44_RS22320 PF00245 Alkaline phosphatase SMD44_RS22340 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS22350 PF00891 O-methyltransferase domain SMD44_RS22355 PF01494 FAD binding domain SMD44_RS22360 PF01402 Ribbon-helix-helix protein, copG family SMD44_RS22365 PF01850 PIN domain SMD44_RS22370 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS22370 PF07702 UTRA domain SMD44_RS22405 PF00692 dUTPase SMD44_RS22465 PF02665 Nitrate reductase gamma subunit SMD44_RS22465 PF02754 Cysteine-rich domain SMD44_RS22465 PF13183 4Fe-4S dicluster domain SMD44_RS22470 PF00012 Hsp70 protein SMD44_RS22475 PF01025 GrpE SMD44_RS22480 PF00226 DnaJ domain SMD44_RS22480 PF01556 DnaJ C terminal domain SMD44_RS22480 PF00684 DnaJ central domain SMD44_RS22485 PF13411 MerR HTH family regulatory protein SMD44_RS22505 PF00072 Response regulator receiver domain SMD44_RS22505 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS22525 PF00072 Response regulator receiver domain SMD44_RS22525 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS22555 PF17871 AAA lid domain SMD44_RS22555 PF02861 Clp amino terminal domain, pathogenicity island component SMD44_RS22555 PF07724 AAA domain (Cdc48 subfamily) SMD44_RS22555 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS22555 PF10431 C-terminal, D2-small domain, of ClpB protein SMD44_RS22570 PF00155 Aminotransferase class I and II SMD44_RS22600 PF00156 Phosphoribosyl transferase domain SMD44_RS22605 PF01116 Fructose-bisphosphate aldolase class-II SMD44_RS22610 PF00155 Aminotransferase class I and II SMD44_RS22620 PF03301 Tryptophan 2,3-dioxygenase SMD44_RS22625 PF00266 Aminotransferase class-V SMD44_RS22640 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS22640 PF00072 Response regulator receiver domain SMD44_RS22645 PF00067 Cytochrome P450 SMD44_RS22655 PF13732 Domain of unknown function (DUF4162) SMD44_RS22655 PF00005 ABC transporter SMD44_RS22670 PF00709 Adenylosuccinate synthetase SMD44_RS22680 PF00069 Protein kinase domain SMD44_RS22680 PF00400 WD domain, G-beta repeat SMD44_RS22710 PF01965 DJ-1/PfpI family SMD44_RS22740 PF00202 Aminotransferase class-III SMD44_RS22745 PF07729 FCD domain SMD44_RS22745 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS22750 PF00535 Glycosyl transferase family 2 SMD44_RS22765 PF02575 YbaB/EbfC DNA-binding family SMD44_RS22770 PF02132 RecR protein SMD44_RS22770 PF13662 Toprim domain SMD44_RS22770 PF00633 Helix-hairpin-helix motif SMD44_RS22795 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS22795 PF00072 Response regulator receiver domain SMD44_RS22800 PF00672 HAMP domain SMD44_RS22800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS22800 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS22805 PF01645 Conserved region in glutamate synthase SMD44_RS22810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS22810 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS22810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS22845 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMD44_RS22845 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMD44_RS22850 PF08281 Sigma-70, region 4 SMD44_RS22850 PF04542 Sigma-70 region 2 SMD44_RS22865 PF00326 Prolyl oligopeptidase family SMD44_RS22875 PF01965 DJ-1/PfpI family SMD44_RS22880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS22880 PF13492 GAF domain SMD44_RS22880 PF13185 GAF domain SMD44_RS22880 PF07730 Histidine kinase SMD44_RS22885 PF01042 Endoribonuclease L-PSP SMD44_RS22890 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS22890 PF00072 Response regulator receiver domain SMD44_RS22950 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS22950 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS22965 PF12833 Helix-turn-helix domain SMD44_RS22965 PF01965 DJ-1/PfpI family SMD44_RS23050 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS23050 PF00931 NB-ARC domain SMD44_RS23050 PF03704 Bacterial transcriptional activator domain SMD44_RS23125 PF00149 Calcineurin-like phosphoesterase SMD44_RS23125 PF10518 TAT (twin-arginine translocation) pathway signal sequence SMD44_RS23135 PF00912 Transglycosylase SMD44_RS23145 PF02467 Transcription factor WhiB SMD44_RS23150 PF02374 Anion-transporting ATPase SMD44_RS23150 PF17886 HSP20-like domain found in ArsA SMD44_RS23155 PF02374 Anion-transporting ATPase SMD44_RS23175 PF00753 Metallo-beta-lactamase superfamily SMD44_RS23175 PF16123 Hydroxyacylglutathione hydrolase C-terminus SMD44_RS23185 PF13545 Crp-like helix-turn-helix domain SMD44_RS23185 PF00027 Cyclic nucleotide-binding domain SMD44_RS23190 PF00730 HhH-GPD superfamily base excision DNA repair protein SMD44_RS23190 PF00633 Helix-hairpin-helix motif SMD44_RS23190 PF10576 Iron-sulfur binding domain of endonuclease III SMD44_RS23195 PF00293 NUDIX domain SMD44_RS23210 PF00561 alpha/beta hydrolase fold SMD44_RS23220 PF06965 Na+/H+ antiporter 1 SMD44_RS23225 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS23225 PF00501 AMP-binding enzyme SMD44_RS23225 PF16177 Acetyl-coenzyme A synthetase N-terminus SMD44_RS23265 PF00437 Type II/IV secretion system protein SMD44_RS23295 PF00270 DEAD/DEAH box helicase SMD44_RS23295 PF00271 Helicase conserved C-terminal domain SMD44_RS23295 PF09369 Domain of unknown function (DUF1998) SMD44_RS23300 PF01740 STAS domain SMD44_RS23305 PF13581 Histidine kinase-like ATPase domain SMD44_RS23310 PF03030 Inorganic H+ pyrophosphatase SMD44_RS23320 PF17827 PrmC N-terminal domain SMD44_RS23320 PF05175 Methyltransferase small domain SMD44_RS23335 PF01131 DNA topoisomerase SMD44_RS23335 PF01751 Toprim domain SMD44_RS23335 PF13368 Topoisomerase C-terminal repeat SMD44_RS23340 PF02223 Thymidylate kinase SMD44_RS23345 PF12169 DNA polymerase III subunits gamma and tau domain III SMD44_RS23350 PF00561 alpha/beta hydrolase fold SMD44_RS23380 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS23380 PF00501 AMP-binding enzyme SMD44_RS23385 PF03033 Glycosyltransferase family 28 N-terminal domain SMD44_RS23400 PF13649 Methyltransferase domain SMD44_RS23405 PF00561 alpha/beta hydrolase fold SMD44_RS23440 PF12697 Alpha/beta hydrolase family SMD44_RS23445 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS23445 PF00107 Zinc-binding dehydrogenase SMD44_RS23455 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS23455 PF00072 Response regulator receiver domain SMD44_RS23470 PF00857 Isochorismatase family SMD44_RS23475 PF00561 alpha/beta hydrolase fold SMD44_RS23480 PF00561 alpha/beta hydrolase fold SMD44_RS23485 PF00211 Adenylate and Guanylate cyclase catalytic domain SMD44_RS23485 PF13191 AAA ATPase domain SMD44_RS23505 PF00072 Response regulator receiver domain SMD44_RS23505 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS23525 PF03704 Bacterial transcriptional activator domain SMD44_RS23525 PF00931 NB-ARC domain SMD44_RS23525 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS23530 PF01612 3'-5' exonuclease SMD44_RS23530 PF01367 5'-3' exonuclease, C-terminal SAM fold SMD44_RS23530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMD44_RS23530 PF00476 DNA polymerase family A SMD44_RS23535 PF02540 NAD synthase SMD44_RS23535 PF00795 Carbon-nitrogen hydrolase SMD44_RS23560 PF09278 MerR, DNA binding SMD44_RS23560 PF00376 MerR family regulatory protein SMD44_RS23585 PF00253 Ribosomal protein S14p/S29e SMD44_RS23590 PF00830 Ribosomal L28 family SMD44_RS23595 PF00471 Ribosomal protein L33 SMD44_RS23600 PF01197 Ribosomal protein L31 SMD44_RS23605 PF02492 CobW/HypB/UreG, nucleotide-binding domain SMD44_RS23605 PF07683 Cobalamin synthesis protein cobW C-terminal domain SMD44_RS23610 PF01084 Ribosomal protein S18 SMD44_RS23630 PF00171 Aldehyde dehydrogenase family SMD44_RS23635 PF04978 Protein of unknown function (DUF664) SMD44_RS23645 PF13732 Domain of unknown function (DUF4162) SMD44_RS23645 PF00005 ABC transporter SMD44_RS23660 PF13411 MerR HTH family regulatory protein SMD44_RS23660 PF07739 TipAS antibiotic-recognition domain SMD44_RS23665 PF09335 SNARE associated Golgi protein SMD44_RS23675 PF00719 Inorganic pyrophosphatase SMD44_RS23680 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family SMD44_RS23690 PF09179 TilS substrate binding domain SMD44_RS23690 PF01171 PP-loop family SMD44_RS23695 PF00156 Phosphoribosyl transferase domain SMD44_RS23700 PF01434 Peptidase family M41 SMD44_RS23700 PF06480 FtsH Extracellular SMD44_RS23700 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS23700 PF17862 AAA+ lid domain SMD44_RS23705 PF01227 GTP cyclohydrolase I SMD44_RS23715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMD44_RS23720 PF02152 Dihydroneopterin aldolase SMD44_RS23735 PF00809 Pterin binding enzyme SMD44_RS23740 PF00152 tRNA synthetases class II (D, K and N) SMD44_RS23740 PF09924 Uncharacterised conserved protein (DUF2156) SMD44_RS23740 PF16995 Transmembrane region of lysyl-tRNA synthetase SMD44_RS23740 PF01336 OB-fold nucleic acid binding domain SMD44_RS23750 PF00005 ABC transporter SMD44_RS23750 PF00571 CBS domain SMD44_RS23755 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS23760 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS23785 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SMD44_RS23795 PF07730 Histidine kinase SMD44_RS23795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS23795 PF05384 Sensor protein DegS SMD44_RS23800 PF00072 Response regulator receiver domain SMD44_RS23800 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS23815 PF01212 Beta-eliminating lyase SMD44_RS23825 PF02569 Pantoate-beta-alanine ligase SMD44_RS23830 PF00890 FAD binding domain SMD44_RS23830 PF02910 Fumarate reductase flavoprotein C-term SMD44_RS23835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SMD44_RS23835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SMD44_RS23840 PF03309 Type III pantothenate kinase SMD44_RS23865 PF00583 Acetyltransferase (GNAT) family SMD44_RS23870 PF11774 Lsr2 SMD44_RS23885 PF07724 AAA domain (Cdc48 subfamily) SMD44_RS23885 PF17871 AAA lid domain SMD44_RS23885 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS23885 PF10431 C-terminal, D2-small domain, of ClpB protein SMD44_RS23885 PF02861 Clp amino terminal domain, pathogenicity island component SMD44_RS23900 PF01551 Peptidase family M23 SMD44_RS23900 PF01476 LysM domain SMD44_RS23900 PF08525 Opacity-associated protein A N-terminal motif SMD44_RS23905 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS23905 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS23910 PF07690 Major Facilitator Superfamily SMD44_RS23915 PF12833 Helix-turn-helix domain SMD44_RS23920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMD44_RS23925 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS23925 PF00672 HAMP domain SMD44_RS23925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS23930 PF00072 Response regulator receiver domain SMD44_RS23930 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS23940 PF04542 Sigma-70 region 2 SMD44_RS23940 PF08281 Sigma-70, region 4 SMD44_RS23945 PF00633 Helix-hairpin-helix motif SMD44_RS23945 PF10576 Iron-sulfur binding domain of endonuclease III SMD44_RS23945 PF00730 HhH-GPD superfamily base excision DNA repair protein SMD44_RS23950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS23950 PF07730 Histidine kinase SMD44_RS23955 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS23955 PF00072 Response regulator receiver domain SMD44_RS23970 PF12826 Helix-hairpin-helix motif SMD44_RS23970 PF10635 DisA bacterial checkpoint controller linker region SMD44_RS23970 PF02457 DisA bacterial checkpoint controller nucleotide-binding SMD44_RS23975 PF18073 Rubredoxin metal binding domain SMD44_RS23990 PF02541 Ppx/GppA phosphatase family SMD44_RS23995 PF01261 Xylose isomerase-like TIM barrel SMD44_RS24005 PF00920 Dehydratase family SMD44_RS24015 PF00400 WD domain, G-beta repeat SMD44_RS24015 PF00069 Protein kinase domain SMD44_RS24025 PF08241 Methyltransferase domain SMD44_RS24030 PF00005 ABC transporter SMD44_RS24035 PF01061 ABC-2 type transporter SMD44_RS24045 PF00857 Isochorismatase family SMD44_RS24050 PF12833 Helix-turn-helix domain SMD44_RS24050 PF01965 DJ-1/PfpI family SMD44_RS24055 PF00579 tRNA synthetases class I (W and Y) SMD44_RS24080 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS24090 PF00850 Histone deacetylase domain SMD44_RS24095 PF15698 Phosphatase SMD44_RS24100 PF12728 Helix-turn-helix domain SMD44_RS24110 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS24115 PF01553 Acyltransferase SMD44_RS24125 PF08281 Sigma-70, region 4 SMD44_RS24125 PF04542 Sigma-70 region 2 SMD44_RS24135 PF05768 Glutaredoxin-like domain (DUF836) SMD44_RS24140 PF02629 CoA binding domain SMD44_RS24140 PF06971 Putative DNA-binding protein N-terminus SMD44_RS24145 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SMD44_RS24145 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SMD44_RS24145 PF01488 Shikimate / quinate 5-dehydrogenase SMD44_RS24150 PF03900 Porphobilinogen deaminase, C-terminal domain SMD44_RS24150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SMD44_RS24160 PF00490 Delta-aminolevulinic acid dehydratase SMD44_RS24165 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS24165 PF00550 Phosphopantetheine attachment site SMD44_RS24165 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS24165 PF08659 KR domain SMD44_RS24165 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS24165 PF14765 Polyketide synthase dehydratase SMD44_RS24165 PF00698 Acyl transferase domain SMD44_RS24165 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS24170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS24170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS24190 PF00155 Aminotransferase class I and II SMD44_RS24195 PF05746 DALR anticodon binding domain SMD44_RS24195 PF00750 tRNA synthetases class I (R) SMD44_RS24195 PF03485 Arginyl tRNA synthetase N terminal domain SMD44_RS24200 PF01921 tRNA synthetases class I (K) SMD44_RS24225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMD44_RS24225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMD44_RS24230 PF13649 Methyltransferase domain SMD44_RS24235 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding SMD44_RS24270 PF01139 tRNA-splicing ligase RtcB SMD44_RS24280 PF00106 short chain dehydrogenase SMD44_RS24300 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain SMD44_RS24310 PF03466 LysR substrate binding domain SMD44_RS24310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS24320 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS24345 PF00202 Aminotransferase class-III SMD44_RS24350 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS24360 PF00578 AhpC/TSA family SMD44_RS24370 PF05140 ResB-like family SMD44_RS24375 PF01578 Cytochrome C assembly protein SMD44_RS24380 PF04542 Sigma-70 region 2 SMD44_RS24380 PF08281 Sigma-70, region 4 SMD44_RS24395 PF14226 non-haem dioxygenase in morphine synthesis N-terminal SMD44_RS24395 PF03171 2OG-Fe(II) oxygenase superfamily SMD44_RS24405 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SMD44_RS24410 PF01040 UbiA prenyltransferase family SMD44_RS24415 PF02441 Flavoprotein SMD44_RS24425 PF04055 Radical SAM superfamily SMD44_RS24435 PF00375 Sodium:dicarboxylate symporter family SMD44_RS24440 PF13977 BetI-type transcriptional repressor, C-terminal SMD44_RS24440 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS24455 PF00561 alpha/beta hydrolase fold SMD44_RS24465 PF07690 Major Facilitator Superfamily SMD44_RS24475 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term SMD44_RS24475 PF12833 Helix-turn-helix domain SMD44_RS24495 PF00501 AMP-binding enzyme SMD44_RS24535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS24540 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS24545 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS24545 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS24550 PF00005 ABC transporter SMD44_RS24550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS24560 PF00313 'Cold-shock' DNA-binding domain SMD44_RS24565 PF02621 Menaquinone biosynthesis SMD44_RS24585 PF01580 FtsK/SpoIIIE family SMD44_RS24655 PF04978 Protein of unknown function (DUF664) SMD44_RS24660 PF00089 Trypsin SMD44_RS24675 PF00437 Type II/IV secretion system protein SMD44_RS24720 PF04055 Radical SAM superfamily SMD44_RS24730 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS24935 PF01381 Helix-turn-helix SMD44_RS24980 PF00145 C-5 cytosine-specific DNA methylase SMD44_RS24985 PF03837 RecT family SMD44_RS24990 PF09588 YqaJ-like viral recombinase domain SMD44_RS25010 PF01476 LysM domain SMD44_RS25010 PF00877 NlpC/P60 family SMD44_RS25010 PF08239 Bacterial SH3 domain SMD44_RS25020 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SMD44_RS25025 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SMD44_RS25030 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SMD44_RS25035 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit SMD44_RS25045 PF10531 SLBB domain SMD44_RS25045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit SMD44_RS25045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region SMD44_RS25050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SMD44_RS25050 PF01568 Molydopterin dinucleotide binding domain SMD44_RS25050 PF00384 Molybdopterin oxidoreductase SMD44_RS25050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMD44_RS25055 PF00146 NADH dehydrogenase SMD44_RS25060 PF12838 4Fe-4S dicluster domain SMD44_RS25065 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SMD44_RS25070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SMD44_RS25075 PF00361 Proton-conducting membrane transporter SMD44_RS25075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SMD44_RS25080 PF00361 Proton-conducting membrane transporter SMD44_RS25085 PF00361 Proton-conducting membrane transporter SMD44_RS25090 PF00570 HRDC domain SMD44_RS25090 PF16124 RecQ zinc-binding SMD44_RS25090 PF09382 RQC domain SMD44_RS25090 PF00271 Helicase conserved C-terminal domain SMD44_RS25090 PF00270 DEAD/DEAH box helicase SMD44_RS25130 PF00348 Polyprenyl synthetase SMD44_RS25145 PF00005 ABC transporter SMD44_RS25160 PF01483 Proprotein convertase P-domain SMD44_RS25160 PF04389 Peptidase family M28 SMD44_RS25175 PF00583 Acetyltransferase (GNAT) family SMD44_RS25180 PF12833 Helix-turn-helix domain SMD44_RS25180 PF01965 DJ-1/PfpI family SMD44_RS25185 PF07883 Cupin domain SMD44_RS25200 PF01638 HxlR-like helix-turn-helix SMD44_RS25205 PF07690 Major Facilitator Superfamily SMD44_RS25210 PF12833 Helix-turn-helix domain SMD44_RS25220 PF00892 EamA-like transporter family SMD44_RS25225 PF05368 NmrA-like family SMD44_RS25230 PF01638 HxlR-like helix-turn-helix SMD44_RS25235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS25240 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SMD44_RS25240 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SMD44_RS25240 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SMD44_RS25245 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS25245 PF00072 Response regulator receiver domain SMD44_RS25260 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 SMD44_RS25265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit SMD44_RS25270 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit SMD44_RS25275 PF00146 NADH dehydrogenase SMD44_RS25280 PF00037 4Fe-4S binding domain SMD44_RS25290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SMD44_RS25295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SMD44_RS25295 PF00361 Proton-conducting membrane transporter SMD44_RS25295 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus SMD44_RS25300 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus SMD44_RS25300 PF00361 Proton-conducting membrane transporter SMD44_RS25305 PF00361 Proton-conducting membrane transporter SMD44_RS25310 PF01435 Peptidase family M48 SMD44_RS25315 PF03733 Inner membrane component domain SMD44_RS25320 PF04226 Transglycosylase associated protein SMD44_RS25325 PF04461 Protein of unknown function (DUF520) SMD44_RS25340 PF13460 NAD(P)H-binding SMD44_RS25360 PF00471 Ribosomal protein L33 SMD44_RS25365 PF13452 N-terminal half of MaoC dehydratase SMD44_RS25380 PF07690 Major Facilitator Superfamily SMD44_RS25385 PF01565 FAD binding domain SMD44_RS25385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SMD44_RS25390 PF00962 Adenosine/AMP deaminase SMD44_RS25395 PF00155 Aminotransferase class I and II SMD44_RS25410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SMD44_RS25415 PF02357 Transcription termination factor nusG SMD44_RS25425 PF03946 Ribosomal protein L11, N-terminal domain SMD44_RS25425 PF00298 Ribosomal protein L11, RNA binding domain SMD44_RS25430 PF00687 Ribosomal protein L1p/L10e family SMD44_RS25445 PF00466 Ribosomal protein L10 SMD44_RS25450 PF16320 Ribosomal protein L7/L12 dimerisation domain SMD44_RS25450 PF00542 Ribosomal protein L7/L12 C-terminal domain SMD44_RS25460 PF04561 RNA polymerase Rpb2, domain 2 SMD44_RS25460 PF04563 RNA polymerase beta subunit SMD44_RS25460 PF04565 RNA polymerase Rpb2, domain 3 SMD44_RS25460 PF10385 RNA polymerase beta subunit external 1 domain SMD44_RS25460 PF04560 RNA polymerase Rpb2, domain 7 SMD44_RS25460 PF00562 RNA polymerase Rpb2, domain 6 SMD44_RS25465 PF05000 RNA polymerase Rpb1, domain 4 SMD44_RS25465 PF04997 RNA polymerase Rpb1, domain 1 SMD44_RS25465 PF04998 RNA polymerase Rpb1, domain 5 SMD44_RS25465 PF00623 RNA polymerase Rpb1, domain 2 SMD44_RS25465 PF04983 RNA polymerase Rpb1, domain 3 SMD44_RS25475 PF00164 Ribosomal protein S12/S23 SMD44_RS25480 PF00177 Ribosomal protein S7p/S5e SMD44_RS25485 PF03764 Elongation factor G, domain IV SMD44_RS25485 PF00679 Elongation factor G C-terminus SMD44_RS25485 PF00009 Elongation factor Tu GTP binding domain SMD44_RS25485 PF14492 Elongation Factor G, domain II SMD44_RS25485 PF03144 Elongation factor Tu domain 2 SMD44_RS25490 PF00009 Elongation factor Tu GTP binding domain SMD44_RS25490 PF03144 Elongation factor Tu domain 2 SMD44_RS25490 PF03143 Elongation factor Tu C-terminal domain SMD44_RS25495 PF00338 Ribosomal protein S10p/S20e SMD44_RS25500 PF00297 Ribosomal protein L3 SMD44_RS25505 PF00573 Ribosomal protein L4/L1 family SMD44_RS25510 PF00276 Ribosomal protein L23 SMD44_RS25515 PF00181 Ribosomal Proteins L2, RNA binding domain SMD44_RS25515 PF03947 Ribosomal Proteins L2, C-terminal domain SMD44_RS25520 PF00203 Ribosomal protein S19 SMD44_RS25525 PF00237 Ribosomal protein L22p/L17e SMD44_RS25530 PF07650 KH domain SMD44_RS25530 PF00189 Ribosomal protein S3, C-terminal domain SMD44_RS25535 PF00252 Ribosomal protein L16p/L10e SMD44_RS25540 PF00831 Ribosomal L29 protein SMD44_RS25545 PF00366 Ribosomal protein S17 SMD44_RS25550 PF00238 Ribosomal protein L14p/L23e SMD44_RS25555 PF00467 KOW motif SMD44_RS25555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SMD44_RS25560 PF00281 Ribosomal protein L5 SMD44_RS25560 PF00673 ribosomal L5P family C-terminus SMD44_RS25565 PF00253 Ribosomal protein S14p/S29e SMD44_RS25575 PF00410 Ribosomal protein S8 SMD44_RS25580 PF00347 Ribosomal protein L6 SMD44_RS25585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SMD44_RS25590 PF03719 Ribosomal protein S5, C-terminal domain SMD44_RS25590 PF00333 Ribosomal protein S5, N-terminal domain SMD44_RS25595 PF00327 Ribosomal protein L30p/L7e SMD44_RS25600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SMD44_RS25605 PF00344 SecY translocase SMD44_RS25610 PF05191 Adenylate kinase, active site lid SMD44_RS25615 PF00557 Metallopeptidase family M24 SMD44_RS25620 PF01176 Translation initiation factor 1A / IF-1 SMD44_RS25625 PF00444 Ribosomal protein L36 SMD44_RS25630 PF00416 Ribosomal protein S13/S18 SMD44_RS25635 PF00411 Ribosomal protein S11 SMD44_RS25640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SMD44_RS25640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SMD44_RS25640 PF01000 RNA polymerase Rpb3/RpoA insert domain SMD44_RS25645 PF01196 Ribosomal protein L17 SMD44_RS25650 PF01416 tRNA pseudouridine synthase SMD44_RS25665 PF00572 Ribosomal protein L13 SMD44_RS25670 PF00380 Ribosomal protein S9/S16 SMD44_RS25675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMD44_RS25675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMD44_RS25675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMD44_RS25675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMD44_RS25685 PF00485 Phosphoribulokinase / Uridine kinase family SMD44_RS25690 PF01380 SIS domain SMD44_RS25695 PF01648 4'-phosphopantetheinyl transferase superfamily SMD44_RS25700 PF03853 YjeF-related protein N-terminus SMD44_RS25700 PF01256 Carbohydrate kinase SMD44_RS25705 PF01168 Alanine racemase, N-terminal domain SMD44_RS25705 PF00842 Alanine racemase, C-terminal domain SMD44_RS25715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMD44_RS25730 PF00583 Acetyltransferase (GNAT) family SMD44_RS25730 PF00814 Glycoprotease family SMD44_RS25740 PF00814 Glycoprotease family SMD44_RS25755 PF07690 Major Facilitator Superfamily SMD44_RS25760 PF18096 THUMP domain-like SMD44_RS25765 PF01522 Polysaccharide deacetylase SMD44_RS25770 PF00166 Chaperonin 10 Kd subunit SMD44_RS25775 PF00118 TCP-1/cpn60 chaperonin family SMD44_RS25780 PF00106 short chain dehydrogenase SMD44_RS25785 PF07732 Multicopper oxidase SMD44_RS25785 PF07731 Multicopper oxidase SMD44_RS25795 PF03466 LysR substrate binding domain SMD44_RS25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS25800 PF02467 Transcription factor WhiB SMD44_RS25805 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS25805 PF00072 Response regulator receiver domain SMD44_RS25810 PF04545 Sigma-70, region 4 SMD44_RS25810 PF04542 Sigma-70 region 2 SMD44_RS25815 PF00478 IMP dehydrogenase / GMP reductase domain SMD44_RS25815 PF00571 CBS domain SMD44_RS25820 PF00478 IMP dehydrogenase / GMP reductase domain SMD44_RS25830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SMD44_RS25830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SMD44_RS25830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SMD44_RS25835 PF01266 FAD dependent oxidoreductase SMD44_RS25835 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SMD44_RS25840 PF03793 PASTA domain SMD44_RS25840 PF00069 Protein kinase domain SMD44_RS25850 PF00069 Protein kinase domain SMD44_RS25855 PF00069 Protein kinase domain SMD44_RS25860 PF00069 Protein kinase domain SMD44_RS25865 PF00069 Protein kinase domain SMD44_RS25870 PF00171 Aldehyde dehydrogenase family SMD44_RS25875 PF05199 GMC oxidoreductase SMD44_RS25900 PF02540 NAD synthase SMD44_RS25900 PF00117 Glutamine amidotransferase class-I SMD44_RS25900 PF00958 GMP synthase C terminal domain SMD44_RS25910 PF00596 Class II Aldolase and Adducin N-terminal domain SMD44_RS25940 PF00072 Response regulator receiver domain SMD44_RS25940 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS25945 PF00877 NlpC/P60 family SMD44_RS25955 PF00877 NlpC/P60 family SMD44_RS25960 PF13361 UvrD-like helicase C-terminal domain SMD44_RS25960 PF00580 UvrD/REP helicase N-terminal domain SMD44_RS25965 PF01551 Peptidase family M23 SMD44_RS25975 PF02310 B12 binding domain SMD44_RS25975 PF01642 Methylmalonyl-CoA mutase SMD44_RS25995 PF07728 AAA domain (dynein-related subfamily) SMD44_RS26005 PF05762 VWA domain containing CoxE-like protein SMD44_RS26010 PF08442 ATP-grasp domain SMD44_RS26010 PF00549 CoA-ligase SMD44_RS26015 PF00549 CoA-ligase SMD44_RS26015 PF02629 CoA binding domain SMD44_RS26040 PF01808 AICARFT/IMPCHase bienzyme SMD44_RS26040 PF02142 MGS-like domain SMD44_RS26050 PF00069 Protein kinase domain SMD44_RS26050 PF03793 PASTA domain SMD44_RS26055 PF06271 RDD family SMD44_RS26060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SMD44_RS26060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SMD44_RS26070 PF07730 Histidine kinase SMD44_RS26075 PF00072 Response regulator receiver domain SMD44_RS26075 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS26105 PF00056 lactate/malate dehydrogenase, NAD binding domain SMD44_RS26105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMD44_RS26135 PF07690 Major Facilitator Superfamily SMD44_RS26140 PF03466 LysR substrate binding domain SMD44_RS26140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS26145 PF01381 Helix-turn-helix SMD44_RS26160 PF00171 Aldehyde dehydrogenase family SMD44_RS26165 PF05199 GMC oxidoreductase SMD44_RS26165 PF00732 GMC oxidoreductase SMD44_RS26170 PF00005 ABC transporter SMD44_RS26170 PF00571 CBS domain SMD44_RS26175 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS26190 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS26195 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS26195 PF00155 Aminotransferase class I and II SMD44_RS26205 PF02082 Transcriptional regulator SMD44_RS26230 PF03738 Glutathionylspermidine synthase preATP-grasp SMD44_RS26260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS26270 PF03176 MMPL family SMD44_RS26295 PF07690 Major Facilitator Superfamily SMD44_RS26315 PF13302 Acetyltransferase (GNAT) domain SMD44_RS26345 PF12680 SnoaL-like domain SMD44_RS26345 PF04542 Sigma-70 region 2 SMD44_RS26345 PF08281 Sigma-70, region 4 SMD44_RS26350 PF08241 Methyltransferase domain SMD44_RS26355 PF04978 Protein of unknown function (DUF664) SMD44_RS26365 PF13545 Crp-like helix-turn-helix domain SMD44_RS26365 PF00027 Cyclic nucleotide-binding domain SMD44_RS26385 PF02525 Flavodoxin-like fold SMD44_RS26390 PF16884 N-terminal domain of oxidoreductase SMD44_RS26390 PF00107 Zinc-binding dehydrogenase SMD44_RS26400 PF00202 Aminotransferase class-III SMD44_RS26405 PF00464 Serine hydroxymethyltransferase SMD44_RS26420 PF04542 Sigma-70 region 2 SMD44_RS26420 PF08281 Sigma-70, region 4 SMD44_RS26440 PF00106 short chain dehydrogenase SMD44_RS26450 PF01569 PAP2 superfamily SMD44_RS26455 PF01040 UbiA prenyltransferase family SMD44_RS26465 PF03631 Virulence factor BrkB SMD44_RS26470 PF00768 D-alanyl-D-alanine carboxypeptidase SMD44_RS26480 PF00149 Calcineurin-like phosphoesterase SMD44_RS26485 PF00672 HAMP domain SMD44_RS26485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS26485 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS26490 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS26490 PF00072 Response regulator receiver domain SMD44_RS26505 PF04545 Sigma-70, region 4 SMD44_RS26505 PF04542 Sigma-70 region 2 SMD44_RS26525 PF01047 MarR family SMD44_RS26550 PF13247 4Fe-4S dicluster domain SMD44_RS26550 PF14711 Respiratory nitrate reductase beta C-terminal SMD44_RS26560 PF00384 Molybdopterin oxidoreductase SMD44_RS26560 PF02613 Nitrate reductase delta subunit SMD44_RS26560 PF02665 Nitrate reductase gamma subunit SMD44_RS26570 PF13085 2Fe-2S iron-sulfur cluster binding domain SMD44_RS26575 PF02910 Fumarate reductase flavoprotein C-term SMD44_RS26575 PF00890 FAD binding domain SMD44_RS26585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SMD44_RS26600 PF02838 Glycosyl hydrolase family 20, domain 2 SMD44_RS26600 PF00728 Glycosyl hydrolase family 20, catalytic domain SMD44_RS26600 PF07691 PA14 domain SMD44_RS26630 PF04542 Sigma-70 region 2 SMD44_RS26630 PF04545 Sigma-70, region 4 SMD44_RS26650 PF01494 FAD binding domain SMD44_RS26655 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS26655 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS26670 PF00535 Glycosyl transferase family 2 SMD44_RS26680 PF02348 Cytidylyltransferase SMD44_RS26685 PF08666 SAF domain SMD44_RS26685 PF03102 NeuB family SMD44_RS26760 PF04107 Glutamate-cysteine ligase family 2(GCS2) SMD44_RS26760 PF01546 Peptidase family M20/M25/M40 SMD44_RS26765 PF02608 ABC transporter substrate-binding protein PnrA-like SMD44_RS26770 PF02608 ABC transporter substrate-binding protein PnrA-like SMD44_RS26775 PF00005 ABC transporter SMD44_RS26785 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS26790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMD44_RS26795 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SMD44_RS26795 PF00591 Glycosyl transferase family, a/b domain SMD44_RS26795 PF02885 Glycosyl transferase family, helical bundle domain SMD44_RS26800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS26800 PF03466 LysR substrate binding domain SMD44_RS26805 PF07690 Major Facilitator Superfamily SMD44_RS26810 PF12680 SnoaL-like domain SMD44_RS26810 PF08281 Sigma-70, region 4 SMD44_RS26810 PF04542 Sigma-70 region 2 SMD44_RS26825 PF00962 Adenosine/AMP deaminase SMD44_RS26855 PF00072 Response regulator receiver domain SMD44_RS26855 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS26860 PF04542 Sigma-70 region 2 SMD44_RS26860 PF08281 Sigma-70, region 4 SMD44_RS26875 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS26875 PF00072 Response regulator receiver domain SMD44_RS26880 PF05384 Sensor protein DegS SMD44_RS26880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS26880 PF07730 Histidine kinase SMD44_RS26890 PF00171 Aldehyde dehydrogenase family SMD44_RS26895 PF00171 Aldehyde dehydrogenase family SMD44_RS26900 PF01791 DeoC/LacD family aldolase SMD44_RS26905 PF00553 Cellulose binding domain SMD44_RS26905 PF00041 Fibronectin type III domain SMD44_RS26905 PF00704 Glycosyl hydrolases family 18 SMD44_RS26930 PF01048 Phosphorylase superfamily SMD44_RS26940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMD44_RS26940 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS26945 PF08220 DeoR-like helix-turn-helix domain SMD44_RS26945 PF00455 DeoR C terminal sensor domain SMD44_RS26955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMD44_RS26955 PF00289 Biotin carboxylase, N-terminal domain SMD44_RS26955 PF00364 Biotin-requiring enzyme SMD44_RS26955 PF02785 Biotin carboxylase C-terminal domain SMD44_RS26965 PF02545 Maf-like protein SMD44_RS26985 PF01039 Carboxyl transferase domain SMD44_RS26990 PF08279 HTH domain SMD44_RS26990 PF03099 Biotin/lipoate A/B protein ligase family SMD44_RS26990 PF02237 Biotin protein ligase C terminal domain SMD44_RS26995 PF16701 Adenylate cyclase regulatory domain SMD44_RS26995 PF00211 Adenylate and Guanylate cyclase catalytic domain SMD44_RS27000 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS27010 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS27015 PF00221 Aromatic amino acid lyase SMD44_RS27040 PF00082 Subtilase family SMD44_RS27040 PF05922 Peptidase inhibitor I9 SMD44_RS27050 PF01638 HxlR-like helix-turn-helix SMD44_RS27070 PF00107 Zinc-binding dehydrogenase SMD44_RS27070 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS27080 PF00561 alpha/beta hydrolase fold SMD44_RS27085 PF01625 Peptide methionine sulfoxide reductase SMD44_RS27095 PF01053 Cys/Met metabolism PLP-dependent enzyme SMD44_RS27105 PF04542 Sigma-70 region 2 SMD44_RS27105 PF08281 Sigma-70, region 4 SMD44_RS27110 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMD44_RS27110 PF05491 RuvB C-terminal winged helix domain SMD44_RS27110 PF17864 RuvB AAA lid domain SMD44_RS27115 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS27115 PF13291 ACT domain SMD44_RS27120 PF00005 ABC transporter SMD44_RS27120 PF13732 Domain of unknown function (DUF4162) SMD44_RS27125 PF01061 ABC-2 type transporter SMD44_RS27130 PF00072 Response regulator receiver domain SMD44_RS27130 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS27145 PF01272 Transcription elongation factor, GreA/GreB, C-term SMD44_RS27145 PF03449 Transcription elongation factor, N-terminal SMD44_RS27155 PF02585 GlcNAc-PI de-N-acetylase SMD44_RS27185 PF03190 Protein of unknown function, DUF255 SMD44_RS27195 PF03006 Haemolysin-III related SMD44_RS27200 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain SMD44_RS27200 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain SMD44_RS27210 PF00155 Aminotransferase class I and II SMD44_RS27225 PF07969 Amidohydrolase family SMD44_RS27235 PF00294 pfkB family carbohydrate kinase SMD44_RS27240 PF01614 Bacterial transcriptional regulator SMD44_RS27240 PF09339 IclR helix-turn-helix domain SMD44_RS27250 PF02447 GntP family permease SMD44_RS27300 PF00082 Subtilase family SMD44_RS27320 PF00246 Zinc carboxypeptidase SMD44_RS27330 PF02018 Carbohydrate binding domain SMD44_RS27330 PF00041 Fibronectin type III domain SMD44_RS27330 PF00704 Glycosyl hydrolases family 18 SMD44_RS27345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SMD44_RS27355 PF00437 Type II/IV secretion system protein SMD44_RS27390 PF00691 OmpA family SMD44_RS27410 PF01638 HxlR-like helix-turn-helix SMD44_RS27415 PF00248 Aldo/keto reductase family SMD44_RS27420 PF01255 Putative undecaprenyl diphosphate synthase SMD44_RS27425 PF13638 PIN domain SMD44_RS27425 PF02562 PhoH-like protein SMD44_RS27435 PF01594 AI-2E family transporter SMD44_RS27440 PF02627 Carboxymuconolactone decarboxylase family SMD44_RS27445 PF00578 AhpC/TSA family SMD44_RS27450 PF03466 LysR substrate binding domain SMD44_RS27450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS27460 PF00005 ABC transporter SMD44_RS27470 PF00912 Transglycosylase SMD44_RS27470 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS27475 PF06628 Catalase-related immune-responsive SMD44_RS27475 PF00199 Catalase SMD44_RS27495 PF10415 Fumarase C C-terminus SMD44_RS27495 PF00206 Lyase SMD44_RS27515 PF02467 Transcription factor WhiB SMD44_RS27520 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded SMD44_RS27530 PF00881 Nitroreductase family SMD44_RS27535 PF02609 Exonuclease VII small subunit SMD44_RS27540 PF13742 OB-fold nucleic acid binding domain SMD44_RS27540 PF02601 Exonuclease VII, large subunit SMD44_RS27550 PF02401 LytB protein SMD44_RS27555 PF00480 ROK family SMD44_RS27565 PF06071 Protein of unknown function (DUF933) SMD44_RS27565 PF01926 50S ribosome-binding GTPase SMD44_RS27570 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SMD44_RS27575 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SMD44_RS27600 PF01047 MarR family SMD44_RS27605 PF05922 Peptidase inhibitor I9 SMD44_RS27605 PF00082 Subtilase family SMD44_RS27615 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS27615 PF00155 Aminotransferase class I and II SMD44_RS27630 PF00293 NUDIX domain SMD44_RS27645 PF04536 TPM domain SMD44_RS27655 PF13085 2Fe-2S iron-sulfur cluster binding domain SMD44_RS27655 PF13183 4Fe-4S dicluster domain SMD44_RS27660 PF00890 FAD binding domain SMD44_RS27660 PF02910 Fumarate reductase flavoprotein C-term SMD44_RS27680 PF00009 Elongation factor Tu GTP binding domain SMD44_RS27680 PF00679 Elongation factor G C-terminus SMD44_RS27680 PF03144 Elongation factor Tu domain 2 SMD44_RS27680 PF14492 Elongation Factor G, domain II SMD44_RS27690 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS27695 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS27695 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS27700 PF00005 ABC transporter SMD44_RS27700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS27705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS27705 PF00005 ABC transporter SMD44_RS27720 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS27725 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS27725 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS27730 PF00005 ABC transporter SMD44_RS27730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS27735 PF00005 ABC transporter SMD44_RS27735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS27740 PF00326 Prolyl oligopeptidase family SMD44_RS27740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region SMD44_RS27750 PF02585 GlcNAc-PI de-N-acetylase SMD44_RS27765 PF00005 ABC transporter SMD44_RS27775 PF07730 Histidine kinase SMD44_RS27775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS27780 PF00072 Response regulator receiver domain SMD44_RS27780 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS27800 PF00037 4Fe-4S binding domain SMD44_RS27805 PF00155 Aminotransferase class I and II SMD44_RS27820 PF01546 Peptidase family M20/M25/M40 SMD44_RS27820 PF07687 Peptidase dimerisation domain SMD44_RS27825 PF03641 Possible lysine decarboxylase SMD44_RS27830 PF00809 Pterin binding enzyme SMD44_RS27840 PF03352 Methyladenine glycosylase SMD44_RS27845 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS27855 PF01596 O-methyltransferase SMD44_RS27860 PF08281 Sigma-70, region 4 SMD44_RS27860 PF04542 Sigma-70 region 2 SMD44_RS27870 PF13180 PDZ domain SMD44_RS27875 PF02416 mttA/Hcf106 family SMD44_RS27885 PF10609 NUBPL iron-transfer P-loop NTPase SMD44_RS27885 PF01883 Iron-sulfur cluster assembly protein SMD44_RS27910 PF01544 CorA-like Mg2+ transporter protein SMD44_RS27935 PF01914 MarC family integral membrane protein SMD44_RS27945 PF01936 NYN domain SMD44_RS27950 PF00561 alpha/beta hydrolase fold SMD44_RS27955 PF00270 DEAD/DEAH box helicase SMD44_RS27955 PF00271 Helicase conserved C-terminal domain SMD44_RS27995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS28000 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS28000 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS28005 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS28010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS28010 PF00005 ABC transporter SMD44_RS28035 PF00581 Rhodanese-like domain SMD44_RS28035 PF00899 ThiF family SMD44_RS28040 PF00561 alpha/beta hydrolase fold SMD44_RS28045 PF00561 alpha/beta hydrolase fold SMD44_RS28065 PF13361 UvrD-like helicase C-terminal domain SMD44_RS28065 PF00580 UvrD/REP helicase N-terminal domain SMD44_RS28065 PF13361 UvrD-like helicase C-terminal domain SMD44_RS28065 PF00580 UvrD/REP helicase N-terminal domain SMD44_RS28075 PF13361 UvrD-like helicase C-terminal domain SMD44_RS28075 PF00580 UvrD/REP helicase N-terminal domain SMD44_RS28080 PF01546 Peptidase family M20/M25/M40 SMD44_RS28080 PF07687 Peptidase dimerisation domain SMD44_RS28090 PF00462 Glutaredoxin SMD44_RS28095 PF00580 UvrD/REP helicase N-terminal domain SMD44_RS28095 PF00570 HRDC domain SMD44_RS28095 PF13361 UvrD-like helicase C-terminal domain SMD44_RS28105 PF02467 Transcription factor WhiB SMD44_RS28125 PF03109 ABC1 family SMD44_RS28170 PF02391 MoaE protein SMD44_RS28180 PF13180 PDZ domain SMD44_RS28180 PF05362 Lon protease (S16) C-terminal proteolytic domain SMD44_RS28190 PF03699 Uncharacterised protein family (UPF0182) SMD44_RS28215 PF00199 Catalase SMD44_RS28215 PF06628 Catalase-related immune-responsive SMD44_RS28225 PF00459 Inositol monophosphatase family SMD44_RS28235 PF00893 Small Multidrug Resistance protein SMD44_RS28240 PF03193 RsgA GTPase SMD44_RS28245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMD44_RS28255 PF02586 SOS response associated peptidase (SRAP) SMD44_RS28265 PF04542 Sigma-70 region 2 SMD44_RS28265 PF08281 Sigma-70, region 4 SMD44_RS28270 PF13490 Putative zinc-finger SMD44_RS28275 PF01966 HD domain SMD44_RS28280 PF00072 Response regulator receiver domain SMD44_RS28290 PF01327 Polypeptide deformylase SMD44_RS28300 PF00067 Cytochrome P450 SMD44_RS28305 PF01965 DJ-1/PfpI family SMD44_RS28315 PF00268 Ribonucleotide reductase, small chain SMD44_RS28320 PF00317 Ribonucleotide reductase, all-alpha domain SMD44_RS28320 PF02867 Ribonucleotide reductase, barrel domain SMD44_RS28320 PF03477 ATP cone domain SMD44_RS28330 PF00474 Sodium:solute symporter family SMD44_RS28355 PF01547 Bacterial extracellular solute-binding protein SMD44_RS28360 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS28365 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS28370 PF00933 Glycosyl hydrolase family 3 N terminal domain SMD44_RS28370 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMD44_RS28375 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMD44_RS28380 PF01380 SIS domain SMD44_RS28390 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS28395 PF07568 Histidine kinase SMD44_RS28395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS28395 PF12282 Signal transduction histidine kinase SMD44_RS28400 PF02467 Transcription factor WhiB SMD44_RS28405 PF00781 Diacylglycerol kinase catalytic domain SMD44_RS28415 PF04539 Sigma-70 region 3 SMD44_RS28415 PF04542 Sigma-70 region 2 SMD44_RS28415 PF04545 Sigma-70, region 4 SMD44_RS28420 PF13581 Histidine kinase-like ATPase domain SMD44_RS28430 PF00999 Sodium/hydrogen exchanger family SMD44_RS28455 PF00348 Polyprenyl synthetase SMD44_RS28460 PF00583 Acetyltransferase (GNAT) family SMD44_RS28485 PF08281 Sigma-70, region 4 SMD44_RS28485 PF04542 Sigma-70 region 2 SMD44_RS28485 PF12680 SnoaL-like domain SMD44_RS28490 PF00679 Elongation factor G C-terminus SMD44_RS28490 PF00009 Elongation factor Tu GTP binding domain SMD44_RS28490 PF03764 Elongation factor G, domain IV SMD44_RS28495 PF09055 Nickel-containing superoxide dismutase SMD44_RS28510 PF13847 Methyltransferase domain SMD44_RS28515 PF00005 ABC transporter SMD44_RS28520 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS28525 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS28535 PF00390 Malic enzyme, N-terminal domain SMD44_RS28535 PF03949 Malic enzyme, NAD binding domain SMD44_RS28540 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS28540 PF00107 Zinc-binding dehydrogenase SMD44_RS28570 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS28580 PF00398 Ribosomal RNA adenine dimethylase SMD44_RS28590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMD44_RS28590 PF16078 2-oxoglutarate dehydrogenase N-terminus SMD44_RS28590 PF00676 Dehydrogenase E1 component SMD44_RS28590 PF16870 2-oxoglutarate dehydrogenase C-terminal SMD44_RS28590 PF02779 Transketolase, pyrimidine binding domain SMD44_RS28595 PF00672 HAMP domain SMD44_RS28595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS28595 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS28600 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS28600 PF00072 Response regulator receiver domain SMD44_RS28630 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS28630 PF02190 ATP-dependent protease La (LON) substrate-binding domain SMD44_RS28630 PF05362 Lon protease (S16) C-terminal proteolytic domain SMD44_RS28635 PF01183 Glycosyl hydrolases family 25 SMD44_RS28655 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS28655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS28690 PF08361 MAATS-type transcriptional repressor, C-terminal region SMD44_RS28690 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS28695 PF11583 P-aminobenzoate N-oxygenase AurF SMD44_RS28705 PF04978 Protein of unknown function (DUF664) SMD44_RS28710 PF00905 Penicillin binding protein transpeptidase domain SMD44_RS28715 PF01098 Cell cycle protein SMD44_RS28725 PF00672 HAMP domain SMD44_RS28725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS28725 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS28750 PF01068 ATP dependent DNA ligase domain SMD44_RS28750 PF13298 DNA polymerase Ligase (LigD) SMD44_RS28750 PF04679 ATP dependent DNA ligase C terminal region SMD44_RS28755 PF02735 Ku70/Ku80 beta-barrel domain SMD44_RS28760 PF12147 Putative methyltransferase SMD44_RS28760 PF12146 Serine aminopeptidase, S33 SMD44_RS28780 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS28780 PF00072 Response regulator receiver domain SMD44_RS28790 PF03485 Arginyl tRNA synthetase N terminal domain SMD44_RS28790 PF05746 DALR anticodon binding domain SMD44_RS28790 PF00750 tRNA synthetases class I (R) SMD44_RS28795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMD44_RS28795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMD44_RS28800 PF03447 Homoserine dehydrogenase, NAD binding domain SMD44_RS28800 PF00742 Homoserine dehydrogenase SMD44_RS28800 PF01842 ACT domain SMD44_RS28805 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS28810 PF08544 GHMP kinases C terminal SMD44_RS28810 PF00288 GHMP kinases N terminal domain SMD44_RS28815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMD44_RS28815 PF07498 Rho termination factor, N-terminal domain SMD44_RS28815 PF07497 Rho termination factor, RNA-binding domain SMD44_RS28825 PF01197 Ribosomal protein L31 SMD44_RS28830 PF03462 PCRF domain SMD44_RS28830 PF00472 RF-1 domain SMD44_RS28835 PF13649 Methyltransferase domain SMD44_RS28835 PF17827 PrmC N-terminal domain SMD44_RS28840 PF01300 Telomere recombination SMD44_RS28845 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMD44_RS28850 PF00464 Serine hydroxymethyltransferase SMD44_RS28865 PF00119 ATP synthase A chain SMD44_RS28870 PF00137 ATP synthase subunit C SMD44_RS28875 PF00430 ATP synthase B/B' CF(0) SMD44_RS28880 PF00213 ATP synthase delta (OSCP) subunit SMD44_RS28885 PF00306 ATP synthase alpha/beta chain, C terminal domain SMD44_RS28885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMD44_RS28885 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMD44_RS28890 PF00231 ATP synthase SMD44_RS28895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMD44_RS28895 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMD44_RS28900 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SMD44_RS28910 PF00704 Glycosyl hydrolases family 18 SMD44_RS28910 PF00041 Fibronectin type III domain SMD44_RS28910 PF00553 Cellulose binding domain SMD44_RS28915 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS28915 PF00072 Response regulator receiver domain SMD44_RS28920 PF07730 Histidine kinase SMD44_RS28930 PF01923 Cobalamin adenosyltransferase SMD44_RS28940 PF00005 ABC transporter SMD44_RS28940 PF13732 Domain of unknown function (DUF4162) SMD44_RS28945 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS28950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS28950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS28965 PF01939 Endonuclease NucS SMD44_RS28975 PF00296 Luciferase-like monooxygenase SMD44_RS28990 PF00005 ABC transporter SMD44_RS29010 PF00005 ABC transporter SMD44_RS29030 PF02803 Thiolase, C-terminal domain SMD44_RS29030 PF00108 Thiolase, N-terminal domain SMD44_RS29045 PF00072 Response regulator receiver domain SMD44_RS29045 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS29050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS29050 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS29050 PF00672 HAMP domain SMD44_RS29080 PF01910 Thiamine-binding protein SMD44_RS29115 PF00553 Cellulose binding domain SMD44_RS29115 PF01341 Glycosyl hydrolases family 6 SMD44_RS29135 PF12823 Domain of unknown function (DUF3817) SMD44_RS29140 PF01642 Methylmalonyl-CoA mutase SMD44_RS29140 PF02310 B12 binding domain SMD44_RS29155 PF01381 Helix-turn-helix SMD44_RS29170 PF00672 HAMP domain SMD44_RS29170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS29170 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS29175 PF00072 Response regulator receiver domain SMD44_RS29175 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS29180 PF04101 Glycosyltransferase family 28 C-terminal domain SMD44_RS29180 PF03033 Glycosyltransferase family 28 N-terminal domain SMD44_RS29185 PF16363 GDP-mannose 4,6 dehydratase SMD44_RS29190 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS29195 PF00085 Thioredoxin SMD44_RS29220 PF00224 Pyruvate kinase, barrel domain SMD44_RS29220 PF02887 Pyruvate kinase, alpha/beta domain SMD44_RS29225 PF00871 Acetokinase family SMD44_RS29230 PF07085 DRTGG domain SMD44_RS29230 PF01515 Phosphate acetyl/butaryl transferase SMD44_RS29235 PF00365 Phosphofructokinase SMD44_RS29245 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS29250 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS29255 PF01547 Bacterial extracellular solute-binding protein SMD44_RS29260 PF00072 Response regulator receiver domain SMD44_RS29265 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SMD44_RS29265 PF17203 Single cache domain 3 SMD44_RS29265 PF00989 PAS fold SMD44_RS29265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS29270 PF00375 Sodium:dicarboxylate symporter family SMD44_RS29310 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS29315 PF07690 Major Facilitator Superfamily SMD44_RS29325 PF00144 Beta-lactamase SMD44_RS29340 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS29340 PF01434 Peptidase family M41 SMD44_RS29340 PF17862 AAA+ lid domain SMD44_RS29345 PF00069 Protein kinase domain SMD44_RS29350 PF17314 Family of unknown function (DUF5360) SMD44_RS29355 PF00893 Small Multidrug Resistance protein SMD44_RS29365 PF13480 Acetyltransferase (GNAT) domain SMD44_RS29365 PF00155 Aminotransferase class I and II SMD44_RS29375 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS29380 PF03176 MMPL family SMD44_RS29390 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMD44_RS29390 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMD44_RS29390 PF02772 S-adenosylmethionine synthetase, central domain SMD44_RS29395 PF00294 pfkB family carbohydrate kinase SMD44_RS29410 PF00085 Thioredoxin SMD44_RS29420 PF00144 Beta-lactamase SMD44_RS29430 PF02806 Alpha amylase, C-terminal all-beta domain SMD44_RS29430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMD44_RS29430 PF00128 Alpha amylase, catalytic domain SMD44_RS29435 PF01636 Phosphotransferase enzyme family SMD44_RS29435 PF18085 Maltokinase N-terminal cap domain SMD44_RS29440 PF16657 Maltogenic Amylase, C-terminal domain SMD44_RS29440 PF00128 Alpha amylase, catalytic domain SMD44_RS29450 PF05922 Peptidase inhibitor I9 SMD44_RS29450 PF00082 Subtilase family SMD44_RS29465 PF00069 Protein kinase domain SMD44_RS29465 PF13360 PQQ-like domain SMD44_RS29470 PF00069 Protein kinase domain SMD44_RS29470 PF13360 PQQ-like domain SMD44_RS29475 PF00069 Protein kinase domain SMD44_RS29475 PF13360 PQQ-like domain SMD44_RS29480 PF11897 Protein of unknown function (DUF3417) SMD44_RS29480 PF00343 Carbohydrate phosphorylase SMD44_RS29485 PF07504 Fungalysin/Thermolysin Propeptide Motif SMD44_RS29485 PF01483 Proprotein convertase P-domain SMD44_RS29485 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS29485 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS29490 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS29490 PF01483 Proprotein convertase P-domain SMD44_RS29490 PF07504 Fungalysin/Thermolysin Propeptide Motif SMD44_RS29490 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS29505 PF01494 FAD binding domain SMD44_RS29510 PF00664 ABC transporter transmembrane region SMD44_RS29510 PF00005 ABC transporter SMD44_RS29515 PF00005 ABC transporter SMD44_RS29515 PF00664 ABC transporter transmembrane region SMD44_RS29520 PF00005 ABC transporter SMD44_RS29535 PF07730 Histidine kinase SMD44_RS29540 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS29540 PF00072 Response regulator receiver domain SMD44_RS29550 PF03466 LysR substrate binding domain SMD44_RS29550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS29555 PF00128 Alpha amylase, catalytic domain SMD44_RS29555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMD44_RS29560 PF03734 L,D-transpeptidase catalytic domain SMD44_RS29560 PF17964 Bacterial Ig domain SMD44_RS29570 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS29605 PF08502 LeuA allosteric (dimerisation) domain SMD44_RS29605 PF00682 HMGL-like SMD44_RS29610 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS29610 PF07729 FCD domain SMD44_RS29620 PF02540 NAD synthase SMD44_RS29625 PF12833 Helix-turn-helix domain SMD44_RS29625 PF12852 Cupin SMD44_RS29630 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS29630 PF00107 Zinc-binding dehydrogenase SMD44_RS29650 PF03313 Serine dehydratase alpha chain SMD44_RS29650 PF03315 Serine dehydratase beta chain SMD44_RS29655 PF00464 Serine hydroxymethyltransferase SMD44_RS29660 PF01597 Glycine cleavage H-protein SMD44_RS29665 PF01571 Aminomethyltransferase folate-binding domain SMD44_RS29665 PF08669 Glycine cleavage T-protein C-terminal barrel domain SMD44_RS29690 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS29690 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS29695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS29700 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS29705 PF00005 ABC transporter SMD44_RS29705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS29715 PF03458 UPF0126 domain SMD44_RS29725 PF03601 Conserved hypothetical protein 698 SMD44_RS29735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS29735 PF03466 LysR substrate binding domain SMD44_RS29740 PF13280 WYL domain SMD44_RS29740 PF08279 HTH domain SMD44_RS29745 PF00561 alpha/beta hydrolase fold SMD44_RS29750 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS29765 PF00266 Aminotransferase class-V SMD44_RS29780 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS29780 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS29780 PF08990 Erythronolide synthase docking SMD44_RS29780 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS29780 PF00698 Acyl transferase domain SMD44_RS29780 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS29780 PF00550 Phosphopantetheine attachment site SMD44_RS29780 PF08659 KR domain SMD44_RS29780 PF14765 Polyketide synthase dehydratase SMD44_RS29785 PF01965 DJ-1/PfpI family SMD44_RS29800 PF00106 short chain dehydrogenase SMD44_RS29810 PF01653 NAD-dependent DNA ligase adenylation domain SMD44_RS29810 PF03120 NAD-dependent DNA ligase OB-fold domain SMD44_RS29810 PF00533 BRCA1 C Terminus (BRCT) domain SMD44_RS29810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SMD44_RS29810 PF12826 Helix-hairpin-helix motif SMD44_RS29820 PF09594 Glycosyltransferase family 87 SMD44_RS29825 PF02686 Glu-tRNAGln amidotransferase C subunit SMD44_RS29830 PF01425 Amidase SMD44_RS29840 PF02637 GatB domain SMD44_RS29840 PF02934 GatB/GatE catalytic domain SMD44_RS29860 PF13302 Acetyltransferase (GNAT) domain SMD44_RS29875 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS29875 PF00072 Response regulator receiver domain SMD44_RS29885 PF07995 Glucose / Sorbosone dehydrogenase SMD44_RS29890 PF00248 Aldo/keto reductase family SMD44_RS29895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS29900 PF00563 EAL domain SMD44_RS29900 PF00990 Diguanylate cyclase, GGDEF domain SMD44_RS29900 PF03707 Bacterial signalling protein N terminal repeat SMD44_RS29910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS29910 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS29910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS29915 PF10369 Small subunit of acetolactate synthase SMD44_RS29920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SMD44_RS29920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SMD44_RS29925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMD44_RS29925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMD44_RS29925 PF01842 ACT domain SMD44_RS29930 PF07690 Major Facilitator Superfamily SMD44_RS29940 PF01965 DJ-1/PfpI family SMD44_RS29955 PF01619 Proline dehydrogenase SMD44_RS29960 PF00171 Aldehyde dehydrogenase family SMD44_RS29965 PF00561 alpha/beta hydrolase fold SMD44_RS29970 PF01996 F420-0:Gamma-glutamyl ligase SMD44_RS29970 PF00881 Nitroreductase family SMD44_RS29990 PF13673 Acetyltransferase (GNAT) domain SMD44_RS29995 PF00107 Zinc-binding dehydrogenase SMD44_RS29995 PF16884 N-terminal domain of oxidoreductase SMD44_RS30000 PF03466 LysR substrate binding domain SMD44_RS30000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS30010 PF00149 Calcineurin-like phosphoesterase SMD44_RS30010 PF16656 Purple acid Phosphatase, N-terminal domain SMD44_RS30020 PF01063 Amino-transferase class IV SMD44_RS30025 PF18665 Tetracyclin repressor-like, C-terminal domain SMD44_RS30025 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS30040 PF00699 Urease beta subunit SMD44_RS30040 PF00547 Urease, gamma subunit SMD44_RS30045 PF00449 Urease alpha-subunit, N-terminal domain SMD44_RS30045 PF01979 Amidohydrolase family SMD44_RS30050 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMD44_RS30090 PF08502 LeuA allosteric (dimerisation) domain SMD44_RS30090 PF00682 HMGL-like SMD44_RS30115 PF00561 alpha/beta hydrolase fold SMD44_RS30125 PF04264 YceI-like domain SMD44_RS30140 PF01039 Carboxyl transferase domain SMD44_RS30165 PF03259 Roadblock/LC7 domain SMD44_RS30185 PF03259 Roadblock/LC7 domain SMD44_RS30190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS30190 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS30190 PF00989 PAS fold SMD44_RS30190 PF00672 HAMP domain SMD44_RS30200 PF01557 Fumarylacetoacetate (FAA) hydrolase family SMD44_RS30205 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMD44_RS30240 PF01614 Bacterial transcriptional regulator SMD44_RS30240 PF09339 IclR helix-turn-helix domain SMD44_RS30245 PF00330 Aconitase family (aconitate hydratase) SMD44_RS30250 PF00694 Aconitase C-terminal domain SMD44_RS30260 PF00216 Bacterial DNA-binding protein SMD44_RS30270 PF01983 Guanylyl transferase CofC like SMD44_RS30280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMD44_RS30280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMD44_RS30285 PF07478 D-ala D-ala ligase C-terminus SMD44_RS30285 PF01820 D-ala D-ala ligase N-terminus SMD44_RS30300 PF02769 AIR synthase related protein, C-terminal domain SMD44_RS30300 PF00586 AIR synthase related protein, N-terminal domain SMD44_RS30305 PF08543 Phosphomethylpyrimidine kinase SMD44_RS30310 PF01494 FAD binding domain SMD44_RS30315 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS30320 PF00830 Ribosomal L28 family SMD44_RS30325 PF02734 DAK2 domain SMD44_RS30325 PF13684 Dihydroxyacetone kinase family SMD44_RS30330 PF17191 RecG wedge domain SMD44_RS30330 PF00271 Helicase conserved C-terminal domain SMD44_RS30330 PF00270 DEAD/DEAH box helicase SMD44_RS30340 PF01467 Cytidylyltransferase-like SMD44_RS30350 PF02620 Large ribosomal RNA subunit accumulation protein YceD SMD44_RS30355 PF01783 Ribosomal L32p protein family SMD44_RS30360 PF14622 Ribonuclease-III-like SMD44_RS30360 PF00035 Double-stranded RNA binding motif SMD44_RS30365 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMD44_RS30365 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMD44_RS30370 PF01638 HxlR-like helix-turn-helix SMD44_RS30375 PF03358 NADPH-dependent FMN reductase SMD44_RS30380 PF00188 Cysteine-rich secretory protein family SMD44_RS30385 PF00708 Acylphosphatase SMD44_RS30395 PF06470 SMC proteins Flexible Hinge Domain SMD44_RS30395 PF02463 RecF/RecN/SMC N terminal domain SMD44_RS30400 PF00083 Sugar (and other) transporter SMD44_RS30410 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SMD44_RS30415 PF00448 SRP54-type protein, GTPase domain SMD44_RS30415 PF02881 SRP54-type protein, helical bundle domain SMD44_RS30430 PF00909 Ammonium Transporter Family SMD44_RS30435 PF00543 Nitrogen regulatory protein P-II SMD44_RS30445 PF02881 SRP54-type protein, helical bundle domain SMD44_RS30445 PF00448 SRP54-type protein, GTPase domain SMD44_RS30445 PF02978 Signal peptide binding domain SMD44_RS30450 PF01434 Peptidase family M41 SMD44_RS30450 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS30450 PF17862 AAA+ lid domain SMD44_RS30465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS30465 PF03129 Anticodon binding domain SMD44_RS30475 PF00886 Ribosomal protein S16 SMD44_RS30485 PF05239 PRC-barrel domain SMD44_RS30485 PF01782 RimM N-terminal domain SMD44_RS30490 PF01746 tRNA (Guanine-1)-methyltransferase SMD44_RS30495 PF01245 Ribosomal protein L19 SMD44_RS30500 PF10502 Signal peptidase, peptidase S26 SMD44_RS30505 PF10502 Signal peptidase, peptidase S26 SMD44_RS30510 PF10502 Signal peptidase, peptidase S26 SMD44_RS30515 PF10502 Signal peptidase, peptidase S26 SMD44_RS30520 PF00293 NUDIX domain SMD44_RS30525 PF10611 Protein of unknown function (DUF2469) SMD44_RS30530 PF02021 Uncharacterised protein family UPF0102 SMD44_RS30535 PF01078 Magnesium chelatase, subunit ChlI SMD44_RS30535 PF13335 Magnesium chelatase, subunit ChlI C-terminal SMD44_RS30545 PF02481 DNA recombination-mediator protein A SMD44_RS30545 PF17782 DprA winged helix domain SMD44_RS30550 PF04542 Sigma-70 region 2 SMD44_RS30550 PF04545 Sigma-70, region 4 SMD44_RS30550 PF04539 Sigma-70 region 3 SMD44_RS30565 PF00318 Ribosomal protein S2 SMD44_RS30570 PF00889 Elongation factor TS SMD44_RS30575 PF00696 Amino acid kinase family SMD44_RS30580 PF01765 Ribosome recycling factor SMD44_RS30590 PF04055 Radical SAM superfamily SMD44_RS30600 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS30605 PF08402 TOBE domain SMD44_RS30605 PF00005 ABC transporter SMD44_RS30630 PF00005 ABC transporter SMD44_RS30635 PF00202 Aminotransferase class-III SMD44_RS30645 PF00171 Aldehyde dehydrogenase family SMD44_RS30665 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS30675 PF00144 Beta-lactamase SMD44_RS30695 PF03009 Glycerophosphoryl diester phosphodiesterase family SMD44_RS30700 PF00962 Adenosine/AMP deaminase SMD44_RS30710 PF00171 Aldehyde dehydrogenase family SMD44_RS30720 PF08402 TOBE domain SMD44_RS30720 PF00005 ABC transporter SMD44_RS30725 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS30730 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS30735 PF01266 FAD dependent oxidoreductase SMD44_RS30745 PF00041 Fibronectin type III domain SMD44_RS30745 PF00704 Glycosyl hydrolases family 18 SMD44_RS30745 PF02018 Carbohydrate binding domain SMD44_RS30755 PF00202 Aminotransferase class-III SMD44_RS30770 PF17853 GGDEF-like domain SMD44_RS30770 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS30770 PF07905 Purine catabolism regulatory protein-like family SMD44_RS30775 PF00171 Aldehyde dehydrogenase family SMD44_RS30780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS30780 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS30780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS30790 PF17820 PDZ domain SMD44_RS30790 PF02163 Peptidase family M50 SMD44_RS30795 PF04551 GcpE protein SMD44_RS30800 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS30805 PF12708 Pectate lyase superfamily protein SMD44_RS30805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SMD44_RS30805 PF13229 Right handed beta helix region SMD44_RS30825 PF04073 Aminoacyl-tRNA editing domain SMD44_RS30825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMD44_RS30825 PF03129 Anticodon binding domain SMD44_RS30850 PF17384 RimP C-terminal SH3 domain SMD44_RS30850 PF02576 RimP N-terminal domain SMD44_RS30855 PF08529 NusA N-terminal domain SMD44_RS30855 PF13184 NusA-like KH domain SMD44_RS30875 PF02033 Ribosome-binding factor A SMD44_RS30880 PF09142 tRNA Pseudouridine synthase II, C terminal SMD44_RS30880 PF01509 TruB family pseudouridylate synthase (N terminal domain) SMD44_RS30880 PF16198 tRNA pseudouridylate synthase B C-terminal domain SMD44_RS30900 PF06574 FAD synthetase SMD44_RS30900 PF01687 Riboflavin kinase SMD44_RS30905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS30905 PF00005 ABC transporter SMD44_RS30910 PF00005 ABC transporter SMD44_RS30910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMD44_RS30915 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS30915 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS30920 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS30925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS30950 PF05108 Type VII secretion system ESX-1, transport TM domain B SMD44_RS30955 PF00082 Subtilase family SMD44_RS30965 PF06259 Alpha/beta hydrolase SMD44_RS30995 PF00082 Subtilase family SMD44_RS31020 PF01580 FtsK/SpoIIIE family SMD44_RS31030 PF00312 Ribosomal protein S15 SMD44_RS31035 PF00013 KH domain SMD44_RS31035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SMD44_RS31035 PF01138 3' exoribonuclease family, domain 1 SMD44_RS31035 PF00575 S1 RNA binding domain SMD44_RS31040 PF05193 Peptidase M16 inactive domain SMD44_RS31040 PF00675 Insulinase (Peptidase family M16) SMD44_RS31045 PF01113 Dihydrodipicolinate reductase, N-terminus SMD44_RS31045 PF05173 Dihydrodipicolinate reductase, C-terminus SMD44_RS31070 PF12706 Beta-lactamase superfamily domain SMD44_RS31070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMD44_RS31070 PF17770 Ribonuclease J C-terminal domain SMD44_RS31095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SMD44_RS31105 PF00672 HAMP domain SMD44_RS31105 PF07228 Stage II sporulation protein E (SpoIIE) SMD44_RS31115 PF00672 HAMP domain SMD44_RS31115 PF01627 Hpt domain SMD44_RS31115 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS31115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31115 PF00072 Response regulator receiver domain SMD44_RS31115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) SMD44_RS31120 PF00072 Response regulator receiver domain SMD44_RS31125 PF17854 FtsK alpha domain SMD44_RS31125 PF09397 Ftsk gamma domain SMD44_RS31125 PF01580 FtsK/SpoIIIE family SMD44_RS31135 PF18693 TRAM domain SMD44_RS31135 PF00919 Uncharacterized protein family UPF0004 SMD44_RS31135 PF04055 Radical SAM superfamily SMD44_RS31145 PF02464 Competence-damaged protein SMD44_RS31145 PF00994 Probable molybdopterin binding domain SMD44_RS31145 PF18146 Damage-inducible protein CinA KH domain SMD44_RS31155 PF00210 Ferritin-like domain SMD44_RS31170 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMD44_RS31170 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMD44_RS31205 PF01594 AI-2E family transporter SMD44_RS31215 PF01022 Bacterial regulatory protein, arsR family SMD44_RS31220 PF00154 recA bacterial DNA recombination protein SMD44_RS31225 PF02631 RecX family SMD44_RS31240 PF00581 Rhodanese-like domain SMD44_RS31250 PF01494 FAD binding domain SMD44_RS31260 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS31265 PF01464 Transglycosylase SLT domain SMD44_RS31265 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS31270 PF00005 ABC transporter SMD44_RS31275 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS31275 PF00072 Response regulator receiver domain SMD44_RS31280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31280 PF00672 HAMP domain SMD44_RS31280 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS31315 PF03780 Asp23 family, cell envelope-related function SMD44_RS31320 PF04542 Sigma-70 region 2 SMD44_RS31320 PF08281 Sigma-70, region 4 SMD44_RS31340 PF04055 Radical SAM superfamily SMD44_RS31340 PF00919 Uncharacterized protein family UPF0004 SMD44_RS31370 PF01678 Diaminopimelate epimerase SMD44_RS31375 PF02824 TGS domain SMD44_RS31375 PF04607 Region found in RelA / SpoT proteins SMD44_RS31375 PF13291 ACT domain SMD44_RS31385 PF16360 GTP-binding GTPase Middle Region SMD44_RS31385 PF01926 50S ribosome-binding GTPase SMD44_RS31385 PF13167 GTP-binding GTPase N-terminal SMD44_RS31400 PF00202 Aminotransferase class-III SMD44_RS31415 PF04183 IucA / IucC family SMD44_RS31415 PF06276 Ferric iron reductase FhuF-like transporter SMD44_RS31420 PF13307 Helicase C-terminal domain SMD44_RS31425 PF01726 LexA DNA binding domain SMD44_RS31425 PF00717 Peptidase S24-like SMD44_RS31430 PF03477 ATP cone domain SMD44_RS31435 PF08471 Class II vitamin B12-dependent ribonucleotide reductase SMD44_RS31435 PF02867 Ribonucleotide reductase, barrel domain SMD44_RS31445 PF00797 N-acetyltransferase SMD44_RS31460 PF00005 ABC transporter SMD44_RS31465 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS31475 PF07690 Major Facilitator Superfamily SMD44_RS31480 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS31480 PF16859 Tetracyclin repressor-like, C-terminal domain SMD44_RS31485 PF01351 Ribonuclease HII SMD44_RS31500 PF09382 RQC domain SMD44_RS31500 PF16124 RecQ zinc-binding SMD44_RS31500 PF00271 Helicase conserved C-terminal domain SMD44_RS31500 PF00270 DEAD/DEAH box helicase SMD44_RS31500 PF00570 HRDC domain SMD44_RS31520 PF00005 ABC transporter SMD44_RS31525 PF07729 FCD domain SMD44_RS31525 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS31530 PF04545 Sigma-70, region 4 SMD44_RS31530 PF04539 Sigma-70 region 3 SMD44_RS31530 PF04542 Sigma-70 region 2 SMD44_RS31530 PF00140 Sigma-70 factor, region 1.2 SMD44_RS31545 PF00204 DNA gyrase B SMD44_RS31545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31545 PF01751 Toprim domain SMD44_RS31545 PF00986 DNA gyrase B subunit, carboxyl terminus SMD44_RS31555 PF07730 Histidine kinase SMD44_RS31555 PF00672 HAMP domain SMD44_RS31555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31560 PF00072 Response regulator receiver domain SMD44_RS31560 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS31570 PF00474 Sodium:solute symporter family SMD44_RS31575 PF00072 Response regulator receiver domain SMD44_RS31575 PF12431 Transcriptional regulator SMD44_RS31575 PF08279 HTH domain SMD44_RS31580 PF17203 Single cache domain 3 SMD44_RS31580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SMD44_RS31580 PF00989 PAS fold SMD44_RS31595 PF00285 Citrate synthase, C-terminal domain SMD44_RS31610 PF07683 Cobalamin synthesis protein cobW C-terminal domain SMD44_RS31610 PF02492 CobW/HypB/UreG, nucleotide-binding domain SMD44_RS31615 PF00521 DNA gyrase/topoisomerase IV, subunit A SMD44_RS31615 PF03989 DNA gyrase C-terminal domain, beta-propeller SMD44_RS31620 PF05193 Peptidase M16 inactive domain SMD44_RS31620 PF00675 Insulinase (Peptidase family M16) SMD44_RS31630 PF01551 Peptidase family M23 SMD44_RS31635 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS31635 PF07729 FCD domain SMD44_RS31640 PF00381 PTS HPr component phosphorylation site SMD44_RS31650 PF13380 CoA binding domain SMD44_RS31650 PF13607 Succinyl-CoA ligase like flavodoxin domain SMD44_RS31650 PF00583 Acetyltransferase (GNAT) family SMD44_RS31665 PF00265 Thymidine kinase SMD44_RS31675 PF00581 Rhodanese-like domain SMD44_RS31680 PF11268 Protein of unknown function (DUF3071) SMD44_RS31705 PF00459 Inositol monophosphatase family SMD44_RS31710 PF00072 Response regulator receiver domain SMD44_RS31710 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS31715 PF00672 HAMP domain SMD44_RS31715 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS31715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31755 PF03814 Potassium-transporting ATPase A subunit SMD44_RS31765 PF02669 K+-transporting ATPase, c chain SMD44_RS31795 PF03621 MbtH-like protein SMD44_RS31800 PF06902 Divergent 4Fe-4S mono-cluster SMD44_RS31805 PF00067 Cytochrome P450 SMD44_RS31810 PF00067 Cytochrome P450 SMD44_RS31820 PF13732 Domain of unknown function (DUF4162) SMD44_RS31820 PF00005 ABC transporter SMD44_RS31840 PF01613 Flavin reductase like domain SMD44_RS31845 PF00999 Sodium/hydrogen exchanger family SMD44_RS31850 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS31850 PF00501 AMP-binding enzyme SMD44_RS31855 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS31855 PF00501 AMP-binding enzyme SMD44_RS31855 PF00550 Phosphopantetheine attachment site SMD44_RS31860 PF00067 Cytochrome P450 SMD44_RS31865 PF00975 Thioesterase domain SMD44_RS31875 PF00155 Aminotransferase class I and II SMD44_RS31880 PF03301 Tryptophan 2,3-dioxygenase SMD44_RS31890 PF02702 Osmosensitive K+ channel His kinase sensor domain SMD44_RS31890 PF00512 His Kinase A (phospho-acceptor) domain SMD44_RS31890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS31890 PF13493 Domain of unknown function (DUF4118) SMD44_RS31890 PF00582 Universal stress protein family SMD44_RS31895 PF00072 Response regulator receiver domain SMD44_RS31895 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS31910 PF02254 TrkA-N domain SMD44_RS31910 PF02080 TrkA-C domain SMD44_RS31915 PF02080 TrkA-C domain SMD44_RS31915 PF02254 TrkA-N domain SMD44_RS31935 PF13520 Amino acid permease SMD44_RS31940 PF05958 tRNA (Uracil-5-)-methyltransferase SMD44_RS31940 PF01938 TRAM domain SMD44_RS31980 PF00753 Metallo-beta-lactamase superfamily SMD44_RS31985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SMD44_RS31985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SMD44_RS31985 PF01799 [2Fe-2S] binding domain SMD44_RS31990 PF00941 FAD binding domain in molybdopterin dehydrogenase SMD44_RS31990 PF03450 CO dehydrogenase flavoprotein C-terminal domain SMD44_RS32000 PF03459 TOBE domain SMD44_RS32005 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS32005 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS32005 PF00698 Acyl transferase domain SMD44_RS32005 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS32005 PF14765 Polyketide synthase dehydratase SMD44_RS32005 PF00550 Phosphopantetheine attachment site SMD44_RS32005 PF08659 KR domain SMD44_RS32055 PF00005 ABC transporter SMD44_RS32075 PF04472 Cell division protein SepF SMD44_RS32110 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS32110 PF00072 Response regulator receiver domain SMD44_RS32115 PF07730 Histidine kinase SMD44_RS32125 PF02558 Ketopantoate reductase PanE/ApbA SMD44_RS32125 PF08546 Ketopantoate reductase PanE/ApbA C terminal SMD44_RS32135 PF00149 Calcineurin-like phosphoesterase SMD44_RS32145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMD44_RS32145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMD44_RS32155 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS32160 PF01494 FAD binding domain SMD44_RS32170 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS32170 PF00501 AMP-binding enzyme SMD44_RS32175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS32175 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS32175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS32200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMD44_RS32205 PF07969 Amidohydrolase family SMD44_RS32215 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS32220 PF00330 Aconitase family (aconitate hydratase) SMD44_RS32220 PF00694 Aconitase C-terminal domain SMD44_RS32240 PF07690 Major Facilitator Superfamily SMD44_RS32245 PF03130 PBS lyase HEAT-like repeat SMD44_RS32260 PF07971 Glycosyl hydrolase family 92 SMD44_RS32260 PF17678 Glycosyl hydrolase family 92 N-terminal domain SMD44_RS32280 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS32285 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS32290 PF01325 Iron dependent repressor, N-terminal DNA binding domain SMD44_RS32290 PF00480 ROK family SMD44_RS32295 PF13407 Periplasmic binding protein domain SMD44_RS32300 PF00005 ABC transporter SMD44_RS32305 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS32310 PF02780 Transketolase, C-terminal domain SMD44_RS32310 PF02779 Transketolase, pyrimidine binding domain SMD44_RS32310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SMD44_RS32315 PF13520 Amino acid permease SMD44_RS32325 PF09587 Bacterial capsule synthesis protein PGA_cap SMD44_RS32335 PF08245 Mur ligase middle domain SMD44_RS32340 PF14102 Capsule biosynthesis CapC SMD44_RS32360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS32360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS32360 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS32390 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS32390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMD44_RS32400 PF01593 Flavin containing amine oxidoreductase SMD44_RS32405 PF06778 Chlorite dismutase SMD44_RS32415 PF00561 alpha/beta hydrolase fold SMD44_RS32430 PF05114 Protein of unknown function (DUF692) SMD44_RS32480 PF01850 PIN domain SMD44_RS32510 PF08245 Mur ligase middle domain SMD44_RS32510 PF02875 Mur ligase family, glutamate ligase domain SMD44_RS32510 PF01225 Mur ligase family, catalytic domain SMD44_RS32515 PF01641 SelR domain SMD44_RS32530 PF00067 Cytochrome P450 SMD44_RS32555 PF03793 PASTA domain SMD44_RS32555 PF00069 Protein kinase domain SMD44_RS32575 PF00012 Hsp70 protein SMD44_RS32580 PF00012 Hsp70 protein SMD44_RS32585 PF01025 GrpE SMD44_RS32625 PF00117 Glutamine amidotransferase class-I SMD44_RS32625 PF06418 CTP synthase N-terminus SMD44_RS32630 PF03466 LysR substrate binding domain SMD44_RS32630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS32645 PF01810 LysE type translocator SMD44_RS32650 PF00557 Metallopeptidase family M24 SMD44_RS32650 PF01321 Creatinase/Prolidase N-terminal domain SMD44_RS32655 PF00248 Aldo/keto reductase family SMD44_RS32660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMD44_RS32660 PF00128 Alpha amylase, catalytic domain SMD44_RS32670 PF00355 Rieske [2Fe-2S] domain SMD44_RS32670 PF01266 FAD dependent oxidoreductase SMD44_RS32725 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS32730 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS32735 PF01547 Bacterial extracellular solute-binding protein SMD44_RS32750 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase SMD44_RS32760 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS32760 PF00155 Aminotransferase class I and II SMD44_RS32770 PF00082 Subtilase family SMD44_RS32770 PF05922 Peptidase inhibitor I9 SMD44_RS32790 PF02558 Ketopantoate reductase PanE/ApbA SMD44_RS32790 PF08546 Ketopantoate reductase PanE/ApbA C terminal SMD44_RS32805 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS32810 PF00005 ABC transporter SMD44_RS32820 PF00009 Elongation factor Tu GTP binding domain SMD44_RS32825 PF01507 Phosphoadenosine phosphosulfate reductase family SMD44_RS32835 PF01507 Phosphoadenosine phosphosulfate reductase family SMD44_RS32845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SMD44_RS32845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SMD44_RS32860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS32860 PF18158 Adaptive response protein AidB N-terminal domain SMD44_RS32860 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS32880 PF12833 Helix-turn-helix domain SMD44_RS32890 PF00293 NUDIX domain SMD44_RS32905 PF02929 Beta galactosidase small chain SMD44_RS32905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SMD44_RS32905 PF16353 Domain of unknown function(DUF4981) SMD44_RS32905 PF02837 Glycosyl hydrolases family 2, sugar binding domain SMD44_RS32920 PF01048 Phosphorylase superfamily SMD44_RS32930 PF03193 RsgA GTPase SMD44_RS32935 PF06029 AlkA N-terminal domain SMD44_RS32935 PF00730 HhH-GPD superfamily base excision DNA repair protein SMD44_RS32935 PF12833 Helix-turn-helix domain SMD44_RS32935 PF02805 Metal binding domain of Ada SMD44_RS32940 PF07679 Immunoglobulin I-set domain SMD44_RS32940 PF00759 Glycosyl hydrolase family 9 SMD44_RS32940 PF02927 Cellulase N-terminal ig-like domain SMD44_RS32940 PF02018 Carbohydrate binding domain SMD44_RS32980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS32980 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS32980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS33010 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS33010 PF07729 FCD domain SMD44_RS33020 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS33020 PF17853 GGDEF-like domain SMD44_RS33025 PF00941 FAD binding domain in molybdopterin dehydrogenase SMD44_RS33025 PF03450 CO dehydrogenase flavoprotein C-terminal domain SMD44_RS33030 PF01799 [2Fe-2S] binding domain SMD44_RS33030 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS33035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase SMD44_RS33035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SMD44_RS33040 PF00860 Permease family SMD44_RS33050 PF00106 short chain dehydrogenase SMD44_RS33060 PF00067 Cytochrome P450 SMD44_RS33155 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS33225 PF00561 alpha/beta hydrolase fold SMD44_RS33230 PF00072 Response regulator receiver domain SMD44_RS33230 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33235 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS33235 PF08338 Domain of unknown function (DUF1731) SMD44_RS33250 PF00394 Multicopper oxidase SMD44_RS33250 PF07732 Multicopper oxidase SMD44_RS33250 PF07731 Multicopper oxidase SMD44_RS33260 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33260 PF00072 Response regulator receiver domain SMD44_RS33265 PF01544 CorA-like Mg2+ transporter protein SMD44_RS33280 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33280 PF13185 GAF domain SMD44_RS33285 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS33285 PF00501 AMP-binding enzyme SMD44_RS33290 PF00501 AMP-binding enzyme SMD44_RS33290 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS33300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMD44_RS33300 PF00205 Thiamine pyrophosphate enzyme, central domain SMD44_RS33300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMD44_RS33305 PF05977 Transmembrane secretion effector SMD44_RS33325 PF00199 Catalase SMD44_RS33325 PF06628 Catalase-related immune-responsive SMD44_RS33330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS33330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS33335 PF01261 Xylose isomerase-like TIM barrel SMD44_RS33355 PF00576 HIUase/Transthyretin family SMD44_RS33360 PF01014 Uricase SMD44_RS33365 PF00860 Permease family SMD44_RS33370 PF01979 Amidohydrolase family SMD44_RS33375 PF00860 Permease family SMD44_RS33380 PF01374 Glycosyl hydrolase family 46 SMD44_RS33405 PF12791 Anti-sigma factor N-terminus SMD44_RS33405 PF07691 PA14 domain SMD44_RS33420 PF07690 Major Facilitator Superfamily SMD44_RS33430 PF00089 Trypsin SMD44_RS33430 PF02983 Alpha-lytic protease prodomain SMD44_RS33455 PF00248 Aldo/keto reductase family SMD44_RS33470 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS33475 PF08241 Methyltransferase domain SMD44_RS33475 PF13649 Methyltransferase domain SMD44_RS33480 PF01494 FAD binding domain SMD44_RS33490 PF00155 Aminotransferase class I and II SMD44_RS33495 PF01638 HxlR-like helix-turn-helix SMD44_RS33520 PF01274 Malate synthase SMD44_RS33535 PF01614 Bacterial transcriptional regulator SMD44_RS33535 PF09339 IclR helix-turn-helix domain SMD44_RS33540 PF01979 Amidohydrolase family SMD44_RS33545 PF03561 Allantoicase repeat SMD44_RS33560 PF00545 ribonuclease SMD44_RS33585 PF00072 Response regulator receiver domain SMD44_RS33585 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS33600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS33620 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS33625 PF00005 ABC transporter SMD44_RS33630 PF00480 ROK family SMD44_RS33645 PF02423 Ornithine cyclodeaminase/mu-crystallin family SMD44_RS33650 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33675 PF02585 GlcNAc-PI de-N-acetylase SMD44_RS33680 PF00665 Integrase core domain SMD44_RS33680 PF13276 HTH-like domain SMD44_RS33680 PF13333 Integrase core domain SMD44_RS33690 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS33690 PF00175 Oxidoreductase NAD-binding domain SMD44_RS33690 PF00970 Oxidoreductase FAD-binding domain SMD44_RS33695 PF00487 Fatty acid desaturase SMD44_RS33790 PF03780 Asp23 family, cell envelope-related function SMD44_RS33810 PF07730 Histidine kinase SMD44_RS33815 PF00072 Response regulator receiver domain SMD44_RS33815 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS33860 PF00005 ABC transporter SMD44_RS33860 PF00664 ABC transporter transmembrane region SMD44_RS33915 PF00005 ABC transporter SMD44_RS33920 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS33925 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS33930 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS33955 PF00557 Metallopeptidase family M24 SMD44_RS33970 PF07690 Major Facilitator Superfamily SMD44_RS33975 PF07690 Major Facilitator Superfamily SMD44_RS33980 PF07690 Major Facilitator Superfamily SMD44_RS33990 PF00795 Carbon-nitrogen hydrolase SMD44_RS33995 PF00202 Aminotransferase class-III SMD44_RS34000 PF01979 Amidohydrolase family SMD44_RS34010 PF01752 Collagenase SMD44_RS34010 PF08453 Peptidase family M9 N-terminal SMD44_RS34015 PF07729 FCD domain SMD44_RS34015 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS34025 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin SMD44_RS34070 PF00067 Cytochrome P450 SMD44_RS34075 PF00067 Cytochrome P450 SMD44_RS34080 PF04686 Streptomyces sporulation and cell division protein, SsgA SMD44_RS34120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMD44_RS34120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMD44_RS34160 PF02595 Glycerate kinase family SMD44_RS34170 PF02666 Phosphatidylserine decarboxylase SMD44_RS34175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS34175 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS34175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS34185 PF03328 HpcH/HpaI aldolase/citrate lyase family SMD44_RS34190 PF02310 B12 binding domain SMD44_RS34190 PF01642 Methylmalonyl-CoA mutase SMD44_RS34195 PF00107 Zinc-binding dehydrogenase SMD44_RS34195 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS34200 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS34200 PF17754 MftR C-terminal domain SMD44_RS34205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS34205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS34230 PF00561 alpha/beta hydrolase fold SMD44_RS34245 PF07690 Major Facilitator Superfamily SMD44_RS34250 PF13466 STAS domain SMD44_RS34250 PF13581 Histidine kinase-like ATPase domain SMD44_RS34250 PF08448 PAS fold SMD44_RS34250 PF07228 Stage II sporulation protein E (SpoIIE) SMD44_RS34255 PF08241 Methyltransferase domain SMD44_RS34265 PF04371 Porphyromonas-type peptidyl-arginine deiminase SMD44_RS34280 PF07687 Peptidase dimerisation domain SMD44_RS34280 PF01546 Peptidase family M20/M25/M40 SMD44_RS34300 PF13302 Acetyltransferase (GNAT) domain SMD44_RS34330 PF13378 Enolase C-terminal domain-like SMD44_RS34330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SMD44_RS34335 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS34345 PF00741 Gas vesicle protein SMD44_RS34365 PF03364 Polyketide cyclase / dehydrase and lipid transport SMD44_RS34370 PF00741 Gas vesicle protein SMD44_RS34385 PF05121 Gas vesicle protein K SMD44_RS34385 PF00741 Gas vesicle protein SMD44_RS34390 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS34395 PF00781 Diacylglycerol kinase catalytic domain SMD44_RS34400 PF12848 ABC transporter SMD44_RS34400 PF00005 ABC transporter SMD44_RS34405 PF12833 Helix-turn-helix domain SMD44_RS34405 PF14525 AraC-binding-like domain SMD44_RS34410 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain SMD44_RS34485 PF00082 Subtilase family SMD44_RS34485 PF05922 Peptidase inhibitor I9 SMD44_RS34510 PF01329 Pterin 4 alpha carbinolamine dehydratase SMD44_RS34545 PF00248 Aldo/keto reductase family SMD44_RS34555 PF12706 Beta-lactamase superfamily domain SMD44_RS34560 PF03070 TENA/THI-4/PQQC family SMD44_RS34565 PF05402 Coenzyme PQQ synthesis protein D (PqqD) SMD44_RS34570 PF13186 Iron-sulfur cluster-binding domain SMD44_RS34570 PF04055 Radical SAM superfamily SMD44_RS34585 PF07995 Glucose / Sorbosone dehydrogenase SMD44_RS34595 PF00501 AMP-binding enzyme SMD44_RS34600 PF07690 Major Facilitator Superfamily SMD44_RS34610 PF03466 LysR substrate binding domain SMD44_RS34610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS34615 PF13593 SBF-like CPA transporter family (DUF4137) SMD44_RS34625 PF02973 Sialidase, N-terminal domain SMD44_RS34625 PF13088 BNR repeat-like domain SMD44_RS34625 PF04650 YSIRK type signal peptide SMD44_RS34630 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS34630 PF00107 Zinc-binding dehydrogenase SMD44_RS34645 PF02906 Iron only hydrogenase large subunit, C-terminal domain SMD44_RS34645 PF00037 4Fe-4S binding domain SMD44_RS34645 PF02256 Iron hydrogenase small subunit SMD44_RS34645 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SMD44_RS34655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SMD44_RS34655 PF01568 Molydopterin dinucleotide binding domain SMD44_RS34655 PF00384 Molybdopterin oxidoreductase SMD44_RS34660 PF02558 Ketopantoate reductase PanE/ApbA SMD44_RS34660 PF08546 Ketopantoate reductase PanE/ApbA C terminal SMD44_RS34665 PF01494 FAD binding domain SMD44_RS34695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS34695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS34700 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS34700 PF07729 FCD domain SMD44_RS34705 PF00480 ROK family SMD44_RS34710 PF00005 ABC transporter SMD44_RS34715 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS34720 PF13407 Periplasmic binding protein domain SMD44_RS34725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS34725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS34790 PF07690 Major Facilitator Superfamily SMD44_RS34810 PF08442 ATP-grasp domain SMD44_RS34810 PF00549 CoA-ligase SMD44_RS34815 PF00549 CoA-ligase SMD44_RS34815 PF02629 CoA binding domain SMD44_RS34820 PF00171 Aldehyde dehydrogenase family SMD44_RS34825 PF10011 Predicted membrane protein (DUF2254) SMD44_RS34915 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMD44_RS34915 PF00933 Glycosyl hydrolase family 3 N terminal domain SMD44_RS34920 PF00107 Zinc-binding dehydrogenase SMD44_RS34920 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS34925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS34925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS34945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SMD44_RS34970 PF00149 Calcineurin-like phosphoesterase SMD44_RS34980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain SMD44_RS34980 PF13378 Enolase C-terminal domain-like SMD44_RS34985 PF13631 Cytochrome b(N-terminal)/b6/petB SMD44_RS35025 PF05853 beta-keto acid cleavage enzyme SMD44_RS35030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS35030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS35040 PF11975 Family 4 glycosyl hydrolase C-terminal domain SMD44_RS35040 PF02056 Family 4 glycosyl hydrolase SMD44_RS35055 PF00698 Acyl transferase domain SMD44_RS35055 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS35055 PF08990 Erythronolide synthase docking SMD44_RS35055 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS35055 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS35055 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS35055 PF08659 KR domain SMD44_RS35055 PF14765 Polyketide synthase dehydratase SMD44_RS35055 PF00550 Phosphopantetheine attachment site SMD44_RS35060 PF05506 Domain of unknown function (DUF756) SMD44_RS35060 PF04185 Phosphoesterase family SMD44_RS35095 PF03702 Anhydro-N-acetylmuramic acid kinase SMD44_RS35100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS35100 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS35100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS35120 PF17932 Tetracyclin repressor-like, C-terminal domain SMD44_RS35120 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS35125 PF02803 Thiolase, C-terminal domain SMD44_RS35125 PF00108 Thiolase, N-terminal domain SMD44_RS35130 PF00211 Adenylate and Guanylate cyclase catalytic domain SMD44_RS35130 PF13191 AAA ATPase domain SMD44_RS35135 PF03060 Nitronate monooxygenase SMD44_RS35145 PF01144 Coenzyme A transferase SMD44_RS35160 PF00106 short chain dehydrogenase SMD44_RS35175 PF00206 Lyase SMD44_RS35175 PF10397 Adenylosuccinate lyase C-terminus SMD44_RS35180 PF00775 Dioxygenase SMD44_RS35185 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal SMD44_RS35185 PF00775 Dioxygenase SMD44_RS35195 PF01144 Coenzyme A transferase SMD44_RS35200 PF01047 MarR family SMD44_RS35215 PF04679 ATP dependent DNA ligase C terminal region SMD44_RS35215 PF01068 ATP dependent DNA ligase domain SMD44_RS35220 PF01068 ATP dependent DNA ligase domain SMD44_RS35220 PF13298 DNA polymerase Ligase (LigD) SMD44_RS35220 PF04679 ATP dependent DNA ligase C terminal region SMD44_RS35245 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS35260 PF02467 Transcription factor WhiB SMD44_RS35315 PF04493 Endonuclease V SMD44_RS35320 PF03435 Saccharopine dehydrogenase NADP binding domain SMD44_RS35330 PF02515 CoA-transferase family III SMD44_RS35335 PF00296 Luciferase-like monooxygenase SMD44_RS35340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS35340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS35340 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS35345 PF00108 Thiolase, N-terminal domain SMD44_RS35345 PF02803 Thiolase, C-terminal domain SMD44_RS35350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS35350 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS35350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS35355 PF13411 MerR HTH family regulatory protein SMD44_RS35360 PF00501 AMP-binding enzyme SMD44_RS35365 PF00324 Amino acid permease SMD44_RS35375 PF01433 Peptidase family M1 domain SMD44_RS35375 PF11838 ERAP1-like C-terminal domain SMD44_RS35380 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SMD44_RS35380 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SMD44_RS35390 PF02028 BCCT, betaine/carnitine/choline family transporter SMD44_RS35395 PF01266 FAD dependent oxidoreductase SMD44_RS35410 PF12848 ABC transporter SMD44_RS35410 PF00005 ABC transporter SMD44_RS35410 PF16326 ABC transporter C-terminal domain SMD44_RS35500 PF01476 LysM domain SMD44_RS35500 PF00005 ABC transporter SMD44_RS35515 PF01593 Flavin containing amine oxidoreductase SMD44_RS35520 PF00348 Polyprenyl synthetase SMD44_RS35525 PF13243 Squalene-hopene cyclase C-terminal domain SMD44_RS35525 PF13249 Squalene-hopene cyclase N-terminal domain SMD44_RS35535 PF04055 Radical SAM superfamily SMD44_RS35535 PF06463 Molybdenum Cofactor Synthesis C SMD44_RS35540 PF04551 GcpE protein SMD44_RS35545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SMD44_RS35545 PF02779 Transketolase, pyrimidine binding domain SMD44_RS35545 PF02780 Transketolase, C-terminal domain SMD44_RS35550 PF00202 Aminotransferase class-III SMD44_RS35570 PF16874 Glycosyl hydrolase family 36 C-terminal domain SMD44_RS35570 PF16875 Glycosyl hydrolase family 36 N-terminal domain SMD44_RS35575 PF13472 GDSL-like Lipase/Acylhydrolase family SMD44_RS35595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMD44_RS35595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMD44_RS35605 PF12706 Beta-lactamase superfamily domain SMD44_RS35615 PF00293 NUDIX domain SMD44_RS35710 PF11774 Lsr2 SMD44_RS35955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS35955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS35965 PF00155 Aminotransferase class I and II SMD44_RS35970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS35970 PF03466 LysR substrate binding domain SMD44_RS35975 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS35985 PF00005 ABC transporter SMD44_RS36005 PF01752 Collagenase SMD44_RS36005 PF08453 Peptidase family M9 N-terminal SMD44_RS36005 PF18496 Collagenase G catalytic helper subdomain SMD44_RS36010 PF12146 Serine aminopeptidase, S33 SMD44_RS36025 PF02779 Transketolase, pyrimidine binding domain SMD44_RS36030 PF00456 Transketolase, thiamine diphosphate binding domain SMD44_RS36040 PF00975 Thioesterase domain SMD44_RS36040 PF00668 Condensation domain SMD44_RS36040 PF00550 Phosphopantetheine attachment site SMD44_RS36040 PF00501 AMP-binding enzyme SMD44_RS36040 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS36050 PF00800 Prephenate dehydratase SMD44_RS36050 PF01842 ACT domain SMD44_RS36065 PF01063 Amino-transferase class IV SMD44_RS36080 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS36080 PF00931 NB-ARC domain SMD44_RS36080 PF03704 Bacterial transcriptional activator domain SMD44_RS36115 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SMD44_RS36120 PF03621 MbtH-like protein SMD44_RS36125 PF01960 ArgJ family SMD44_RS36130 PF00696 Amino acid kinase family SMD44_RS36135 PF00202 Aminotransferase class-III SMD44_RS36155 PF03176 MMPL family SMD44_RS36170 PF02541 Ppx/GppA phosphatase family SMD44_RS36180 PF00391 PEP-utilising enzyme, mobile domain SMD44_RS36180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SMD44_RS36190 PF00975 Thioesterase domain SMD44_RS36195 PF14765 Polyketide synthase dehydratase SMD44_RS36195 PF00698 Acyl transferase domain SMD44_RS36195 PF00550 Phosphopantetheine attachment site SMD44_RS36195 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36195 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36195 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36195 PF08659 KR domain SMD44_RS36200 PF00501 AMP-binding enzyme SMD44_RS36200 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS36205 PF00155 Aminotransferase class I and II SMD44_RS36205 PF00550 Phosphopantetheine attachment site SMD44_RS36215 PF00550 Phosphopantetheine attachment site SMD44_RS36220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS36220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS36230 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36230 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36250 PF00072 Response regulator receiver domain SMD44_RS36250 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS36260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS36260 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS36260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS36265 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36265 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36265 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36265 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36270 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS36270 PF03704 Bacterial transcriptional activator domain SMD44_RS36290 PF00266 Aminotransferase class-V SMD44_RS36300 PF00924 Mechanosensitive ion channel SMD44_RS36325 PF01047 MarR family SMD44_RS36325 PF00480 ROK family SMD44_RS36330 PF01547 Bacterial extracellular solute-binding protein SMD44_RS36335 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS36340 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS36350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMD44_RS36350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMD44_RS36355 PF00400 WD domain, G-beta repeat SMD44_RS36355 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SMD44_RS36360 PF00188 Cysteine-rich secretory protein family SMD44_RS36385 PF02868 Thermolysin metallopeptidase, alpha-helical domain SMD44_RS36385 PF04389 Peptidase family M28 SMD44_RS36385 PF01447 Thermolysin metallopeptidase, catalytic domain SMD44_RS36400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMD44_RS36400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SMD44_RS36405 PF04324 BFD-like [2Fe-2S] binding domain SMD44_RS36405 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS36410 PF01571 Aminomethyltransferase folate-binding domain SMD44_RS36410 PF08669 Glycine cleavage T-protein C-terminal barrel domain SMD44_RS36410 PF17806 Sarcosine oxidase A3 domain SMD44_RS36410 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS36415 PF00498 FHA domain SMD44_RS36415 PF03704 Bacterial transcriptional activator domain SMD44_RS36415 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS36420 PF00501 AMP-binding enzyme SMD44_RS36420 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS36425 PF11583 P-aminobenzoate N-oxygenase AurF SMD44_RS36430 PF18152 DAHP synthase ferredoxin-like domain SMD44_RS36430 PF00793 DAHP synthetase I family SMD44_RS36455 PF00698 Acyl transferase domain SMD44_RS36455 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36455 PF00550 Phosphopantetheine attachment site SMD44_RS36455 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36455 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36455 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36455 PF14765 Polyketide synthase dehydratase SMD44_RS36455 PF08659 KR domain SMD44_RS36460 PF04715 Anthranilate synthase component I, N terminal region SMD44_RS36460 PF00425 chorismate binding enzyme SMD44_RS36460 PF00117 Glutamine amidotransferase class-I SMD44_RS36470 PF00067 Cytochrome P450 SMD44_RS36485 PF08659 KR domain SMD44_RS36485 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36485 PF00550 Phosphopantetheine attachment site SMD44_RS36485 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36485 PF14765 Polyketide synthase dehydratase SMD44_RS36485 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36485 PF00698 Acyl transferase domain SMD44_RS36500 PF00698 Acyl transferase domain SMD44_RS36500 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36500 PF00550 Phosphopantetheine attachment site SMD44_RS36500 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36500 PF00975 Thioesterase domain SMD44_RS36500 PF08990 Erythronolide synthase docking SMD44_RS36500 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36500 PF18369 Polyketide synthase dimerisation element domain SMD44_RS36500 PF08659 KR domain SMD44_RS36505 PF14765 Polyketide synthase dehydratase SMD44_RS36505 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36505 PF00550 Phosphopantetheine attachment site SMD44_RS36505 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36505 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36505 PF08659 KR domain SMD44_RS36505 PF00698 Acyl transferase domain SMD44_RS36505 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36535 PF00698 Acyl transferase domain SMD44_RS36535 PF14765 Polyketide synthase dehydratase SMD44_RS36535 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36535 PF08659 KR domain SMD44_RS36535 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36535 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36535 PF00550 Phosphopantetheine attachment site SMD44_RS36535 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36565 PF08659 KR domain SMD44_RS36565 PF00975 Thioesterase domain SMD44_RS36565 PF08990 Erythronolide synthase docking SMD44_RS36565 PF18369 Polyketide synthase dimerisation element domain SMD44_RS36565 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36565 PF00550 Phosphopantetheine attachment site SMD44_RS36565 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36565 PF00698 Acyl transferase domain SMD44_RS36565 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36585 PF02571 Precorrin-6x reductase CbiJ/CobK SMD44_RS36615 PF04542 Sigma-70 region 2 SMD44_RS36615 PF08281 Sigma-70, region 4 SMD44_RS36645 PF01425 Amidase SMD44_RS36670 PF00005 ABC transporter SMD44_RS36685 PF00107 Zinc-binding dehydrogenase SMD44_RS36685 PF16884 N-terminal domain of oxidoreductase SMD44_RS36705 PF00005 ABC transporter SMD44_RS36705 PF00664 ABC transporter transmembrane region SMD44_RS36720 PF07690 Major Facilitator Superfamily SMD44_RS36735 PF17837 4'-phosphopantetheinyl transferase N-terminal domain SMD44_RS36735 PF01648 4'-phosphopantetheinyl transferase superfamily SMD44_RS36740 PF00535 Glycosyl transferase family 2 SMD44_RS36750 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS36760 PF01593 Flavin containing amine oxidoreductase SMD44_RS36770 PF00005 ABC transporter SMD44_RS36780 PF00698 Acyl transferase domain SMD44_RS36780 PF08659 KR domain SMD44_RS36780 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36780 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36780 PF14765 Polyketide synthase dehydratase SMD44_RS36780 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36780 PF00550 Phosphopantetheine attachment site SMD44_RS36785 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36785 PF08659 KR domain SMD44_RS36785 PF00698 Acyl transferase domain SMD44_RS36785 PF14765 Polyketide synthase dehydratase SMD44_RS36785 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36785 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36785 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36785 PF08659 KR domain SMD44_RS36785 PF00698 Acyl transferase domain SMD44_RS36785 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36785 PF00550 Phosphopantetheine attachment site SMD44_RS36785 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36785 PF14765 Polyketide synthase dehydratase SMD44_RS36785 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36785 PF00550 Phosphopantetheine attachment site SMD44_RS36785 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36805 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36805 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36805 PF00698 Acyl transferase domain SMD44_RS36805 PF14765 Polyketide synthase dehydratase SMD44_RS36805 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36805 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36805 PF08990 Erythronolide synthase docking SMD44_RS36805 PF00550 Phosphopantetheine attachment site SMD44_RS36805 PF08659 KR domain SMD44_RS36810 PF18369 Polyketide synthase dimerisation element domain SMD44_RS36810 PF00698 Acyl transferase domain SMD44_RS36810 PF08990 Erythronolide synthase docking SMD44_RS36810 PF00550 Phosphopantetheine attachment site SMD44_RS36810 PF08659 KR domain SMD44_RS36810 PF00975 Thioesterase domain SMD44_RS36810 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36810 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36810 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36815 PF00550 Phosphopantetheine attachment site SMD44_RS36815 PF14765 Polyketide synthase dehydratase SMD44_RS36815 PF00698 Acyl transferase domain SMD44_RS36815 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36815 PF08990 Erythronolide synthase docking SMD44_RS36815 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36815 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36815 PF00698 Acyl transferase domain SMD44_RS36815 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36815 PF14765 Polyketide synthase dehydratase SMD44_RS36815 PF00550 Phosphopantetheine attachment site SMD44_RS36815 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36815 PF08659 KR domain SMD44_RS36815 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36815 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36815 PF08990 Erythronolide synthase docking SMD44_RS36815 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36815 PF08659 KR domain SMD44_RS36820 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36820 PF00698 Acyl transferase domain SMD44_RS36820 PF08990 Erythronolide synthase docking SMD44_RS36820 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36820 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36820 PF00550 Phosphopantetheine attachment site SMD44_RS36820 PF08659 KR domain SMD44_RS36820 PF18369 Polyketide synthase dimerisation element domain SMD44_RS36820 PF00975 Thioesterase domain SMD44_RS36850 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36850 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36850 PF00698 Acyl transferase domain SMD44_RS36850 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36850 PF00550 Phosphopantetheine attachment site SMD44_RS36850 PF14765 Polyketide synthase dehydratase SMD44_RS36850 PF08659 KR domain SMD44_RS36850 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36860 PF00550 Phosphopantetheine attachment site SMD44_RS36860 PF08990 Erythronolide synthase docking SMD44_RS36860 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36860 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36860 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36860 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36860 PF14765 Polyketide synthase dehydratase SMD44_RS36860 PF08659 KR domain SMD44_RS36860 PF00698 Acyl transferase domain SMD44_RS36865 PF00975 Thioesterase domain SMD44_RS36865 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36865 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36865 PF08990 Erythronolide synthase docking SMD44_RS36865 PF00698 Acyl transferase domain SMD44_RS36865 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36865 PF08659 KR domain SMD44_RS36865 PF18369 Polyketide synthase dimerisation element domain SMD44_RS36865 PF00550 Phosphopantetheine attachment site SMD44_RS36870 PF14765 Polyketide synthase dehydratase SMD44_RS36870 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36870 PF00698 Acyl transferase domain SMD44_RS36870 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36870 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36870 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36870 PF08659 KR domain SMD44_RS36870 PF00550 Phosphopantetheine attachment site SMD44_RS36870 PF08990 Erythronolide synthase docking SMD44_RS36875 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36875 PF00550 Phosphopantetheine attachment site SMD44_RS36875 PF08659 KR domain SMD44_RS36875 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36875 PF14765 Polyketide synthase dehydratase SMD44_RS36875 PF00698 Acyl transferase domain SMD44_RS36875 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36875 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36885 PF00698 Acyl transferase domain SMD44_RS36885 PF08659 KR domain SMD44_RS36885 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36885 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36885 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36885 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36885 PF00550 Phosphopantetheine attachment site SMD44_RS36885 PF14765 Polyketide synthase dehydratase SMD44_RS36885 PF08990 Erythronolide synthase docking SMD44_RS36890 PF08659 KR domain SMD44_RS36890 PF14765 Polyketide synthase dehydratase SMD44_RS36890 PF00698 Acyl transferase domain SMD44_RS36890 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36890 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36890 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36890 PF00550 Phosphopantetheine attachment site SMD44_RS36895 PF16197 Ketoacyl-synthetase C-terminal extension SMD44_RS36895 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS36895 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS36895 PF08659 KR domain SMD44_RS36895 PF00550 Phosphopantetheine attachment site SMD44_RS36895 PF14765 Polyketide synthase dehydratase SMD44_RS36895 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS36895 PF00698 Acyl transferase domain SMD44_RS36895 PF08990 Erythronolide synthase docking SMD44_RS36905 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS36905 PF00501 AMP-binding enzyme SMD44_RS36915 PF00067 Cytochrome P450 SMD44_RS36925 PF00975 Thioesterase domain SMD44_RS36935 PF07730 Histidine kinase SMD44_RS36940 PF00072 Response regulator receiver domain SMD44_RS36940 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS36945 PF07730 Histidine kinase SMD44_RS36960 PF03176 MMPL family SMD44_RS36995 PF04075 F420H(2)-dependent quinone reductase SMD44_RS37005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS37005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SMD44_RS37030 PF13439 Glycosyltransferase Family 4 SMD44_RS37030 PF00534 Glycosyl transferases group 1 SMD44_RS37035 PF00483 Nucleotidyl transferase SMD44_RS37040 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS37045 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS37050 PF00005 ABC transporter SMD44_RS37055 PF13407 Periplasmic binding protein domain SMD44_RS37060 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS37070 PF07971 Glycosyl hydrolase family 92 SMD44_RS37070 PF17678 Glycosyl hydrolase family 92 N-terminal domain SMD44_RS37075 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain SMD44_RS37075 PF06974 Protein of unknown function (DUF1298) SMD44_RS37080 PF00106 short chain dehydrogenase SMD44_RS37115 PF05175 Methyltransferase small domain SMD44_RS37125 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS37130 PF13416 Bacterial extracellular solute-binding protein SMD44_RS37135 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS37140 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS37155 PF00005 ABC transporter SMD44_RS37155 PF17755 UvrA DNA-binding domain SMD44_RS37155 PF17760 UvrA interaction domain SMD44_RS37180 PF00005 ABC transporter SMD44_RS37185 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS37200 PF00248 Aldo/keto reductase family SMD44_RS37215 PF05656 Protein of unknown function (DUF805) SMD44_RS37225 PF00072 Response regulator receiver domain SMD44_RS37225 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS37230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS37230 PF07730 Histidine kinase SMD44_RS37235 PF00005 ABC transporter SMD44_RS37245 PF02983 Alpha-lytic protease prodomain SMD44_RS37265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMD44_RS37265 PF06827 Zinc finger found in FPG and IleRS SMD44_RS37295 PF13520 Amino acid permease SMD44_RS37300 PF00582 Universal stress protein family SMD44_RS37305 PF01336 OB-fold nucleic acid binding domain SMD44_RS37305 PF09924 Uncharacterised conserved protein (DUF2156) SMD44_RS37305 PF00152 tRNA synthetases class II (D, K and N) SMD44_RS37305 PF16995 Transmembrane region of lysyl-tRNA synthetase SMD44_RS37310 PF01522 Polysaccharide deacetylase SMD44_RS37370 PF00890 FAD binding domain SMD44_RS37370 PF02910 Fumarate reductase flavoprotein C-term SMD44_RS37390 PF00296 Luciferase-like monooxygenase SMD44_RS37400 PF01638 HxlR-like helix-turn-helix SMD44_RS37405 PF01494 FAD binding domain SMD44_RS37420 PF04075 F420H(2)-dependent quinone reductase SMD44_RS37430 PF01757 Acyltransferase family SMD44_RS37435 PF00072 Response regulator receiver domain SMD44_RS37435 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS37465 PF01547 Bacterial extracellular solute-binding protein SMD44_RS37470 PF10017 Histidine-specific methyltransferase, SAM-dependent SMD44_RS37480 PF03781 Sulfatase-modifying factor enzyme 1 SMD44_RS37480 PF12867 DinB superfamily SMD44_RS37485 PF04107 Glutamate-cysteine ligase family 2(GCS2) SMD44_RS37505 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS37510 PF00085 Thioredoxin SMD44_RS37515 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS37515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMD44_RS37520 PF02467 Transcription factor WhiB SMD44_RS37525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SMD44_RS37595 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS37600 PF00005 ABC transporter SMD44_RS37695 PF02311 AraC-like ligand binding domain SMD44_RS37695 PF12833 Helix-turn-helix domain SMD44_RS37700 PF01638 HxlR-like helix-turn-helix SMD44_RS37705 PF00561 alpha/beta hydrolase fold SMD44_RS37755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMD44_RS37765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase SMD44_RS37765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SMD44_RS37770 PF01638 HxlR-like helix-turn-helix SMD44_RS37795 PF04542 Sigma-70 region 2 SMD44_RS37795 PF04539 Sigma-70 region 3 SMD44_RS37795 PF04545 Sigma-70, region 4 SMD44_RS37800 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS37890 PF00571 CBS domain SMD44_RS37900 PF07739 TipAS antibiotic-recognition domain SMD44_RS37900 PF13411 MerR HTH family regulatory protein SMD44_RS37905 PF04978 Protein of unknown function (DUF664) SMD44_RS37910 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS37910 PF00501 AMP-binding enzyme SMD44_RS37985 PF04055 Radical SAM superfamily SMD44_RS38000 PF00092 von Willebrand factor type A domain SMD44_RS38035 PF00561 alpha/beta hydrolase fold SMD44_RS38070 PF00072 Response regulator receiver domain SMD44_RS38070 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS38100 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS38110 PF08329 Chitinase A, N-terminal domain SMD44_RS38110 PF00704 Glycosyl hydrolases family 18 SMD44_RS38120 PF00135 Carboxylesterase family SMD44_RS38135 PF01374 Glycosyl hydrolase family 46 SMD44_RS38185 PF12897 Alanine-glyoxylate amino-transferase SMD44_RS38195 PF08241 Methyltransferase domain SMD44_RS38200 PF02525 Flavodoxin-like fold SMD44_RS38215 PF13229 Right handed beta helix region SMD44_RS38215 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) SMD44_RS38215 PF12708 Pectate lyase superfamily protein SMD44_RS38220 PF00128 Alpha amylase, catalytic domain SMD44_RS38225 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS38230 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS38240 PF00356 Bacterial regulatory proteins, lacI family SMD44_RS38245 PF00005 ABC transporter SMD44_RS38245 PF00664 ABC transporter transmembrane region SMD44_RS38275 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS38295 PF11870 Domain of unknown function (DUF3390) SMD44_RS38295 PF13183 4Fe-4S dicluster domain SMD44_RS38295 PF02589 LUD domain SMD44_RS38305 PF00561 alpha/beta hydrolase fold SMD44_RS38315 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS38330 PF08240 Alcohol dehydrogenase GroES-like domain SMD44_RS38330 PF00107 Zinc-binding dehydrogenase SMD44_RS38345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS38400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SMD44_RS38405 PF00300 Histidine phosphatase superfamily (branch 1) SMD44_RS38465 PF08768 Domain of unknown function (DUF1794) SMD44_RS38510 PF03372 Endonuclease/Exonuclease/phosphatase family SMD44_RS38530 PF04542 Sigma-70 region 2 SMD44_RS38530 PF08281 Sigma-70, region 4 SMD44_RS38530 PF12680 SnoaL-like domain SMD44_RS38565 PF00005 ABC transporter SMD44_RS38565 PF00664 ABC transporter transmembrane region SMD44_RS38575 PF01654 Cytochrome bd terminal oxidase subunit I SMD44_RS38580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS38580 PF03466 LysR substrate binding domain SMD44_RS38585 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS38590 PF14759 Reductase C-terminal SMD44_RS38590 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMD44_RS38595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SMD44_RS38595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SMD44_RS38600 PF01274 Malate synthase SMD44_RS38615 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SMD44_RS38615 PF00400 WD domain, G-beta repeat SMD44_RS38625 PF00551 Formyl transferase SMD44_RS38625 PF02911 Formyl transferase, C-terminal domain SMD44_RS38625 PF01370 NAD dependent epimerase/dehydratase family SMD44_RS38640 PF00005 ABC transporter SMD44_RS38705 PF00664 ABC transporter transmembrane region SMD44_RS38705 PF00005 ABC transporter SMD44_RS38735 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38735 PF00550 Phosphopantetheine attachment site SMD44_RS38735 PF00501 AMP-binding enzyme SMD44_RS38735 PF00668 Condensation domain SMD44_RS38735 PF00550 Phosphopantetheine attachment site SMD44_RS38735 PF00668 Condensation domain SMD44_RS38735 PF00501 AMP-binding enzyme SMD44_RS38735 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38770 PF00202 Aminotransferase class-III SMD44_RS38775 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SMD44_RS38785 PF00535 Glycosyl transferase family 2 SMD44_RS38810 PF00483 Nucleotidyl transferase SMD44_RS38815 PF08484 C-methyltransferase C-terminal domain SMD44_RS38815 PF08421 Putative zinc binding domain SMD44_RS38820 PF00534 Glycosyl transferases group 1 SMD44_RS38820 PF13439 Glycosyltransferase Family 4 SMD44_RS38860 PF00534 Glycosyl transferases group 1 SMD44_RS38860 PF13439 Glycosyltransferase Family 4 SMD44_RS38870 PF02397 Bacterial sugar transferase SMD44_RS38875 PF00668 Condensation domain SMD44_RS38875 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38875 PF00550 Phosphopantetheine attachment site SMD44_RS38875 PF00501 AMP-binding enzyme SMD44_RS38890 PF00550 Phosphopantetheine attachment site SMD44_RS38890 PF00668 Condensation domain SMD44_RS38890 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38890 PF00501 AMP-binding enzyme SMD44_RS38890 PF00975 Thioesterase domain SMD44_RS38895 PF00391 PEP-utilising enzyme, mobile domain SMD44_RS38895 PF08241 Methyltransferase domain SMD44_RS38895 PF00501 AMP-binding enzyme SMD44_RS38895 PF00550 Phosphopantetheine attachment site SMD44_RS38895 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38895 PF00975 Thioesterase domain SMD44_RS38895 PF00668 Condensation domain SMD44_RS38900 PF00668 Condensation domain SMD44_RS38900 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38900 PF00501 AMP-binding enzyme SMD44_RS38900 PF00550 Phosphopantetheine attachment site SMD44_RS38905 PF00550 Phosphopantetheine attachment site SMD44_RS38905 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS38905 PF00501 AMP-binding enzyme SMD44_RS38960 PF00149 Calcineurin-like phosphoesterase SMD44_RS38980 PF01209 ubiE/COQ5 methyltransferase family SMD44_RS38995 PF00586 AIR synthase related protein, N-terminal domain SMD44_RS38995 PF02769 AIR synthase related protein, C-terminal domain SMD44_RS39000 PF01924 Hydrogenase formation hypA family SMD44_RS39050 PF01455 HupF/HypC family SMD44_RS39090 PF04972 BON domain SMD44_RS39090 PF01476 LysM domain SMD44_RS39100 PF00011 Hsp20/alpha crystallin family SMD44_RS39105 PF13185 GAF domain SMD44_RS39105 PF13492 GAF domain SMD44_RS39105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS39105 PF07730 Histidine kinase SMD44_RS39115 PF00582 Universal stress protein family SMD44_RS39135 PF13492 GAF domain SMD44_RS39135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS39135 PF07730 Histidine kinase SMD44_RS39135 PF13185 GAF domain SMD44_RS39170 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS39185 PF00582 Universal stress protein family SMD44_RS39210 PF00400 WD domain, G-beta repeat SMD44_RS39210 PF12894 Anaphase-promoting complex subunit 4 WD40 domain SMD44_RS39230 PF00128 Alpha amylase, catalytic domain SMD44_RS39230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMD44_RS39235 PF01228 Glycine radical SMD44_RS39235 PF02901 Pyruvate formate lyase-like SMD44_RS39240 PF04055 Radical SAM superfamily SMD44_RS39245 PF00171 Aldehyde dehydrogenase family SMD44_RS39245 PF00465 Iron-containing alcohol dehydrogenase SMD44_RS39255 PF00582 Universal stress protein family SMD44_RS39265 PF00171 Aldehyde dehydrogenase family SMD44_RS39275 PF01510 N-acetylmuramoyl-L-alanine amidase SMD44_RS39280 PF00480 ROK family SMD44_RS39280 PF01047 MarR family SMD44_RS39310 PF00176 SNF2 family N-terminal domain SMD44_RS39310 PF00271 Helicase conserved C-terminal domain SMD44_RS39310 PF12419 SNF2 Helicase protein SMD44_RS39355 PF08241 Methyltransferase domain SMD44_RS39390 PF03259 Roadblock/LC7 domain SMD44_RS39410 PF00271 Helicase conserved C-terminal domain SMD44_RS39410 PF08148 DSHCT (NUC185) domain SMD44_RS39410 PF00270 DEAD/DEAH box helicase SMD44_RS39430 PF00375 Sodium:dicarboxylate symporter family SMD44_RS39435 PF00180 Isocitrate/isopropylmalate dehydrogenase SMD44_RS39440 PF03466 LysR substrate binding domain SMD44_RS39440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMD44_RS39475 PF01047 MarR family SMD44_RS39505 PF07690 Major Facilitator Superfamily SMD44_RS39530 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS39585 PF16363 GDP-mannose 4,6 dehydratase SMD44_RS39590 PF00483 Nucleotidyl transferase SMD44_RS39595 PF06722 Protein of unknown function (DUF1205) SMD44_RS39600 PF00069 Protein kinase domain SMD44_RS39630 PF00501 AMP-binding enzyme SMD44_RS39635 PF00664 ABC transporter transmembrane region SMD44_RS39635 PF00005 ABC transporter SMD44_RS39640 PF00221 Aromatic amino acid lyase SMD44_RS39645 PF00501 AMP-binding enzyme SMD44_RS39645 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39650 PF00550 Phosphopantetheine attachment site SMD44_RS39665 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SMD44_RS39670 PF03559 NDP-hexose 2,3-dehydratase SMD44_RS39675 PF03559 NDP-hexose 2,3-dehydratase SMD44_RS39725 PF04389 Peptidase family M28 SMD44_RS39725 PF04151 Bacterial pre-peptidase C-terminal domain SMD44_RS39745 PF00550 Phosphopantetheine attachment site SMD44_RS39745 PF00668 Condensation domain SMD44_RS39745 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39745 PF00501 AMP-binding enzyme SMD44_RS39750 PF00975 Thioesterase domain SMD44_RS39750 PF00550 Phosphopantetheine attachment site SMD44_RS39750 PF00668 Condensation domain SMD44_RS39750 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39750 PF00501 AMP-binding enzyme SMD44_RS39765 PF00202 Aminotransferase class-III SMD44_RS39795 PF00975 Thioesterase domain SMD44_RS39795 PF00550 Phosphopantetheine attachment site SMD44_RS39795 PF00668 Condensation domain SMD44_RS39795 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39795 PF00501 AMP-binding enzyme SMD44_RS39800 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39800 PF00501 AMP-binding enzyme SMD44_RS39800 PF00668 Condensation domain SMD44_RS39800 PF00550 Phosphopantetheine attachment site SMD44_RS39800 PF00975 Thioesterase domain SMD44_RS39805 PF00975 Thioesterase domain SMD44_RS39805 PF00668 Condensation domain SMD44_RS39805 PF00550 Phosphopantetheine attachment site SMD44_RS39805 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39805 PF00501 AMP-binding enzyme SMD44_RS39810 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39810 PF00550 Phosphopantetheine attachment site SMD44_RS39810 PF00668 Condensation domain SMD44_RS39810 PF00501 AMP-binding enzyme SMD44_RS39810 PF00975 Thioesterase domain SMD44_RS39815 PF00501 AMP-binding enzyme SMD44_RS39815 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS39815 PF00668 Condensation domain SMD44_RS39815 PF00550 Phosphopantetheine attachment site SMD44_RS39815 PF00975 Thioesterase domain SMD44_RS39835 PF00111 2Fe-2S iron-sulfur cluster binding domain SMD44_RS39835 PF01799 [2Fe-2S] binding domain SMD44_RS39835 PF10518 TAT (twin-arginine translocation) pathway signal sequence SMD44_RS39850 PF02625 XdhC and CoxI family SMD44_RS39850 PF13478 XdhC Rossmann domain SMD44_RS39860 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SMD44_RS39860 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SMD44_RS39860 PF02278 Polysaccharide lyase family 8, super-sandwich domain SMD44_RS39905 PF00296 Luciferase-like monooxygenase SMD44_RS39925 PF01494 FAD binding domain SMD44_RS39930 PF02909 Tetracyclin repressor-like, C-terminal domain SMD44_RS39930 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS39960 PF00814 Glycoprotease family SMD44_RS39970 PF02272 DHHA1 domain SMD44_RS39970 PF01411 tRNA synthetases class II (A) SMD44_RS39970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMD44_RS39985 PF00378 Enoyl-CoA hydratase/isomerase SMD44_RS40005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS40010 PF00069 Protein kinase domain SMD44_RS40010 PF03793 PASTA domain SMD44_RS40070 PF02574 Homocysteine S-methyltransferase SMD44_RS40080 PF12911 N-terminal TM domain of oligopeptide transport permease C SMD44_RS40080 PF00528 Binding-protein-dependent transport system inner membrane component SMD44_RS40090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMD44_RS40095 PF00480 ROK family SMD44_RS40100 PF07364 Metallopeptidase family M81 SMD44_RS40100 PF07171 MlrC C-terminus SMD44_RS40105 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMD44_RS40155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMD44_RS40160 PF01022 Bacterial regulatory protein, arsR family SMD44_RS40210 PF00072 Response regulator receiver domain SMD44_RS40210 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS40220 PF16655 PhoD-like phosphatase, N-terminal domain SMD44_RS40220 PF09423 PhoD-like phosphatase SMD44_RS40240 PF00574 Clp protease SMD44_RS40245 PF00574 Clp protease SMD44_RS40300 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS40300 PF07702 UTRA domain SMD44_RS40320 PF01545 Cation efflux family SMD44_RS40320 PF16916 Dimerisation domain of Zinc Transporter SMD44_RS40385 PF00392 Bacterial regulatory proteins, gntR family SMD44_RS40385 PF07729 FCD domain SMD44_RS40400 PF02653 Branched-chain amino acid transport system / permease component SMD44_RS40405 PF00005 ABC transporter SMD44_RS40410 PF13407 Periplasmic binding protein domain SMD44_RS40430 PF01614 Bacterial transcriptional regulator SMD44_RS40430 PF09339 IclR helix-turn-helix domain SMD44_RS40440 PF07690 Major Facilitator Superfamily SMD44_RS40450 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS40485 PF00775 Dioxygenase SMD44_RS40485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal SMD44_RS40490 PF00296 Luciferase-like monooxygenase SMD44_RS40560 PF04542 Sigma-70 region 2 SMD44_RS40560 PF04539 Sigma-70 region 3 SMD44_RS40560 PF04545 Sigma-70, region 4 SMD44_RS40700 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS40735 PF00933 Glycosyl hydrolase family 3 N terminal domain SMD44_RS40735 PF01915 Glycosyl hydrolase family 3 C-terminal domain SMD44_RS40760 PF00293 NUDIX domain SMD44_RS40775 PF00459 Inositol monophosphatase family SMD44_RS40850 PF00005 ABC transporter SMD44_RS40935 PF00348 Polyprenyl synthetase SMD44_RS40955 PF01032 FecCD transport family SMD44_RS40960 PF00106 short chain dehydrogenase SMD44_RS40965 PF00425 chorismate binding enzyme SMD44_RS40975 PF00550 Phosphopantetheine attachment site SMD44_RS40975 PF00857 Isochorismatase family SMD44_RS40980 PF00857 Isochorismatase family SMD44_RS40980 PF00550 Phosphopantetheine attachment site SMD44_RS41010 PF01063 Amino-transferase class IV SMD44_RS41020 PF02615 Malate/L-lactate dehydrogenase SMD44_RS41025 PF11583 P-aminobenzoate N-oxygenase AurF SMD44_RS41055 PF02333 Phytase SMD44_RS41060 PF02983 Alpha-lytic protease prodomain SMD44_RS41070 PF06724 Domain of Unknown Function (DUF1206) SMD44_RS41110 PF04542 Sigma-70 region 2 SMD44_RS41110 PF12680 SnoaL-like domain SMD44_RS41110 PF08281 Sigma-70, region 4 SMD44_RS41160 PF12833 Helix-turn-helix domain SMD44_RS41160 PF01965 DJ-1/PfpI family SMD44_RS41175 PF00550 Phosphopantetheine attachment site SMD44_RS41190 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS41190 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS41195 PF02801 Beta-ketoacyl synthase, C-terminal domain SMD44_RS41195 PF00109 Beta-ketoacyl synthase, N-terminal domain SMD44_RS41205 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS41205 PF00501 AMP-binding enzyme SMD44_RS41210 PF00550 Phosphopantetheine attachment site SMD44_RS41220 PF07690 Major Facilitator Superfamily SMD44_RS41225 PF00501 AMP-binding enzyme SMD44_RS41225 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS41230 PF01494 FAD binding domain SMD44_RS41250 PF01300 Telomere recombination SMD44_RS41365 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS41365 PF00072 Response regulator receiver domain SMD44_RS41405 PF05698 Bacterial trigger factor protein (TF) C-terminus SMD44_RS41455 PF00069 Protein kinase domain SMD44_RS41480 PF04055 Radical SAM superfamily SMD44_RS41480 PF06463 Molybdenum Cofactor Synthesis C SMD44_RS41485 PF07730 Histidine kinase SMD44_RS41485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS41510 PF00571 CBS domain SMD44_RS41510 PF00478 IMP dehydrogenase / GMP reductase domain SMD44_RS41515 PF00156 Phosphoribosyl transferase domain SMD44_RS41580 PF02665 Nitrate reductase gamma subunit SMD44_RS41580 PF02613 Nitrate reductase delta subunit SMD44_RS41580 PF00384 Molybdopterin oxidoreductase SMD44_RS41585 PF02665 Nitrate reductase gamma subunit SMD44_RS41585 PF00384 Molybdopterin oxidoreductase SMD44_RS41585 PF02613 Nitrate reductase delta subunit SMD44_RS41680 PF00664 ABC transporter transmembrane region SMD44_RS41680 PF00005 ABC transporter SMD44_RS41690 PF00005 ABC transporter SMD44_RS41690 PF00664 ABC transporter transmembrane region SMD44_RS41700 PF00196 Bacterial regulatory proteins, luxR family SMD44_RS41710 PF00004 ATPase family associated with various cellular activities (AAA) SMD44_RS41710 PF07724 AAA domain (Cdc48 subfamily) SMD44_RS41710 PF17871 AAA lid domain SMD44_RS41710 PF02861 Clp amino terminal domain, pathogenicity island component SMD44_RS41710 PF10431 C-terminal, D2-small domain, of ClpB protein SMD44_RS41730 PF08443 RimK-like ATP-grasp domain SMD44_RS41730 PF18030 RimK PreATP-grasp domain SMD44_RS41745 PF02469 Fasciclin domain SMD44_RS41765 PF02469 Fasciclin domain SMD44_RS41770 PF00440 Bacterial regulatory proteins, tetR family SMD44_RS41770 PF16859 Tetracyclin repressor-like, C-terminal domain SMD44_RS41780 PF03741 Integral membrane protein TerC family SMD44_RS41795 PF00291 Pyridoxal-phosphate dependent enzyme SMD44_RS41835 PF00005 ABC transporter SMD44_RS41860 PF13411 MerR HTH family regulatory protein SMD44_RS41860 PF07739 TipAS antibiotic-recognition domain SMD44_RS41870 PF12697 Alpha/beta hydrolase family SMD44_RS41880 PF00487 Fatty acid desaturase SMD44_RS41890 PF13556 PucR C-terminal helix-turn-helix domain SMD44_RS41890 PF17853 GGDEF-like domain SMD44_RS41905 PF00069 Protein kinase domain SMD44_RS41915 PF00005 ABC transporter SMD44_RS41915 PF00664 ABC transporter transmembrane region SMD44_RS41920 PF00005 ABC transporter SMD44_RS41920 PF00664 ABC transporter transmembrane region SMD44_RS41935 PF00704 Glycosyl hydrolases family 18 SMD44_RS41935 PF00041 Fibronectin type III domain SMD44_RS41935 PF02018 Carbohydrate binding domain SMD44_RS41995 PF00561 alpha/beta hydrolase fold SMD44_RS42000 PF00561 alpha/beta hydrolase fold SMD44_RS42015 PF00486 Transcriptional regulatory protein, C terminal SMD44_RS42015 PF00072 Response regulator receiver domain SMD44_RS42065 PF00561 alpha/beta hydrolase fold SMD44_RS42065 PF00106 short chain dehydrogenase SMD44_RS42115 PF00011 Hsp20/alpha crystallin family SMD44_RS42125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMD44_RS42125 PF00183 Hsp90 protein SMD44_RS42140 PF00067 Cytochrome P450 SMD44_RS42145 PF00144 Beta-lactamase SMD44_RS42160 PF00501 AMP-binding enzyme SMD44_RS42160 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42160 PF00668 Condensation domain SMD44_RS42160 PF00550 Phosphopantetheine attachment site SMD44_RS42160 PF00975 Thioesterase domain SMD44_RS42165 PF00501 AMP-binding enzyme SMD44_RS42165 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42165 PF00668 Condensation domain SMD44_RS42165 PF00550 Phosphopantetheine attachment site SMD44_RS42170 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42170 PF00550 Phosphopantetheine attachment site SMD44_RS42170 PF00668 Condensation domain SMD44_RS42170 PF00501 AMP-binding enzyme SMD44_RS42175 PF00550 Phosphopantetheine attachment site SMD44_RS42175 PF00668 Condensation domain SMD44_RS42175 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42175 PF00501 AMP-binding enzyme SMD44_RS42175 PF00975 Thioesterase domain SMD44_RS42180 PF00501 AMP-binding enzyme SMD44_RS42180 PF00668 Condensation domain SMD44_RS42180 PF00550 Phosphopantetheine attachment site SMD44_RS42180 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42190 PF00501 AMP-binding enzyme SMD44_RS42190 PF00550 Phosphopantetheine attachment site SMD44_RS42190 PF13193 AMP-binding enzyme C-terminal domain SMD44_RS42190 PF00668 Condensation domain SMD44_RS42330 PF03120 NAD-dependent DNA ligase OB-fold domain SMD44_RS42330 PF01653 NAD-dependent DNA ligase adenylation domain SMD44_RS42330 PF12826 Helix-hairpin-helix motif SMD44_RS42330 PF00533 BRCA1 C Terminus (BRCT) domain SMD44_RS42350 PF00216 Bacterial DNA-binding protein SMD44_RS42360 PF02467 Transcription factor WhiB SMD44_RS42390 PF00075 RNase H SMD44_RS42430 PF00216 Bacterial DNA-binding protein SMD44_RS42445 PF00534 Glycosyl transferases group 1 SMD44_RS42445 PF13439 Glycosyltransferase Family 4 SMD44_RS42505 PF02378 Phosphotransferase system, EIIC SMD44_RS42515 PF00691 OmpA family SMD44_RS42515 PF13677 Membrane MotB of proton-channel complex MotA/MotB SMD44_RS42530 PF00155 Aminotransferase class I and II SMD44_RS42545 PF02844 Phosphoribosylglycinamide synthetase, N domain SMD44_RS42545 PF02843 Phosphoribosylglycinamide synthetase, C domain SMD44_RS42545 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMD44_RS42610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMD44_RS42610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMD44_RS42620 PF00069 Protein kinase domain SMD44_RS42620 PF03793 PASTA domain SMD44_RS42680 PF00005 ABC transporter SMD44_RS42680 PF00664 ABC transporter transmembrane region SMD44_RS42690 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase SMD44_RS42695 PF00293 NUDIX domain SMD44_RS42710 PF01323 DSBA-like thioredoxin domain SMD44_RS42715 PF00929 Exonuclease SMD44_RS42715 PF11490 DNA polymerase III polC-type N-terminus II SMD44_RS42715 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMD44_RS42715 PF01336 OB-fold nucleic acid binding domain SMD44_RS42715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMD44_RS42715 PF14579 Helix-hairpin-helix motif SMD44_RS42715 PF02811 PHP domain SMD44_RS42715 PF14480 DNA polymerase III polC-type N-terminus I SMD44_RS42725 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS42735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SMD44_RS42740 PF06463 Molybdenum Cofactor Synthesis C SMD44_RS42740 PF04055 Radical SAM superfamily SMD44_RS42745 PF02223 Thymidylate kinase SMD44_RS42755 PF00156 Phosphoribosyl transferase domain SMD44_RS42760 PF01227 GTP cyclohydrolase I SMD44_RS42765 PF04055 Radical SAM superfamily SMD44_RS42780 PF01820 D-ala D-ala ligase N-terminus SMD44_RS42780 PF07478 D-ala D-ala ligase C-terminus SMD44_RS42820 PF00723 Glycosyl hydrolases family 15 SMD44_RS42825 PF13419 Haloacid dehalogenase-like hydrolase SMD44_RS42830 PF00067 Cytochrome P450 SMD44_RS42835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SMD44_RS42835 PF02770 Acyl-CoA dehydrogenase, middle domain SMD44_RS42835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SMD44_RS42870 PF00248 Aldo/keto reductase family SMD44_RS42875 PF01872 RibD C-terminal domain SMD44_RS42875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMD44_RS42955 PF00561 alpha/beta hydrolase fold SMD44_RS42985 PF02195 ParB-like nuclease domain SMD44_RS42990 PF11922 Domain of unknown function (DUF3440) SMD44_RS42990 PF01507 Phosphoadenosine phosphosulfate reductase family SMD44_RS43195 PF12697 Alpha/beta hydrolase family SMD44_RS43195 PF08241 Methyltransferase domain SMD44_RS43390 PF01551 Peptidase family M23 SMD44_RS43390 PF01464 Transglycosylase SLT domain SMD44_RS43390 PF10145 Phage-related minor tail protein SMD44_RS43490 PF04686 Streptomyces sporulation and cell division protein, SsgA SMD44_RS43555 PF14659 Phage integrase, N-terminal SAM-like domain SMD44_RS43555 PF00589 Phage integrase family SMD44_RS43560 PF18395 Cas3 C-terminal domain SMD44_RS43560 PF18019 HD domain SMD44_RS43575 PF09344 CT1975-like protein SMD44_RS43590 PF01867 CRISPR associated protein Cas1 SMD44_RS43595 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) SMD44_RS43635 PF01695 IstB-like ATP binding protein SMD44_RS43665 PF01551 Peptidase family M23 SMD44_RS43665 PF10145 Phage-related minor tail protein SMD44_RS43665 PF01464 Transglycosylase SLT domain SMD44_RS43715 PF01980 tRNA-methyltransferase O SMD44_RS43750 PF00334 Nucleoside diphosphate kinase SMD44_RS43785 PF00583 Acetyltransferase (GNAT) family SMD44_RS43790 PF01443 Viral (Superfamily 1) RNA helicase SMD44_RS43790 PF03389 MobA/MobL family SMD44_RS43790 PF17841 BID domain of Bartonella effector protein (Bep) SMD44_RS43845 PF00005 ABC transporter