SE95_RS00050	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS00075	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS00210	SM00849	Metallo-beta-lactamase superfamily
SE95_RS00240	SM00829	Enoylreductase
SE95_RS00260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS00270	SM00226	Low molecular weight phosphatase family
SE95_RS00275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS00285	SM00422	helix_turn_helix, mercury resistance
SE95_RS00295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS00295	SM00387	Histidine kinase-like ATPases
SE95_RS00295	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS00300	SM00448	cheY-homologous receiver domain
SE95_RS00300	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS00330	SM00354	helix_turn _helix lactose operon repressor
SE95_RS00360	SM00344	helix_turn_helix ASNC type
SE95_RS00385	SM00494	Chitin-binding domain type 2
SE95_RS00455	SM00421	helix_turn_helix, Lux Regulon
SE95_RS00455	SM00448	cheY-homologous receiver domain
SE95_RS00655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS00655	SM00387	Histidine kinase-like ATPases
SE95_RS00655	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS00660	SM00448	cheY-homologous receiver domain
SE95_RS00660	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS00670	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS00730	SM00829	Enoylreductase
SE95_RS00785	SM00421	helix_turn_helix, Lux Regulon
SE95_RS00810	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS00845	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS00865	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS00880	SM00822	SE95_RS00880
SE95_RS00880	SM00823	Phosphopantetheine attachment site
SE95_RS00880	SM00824	Thioesterase
SE95_RS00880	SM00825	Beta-ketoacyl synthase
SE95_RS00880	SM00826	SE95_RS00880
SE95_RS00880	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS00880	SM01294	SE95_RS00880
SE95_RS00905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS00905	SM00091	PAS domain
SE95_RS00905	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS00915	SM00829	Enoylreductase
SE95_RS00930	SM00829	Enoylreductase
SE95_RS00950	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS00960	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS00965	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS00975	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS00975	SM00387	Histidine kinase-like ATPases
SE95_RS00980	SM00421	helix_turn_helix, Lux Regulon
SE95_RS00980	SM00448	cheY-homologous receiver domain
SE95_RS00990	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS00995	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS01000	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS01010	SM00448	cheY-homologous receiver domain
SE95_RS01010	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS01015	SM00387	Histidine kinase-like ATPases
SE95_RS01015	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS01155	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS01160	SM00849	Metallo-beta-lactamase superfamily
SE95_RS01180	SM00873	B3/4 domain
SE95_RS01190	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS01250	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SE95_RS01315	SM00421	helix_turn_helix, Lux Regulon
SE95_RS01315	SM00448	cheY-homologous receiver domain
SE95_RS01345	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS01390	SM00861	Transketolase, pyrimidine binding domain
SE95_RS01395	SM00028	Tetratricopeptide repeats
SE95_RS01395	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS01395	SM01043	Bacterial transcriptional activator domain
SE95_RS01405	SM00448	cheY-homologous receiver domain
SE95_RS01435	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS01450	SM00421	helix_turn_helix, Lux Regulon
SE95_RS01450	SM00448	cheY-homologous receiver domain
SE95_RS01460	SM00829	Enoylreductase
SE95_RS01480	SM00829	Enoylreductase
SE95_RS01485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS01510	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS01540	SM00849	Metallo-beta-lactamase superfamily
SE95_RS01570	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS01615	SM00387	Histidine kinase-like ATPases
SE95_RS01615	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS01640	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS01640	SM00458	Ricin-type beta-trefoil
SE95_RS01660	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS01675	SM00823	Phosphopantetheine attachment site
SE95_RS01710	SM00822	SE95_RS01710
SE95_RS01710	SM00823	Phosphopantetheine attachment site
SE95_RS01710	SM00825	Beta-ketoacyl synthase
SE95_RS01710	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS01770	SM00829	Enoylreductase
SE95_RS01800	SM00855	Phosphoglycerate mutase family
SE95_RS01860	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS01885	SM00984	UDP binding domain
SE95_RS01905	SM01350	SE95_RS01905
SE95_RS01910	SM00903	Flavin reductase like domain
SE95_RS01920	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS01940	SM00823	Phosphopantetheine attachment site
SE95_RS01970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS01970	SM00866	SE95_RS01970
SE95_RS02045	SM00421	helix_turn_helix, Lux Regulon
SE95_RS02125	SM00998	Adenylosuccinate lyase C-terminus
SE95_RS02140	SM00882	Coenzyme A transferase
SE95_RS02145	SM00882	Coenzyme A transferase
SE95_RS02150	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS02175	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS02215	SM00422	helix_turn_helix, mercury resistance
SE95_RS02225	SM00421	helix_turn_helix, Lux Regulon
SE95_RS02225	SM00448	cheY-homologous receiver domain
SE95_RS02230	SM00382	ATPases associated with a variety of cellular activities
SE95_RS02250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS02255	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SE95_RS02270	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS02295	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SE95_RS02345	SM00421	helix_turn_helix, Lux Regulon
SE95_RS02345	SM00448	cheY-homologous receiver domain
SE95_RS02385	SM01116	SE95_RS02385
SE95_RS02390	SM00947	Carbonic anhydrase
SE95_RS02425	SM00382	ATPases associated with a variety of cellular activities
SE95_RS02440	SM00387	Histidine kinase-like ATPases
SE95_RS02460	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS02500	SM00344	helix_turn_helix ASNC type
SE95_RS02535	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS02540	SM01120	SE95_RS02540
SE95_RS02595	SM00421	helix_turn_helix, Lux Regulon
SE95_RS02595	SM00448	cheY-homologous receiver domain
SE95_RS02630	SM00382	ATPases associated with a variety of cellular activities
SE95_RS02670	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS02705	SM00054	EF-hand, calcium binding motif
SE95_RS02755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS02820	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS02835	SM00822	SE95_RS02835
SE95_RS02850	SM00825	Beta-ketoacyl synthase
SE95_RS02860	SM00829	Enoylreductase
SE95_RS02875	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS02890	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS02890	SM01134	SE95_RS02890
SE95_RS02915	SM01329	SE95_RS02915
SE95_RS02940	SM00829	Enoylreductase
SE95_RS03110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS03115	SM00382	ATPases associated with a variety of cellular activities
SE95_RS03150	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS03155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS03160	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS03180	SM00947	Carbonic anhydrase
SE95_RS03230	SM00357	Cold shock protein domain
SE95_RS03235	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS03300	SM00860	SMI1 / KNR4 family
SE95_RS03385	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SE95_RS03390	SM00881	CoA binding domain
SE95_RS03540	SM00028	Tetratricopeptide repeats
SE95_RS03545	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS03555	SM00028	Tetratricopeptide repeats
SE95_RS03555	SM00382	ATPases associated with a variety of cellular activities
SE95_RS03600	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS03650	SM00422	helix_turn_helix, mercury resistance
SE95_RS03675	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS03740	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS03755	SM00829	Enoylreductase
SE95_RS03820	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS03820	SM00564	beta-propeller repeat
SE95_RS03825	SM00487	DEAD-like helicases superfamily
SE95_RS03825	SM00490	helicase superfamily c-terminal domain
SE95_RS03900	SM00631	SE95_RS03900
SE95_RS03925	SM00421	helix_turn_helix, Lux Regulon
SE95_RS03925	SM00448	cheY-homologous receiver domain
SE95_RS03950	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS03965	SM00382	ATPases associated with a variety of cellular activities
SE95_RS04040	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS04040	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS04080	SM01260	SE95_RS04080
SE95_RS04110	SM00287	Bacterial SH3 domain homologues
SE95_RS04140	SM00448	cheY-homologous receiver domain
SE95_RS04140	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS04145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS04145	SM00387	Histidine kinase-like ATPases
SE95_RS04145	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS04150	SM00947	Carbonic anhydrase
SE95_RS04180	SM00822	SE95_RS04180
SE95_RS04210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS04210	SM00387	Histidine kinase-like ATPases
SE95_RS04215	SM00421	helix_turn_helix, Lux Regulon
SE95_RS04215	SM00448	cheY-homologous receiver domain
SE95_RS04255	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SE95_RS04260	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS04380	SM00020	Trypsin-like serine protease
SE95_RS04405	SM00822	SE95_RS04405
SE95_RS04530	SM00421	helix_turn_helix, Lux Regulon
SE95_RS04530	SM00448	cheY-homologous receiver domain
SE95_RS04550	SM00448	cheY-homologous receiver domain
SE95_RS04550	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS04570	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
SE95_RS04590	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS04620	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS04625	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS04630	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS04630	SM00924	MgtE intracellular N domain
SE95_RS04660	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS04705	SM00382	ATPases associated with a variety of cellular activities
SE95_RS04765	SM00903	Flavin reductase like domain
SE95_RS04770	SM00857	Resolvase, N terminal domain
SE95_RS04835	SM00458	Ricin-type beta-trefoil
SE95_RS04850	SM00822	SE95_RS04850
SE95_RS04850	SM00823	Phosphopantetheine attachment site
SE95_RS04850	SM00825	Beta-ketoacyl synthase
SE95_RS04850	SM00826	SE95_RS04850
SE95_RS04850	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS04850	SM00829	Enoylreductase
SE95_RS04855	SM00822	SE95_RS04855
SE95_RS04860	SM00822	SE95_RS04860
SE95_RS04935	SM00382	ATPases associated with a variety of cellular activities
SE95_RS04950	SM00923	MbtH-like protein
SE95_RS04955	SM00823	Phosphopantetheine attachment site
SE95_RS04955	SM00824	Thioesterase
SE95_RS04960	SM00823	Phosphopantetheine attachment site
SE95_RS04965	SM00382	ATPases associated with a variety of cellular activities
SE95_RS04965	SM00421	helix_turn_helix, Lux Regulon
SE95_RS04970	SM00382	ATPases associated with a variety of cellular activities
SE95_RS04970	SM00421	helix_turn_helix, Lux Regulon
SE95_RS05005	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS05030	SM00829	Enoylreductase
SE95_RS05055	SM00448	cheY-homologous receiver domain
SE95_RS05060	SM00387	Histidine kinase-like ATPases
SE95_RS05075	SM00822	SE95_RS05075
SE95_RS05085	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS05110	SM00829	Enoylreductase
SE95_RS05125	SM00422	helix_turn_helix, mercury resistance
SE95_RS05130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS05130	SM00895	SE95_RS05130
SE95_RS05195	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS05215	SM00421	helix_turn_helix, Lux Regulon
SE95_RS05220	SM00421	helix_turn_helix, Lux Regulon
SE95_RS05230	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS05235	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS05250	SM00382	ATPases associated with a variety of cellular activities
SE95_RS05255	SM00382	ATPases associated with a variety of cellular activities
SE95_RS05305	SM00822	SE95_RS05305
SE95_RS05325	SM00947	Carbonic anhydrase
SE95_RS05345	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS05350	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS05405	SM00382	ATPases associated with a variety of cellular activities
SE95_RS05420	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS05455	SM00756	SE95_RS05455
SE95_RS05465	SM00894	Excalibur calcium-binding domain
SE95_RS05530	SM00382	ATPases associated with a variety of cellular activities
SE95_RS05535	SM00662	RNA polymerases D
SE95_RS05550	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS05555	SM00382	ATPases associated with a variety of cellular activities
SE95_RS05585	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SE95_RS05600	SM01209	SE95_RS05600
SE95_RS05625	SM00947	Carbonic anhydrase
SE95_RS05650	SM00226	Low molecular weight phosphatase family
SE95_RS05730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS05730	SM00895	SE95_RS05730
SE95_RS05740	SM00710	Parallel beta-helix repeats
SE95_RS05760	SM00984	UDP binding domain
SE95_RS05785	SM00829	Enoylreductase
SE95_RS05795	SM00710	Parallel beta-helix repeats
SE95_RS05795	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SE95_RS05860	SM00014	Acid phosphatase homologues
SE95_RS05865	SM00421	helix_turn_helix, Lux Regulon
SE95_RS05910	SM00450	Rhodanese Homology Domain
SE95_RS05915	SM00450	Rhodanese Homology Domain
SE95_RS05915	SM00849	Metallo-beta-lactamase superfamily
SE95_RS05925	SM00650	Ribosomal RNA adenine dimethylases
SE95_RS06025	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS06025	SM01043	Bacterial transcriptional activator domain
SE95_RS06030	SM00823	Phosphopantetheine attachment site
SE95_RS06030	SM00824	Thioesterase
SE95_RS06035	SM00923	MbtH-like protein
SE95_RS06040	SM00824	Thioesterase
SE95_RS06045	SM00823	Phosphopantetheine attachment site
SE95_RS06060	SM00421	helix_turn_helix, Lux Regulon
SE95_RS06070	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS06075	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS06080	SM00387	Histidine kinase-like ATPases
SE95_RS06095	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS06100	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS06135	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS06145	SM00829	Enoylreductase
SE95_RS06210	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS06220	SM00422	helix_turn_helix, mercury resistance
SE95_RS06235	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS06240	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS06245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS06245	SM00387	Histidine kinase-like ATPases
SE95_RS06245	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS06250	SM00448	cheY-homologous receiver domain
SE95_RS06250	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS06260	SM00900	SE95_RS06260
SE95_RS06310	SM00823	Phosphopantetheine attachment site
SE95_RS06310	SM00825	Beta-ketoacyl synthase
SE95_RS06310	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS06315	SM00823	Phosphopantetheine attachment site
SE95_RS06320	SM00825	Beta-ketoacyl synthase
SE95_RS06330	SM00923	MbtH-like protein
SE95_RS06360	SM00560	LamG-like jellyroll fold domain
SE95_RS06390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS06390	SM00387	Histidine kinase-like ATPases
SE95_RS06390	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS06395	SM00448	cheY-homologous receiver domain
SE95_RS06395	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS06405	SM00382	ATPases associated with a variety of cellular activities
SE95_RS06435	SM00849	Metallo-beta-lactamase superfamily
SE95_RS06475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS06475	SM00895	SE95_RS06475
SE95_RS06500	SM00422	helix_turn_helix, mercury resistance
SE95_RS06545	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS06550	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS06610	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS06615	SM00382	ATPases associated with a variety of cellular activities
SE95_RS06645	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS06655	SM00487	DEAD-like helicases superfamily
SE95_RS06655	SM00490	helicase superfamily c-terminal domain
SE95_RS06660	SM00357	Cold shock protein domain
SE95_RS06700	SM00495	Chitin-binding domain type 3
SE95_RS06740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS06740	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS06790	SM00822	SE95_RS06790
SE95_RS06800	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS06845	SM00382	ATPases associated with a variety of cellular activities
SE95_RS06845	SM01086	C-terminal, D2-small domain, of ClpB protein
SE95_RS06905	SM00382	ATPases associated with a variety of cellular activities
SE95_RS06910	SM00387	Histidine kinase-like ATPases
SE95_RS06915	SM00448	cheY-homologous receiver domain
SE95_RS06995	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SE95_RS07000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS07000	SM00895	SE95_RS07000
SE95_RS07015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS07040	SM00829	Enoylreductase
SE95_RS07045	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS07085	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07095	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS07145	SM00823	Phosphopantetheine attachment site
SE95_RS07145	SM00825	Beta-ketoacyl synthase
SE95_RS07145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS07155	SM00822	SE95_RS07155
SE95_RS07155	SM00823	Phosphopantetheine attachment site
SE95_RS07155	SM00825	Beta-ketoacyl synthase
SE95_RS07155	SM00826	SE95_RS07155
SE95_RS07155	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS07155	SM01294	SE95_RS07155
SE95_RS07165	SM00822	SE95_RS07165
SE95_RS07165	SM00823	Phosphopantetheine attachment site
SE95_RS07165	SM00824	Thioesterase
SE95_RS07165	SM00825	Beta-ketoacyl synthase
SE95_RS07165	SM00826	SE95_RS07165
SE95_RS07165	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS07165	SM00829	Enoylreductase
SE95_RS07165	SM01294	SE95_RS07165
SE95_RS07170	SM00822	SE95_RS07170
SE95_RS07170	SM00823	Phosphopantetheine attachment site
SE95_RS07170	SM00825	Beta-ketoacyl synthase
SE95_RS07170	SM00826	SE95_RS07170
SE95_RS07170	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS07170	SM01294	SE95_RS07170
SE95_RS07175	SM00822	SE95_RS07175
SE95_RS07175	SM00823	Phosphopantetheine attachment site
SE95_RS07175	SM00825	Beta-ketoacyl synthase
SE95_RS07175	SM00826	SE95_RS07175
SE95_RS07175	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS07175	SM01294	SE95_RS07175
SE95_RS07180	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07185	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07190	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07195	SM00028	Tetratricopeptide repeats
SE95_RS07195	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07205	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07210	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07215	SM00829	Enoylreductase
SE95_RS07235	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07235	SM00448	cheY-homologous receiver domain
SE95_RS07240	SM00387	Histidine kinase-like ATPases
SE95_RS07265	SM00849	Metallo-beta-lactamase superfamily
SE95_RS07305	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07330	SM00829	Enoylreductase
SE95_RS07335	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS07415	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SE95_RS07420	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS07445	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS07500	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS07505	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07510	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07525	SM00481	DNA polymerase alpha chain like domain
SE95_RS07555	SM00091	PAS domain
SE95_RS07555	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS07625	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS07655	SM00947	Carbonic anhydrase
SE95_RS07670	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07695	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS07780	SM00849	Metallo-beta-lactamase superfamily
SE95_RS07835	SM00710	Parallel beta-helix repeats
SE95_RS07860	SM00825	Beta-ketoacyl synthase
SE95_RS07865	SM00825	Beta-ketoacyl synthase
SE95_RS07890	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS07895	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07910	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07945	SM00986	Uracil DNA glycosylase superfamily
SE95_RS07945	SM00987	UreE urease accessory protein, C-terminal domain 
SE95_RS07960	SM00822	SE95_RS07960
SE95_RS07980	SM00382	ATPases associated with a variety of cellular activities
SE95_RS07985	SM00822	SE95_RS07985
SE95_RS07995	SM00421	helix_turn_helix, Lux Regulon
SE95_RS07995	SM00448	cheY-homologous receiver domain
SE95_RS08050	SM00020	Trypsin-like serine protease
SE95_RS08060	SM00495	Chitin-binding domain type 3
SE95_RS08080	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS08095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08095	SM00895	SE95_RS08095
SE95_RS08110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08110	SM00866	SE95_RS08110
SE95_RS08135	SM00255	Toll - interleukin 1 - resistance
SE95_RS08135	SM00320	WD40 repeats
SE95_RS08180	SM01130	SE95_RS08180
SE95_RS08200	SM00382	ATPases associated with a variety of cellular activities
SE95_RS08210	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS08245	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS08280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08320	SM00421	helix_turn_helix, Lux Regulon
SE95_RS08320	SM00448	cheY-homologous receiver domain
SE95_RS08325	SM00387	Histidine kinase-like ATPases
SE95_RS08370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08390	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS08445	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS08480	SM00422	helix_turn_helix, mercury resistance
SE95_RS08490	SM00422	helix_turn_helix, mercury resistance
SE95_RS08495	SM00240	Forkhead associated domain
SE95_RS08585	SM00382	ATPases associated with a variety of cellular activities
SE95_RS08595	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS08620	SM00960	Roadblock/LC7 domain
SE95_RS08625	SM00387	Histidine kinase-like ATPases
SE95_RS08640	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS08675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08675	SM00895	SE95_RS08675
SE95_RS08685	SM00796	Allophanate hydrolase subunit 1
SE95_RS08690	SM00797	Allophanate hydrolase subunit 2
SE95_RS08720	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SE95_RS08720	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS08735	SM00644	SE95_RS08735
SE95_RS08785	SM00830	Chorismate mutase type II
SE95_RS08840	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS08890	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
SE95_RS08915	SM00481	DNA polymerase alpha chain like domain
SE95_RS08925	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS08940	SM00710	Parallel beta-helix repeats
SE95_RS08950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS08985	SM00357	Cold shock protein domain
SE95_RS09000	SM01120	SE95_RS09000
SE95_RS09030	SM01150	SE95_RS09030
SE95_RS09050	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS09050	SM01134	SE95_RS09050
SE95_RS09110	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS09185	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09185	SM00710	Parallel beta-helix repeats
SE95_RS09185	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
SE95_RS09195	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS09195	SM01134	SE95_RS09195
SE95_RS09270	SM00421	helix_turn_helix, Lux Regulon
SE95_RS09270	SM00448	cheY-homologous receiver domain
SE95_RS09305	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS09315	SM00354	helix_turn _helix lactose operon repressor
SE95_RS09330	SM00893	Electron transfer flavoprotein domain
SE95_RS09335	SM00893	Electron transfer flavoprotein domain
SE95_RS09340	SM00903	Flavin reductase like domain
SE95_RS09350	SM00563	Phosphate acyltransferases
SE95_RS09385	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS09395	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09430	SM00822	SE95_RS09430
SE95_RS09440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS09440	SM00895	SE95_RS09440
SE95_RS09470	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS09475	SM00822	SE95_RS09475
SE95_RS09480	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09525	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS09580	SM01236	SE95_RS09580
SE95_RS09595	SM01192	SE95_RS09595
SE95_RS09595	SM01193	SE95_RS09595
SE95_RS09610	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09615	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS09620	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS09620	SM01091	Transporter associated domain
SE95_RS09695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS09695	SM00866	SE95_RS09695
SE95_RS09745	SM00344	helix_turn_helix ASNC type
SE95_RS09755	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS09755	SM01240	SE95_RS09755
SE95_RS09835	SM01409	SE95_RS09835
SE95_RS09840	SM00072	Guanylate kinase homologues.
SE95_RS09850	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SE95_RS09860	SM00851	MGS-like domain
SE95_RS09860	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SE95_RS09865	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SE95_RS09890	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS09900	SM00841	Elongation factor P, C-terminal
SE95_RS09900	SM01185	SE95_RS09900
SE95_RS09925	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09950	SM00732	Likely ribonuclease with RNase H fold.
SE95_RS09955	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SE95_RS09975	SM00363	S4 RNA-binding domain
SE95_RS09975	SM01390	SE95_RS09975
SE95_RS09985	SM00382	ATPases associated with a variety of cellular activities
SE95_RS09990	SM00756	SE95_RS09990
SE95_RS10000	SM00849	Metallo-beta-lactamase superfamily
SE95_RS10015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS10015	SM00954	Region found in RelA / SpoT proteins
SE95_RS10035	SM01323	SE95_RS10035
SE95_RS10040	SM00382	ATPases associated with a variety of cellular activities
SE95_RS10045	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SE95_RS10095	SM00838	Elongation factor G C-terminus
SE95_RS10095	SM00889	Elongation factor G, domain IV
SE95_RS10120	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SE95_RS10135	SM00479	SE95_RS10135
SE95_RS10220	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS10260	SM00382	ATPases associated with a variety of cellular activities
SE95_RS10260	SM00930	SE95_RS10260
SE95_RS10285	SM00563	Phosphate acyltransferases
SE95_RS10345	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SE95_RS10355	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS10370	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS10390	SM00421	helix_turn_helix, Lux Regulon
SE95_RS10400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS10455	SM00873	B3/4 domain
SE95_RS10455	SM00874	tRNA synthetase B5 domain
SE95_RS10455	SM00896	Ferredoxin-fold anticodon binding domain
SE95_RS10465	SM00091	PAS domain
SE95_RS10465	SM00387	Histidine kinase-like ATPases
SE95_RS10465	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS10470	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SE95_RS10535	SM01230	SE95_RS10535
SE95_RS10540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS10540	SM00895	SE95_RS10540
SE95_RS10555	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS10590	SM00382	ATPases associated with a variety of cellular activities
SE95_RS10595	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SE95_RS10595	SM00475	5'-3' exonuclease
SE95_RS10605	SM00422	helix_turn_helix, mercury resistance
SE95_RS10625	SM00487	DEAD-like helicases superfamily
SE95_RS10625	SM00490	helicase superfamily c-terminal domain
SE95_RS10625	SM01142	SE95_RS10625
SE95_RS10680	SM00354	helix_turn _helix lactose operon repressor
SE95_RS10710	SM00382	ATPases associated with a variety of cellular activities
SE95_RS10745	SM00421	helix_turn_helix, Lux Regulon
SE95_RS10745	SM00448	cheY-homologous receiver domain
SE95_RS10765	SM01018	B12 binding domain
SE95_RS10770	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS10795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS10795	SM00895	SE95_RS10795
SE95_RS10820	SM00382	ATPases associated with a variety of cellular activities
SE95_RS10835	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SE95_RS10860	SM00855	Phosphoglycerate mutase family
SE95_RS10940	SM00448	cheY-homologous receiver domain
SE95_RS10940	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS10950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS10965	SM00822	SE95_RS10965
SE95_RS10985	SM00849	Metallo-beta-lactamase superfamily
SE95_RS11020	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
SE95_RS11025	SM00560	LamG-like jellyroll fold domain
SE95_RS11065	SM00422	helix_turn_helix, mercury resistance
SE95_RS11095	SM00829	Enoylreductase
SE95_RS11115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS11115	SM00866	SE95_RS11115
SE95_RS11160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS11175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS11175	SM00091	PAS domain
SE95_RS11175	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS11180	SM00829	Enoylreductase
SE95_RS11190	SM00344	helix_turn_helix ASNC type
SE95_RS11210	SM00481	DNA polymerase alpha chain like domain
SE95_RS11220	SM00822	SE95_RS11220
SE95_RS11240	SM00244	prohibitin homologues
SE95_RS11265	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS11270	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11295	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS11315	SM00960	Roadblock/LC7 domain
SE95_RS11345	SM00014	Acid phosphatase homologues
SE95_RS11385	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11390	SM00563	Phosphate acyltransferases
SE95_RS11420	SM00363	S4 RNA-binding domain
SE95_RS11445	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SE95_RS11445	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SE95_RS11450	SM00028	Tetratricopeptide repeats
SE95_RS11450	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11495	SM00245	tail specific protease
SE95_RS11505	SM00363	S4 RNA-binding domain
SE95_RS11520	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11565	SM01006	Siderophore biosynthesis protein domain
SE95_RS11610	SM00507	HNH nucleases
SE95_RS11620	SM00244	prohibitin homologues
SE95_RS11630	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11650	SM00421	helix_turn_helix, Lux Regulon
SE95_RS11650	SM00448	cheY-homologous receiver domain
SE95_RS11655	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS11655	SM00387	Histidine kinase-like ATPases
SE95_RS11670	SM00240	Forkhead associated domain
SE95_RS11670	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11680	SM00855	Phosphoglycerate mutase family
SE95_RS11695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS11695	SM00895	SE95_RS11695
SE95_RS11705	SM00822	SE95_RS11705
SE95_RS11735	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS11760	SM00422	helix_turn_helix, mercury resistance
SE95_RS11800	SM00479	SE95_RS11800
SE95_RS11820	SM00822	SE95_RS11820
SE95_RS11865	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11880	SM01007	Class II Aldolase and Adducin N-terminal domain
SE95_RS11885	SM00641	Glycosyl hydrolases family 25
SE95_RS11910	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS11910	SM00382	ATPases associated with a variety of cellular activities
SE95_RS11945	SM00822	SE95_RS11945
SE95_RS11955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS12015	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS12035	SM01130	SE95_RS12035
SE95_RS12110	SM00382	ATPases associated with a variety of cellular activities
SE95_RS12135	SM00382	ATPases associated with a variety of cellular activities
SE95_RS12165	SM00861	Transketolase, pyrimidine binding domain
SE95_RS12220	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SE95_RS12240	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SE95_RS12240	SM00465	GIY-YIG type nucleases (URI domain)
SE95_RS12270	SM00829	Enoylreductase
SE95_RS12275	SM00354	helix_turn _helix lactose operon repressor
SE95_RS12305	SM00849	Metallo-beta-lactamase superfamily
SE95_RS12325	SM00487	DEAD-like helicases superfamily
SE95_RS12325	SM00490	helicase superfamily c-terminal domain
SE95_RS12365	SM00829	Enoylreductase
SE95_RS12400	SM00487	DEAD-like helicases superfamily
SE95_RS12400	SM00490	helicase superfamily c-terminal domain
SE95_RS12410	SM00028	Tetratricopeptide repeats
SE95_RS12430	SM00710	Parallel beta-helix repeats
SE95_RS12435	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS12445	SM00487	DEAD-like helicases superfamily
SE95_RS12445	SM00490	helicase superfamily c-terminal domain
SE95_RS12445	SM00847	Helicase associated domain (HA2)  Add an annotation
SE95_RS12470	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SE95_RS12470	SM00475	5'-3' exonuclease
SE95_RS12470	SM00482	DNA polymerase A domain
SE95_RS12500	SM00382	ATPases associated with a variety of cellular activities
SE95_RS12505	SM00382	ATPases associated with a variety of cellular activities
SE95_RS12510	SM00448	cheY-homologous receiver domain
SE95_RS12510	SM01012	SE95_RS12510
SE95_RS12555	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS12575	SM00387	Histidine kinase-like ATPases
SE95_RS12580	SM00421	helix_turn_helix, Lux Regulon
SE95_RS12580	SM00448	cheY-homologous receiver domain
SE95_RS12600	SM00020	Trypsin-like serine protease
SE95_RS12615	SM00354	helix_turn _helix lactose operon repressor
SE95_RS12620	SM00849	Metallo-beta-lactamase superfamily
SE95_RS12635	SM00822	SE95_RS12635
SE95_RS12640	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS12645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS12790	SM00464	Found in ATP-dependent protease La (LON)
SE95_RS12810	SM00382	ATPases associated with a variety of cellular activities
SE95_RS12820	SM00481	DNA polymerase alpha chain like domain
SE95_RS12910	SM00864	Tubulin/FtsZ family, GTPase domain
SE95_RS12910	SM00865	Tubulin/FtsZ family, C-terminal domain
SE95_RS12965	SM00947	Carbonic anhydrase
SE95_RS12980	SM00460	Transglutaminase/protease-like homologues
SE95_RS13065	SM00422	helix_turn_helix, mercury resistance
SE95_RS13070	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS13070	SM00740	SE95_RS13070
SE95_RS13075	SM00518	AP endonuclease family 2
SE95_RS13115	SM00421	helix_turn_helix, Lux Regulon
SE95_RS13115	SM00448	cheY-homologous receiver domain
SE95_RS13125	SM00563	Phosphate acyltransferases
SE95_RS13250	SM00448	cheY-homologous receiver domain
SE95_RS13330	SM00849	Metallo-beta-lactamase superfamily
SE95_RS13340	SM00421	helix_turn_helix, Lux Regulon
SE95_RS13340	SM00448	cheY-homologous receiver domain
SE95_RS13410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS13410	SM00895	SE95_RS13410
SE95_RS13460	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS13480	SM01230	SE95_RS13480
SE95_RS13500	SM01230	SE95_RS13500
SE95_RS13515	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS13520	SM00563	Phosphate acyltransferases
SE95_RS13535	SM00421	helix_turn_helix, Lux Regulon
SE95_RS13535	SM00448	cheY-homologous receiver domain
SE95_RS13575	SM00354	helix_turn _helix lactose operon repressor
SE95_RS13580	SM00642	Alpha-amylase domain
SE95_RS13600	SM00642	Alpha-amylase domain
SE95_RS13605	SM00354	helix_turn _helix lactose operon repressor
SE95_RS13635	SM01230	SE95_RS13635
SE95_RS13685	SM00382	ATPases associated with a variety of cellular activities
SE95_RS13705	SM00382	ATPases associated with a variety of cellular activities
SE95_RS13715	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS13715	SM01043	Bacterial transcriptional activator domain
SE95_RS13750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS13750	SM00895	SE95_RS13750
SE95_RS13755	SM01130	SE95_RS13755
SE95_RS13790	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SE95_RS13910	SM00422	helix_turn_helix, mercury resistance
SE95_RS13920	SM00955	SE95_RS13920
SE95_RS13935	SM00855	Phosphoglycerate mutase family
SE95_RS13960	SM00822	SE95_RS13960
SE95_RS13965	SM00829	Enoylreductase
SE95_RS13980	SM00421	helix_turn_helix, Lux Regulon
SE95_RS13980	SM00448	cheY-homologous receiver domain
SE95_RS14005	SM00646	SE95_RS14005
SE95_RS14060	SM00849	Metallo-beta-lactamase superfamily
SE95_RS14080	SM00382	ATPases associated with a variety of cellular activities
SE95_RS14155	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS14230	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS14280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS14280	SM00895	SE95_RS14280
SE95_RS14285	SM00834	Putative regulatory protein
SE95_RS14385	SM00421	helix_turn_helix, Lux Regulon
SE95_RS14385	SM00448	cheY-homologous receiver domain
SE95_RS14405	SM00422	helix_turn_helix, mercury resistance
SE95_RS14425	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS14440	SM00825	Beta-ketoacyl synthase
SE95_RS14465	SM01217	SE95_RS14465
SE95_RS14495	SM00382	ATPases associated with a variety of cellular activities
SE95_RS14500	SM00354	helix_turn _helix lactose operon repressor
SE95_RS14510	SM00829	Enoylreductase
SE95_RS14515	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS14595	SM00855	Phosphoglycerate mutase family
SE95_RS14645	SM00400	zinc finger
SE95_RS14645	SM00493	SE95_RS14645
SE95_RS14645	SM00766	DNA primase DnaG DnaB-binding
SE95_RS14660	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS14670	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SE95_RS14715	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS14745	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS14760	SM00822	SE95_RS14760
SE95_RS14815	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS14820	SM00344	helix_turn_helix ASNC type
SE95_RS14840	SM00849	Metallo-beta-lactamase superfamily
SE95_RS14870	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS14900	SM00382	ATPases associated with a variety of cellular activities
SE95_RS14945	SM00960	Roadblock/LC7 domain
SE95_RS14975	SM00917	LeuA allosteric (dimerisation) domain
SE95_RS15005	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS15005	SM01091	Transporter associated domain
SE95_RS15030	SM00849	Metallo-beta-lactamase superfamily
SE95_RS15035	SM00829	Enoylreductase
SE95_RS15040	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SE95_RS15080	SM00271	DnaJ molecular chaperone homology domain
SE95_RS15090	SM00849	Metallo-beta-lactamase superfamily
SE95_RS15105	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS15110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS15110	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS15120	SM00838	Elongation factor G C-terminus
SE95_RS15175	SM00944	Pro-kumamolisin, activation domain
SE95_RS15200	SM00855	Phosphoglycerate mutase family
SE95_RS15245	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
SE95_RS15270	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS15285	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS15290	SM00880	SE95_RS15290
SE95_RS15290	SM01118	SE95_RS15290
SE95_RS15325	SM00562	SE95_RS15325
SE95_RS15360	SM00382	ATPases associated with a variety of cellular activities
SE95_RS15360	SM00994	ClpX C4-type zinc finger
SE95_RS15360	SM01086	C-terminal, D2-small domain, of ClpB protein
SE95_RS15405	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS15415	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SE95_RS15415	SM01232	SE95_RS15415
SE95_RS15465	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SE95_RS15520	SM00507	HNH nucleases
SE95_RS15575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS15575	SM00895	SE95_RS15575
SE95_RS15585	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS15595	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS15600	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS15600	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SE95_RS15635	SM00382	ATPases associated with a variety of cellular activities
SE95_RS15690	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS15725	SM00382	ATPases associated with a variety of cellular activities
SE95_RS15725	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS15785	SM00354	helix_turn _helix lactose operon repressor
SE95_RS15815	SM00382	ATPases associated with a variety of cellular activities
SE95_RS15835	SM00354	helix_turn _helix lactose operon repressor
SE95_RS15855	SM00382	ATPases associated with a variety of cellular activities
SE95_RS15945	SM00878	Biotin carboxylase C-terminal domain
SE95_RS15980	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS15985	SM00479	SE95_RS15985
SE95_RS16000	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS16010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS16010	SM00387	Histidine kinase-like ATPases
SE95_RS16010	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS16015	SM00448	cheY-homologous receiver domain
SE95_RS16015	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS16065	SM00855	Phosphoglycerate mutase family
SE95_RS16105	SM00052	Putative diguanylate phosphodiesterase
SE95_RS16105	SM00091	PAS domain
SE95_RS16105	SM00267	diguanylate cyclase
SE95_RS16140	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS16155	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16160	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS16230	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS16245	SM00866	SE95_RS16245
SE95_RS16290	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16315	SM00883	Chaperonin 10 Kd subunit
SE95_RS16330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS16330	SM00387	Histidine kinase-like ATPases
SE95_RS16330	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS16345	SM00507	HNH nucleases
SE95_RS16390	SM00849	Metallo-beta-lactamase superfamily
SE95_RS16410	SM00232	JAB/MPN domain
SE95_RS16495	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS16520	SM00344	helix_turn_helix ASNC type
SE95_RS16530	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16550	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS16555	SM00487	DEAD-like helicases superfamily
SE95_RS16580	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS16630	SM00411	bacterial (prokaryotic) histone like domain
SE95_RS16635	SM00919	Malic enzyme, NAD binding domain
SE95_RS16635	SM01274	SE95_RS16635
SE95_RS16660	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS16700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SE95_RS16700	SM00245	tail specific protease
SE95_RS16710	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16720	SM00937	SE95_RS16720
SE95_RS16725	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS16730	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS16735	SM00240	Forkhead associated domain
SE95_RS16785	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS16820	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS16835	SM00382	ATPases associated with a variety of cellular activities
SE95_RS16860	SM00957	SecA DEAD-like domain
SE95_RS16860	SM00958	SecA preprotein cross-linking domain
SE95_RS16875	SM00421	helix_turn_helix, Lux Regulon
SE95_RS16875	SM00448	cheY-homologous receiver domain
SE95_RS16890	SM00909	Sporulation and spore germination
SE95_RS16895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS16895	SM00387	Histidine kinase-like ATPases
SE95_RS16895	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS16900	SM00448	cheY-homologous receiver domain
SE95_RS16900	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS16970	SM00996	S-adenosyl-L-homocysteine hydrolase
SE95_RS16970	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SE95_RS17050	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
SE95_RS17105	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS17170	SM00984	UDP binding domain
SE95_RS17180	SM01001	AIR carboxylase
SE95_RS17200	SM00387	Histidine kinase-like ATPases
SE95_RS17200	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS17205	SM00448	cheY-homologous receiver domain
SE95_RS17205	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS17280	SM00382	ATPases associated with a variety of cellular activities
SE95_RS17315	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS17365	SM00382	ATPases associated with a variety of cellular activities
SE95_RS17375	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
SE95_RS17400	SM01192	SE95_RS17400
SE95_RS17400	SM01193	SE95_RS17400
SE95_RS17405	SM00257	Lysin motif
SE95_RS17435	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS17445	SM00671	Sel1-like repeats.
SE95_RS17460	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS17490	SM00487	DEAD-like helicases superfamily
SE95_RS17490	SM00490	helicase superfamily c-terminal domain
SE95_RS17490	SM00982	SE95_RS17490
SE95_RS17490	SM01058	CarD-like/TRCF domain
SE95_RS17510	SM00860	SMI1 / KNR4 family
SE95_RS17540	SM01400	SE95_RS17540
SE95_RS17580	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS17585	SM00822	SE95_RS17585
SE95_RS17595	SM00421	helix_turn_helix, Lux Regulon
SE95_RS17595	SM00448	cheY-homologous receiver domain
SE95_RS17625	SM00421	helix_turn_helix, Lux Regulon
SE95_RS17630	SM00382	ATPases associated with a variety of cellular activities
SE95_RS17670	SM00650	Ribosomal RNA adenine dimethylases
SE95_RS17675	SM01208	SE95_RS17675
SE95_RS17725	SM00382	ATPases associated with a variety of cellular activities
SE95_RS17745	SM00245	tail specific protease
SE95_RS17750	SM00822	SE95_RS17750
SE95_RS17765	SM00422	helix_turn_helix, mercury resistance
SE95_RS17790	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS17815	SM00382	ATPases associated with a variety of cellular activities
SE95_RS17825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS17830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS17830	SM00387	Histidine kinase-like ATPases
SE95_RS17830	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS17840	SM00422	helix_turn_helix, mercury resistance
SE95_RS17870	SM00852	Probable molybdopterin binding domain
SE95_RS17880	SM00852	Probable molybdopterin binding domain
SE95_RS17910	SM00834	Putative regulatory protein
SE95_RS17945	SM00450	Rhodanese Homology Domain
SE95_RS17945	SM00849	Metallo-beta-lactamase superfamily
SE95_RS17950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS17950	SM00866	SE95_RS17950
SE95_RS17965	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS17965	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SE95_RS17965	SM00422	helix_turn_helix, mercury resistance
SE95_RS18035	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS18035	SM01134	SE95_RS18035
SE95_RS18070	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS18135	SM00341	Helicase and RNase D C-terminal
SE95_RS18135	SM00487	DEAD-like helicases superfamily
SE95_RS18135	SM00490	helicase superfamily c-terminal domain
SE95_RS18135	SM00956	SE95_RS18135
SE95_RS18140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS18140	SM00387	Histidine kinase-like ATPases
SE95_RS18140	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS18160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS18180	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS18225	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS18240	SM00481	DNA polymerase alpha chain like domain
SE95_RS18280	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS18290	SM00028	Tetratricopeptide repeats
SE95_RS18290	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS18290	SM01043	Bacterial transcriptional activator domain
SE95_RS18355	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS18355	SM00564	beta-propeller repeat
SE95_RS18395	SM00881	CoA binding domain
SE95_RS18415	SM00903	Flavin reductase like domain
SE95_RS18425	SM00829	Enoylreductase
SE95_RS18435	SM00822	SE95_RS18435
SE95_RS18470	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS18475	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS18490	SM00984	UDP binding domain
SE95_RS18495	SM01240	SE95_RS18495
SE95_RS18500	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS18500	SM01240	SE95_RS18500
SE95_RS18510	SM00421	helix_turn_helix, Lux Regulon
SE95_RS18510	SM00448	cheY-homologous receiver domain
SE95_RS18530	SM00822	SE95_RS18530
SE95_RS18545	SM00883	Chaperonin 10 Kd subunit
SE95_RS18600	SM01005	Alanine racemase, C-terminal domain
SE95_RS18660	SM00662	RNA polymerases D
SE95_RS18665	SM00363	S4 RNA-binding domain
SE95_RS18665	SM01390	SE95_RS18665
SE95_RS18685	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS18750	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SE95_RS18755	SM01374	SE95_RS18755
SE95_RS18775	SM00322	K homology RNA-binding domain
SE95_RS18790	SM01382	SE95_RS18790
SE95_RS18790	SM01383	SE95_RS18790
SE95_RS18810	SM01403	SE95_RS18810
SE95_RS18820	SM00838	Elongation factor G C-terminus
SE95_RS18820	SM00889	Elongation factor G, domain IV
SE95_RS18840	SM00663	RNA polymerase I subunit A N-terminus
SE95_RS18875	SM00649	Ribosomal protein L11/L12
SE95_RS18880	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SE95_RS18880	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SE95_RS19035	SM00421	helix_turn_helix, Lux Regulon
SE95_RS19035	SM00448	cheY-homologous receiver domain
SE95_RS19060	SM00382	ATPases associated with a variety of cellular activities
SE95_RS19125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SE95_RS19125	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SE95_RS19130	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
SE95_RS19190	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS19205	SM00357	Cold shock protein domain
SE95_RS19250	SM00344	helix_turn_helix ASNC type
SE95_RS19360	SM00855	Phosphoglycerate mutase family
SE95_RS19375	SM00822	SE95_RS19375
SE95_RS19405	SM00822	SE95_RS19405
SE95_RS19445	SM00836	DALR anticodon binding domain
SE95_RS19445	SM01016	Arginyl tRNA synthetase N terminal dom
SE95_RS19450	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS19465	SM01004	Delta-aminolevulinic acid dehydratase
SE95_RS19485	SM00881	CoA binding domain
SE95_RS19510	SM00563	Phosphate acyltransferases
SE95_RS19520	SM01155	SE95_RS19520
SE95_RS19570	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS19580	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS19595	SM00776	SE95_RS19595
SE95_RS19645	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS19655	SM00487	DEAD-like helicases superfamily
SE95_RS19655	SM00490	helicase superfamily c-terminal domain
SE95_RS19730	SM00382	ATPases associated with a variety of cellular activities
SE95_RS19730	SM00487	DEAD-like helicases superfamily
SE95_RS19730	SM00490	helicase superfamily c-terminal domain
SE95_RS19730	SM00847	Helicase associated domain (HA2)  Add an annotation
SE95_RS19755	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SE95_RS19805	SM01211	SE95_RS19805
SE95_RS19860	SM01209	SE95_RS19860
SE95_RS19860	SM01210	SE95_RS19860
SE95_RS19875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS19890	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS19895	SM00788	Adenylosuccinate synthetase
SE95_RS19910	SM00382	ATPases associated with a variety of cellular activities
SE95_RS19920	SM00421	helix_turn_helix, Lux Regulon
SE95_RS19920	SM00448	cheY-homologous receiver domain
SE95_RS20005	SM00382	ATPases associated with a variety of cellular activities
SE95_RS20005	SM01086	C-terminal, D2-small domain, of ClpB protein
SE95_RS20025	SM00422	helix_turn_helix, mercury resistance
SE95_RS20030	SM00271	DnaJ molecular chaperone homology domain
SE95_RS20055	SM00458	Ricin-type beta-trefoil
SE95_RS20095	SM00382	ATPases associated with a variety of cellular activities
SE95_RS20110	SM00560	LamG-like jellyroll fold domain
SE95_RS20125	SM00854	Bacterial capsule synthesis protein PGA_cap
SE95_RS20145	SM00028	Tetratricopeptide repeats
SE95_RS20145	SM01043	Bacterial transcriptional activator domain
SE95_RS20150	SM00257	Lysin motif
SE95_RS20160	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS20165	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS20290	SM00829	Enoylreductase
SE95_RS20295	SM00382	ATPases associated with a variety of cellular activities
SE95_RS20330	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS20345	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS20375	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS20375	SM01043	Bacterial transcriptional activator domain
SE95_RS20420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS20420	SM00895	SE95_RS20420
SE95_RS20435	SM00861	Transketolase, pyrimidine binding domain
SE95_RS20445	SM00421	helix_turn_helix, Lux Regulon
SE95_RS20445	SM00448	cheY-homologous receiver domain
SE95_RS20460	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS20465	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS20480	SM00829	Enoylreductase
SE95_RS20490	SM00852	Probable molybdopterin binding domain
SE95_RS20505	SM00861	Transketolase, pyrimidine binding domain
SE95_RS20515	SM00344	helix_turn_helix ASNC type
SE95_RS20540	SM00752	Horizontally Transferred TransMembrane Domain
SE95_RS20580	SM00450	Rhodanese Homology Domain
SE95_RS20600	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS20630	SM00240	Forkhead associated domain
SE95_RS20635	SM00240	Forkhead associated domain
SE95_RS20640	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS20640	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SE95_RS20660	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS20660	SM00740	SE95_RS20660
SE95_RS20730	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS20750	SM00434	DNA Topoisomerase IV
SE95_RS20755	SM00387	Histidine kinase-like ATPases
SE95_RS20755	SM00433	TopoisomeraseII
SE95_RS20770	SM01350	SE95_RS20770
SE95_RS20775	SM00480	DNA polymerase III beta subunit
SE95_RS20785	SM00382	ATPases associated with a variety of cellular activities
SE95_RS20785	SM00760	Bacterial dnaA protein helix-turn-helix domain
SE95_RS20800	SM01234	SE95_RS20800
SE95_RS20810	SM00393	Putative single-stranded nucleic acids-binding domain
SE95_RS20825	SM00470	ParB-like nuclease domain
SE95_RS20870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS20950	SM00382	ATPases associated with a variety of cellular activities
SE95_RS20970	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS20970	SM01043	Bacterial transcriptional activator domain
SE95_RS20995	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS21035	SM00226	Low molecular weight phosphatase family
SE95_RS21050	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS21080	SM00354	helix_turn _helix lactose operon repressor
SE95_RS21110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS21110	SM00387	Histidine kinase-like ATPases
SE95_RS21155	SM00422	helix_turn_helix, mercury resistance
SE95_RS21165	SM00822	SE95_RS21165
SE95_RS21175	SM00382	ATPases associated with a variety of cellular activities
SE95_RS21185	SM00382	ATPases associated with a variety of cellular activities
SE95_RS21205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS21205	SM00895	SE95_RS21205
SE95_RS21240	SM00344	helix_turn_helix ASNC type
SE95_RS21345	SM00382	ATPases associated with a variety of cellular activities
SE95_RS21370	SM00822	SE95_RS21370
SE95_RS21380	SM01011	Aminopeptidase P, N-terminal domain
SE95_RS21385	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS21390	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SE95_RS21415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SE95_RS21430	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS21445	SM00942	Primase C terminal 1 (PriCT-1)
SE95_RS21445	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SE95_RS21490	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS21500	SM00448	cheY-homologous receiver domain
SE95_RS21510	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS21525	SM00448	cheY-homologous receiver domain
SE95_RS21530	SM00091	PAS domain
SE95_RS21545	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS21585	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS21605	SM00448	cheY-homologous receiver domain
SE95_RS21605	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS21610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS21610	SM00387	Histidine kinase-like ATPases
SE95_RS21610	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS21645	SM00867	YceI-like domain 
SE95_RS21655	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS21675	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS21690	SM00866	SE95_RS21690
SE95_RS21710	SM00886	Stress responsive A/B Barrel Domain
SE95_RS21740	SM00822	SE95_RS21740
SE95_RS21745	SM00822	SE95_RS21745
SE95_RS21805	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SE95_RS21815	SM00829	Enoylreductase
SE95_RS21820	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS21835	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS21855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS21895	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS21920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS21920	SM00866	SE95_RS21920
SE95_RS21975	SM00344	helix_turn_helix ASNC type
SE95_RS21980	SM00421	helix_turn_helix, Lux Regulon
SE95_RS21980	SM00448	cheY-homologous receiver domain
SE95_RS21985	SM00387	Histidine kinase-like ATPases
SE95_RS21995	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS22025	SM00866	SE95_RS22025
SE95_RS22045	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22055	SM00493	SE95_RS22055
SE95_RS22070	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SE95_RS22115	SM00320	WD40 repeats
SE95_RS22175	SM00849	Metallo-beta-lactamase superfamily
SE95_RS22185	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS22185	SM00419	helix_turn_helix, cAMP Regulatory protein
SE95_RS22190	SM00478	endonuclease III
SE95_RS22190	SM00525	SE95_RS22190
SE95_RS22230	SM00947	Carbonic anhydrase
SE95_RS22290	SM00487	DEAD-like helicases superfamily
SE95_RS22290	SM00490	helicase superfamily c-terminal domain
SE95_RS22340	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SE95_RS22340	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SE95_RS22340	SM00493	SE95_RS22340
SE95_RS22385	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS22385	SM01134	SE95_RS22385
SE95_RS22400	SM00482	DNA polymerase A domain
SE95_RS22470	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SE95_RS22480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS22500	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS22535	SM00422	helix_turn_helix, mercury resistance
SE95_RS22580	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22610	SM00905	Dihydroneopterin aldolase
SE95_RS22625	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22665	SM00421	helix_turn_helix, Lux Regulon
SE95_RS22665	SM00448	cheY-homologous receiver domain
SE95_RS22680	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS22755	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22755	SM01086	C-terminal, D2-small domain, of ClpB protein
SE95_RS22795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS22795	SM00387	Histidine kinase-like ATPases
SE95_RS22795	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS22800	SM00448	cheY-homologous receiver domain
SE95_RS22800	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS22815	SM00478	endonuclease III
SE95_RS22815	SM00525	SE95_RS22815
SE95_RS22825	SM00014	Acid phosphatase homologues
SE95_RS22850	SM00382	ATPases associated with a variety of cellular activities
SE95_RS22880	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS22880	SM00564	beta-propeller repeat
SE95_RS22970	SM00823	Phosphopantetheine attachment site
SE95_RS22975	SM00825	Beta-ketoacyl synthase
SE95_RS22985	SM00825	Beta-ketoacyl synthase
SE95_RS22990	SM00825	Beta-ketoacyl synthase
SE95_RS23000	SM00822	SE95_RS23000
SE95_RS23005	SM00822	SE95_RS23005
SE95_RS23010	SM00824	Thioesterase
SE95_RS23050	SM00014	Acid phosphatase homologues
SE95_RS23090	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23115	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS23130	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS23145	SM00822	SE95_RS23145
SE95_RS23200	SM00248	ankyrin repeats
SE95_RS23235	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23265	SM00450	Rhodanese Homology Domain
SE95_RS23290	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23295	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23300	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS23305	SM00354	helix_turn _helix lactose operon repressor
SE95_RS23315	SM00448	cheY-homologous receiver domain
SE95_RS23315	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS23320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS23320	SM00387	Histidine kinase-like ATPases
SE95_RS23320	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS23350	SM00880	SE95_RS23350
SE95_RS23360	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS23385	SM00855	Phosphoglycerate mutase family
SE95_RS23395	SM00387	Histidine kinase-like ATPases
SE95_RS23395	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS23400	SM00448	cheY-homologous receiver domain
SE95_RS23400	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS23415	SM01058	CarD-like/TRCF domain
SE95_RS23435	SM00840	SE95_RS23435
SE95_RS23440	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SE95_RS23460	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS23520	SM00866	SE95_RS23520
SE95_RS23540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS23540	SM00866	SE95_RS23540
SE95_RS23560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS23560	SM00866	SE95_RS23560
SE95_RS23595	SM00706	Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
SE95_RS23600	SM00226	Low molecular weight phosphatase family
SE95_RS23660	SM00829	Enoylreductase
SE95_RS23685	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS23700	SM00903	Flavin reductase like domain
SE95_RS23710	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS23710	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SE95_RS23710	SM00091	PAS domain
SE95_RS23710	SM00267	diguanylate cyclase
SE95_RS23780	SM00357	Cold shock protein domain
SE95_RS23840	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS23880	SM00487	DEAD-like helicases superfamily
SE95_RS23880	SM00490	helicase superfamily c-terminal domain
SE95_RS23900	SM00382	ATPases associated with a variety of cellular activities
SE95_RS23925	SM00357	Cold shock protein domain
SE95_RS23960	SM00387	Histidine kinase-like ATPases
SE95_RS23965	SM00960	Roadblock/LC7 domain
SE95_RS24010	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS24100	SM00878	Biotin carboxylase C-terminal domain
SE95_RS24135	SM00091	PAS domain
SE95_RS24145	SM00529	Helix-turn-helix diphteria tox regulatory element
SE95_RS24145	SM00899	SE95_RS24145
SE95_RS24175	SM00382	ATPases associated with a variety of cellular activities
SE95_RS24180	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SE95_RS24230	SM00421	helix_turn_helix, Lux Regulon
SE95_RS24230	SM00448	cheY-homologous receiver domain
SE95_RS24240	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS24255	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS24275	SM00830	Chorismate mutase type II
SE95_RS24290	SM01007	Class II Aldolase and Adducin N-terminal domain
SE95_RS24320	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS24330	SM00421	helix_turn_helix, Lux Regulon
SE95_RS24330	SM00448	cheY-homologous receiver domain
SE95_RS24395	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS24415	SM00644	SE95_RS24415
SE95_RS24490	SM00382	ATPases associated with a variety of cellular activities
SE95_RS24525	SM00881	CoA binding domain
SE95_RS24550	SM00798	AICARFT/IMPCHase bienzyme
SE95_RS24550	SM00851	MGS-like domain
SE95_RS24620	SM00382	ATPases associated with a variety of cellular activities
SE95_RS24665	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS24725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS24830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS24830	SM00895	SE95_RS24830
SE95_RS24850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS24850	SM00866	SE95_RS24850
SE95_RS24915	SM00382	ATPases associated with a variety of cellular activities
SE95_RS24935	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SE95_RS24980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS24980	SM00387	Histidine kinase-like ATPases
SE95_RS24980	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS24985	SM00448	cheY-homologous receiver domain
SE95_RS24985	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS25015	SM01133	SE95_RS25015
SE95_RS25035	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS25065	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS25065	SM01134	SE95_RS25065
SE95_RS25080	SM00878	Biotin carboxylase C-terminal domain
SE95_RS25130	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
SE95_RS25140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS25140	SM00267	diguanylate cyclase
SE95_RS25230	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS25240	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25270	SM00028	Tetratricopeptide repeats
SE95_RS25270	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25335	SM00829	Enoylreductase
SE95_RS25345	SM00422	helix_turn_helix, mercury resistance
SE95_RS25380	SM01119	SE95_RS25380
SE95_RS25390	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS25410	SM00636	SE95_RS25410
SE95_RS25420	SM00858	SE95_RS25420
SE95_RS25500	SM00670	Large family of predicted nucleotide-binding domains
SE95_RS25540	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25555	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25565	SM00244	prohibitin homologues
SE95_RS25575	SM01060	SE95_RS25575
SE95_RS25580	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS25690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS25690	SM00866	SE95_RS25690
SE95_RS25715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS25715	SM00091	PAS domain
SE95_RS25715	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS25770	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25775	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25780	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25785	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25830	SM00382	ATPases associated with a variety of cellular activities
SE95_RS25845	SM00421	helix_turn_helix, Lux Regulon
SE95_RS25845	SM00448	cheY-homologous receiver domain
SE95_RS25850	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS25935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SE95_RS25960	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS25960	SM00924	MgtE intracellular N domain
SE95_RS25995	SM00481	DNA polymerase alpha chain like domain
SE95_RS26020	SM00481	DNA polymerase alpha chain like domain
SE95_RS26040	SM00487	DEAD-like helicases superfamily
SE95_RS26040	SM00490	helicase superfamily c-terminal domain
SE95_RS26095	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26120	SM00450	Rhodanese Homology Domain
SE95_RS26170	SM00341	Helicase and RNase D C-terminal
SE95_RS26260	SM00671	Sel1-like repeats.
SE95_RS26280	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26290	SM01060	SE95_RS26290
SE95_RS26295	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS26350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS26405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS26405	SM00866	SE95_RS26405
SE95_RS26445	SM00387	Histidine kinase-like ATPases
SE95_RS26455	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SE95_RS26500	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS26550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS26550	SM00895	SE95_RS26550
SE95_RS26600	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26610	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS26615	SM00919	Malic enzyme, NAD binding domain
SE95_RS26615	SM01274	SE95_RS26615
SE95_RS26620	SM00829	Enoylreductase
SE95_RS26660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS26660	SM00387	Histidine kinase-like ATPases
SE95_RS26660	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS26665	SM00448	cheY-homologous receiver domain
SE95_RS26665	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS26685	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26685	SM00464	Found in ATP-dependent protease La (LON)
SE95_RS26690	SM00641	Glycosyl hydrolases family 25
SE95_RS26695	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS26695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS26705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS26705	SM00387	Histidine kinase-like ATPases
SE95_RS26710	SM00960	Roadblock/LC7 domain
SE95_RS26765	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS26770	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26805	SM00836	DALR anticodon binding domain
SE95_RS26805	SM01016	Arginyl tRNA synthetase N terminal dom
SE95_RS26830	SM00357	Cold shock protein domain
SE95_RS26830	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26830	SM00959	Rho termination factor, N-terminal domain
SE95_RS26845	SM00937	SE95_RS26845
SE95_RS26860	SM00226	Low molecular weight phosphatase family
SE95_RS26910	SM00382	ATPases associated with a variety of cellular activities
SE95_RS26930	SM00822	SE95_RS26930
SE95_RS26930	SM00823	Phosphopantetheine attachment site
SE95_RS26930	SM00825	Beta-ketoacyl synthase
SE95_RS26930	SM00826	SE95_RS26930
SE95_RS26940	SM00822	SE95_RS26940
SE95_RS26940	SM00823	Phosphopantetheine attachment site
SE95_RS26940	SM00825	Beta-ketoacyl synthase
SE95_RS26940	SM00826	SE95_RS26940
SE95_RS26940	SM01294	SE95_RS26940
SE95_RS26945	SM00823	Phosphopantetheine attachment site
SE95_RS26955	SM00823	Phosphopantetheine attachment site
SE95_RS26955	SM00825	Beta-ketoacyl synthase
SE95_RS26960	SM00822	SE95_RS26960
SE95_RS26960	SM00823	Phosphopantetheine attachment site
SE95_RS26960	SM00825	Beta-ketoacyl synthase
SE95_RS26960	SM00826	SE95_RS26960
SE95_RS26960	SM01294	SE95_RS26960
SE95_RS26965	SM00822	SE95_RS26965
SE95_RS26965	SM00823	Phosphopantetheine attachment site
SE95_RS26965	SM00825	Beta-ketoacyl synthase
SE95_RS26965	SM00826	SE95_RS26965
SE95_RS26965	SM01294	SE95_RS26965
SE95_RS26970	SM00823	Phosphopantetheine attachment site
SE95_RS26970	SM00825	Beta-ketoacyl synthase
SE95_RS26970	SM00826	SE95_RS26970
SE95_RS26970	SM01294	SE95_RS26970
SE95_RS26975	SM00823	Phosphopantetheine attachment site
SE95_RS26985	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS27000	SM00829	Enoylreductase
SE95_RS27015	SM00421	helix_turn_helix, Lux Regulon
SE95_RS27015	SM00448	cheY-homologous receiver domain
SE95_RS27075	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27085	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27115	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS27145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS27155	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS27170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS27170	SM00387	Histidine kinase-like ATPases
SE95_RS27170	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS27175	SM00448	cheY-homologous receiver domain
SE95_RS27175	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS27245	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27250	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS27255	SM00448	cheY-homologous receiver domain
SE95_RS27260	SM00387	Histidine kinase-like ATPases
SE95_RS27270	SM00642	Alpha-amylase domain
SE95_RS27280	SM00642	Alpha-amylase domain
SE95_RS27285	SM00642	Alpha-amylase domain
SE95_RS27295	SM00736	Dystroglycan-type cadherin-like domains.
SE95_RS27300	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27305	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27310	SM00642	Alpha-amylase domain
SE95_RS27360	SM00641	Glycosyl hydrolases family 25
SE95_RS27370	SM00448	cheY-homologous receiver domain
SE95_RS27370	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS27375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS27375	SM00387	Histidine kinase-like ATPases
SE95_RS27375	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS27395	SM00014	Acid phosphatase homologues
SE95_RS27400	SM00014	Acid phosphatase homologues
SE95_RS27470	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27475	SM00382	ATPases associated with a variety of cellular activities
SE95_RS27500	SM00644	SE95_RS27500
SE95_RS27515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SE95_RS27525	SM00822	SE95_RS27525
SE95_RS27530	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS27545	SM00292	breast cancer carboxy-terminal domain
SE95_RS27545	SM00532	Ligase N family
SE95_RS27550	SM00052	Putative diguanylate phosphodiesterase
SE95_RS27550	SM00267	diguanylate cyclase
SE95_RS27570	SM00845	GatB domain
SE95_RS27590	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS27620	SM00421	helix_turn_helix, Lux Regulon
SE95_RS27645	SM00052	Putative diguanylate phosphodiesterase
SE95_RS27645	SM00091	PAS domain
SE95_RS27645	SM00267	diguanylate cyclase
SE95_RS27710	SM01329	SE95_RS27710
SE95_RS27750	SM00917	LeuA allosteric (dimerisation) domain
SE95_RS27755	SM00867	YceI-like domain 
SE95_RS27780	SM01120	SE95_RS27780
SE95_RS27795	SM00960	Roadblock/LC7 domain
SE95_RS27800	SM00387	Histidine kinase-like ATPases
SE95_RS27815	SM00960	Roadblock/LC7 domain
SE95_RS27820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS27820	SM00387	Histidine kinase-like ATPases
SE95_RS27875	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS27895	SM00411	bacterial (prokaryotic) histone like domain
SE95_RS27910	SM00563	Phosphate acyltransferases
SE95_RS27950	SM01120	SE95_RS27950
SE95_RS27950	SM01121	SE95_RS27950
SE95_RS27955	SM00487	DEAD-like helicases superfamily
SE95_RS27955	SM00490	helicase superfamily c-terminal domain
SE95_RS27985	SM00358	Double-stranded RNA binding motif
SE95_RS27985	SM00535	Ribonuclease III family
SE95_RS27990	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SE95_RS27990	SM01232	SE95_RS27990
SE95_RS28010	SM00968	SMC proteins Flexible Hinge Domain
SE95_RS28020	SM00248	ankyrin repeats
SE95_RS28040	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28040	SM00962	SRP54-type protein, GTPase domain
SE95_RS28040	SM00963	SRP54-type protein, helical bundle domain
SE95_RS28045	SM00943	Bifunctional DNA primase/polymerase, N-terminal
SE95_RS28060	SM00938	Nitrogen regulatory protein P-II
SE95_RS28065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS28070	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28070	SM00962	SRP54-type protein, GTPase domain
SE95_RS28070	SM00963	SRP54-type protein, helical bundle domain
SE95_RS28145	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28210	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28215	SM00421	helix_turn_helix, Lux Regulon
SE95_RS28215	SM00448	cheY-homologous receiver domain
SE95_RS28235	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS28250	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28260	SM00344	helix_turn_helix ASNC type
SE95_RS28300	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SE95_RS28415	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS28450	SM00904	Riboflavin kinase
SE95_RS28550	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28560	SM01387	SE95_RS28560
SE95_RS28565	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS28565	SM00322	K homology RNA-binding domain
SE95_RS28600	SM01130	SE95_RS28600
SE95_RS28605	SM00849	Metallo-beta-lactamase superfamily
SE95_RS28640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS28640	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS28645	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS28645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS28645	SM00387	Histidine kinase-like ATPases
SE95_RS28645	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS28645	SM00448	cheY-homologous receiver domain
SE95_RS28650	SM00448	cheY-homologous receiver domain
SE95_RS28655	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28655	SM00843	SE95_RS28655
SE95_RS28665	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS28680	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS28695	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SE95_RS28695	SM01232	SE95_RS28695
SE95_RS28700	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28700	SM00487	DEAD-like helicases superfamily
SE95_RS28700	SM00490	helicase superfamily c-terminal domain
SE95_RS28705	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS28750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS28775	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28785	SM00450	Rhodanese Homology Domain
SE95_RS28810	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS28810	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SE95_RS28815	SM00382	ATPases associated with a variety of cellular activities
SE95_RS28820	SM00448	cheY-homologous receiver domain
SE95_RS28820	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS28825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS28825	SM00387	Histidine kinase-like ATPases
SE95_RS28825	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS28845	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS28875	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS28875	SM00954	Region found in RelA / SpoT proteins
SE95_RS28905	SM01006	Siderophore biosynthesis protein domain
SE95_RS28915	SM00487	DEAD-like helicases superfamily
SE95_RS28915	SM00491	SE95_RS28915
SE95_RS28950	SM00855	Phosphoglycerate mutase family
SE95_RS28975	SM00487	DEAD-like helicases superfamily
SE95_RS28975	SM00490	helicase superfamily c-terminal domain
SE95_RS28995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS28995	SM00895	SE95_RS28995
SE95_RS29005	SM00020	Trypsin-like serine protease
SE95_RS29015	SM00387	Histidine kinase-like ATPases
SE95_RS29015	SM00433	TopoisomeraseII
SE95_RS29030	SM00421	helix_turn_helix, Lux Regulon
SE95_RS29030	SM00448	cheY-homologous receiver domain
SE95_RS29040	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SE95_RS29045	SM00434	DNA Topoisomerase IV
SE95_RS29065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS29065	SM00895	SE95_RS29065
SE95_RS29075	SM00881	CoA binding domain
SE95_RS29100	SM00450	Rhodanese Homology Domain
SE95_RS29135	SM00448	cheY-homologous receiver domain
SE95_RS29135	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS29140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS29140	SM00387	Histidine kinase-like ATPases
SE95_RS29140	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS29205	SM00387	Histidine kinase-like ATPases
SE95_RS29205	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS29210	SM00448	cheY-homologous receiver domain
SE95_RS29210	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS29250	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29255	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29260	SM00487	DEAD-like helicases superfamily
SE95_RS29260	SM00490	helicase superfamily c-terminal domain
SE95_RS29315	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS29355	SM00028	Tetratricopeptide repeats
SE95_RS29355	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29360	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS29445	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS29450	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29530	SM00829	Enoylreductase
SE95_RS29590	SM00923	MbtH-like protein
SE95_RS29595	SM00823	Phosphopantetheine attachment site
SE95_RS29595	SM01294	SE95_RS29595
SE95_RS29605	SM00823	Phosphopantetheine attachment site
SE95_RS29605	SM01294	SE95_RS29605
SE95_RS29670	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SE95_RS29685	SM00825	Beta-ketoacyl synthase
SE95_RS29710	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS29725	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS29760	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
SE95_RS29770	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS29800	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29810	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS29830	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS29840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS29900	SM00382	ATPases associated with a variety of cellular activities
SE95_RS29910	SM00861	Transketolase, pyrimidine binding domain
SE95_RS29935	SM00341	Helicase and RNase D C-terminal
SE95_RS29935	SM00474	3'-5' exonuclease
SE95_RS29940	SM00421	helix_turn_helix, Lux Regulon
SE95_RS30035	SM00382	ATPases associated with a variety of cellular activities
SE95_RS30070	SM00382	ATPases associated with a variety of cellular activities
SE95_RS30080	SM00387	Histidine kinase-like ATPases
SE95_RS30085	SM00421	helix_turn_helix, Lux Regulon
SE95_RS30085	SM00448	cheY-homologous receiver domain
SE95_RS30100	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS30135	SM00642	Alpha-amylase domain
SE95_RS30140	SM00240	Forkhead associated domain
SE95_RS30145	SM00642	Alpha-amylase domain
SE95_RS30155	SM00642	Alpha-amylase domain
SE95_RS30165	SM00479	SE95_RS30165
SE95_RS30205	SM00382	ATPases associated with a variety of cellular activities
SE95_RS30275	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS30300	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS30335	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SE95_RS30340	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS30390	SM00240	Forkhead associated domain
SE95_RS30390	SM00382	ATPases associated with a variety of cellular activities
SE95_RS30405	SM00267	diguanylate cyclase
SE95_RS30440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS30440	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS30445	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS30465	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS30470	SM00422	helix_turn_helix, mercury resistance
SE95_RS30475	SM00422	helix_turn_helix, mercury resistance
SE95_RS30520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS30520	SM00895	SE95_RS30520
SE95_RS30540	SM01092	CO dehydrogenase flavoprotein C-terminal domain
SE95_RS30550	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
SE95_RS30565	SM00831	Cation transporter/ATPase, N-terminus
SE95_RS30575	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS30660	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS30695	SM01060	SE95_RS30695
SE95_RS30800	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS30835	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS30860	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS30875	SM00822	SE95_RS30875
SE95_RS30880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS30880	SM00866	SE95_RS30880
SE95_RS30895	SM00382	ATPases associated with a variety of cellular activities
SE95_RS30990	SM01101	SE95_RS30990
SE95_RS31225	SM00947	Carbonic anhydrase
SE95_RS31230	SM00662	RNA polymerases D
SE95_RS31255	SM00255	Toll - interleukin 1 - resistance
SE95_RS31275	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS31300	SM01192	SE95_RS31300
SE95_RS31300	SM01193	SE95_RS31300
SE95_RS31320	SM00382	ATPases associated with a variety of cellular activities
SE95_RS31330	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS31330	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS31335	SM00534	ATPase domain of DNA mismatch repair MUTS family
SE95_RS31340	SM00534	ATPase domain of DNA mismatch repair MUTS family
SE95_RS31345	SM00382	ATPases associated with a variety of cellular activities
SE95_RS31385	SM01192	SE95_RS31385
SE95_RS31385	SM01193	SE95_RS31385
SE95_RS31390	SM00855	Phosphoglycerate mutase family
SE95_RS31410	SM00014	Acid phosphatase homologues
SE95_RS31435	SM00014	Acid phosphatase homologues
SE95_RS31465	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS31475	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS31615	SM00382	ATPases associated with a variety of cellular activities
SE95_RS31755	SM01209	SE95_RS31755
SE95_RS31790	SM00357	Cold shock protein domain
SE95_RS31955	SM00421	helix_turn_helix, Lux Regulon
SE95_RS32000	SM00849	Metallo-beta-lactamase superfamily
SE95_RS32020	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS32035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS32090	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS32180	SM00506	Appr-1"-p processing enzyme
SE95_RS32185	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS32185	SM00478	endonuclease III
SE95_RS32185	SM01009	AlkA N-terminal domain
SE95_RS32250	SM00829	Enoylreductase
SE95_RS32265	SM00567	E-Z type HEAT repeats
SE95_RS32275	SM00822	SE95_RS32275
SE95_RS32280	SM00422	helix_turn_helix, mercury resistance
SE95_RS32310	SM00642	Alpha-amylase domain
SE95_RS32330	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS32385	SM00829	Enoylreductase
SE95_RS32400	SM00014	Acid phosphatase homologues
SE95_RS32400	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SE95_RS32445	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS32515	SM00282	Laminin G domain
SE95_RS32515	SM00560	LamG-like jellyroll fold domain
SE95_RS32520	SM00829	Enoylreductase
SE95_RS32525	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS32535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS32535	SM00895	SE95_RS32535
SE95_RS32540	SM00830	Chorismate mutase type II
SE95_RS32555	SM00881	CoA binding domain
SE95_RS32600	SM00382	ATPases associated with a variety of cellular activities
SE95_RS32625	SM00421	helix_turn_helix, Lux Regulon
SE95_RS32625	SM00448	cheY-homologous receiver domain
SE95_RS32670	SM00382	ATPases associated with a variety of cellular activities
SE95_RS32685	SM00448	cheY-homologous receiver domain
SE95_RS32685	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS32690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS32690	SM00387	Histidine kinase-like ATPases
SE95_RS32690	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS32720	SM00448	cheY-homologous receiver domain
SE95_RS32720	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS32740	SM00825	Beta-ketoacyl synthase
SE95_RS32745	SM00825	Beta-ketoacyl synthase
SE95_RS32750	SM00823	Phosphopantetheine attachment site
SE95_RS32900	SM00960	Roadblock/LC7 domain
SE95_RS32905	SM00387	Histidine kinase-like ATPases
SE95_RS32910	SM00849	Metallo-beta-lactamase superfamily
SE95_RS32950	SM00344	helix_turn_helix ASNC type
SE95_RS32970	SM00829	Enoylreductase
SE95_RS32990	SM00421	helix_turn_helix, Lux Regulon
SE95_RS32990	SM00448	cheY-homologous receiver domain
SE95_RS33005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS33020	SM00354	helix_turn _helix lactose operon repressor
SE95_RS33025	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS33045	SM01240	SE95_RS33045
SE95_RS33050	SM00998	Adenylosuccinate lyase C-terminus
SE95_RS33055	SM00788	Adenylosuccinate synthetase
SE95_RS33075	SM00421	helix_turn_helix, Lux Regulon
SE95_RS33140	SM01209	SE95_RS33140
SE95_RS33155	SM00421	helix_turn_helix, Lux Regulon
SE95_RS33165	SM00091	PAS domain
SE95_RS33165	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS33185	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS33205	SM00849	Metallo-beta-lactamase superfamily
SE95_RS33210	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS33270	SM00382	ATPases associated with a variety of cellular activities
SE95_RS33280	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS33330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS33330	SM00387	Histidine kinase-like ATPases
SE95_RS33330	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS33335	SM00448	cheY-homologous receiver domain
SE95_RS33335	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS33370	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS33395	SM00822	SE95_RS33395
SE95_RS33400	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS33400	SM01134	SE95_RS33400
SE95_RS33475	SM00422	helix_turn_helix, mercury resistance
SE95_RS33490	SM00506	Appr-1"-p processing enzyme
SE95_RS33540	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS33545	SM00631	SE95_RS33545
SE95_RS33570	SM00316	Ribosomal protein S1-like RNA-binding domain
SE95_RS33570	SM00732	Likely ribonuclease with RNase H fold.
SE95_RS33580	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS33595	SM00382	ATPases associated with a variety of cellular activities
SE95_RS33650	SM00382	ATPases associated with a variety of cellular activities
SE95_RS33710	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS33730	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS33775	SM00387	Histidine kinase-like ATPases
SE95_RS33780	SM00960	Roadblock/LC7 domain
SE95_RS33795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS33900	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS33905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS33905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
SE95_RS33905	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS33910	SM01230	SE95_RS33910
SE95_RS33940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS33940	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS33990	SM00257	Lysin motif
SE95_RS34005	SM00028	Tetratricopeptide repeats
SE95_RS34055	SM00854	Bacterial capsule synthesis protein PGA_cap
SE95_RS34080	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34085	SM00054	EF-hand, calcium binding motif
SE95_RS34105	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS34135	SM00091	PAS domain
SE95_RS34135	SM00421	helix_turn_helix, Lux Regulon
SE95_RS34160	SM00148	Phospholipase C, catalytic domain (part); domain X
SE95_RS34200	SM00636	SE95_RS34200
SE95_RS34205	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS34210	SM00829	Enoylreductase
SE95_RS34260	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34265	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34275	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS34275	SM01134	SE95_RS34275
SE95_RS34295	SM00855	Phosphoglycerate mutase family
SE95_RS34325	SM00644	SE95_RS34325
SE95_RS34330	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS34335	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS34355	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34365	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS34375	SM00867	YceI-like domain 
SE95_RS34385	SM00487	DEAD-like helicases superfamily
SE95_RS34385	SM00490	helicase superfamily c-terminal domain
SE95_RS34430	SM00960	Roadblock/LC7 domain
SE95_RS34455	SM00487	DEAD-like helicases superfamily
SE95_RS34455	SM00490	helicase superfamily c-terminal domain
SE95_RS34465	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34490	SM00632	SE95_RS34490
SE95_RS34490	SM00642	Alpha-amylase domain
SE95_RS34500	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS34505	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS34560	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS34565	SM00382	ATPases associated with a variety of cellular activities
SE95_RS34595	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS34640	SM00636	SE95_RS34640
SE95_RS34685	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS34705	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS34705	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SE95_RS34725	SM00344	helix_turn_helix ASNC type
SE95_RS34735	SM01217	SE95_RS34735
SE95_RS34815	SM00986	Uracil DNA glycosylase superfamily
SE95_RS34815	SM00987	UreE urease accessory protein, C-terminal domain 
SE95_RS34830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS34860	SM00421	helix_turn_helix, Lux Regulon
SE95_RS34865	SM00642	Alpha-amylase domain
SE95_RS34875	SM01266	SE95_RS34875
SE95_RS34900	SM00822	SE95_RS34900
SE95_RS34945	SM00823	Phosphopantetheine attachment site
SE95_RS34980	SM00354	helix_turn _helix lactose operon repressor
SE95_RS35020	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SE95_RS35020	SM00481	DNA polymerase alpha chain like domain
SE95_RS35020	SM00483	DNA polymerase X family
SE95_RS35045	SM00382	ATPases associated with a variety of cellular activities
SE95_RS35050	SM00382	ATPases associated with a variety of cellular activities
SE95_RS35075	SM00421	helix_turn_helix, Lux Regulon
SE95_RS35075	SM00448	cheY-homologous receiver domain
SE95_RS35165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS35165	SM00387	Histidine kinase-like ATPases
SE95_RS35165	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS35170	SM00448	cheY-homologous receiver domain
SE95_RS35170	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS35205	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS35205	SM00564	beta-propeller repeat
SE95_RS35220	SM00422	helix_turn_helix, mercury resistance
SE95_RS35265	SM00636	SE95_RS35265
SE95_RS35295	SM00344	helix_turn_helix ASNC type
SE95_RS35340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS35360	SM00363	S4 RNA-binding domain
SE95_RS35365	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
SE95_RS35380	SM00357	Cold shock protein domain
SE95_RS35405	SM00872	Alpha mannosidase, middle domain
SE95_RS35430	SM00354	helix_turn _helix lactose operon repressor
SE95_RS35450	SM00421	helix_turn_helix, Lux Regulon
SE95_RS35450	SM00448	cheY-homologous receiver domain
SE95_RS35460	SM00641	Glycosyl hydrolases family 25
SE95_RS35485	SM00825	Beta-ketoacyl synthase
SE95_RS35495	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS35505	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS35590	SM00960	Roadblock/LC7 domain
SE95_RS35650	SM00881	CoA binding domain
SE95_RS35715	SM00560	LamG-like jellyroll fold domain
SE95_RS35730	SM00344	helix_turn_helix ASNC type
SE95_RS35760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS35760	SM00866	SE95_RS35760
SE95_RS35775	SM00986	Uracil DNA glycosylase superfamily
SE95_RS35775	SM00987	UreE urease accessory protein, C-terminal domain 
SE95_RS35780	SM00998	Adenylosuccinate lyase C-terminus
SE95_RS35805	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS35810	SM01091	Transporter associated domain
SE95_RS35850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS35850	SM00895	SE95_RS35850
SE95_RS35890	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS35890	SM00876	Biotin and Thiamin Synthesis associated domain
SE95_RS35940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS35945	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS36085	SM00960	Roadblock/LC7 domain
SE95_RS36210	SM00448	cheY-homologous receiver domain
SE95_RS36210	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS36215	SM00387	Histidine kinase-like ATPases
SE95_RS36215	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS36235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS36235	SM00387	Histidine kinase-like ATPases
SE95_RS36235	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS36255	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS36255	SM00478	endonuclease III
SE95_RS36255	SM01009	AlkA N-terminal domain
SE95_RS36355	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS36400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS36410	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS36440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS36440	SM00091	PAS domain
SE95_RS36440	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS36455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS36455	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS36460	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS36460	SM01134	SE95_RS36460
SE95_RS36485	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS36550	SM00422	helix_turn_helix, mercury resistance
SE95_RS36620	SM00903	Flavin reductase like domain
SE95_RS36670	SM00421	helix_turn_helix, Lux Regulon
SE95_RS36705	SM00882	Coenzyme A transferase
SE95_RS36710	SM00882	Coenzyme A transferase
SE95_RS36720	SM00822	SE95_RS36720
SE95_RS36725	SM00822	SE95_RS36725
SE95_RS36735	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SE95_RS36760	SM00346	helix_turn_helix isocitrate lyase regulation
SE95_RS36780	SM00903	Flavin reductase like domain
SE95_RS36845	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS36845	SM00091	PAS domain
SE95_RS36845	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS36850	SM00986	Uracil DNA glycosylase superfamily
SE95_RS36850	SM00987	UreE urease accessory protein, C-terminal domain 
SE95_RS36855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SE95_RS36855	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS36880	SM01209	SE95_RS36880
SE95_RS36940	SM00054	EF-hand, calcium binding motif
SE95_RS36960	SM00829	Enoylreductase
SE95_RS37000	SM00831	Cation transporter/ATPase, N-terminus
SE95_RS37005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS37015	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS37020	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS37030	SM00327	von Willebrand factor (vWF) type A domain
SE95_RS37055	SM00450	Rhodanese Homology Domain
SE95_RS37105	SM00450	Rhodanese Homology Domain
SE95_RS37110	SM00062	Bacterial periplasmic substrate-binding proteins
SE95_RS37115	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37140	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS37165	SM00822	SE95_RS37165
SE95_RS37175	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS37215	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37245	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS37245	SM01260	SE95_RS37245
SE95_RS37255	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37260	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37265	SM00421	helix_turn_helix, Lux Regulon
SE95_RS37295	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS37295	SM00564	beta-propeller repeat
SE95_RS37300	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS37325	SM00458	Ricin-type beta-trefoil
SE95_RS37410	SM00825	Beta-ketoacyl synthase
SE95_RS37440	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37465	SM00829	Enoylreductase
SE95_RS37475	SM00382	ATPases associated with a variety of cellular activities
SE95_RS37515	SM00947	Carbonic anhydrase
SE95_RS37540	SM00829	Enoylreductase
SE95_RS37580	SM00822	SE95_RS37580
SE95_RS37585	SM00996	S-adenosyl-L-homocysteine hydrolase
SE95_RS37585	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SE95_RS37595	SM01018	B12 binding domain
SE95_RS37615	SM00387	Histidine kinase-like ATPases
SE95_RS37620	SM00421	helix_turn_helix, Lux Regulon
SE95_RS37620	SM00448	cheY-homologous receiver domain
SE95_RS37640	SM01329	SE95_RS37640
SE95_RS37700	SM00822	SE95_RS37700
SE95_RS37740	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS37745	SM00421	helix_turn_helix, Lux Regulon
SE95_RS37745	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS37745	SM01043	Bacterial transcriptional activator domain
SE95_RS37755	SM01110	SE95_RS37755
SE95_RS37790	SM00829	Enoylreductase
SE95_RS37880	SM00860	SMI1 / KNR4 family
SE95_RS37890	SM00860	SMI1 / KNR4 family
SE95_RS37940	SM00244	prohibitin homologues
SE95_RS37995	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS38070	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS38080	SM00421	helix_turn_helix, Lux Regulon
SE95_RS38080	SM00448	cheY-homologous receiver domain
SE95_RS38125	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SE95_RS38135	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS38175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SE95_RS38185	SM00382	ATPases associated with a variety of cellular activities
SE95_RS38205	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS38225	SM00495	Chitin-binding domain type 3
SE95_RS38265	SM00829	Enoylreductase
SE95_RS38270	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS38270	SM01134	SE95_RS38270
SE95_RS38335	SM00387	Histidine kinase-like ATPases
SE95_RS38335	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS38445	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS38465	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS38555	SM00644	SE95_RS38555
SE95_RS38560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SE95_RS38560	SM00387	Histidine kinase-like ATPases
SE95_RS38560	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS38565	SM00098	Alkaline phosphatase homologues
SE95_RS38595	SM00889	Elongation factor G, domain IV
SE95_RS38605	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS38665	SM00382	ATPases associated with a variety of cellular activities
SE95_RS38675	SM00382	ATPases associated with a variety of cellular activities
SE95_RS38750	SM00823	Phosphopantetheine attachment site
SE95_RS38790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SE95_RS38790	SM00895	SE95_RS38790
SE95_RS38800	SM00822	SE95_RS38800
SE95_RS38835	SM00382	ATPases associated with a variety of cellular activities
SE95_RS38840	SM00382	ATPases associated with a variety of cellular activities
SE95_RS38930	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS38960	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS38980	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS39000	SM01130	SE95_RS39000
SE95_RS39060	SM00382	ATPases associated with a variety of cellular activities
SE95_RS39065	SM00382	ATPases associated with a variety of cellular activities
SE95_RS39075	SM00822	SE95_RS39075
SE95_RS39075	SM00823	Phosphopantetheine attachment site
SE95_RS39075	SM00825	Beta-ketoacyl synthase
SE95_RS39075	SM00826	SE95_RS39075
SE95_RS39075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39075	SM01294	SE95_RS39075
SE95_RS39080	SM00822	SE95_RS39080
SE95_RS39080	SM00823	Phosphopantetheine attachment site
SE95_RS39080	SM00825	Beta-ketoacyl synthase
SE95_RS39080	SM00826	SE95_RS39080
SE95_RS39080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39080	SM00829	Enoylreductase
SE95_RS39080	SM01294	SE95_RS39080
SE95_RS39085	SM00822	SE95_RS39085
SE95_RS39085	SM00823	Phosphopantetheine attachment site
SE95_RS39085	SM00824	Thioesterase
SE95_RS39085	SM00825	Beta-ketoacyl synthase
SE95_RS39085	SM00826	SE95_RS39085
SE95_RS39085	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39115	SM00823	Phosphopantetheine attachment site
SE95_RS39115	SM00825	Beta-ketoacyl synthase
SE95_RS39115	SM00826	SE95_RS39115
SE95_RS39115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39115	SM01294	SE95_RS39115
SE95_RS39120	SM00822	SE95_RS39120
SE95_RS39120	SM00823	Phosphopantetheine attachment site
SE95_RS39120	SM00825	Beta-ketoacyl synthase
SE95_RS39120	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39120	SM01294	SE95_RS39120
SE95_RS39125	SM00822	SE95_RS39125
SE95_RS39125	SM00823	Phosphopantetheine attachment site
SE95_RS39125	SM00825	Beta-ketoacyl synthase
SE95_RS39125	SM00826	SE95_RS39125
SE95_RS39125	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39125	SM00829	Enoylreductase
SE95_RS39125	SM01294	SE95_RS39125
SE95_RS39130	SM00824	Thioesterase
SE95_RS39135	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39140	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39145	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39150	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39155	SM00420	helix_turn_helix, Deoxyribose operon repressor
SE95_RS39155	SM01134	SE95_RS39155
SE95_RS39160	SM00344	helix_turn_helix ASNC type
SE95_RS39210	SM00823	Phosphopantetheine attachment site
SE95_RS39250	SM00100	Cyclic nucleotide-monophosphate binding domain
SE95_RS39265	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS39285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SE95_RS39290	SM00947	Carbonic anhydrase
SE95_RS39310	SM00116	Domain in cystathionine beta-synthase and other proteins.
SE95_RS39315	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS39345	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
SE95_RS39415	SM01119	SE95_RS39415
SE95_RS39455	SM00729	Elongator protein 3, MiaB family, Radical SAM
SE95_RS39465	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
SE95_RS39475	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39515	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS39540	SM00382	ATPases associated with a variety of cellular activities
SE95_RS39600	SM00448	cheY-homologous receiver domain
SE95_RS39600	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS39605	SM00387	Histidine kinase-like ATPases
SE95_RS39605	SM00388	His Kinase A (phosphoacceptor) domain
SE95_RS39635	SM00947	Carbonic anhydrase
SE95_RS39660	SM00320	WD40 repeats
SE95_RS39685	SM00823	Phosphopantetheine attachment site
SE95_RS39690	SM00822	SE95_RS39690
SE95_RS39690	SM00823	Phosphopantetheine attachment site
SE95_RS39690	SM00825	Beta-ketoacyl synthase
SE95_RS39690	SM00826	SE95_RS39690
SE95_RS39690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SE95_RS39720	SM00849	Metallo-beta-lactamase superfamily
SE95_RS39735	SM00822	SE95_RS39735
SE95_RS39765	SM00220	Serine/Threonine protein kinases, catalytic domain
SE95_RS39765	SM00564	beta-propeller repeat
SE95_RS39870	SM00020	Trypsin-like serine protease
SE95_RS39935	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS39935	SM01043	Bacterial transcriptional activator domain
SE95_RS39945	SM00421	helix_turn_helix, Lux Regulon
SE95_RS39945	SM00448	cheY-homologous receiver domain
SE95_RS39955	SM00382	ATPases associated with a variety of cellular activities
SE95_RS39975	SM00829	Enoylreductase
SE95_RS39985	SM00248	ankyrin repeats
SE95_RS40000	SM00331	Sigma factor PP2C-like phosphatases
SE95_RS40010	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS40015	SM00829	Enoylreductase
SE95_RS40065	SM00028	Tetratricopeptide repeats
SE95_RS40065	SM00862	Transcriptional regulatory protein, C terminal
SE95_RS40065	SM01043	Bacterial transcriptional activator domain
SE95_RS40070	SM00822	SE95_RS40070
SE95_RS40110	SM00347	helix_turn_helix multiple antibiotic resistance protein
SE95_RS40130	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS40140	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS40185	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS40185	SM01009	AlkA N-terminal domain
SE95_RS40245	SM00320	WD40 repeats
SE95_RS40340	SM00342	helix_turn_helix, arabinose operon control protein
SE95_RS40345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SE95_RS40420	SM00382	ATPases associated with a variety of cellular activities
SE95_RS40445	SM00530	Helix-turn-helix XRE-family like proteins 
SE95_RS40475	SM00823	Phosphopantetheine attachment site
SE95_RS40580	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
SE95_RS40640	SM00530	Helix-turn-helix XRE-family like proteins 
