locus-tag	class	description
CD934_RS00010	COG2423	ornithine cyclodeaminase activity
CD934_RS00055	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CD934_RS00085	COG1846	Transcriptional regulator
CD934_RS00090	COG2409	Drug exporters of the RND superfamily
CD934_RS00100	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CD934_RS00120	COG4977	sequence-specific DNA binding
CD934_RS00130	COG2353	YceI-like domain
CD934_RS00135	COG3940	Belongs to the glycosyl hydrolase 43 family
CD934_RS00140	COG0531	amino acid
CD934_RS00150	COG0832	Belongs to the urease beta subunit family
CD934_RS00150	COG0831	urea catabolic process
CD934_RS00155	COG0804	urea catabolic process
CD934_RS00165	COG0477	Major facilitator Superfamily
CD934_RS00195	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS00220	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CD934_RS00240	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CD934_RS00290	COG0488	(ABC) transporter
CD934_RS00310	COG0714	Associated with various cellular activities
CD934_RS00335	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CD934_RS00360	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CD934_RS00375	COG0395	ABC-type sugar transport system, permease component
CD934_RS00380	COG1175	transmembrane transport
CD934_RS00395	COG1609	Transcriptional regulator
CD934_RS00400	COG1609	Transcriptional regulator
CD934_RS00405	COG1879	ABC-type sugar transport system periplasmic component
CD934_RS00410	COG1129	ABC transporter
CD934_RS00415	COG1172	Belongs to the binding-protein-dependent transport system permease family
CD934_RS00420	COG1172	Belongs to the binding-protein-dependent transport system permease family
CD934_RS00450	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CD934_RS00455	COG0702	epimerase
CD934_RS00470	COG3386	PFAM SMP-30 Gluconolaconase
CD934_RS00500	COG4941	Belongs to the sigma-70 factor family
CD934_RS00505	COG3795	YCII-related domain
CD934_RS00525	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CD934_RS00540	COG2259	Doxx family
CD934_RS00550	COG1733	regulation of RNA biosynthetic process
CD934_RS00555	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CD934_RS00560	COG2197	response regulator
CD934_RS00605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS00615	COG3962	Belongs to the TPP enzyme family
CD934_RS00630	COG2814	Major facilitator Superfamily
CD934_RS00635	COG0673	inositol 2-dehydrogenase activity
CD934_RS00640	COG1082	Xylose isomerase domain protein TIM barrel
CD934_RS00680	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CD934_RS00705	COG3321	synthase
CD934_RS00705	COG0604	alcohol dehydrogenase
CD934_RS00720	COG3321	synthase
CD934_RS00720	COG0604	alcohol dehydrogenase
CD934_RS00725	COG0604	alcohol dehydrogenase
CD934_RS00725	COG3321	synthase
CD934_RS00745	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CD934_RS00750	COG0300	oxidoreductase activity
CD934_RS00775	COG0494	nUDIX hydrolase
CD934_RS00790	COG0475	glutathione-regulated potassium exporter activity
CD934_RS00805	COG3903	Transcriptional regulator
CD934_RS00805	COG3629	intracellular signal transduction
CD934_RS00815	COG0477	Major facilitator Superfamily
CD934_RS00825	COG3119	arylsulfatase activity
CD934_RS00835	COG1368	sulfuric ester hydrolase activity
CD934_RS00855	COG1073	alpha beta
CD934_RS00855	COG2226	methyltransferase
CD934_RS00865	COG0187	DNA topoisomerase II activity
CD934_RS00875	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CD934_RS00885	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CD934_RS00895	COG1216	Glycosyl transferase, family 2
CD934_RS00910	COG0395	ABC-type sugar transport system, permease component
CD934_RS00950	COG3629	intracellular signal transduction
CD934_RS01035	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CD934_RS01035	COG1263	PTS System
CD934_RS01095	COG2318	DinB family
CD934_RS01120	COG0789	Transcriptional regulator
CD934_RS01140	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS01145	COG1953	Uracil, thiamine, allantoin
CD934_RS01165	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CD934_RS01185	COG1120	ATPase activity
CD934_RS01190	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS01195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS01200	COG1132	(ABC) transporter
CD934_RS01220	COG2272	Belongs to the type-B carboxylesterase lipase family
CD934_RS01235	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CD934_RS01250	COG1357	PFAM Pentapeptide repeats (8 copies)
CD934_RS01325	COG3250	beta-galactosidase activity
CD934_RS01385	COG1597	lipid kinase activity
CD934_RS01390	COG0277	FAD linked oxidase domain protein
CD934_RS01450	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CD934_RS01455	COG0395	ABC-type sugar transport system, permease component
CD934_RS01460	COG1175	transmembrane transport
CD934_RS01480	COG0596	Alpha beta hydrolase
CD934_RS01555	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
CD934_RS01575	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS01640	COG3397	chitin binding
CD934_RS01650	COG0456	acetyltransferase
CD934_RS01655	COG1295	ribonuclease BN
CD934_RS01665	COG2264	protein methyltransferase activity
CD934_RS01680	COG1063	alcohol dehydrogenase
CD934_RS01700	COG1846	Transcriptional regulator
CD934_RS01720	COG3540	Alkaline phosphatase
CD934_RS01750	COG2124	cytochrome p450
CD934_RS01760	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CD934_RS01765	COG2192	nodulation
CD934_RS01780	COG0438	transferase activity, transferring glycosyl groups
CD934_RS01785	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CD934_RS01790	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CD934_RS01790	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CD934_RS01815	COG0753	catalase activity
CD934_RS01830	COG0009	L-threonylcarbamoyladenylate synthase
CD934_RS01840	COG0656	L-ascorbic acid biosynthetic process
CD934_RS01845	COG3285	dna ligase
CD934_RS01845	COG1793	dna ligase
CD934_RS01865	COG2207	Transcriptional regulator
CD934_RS01870	COG2223	nitrite transmembrane transporter activity
CD934_RS01880	COG3285	dna ligase
CD934_RS01880	COG1793	dna ligase
CD934_RS01890	COG0181	hydroxymethylbilane synthase activity
CD934_RS01930	COG0366	Alpha amylase catalytic
CD934_RS01945	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CD934_RS01950	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CD934_RS01980	COG2205	protein histidine kinase activity
CD934_RS01980	COG3850	Histidine kinase
CD934_RS01980	COG3437	response regulator, receiver
CD934_RS01980	COG4999	Histidine kinase
CD934_RS01995	COG1366	Belongs to the anti-sigma-factor antagonist family
CD934_RS02000	COG1366	Belongs to the anti-sigma-factor antagonist family
CD934_RS02005	COG2172	sigma factor antagonist activity
CD934_RS02020	COG1252	NADH dehydrogenase
CD934_RS02055	COG1982	Orn Lys Arg decarboxylase major
CD934_RS02065	COG0477	Major facilitator Superfamily
CD934_RS02110	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CD934_RS02130	COG3852	Histidine kinase
CD934_RS02140	COG2340	Cysteine-rich secretory protein family
CD934_RS02155	COG0515	serine threonine protein kinase
CD934_RS02165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS02180	COG0667	Aldo Keto reductase
CD934_RS02185	COG0328	RNA-DNA hybrid ribonuclease activity
CD934_RS02195	COG0740	serine-type endopeptidase activity
CD934_RS02200	COG0740	serine-type endopeptidase activity
CD934_RS02205	COG1396	sequence-specific DNA binding
CD934_RS02210	COG1191	sigma factor activity
CD934_RS02240	COG0667	Aldo Keto reductase
CD934_RS02245	COG0583	DNA-binding transcription factor activity
CD934_RS02255	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CD934_RS02260	COG0346	lactoylglutathione lyase activity
CD934_RS02275	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS02285	COG0431	NADPH-dependent FMN reductase
CD934_RS02295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS02305	COG0583	DNA-binding transcription factor activity
CD934_RS02315	COG0702	epimerase
CD934_RS02385	COG0589	response to stress
CD934_RS02405	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CD934_RS02415	COG0515	serine threonine protein kinase
CD934_RS02490	COG1309	transcriptional regulator
CD934_RS02495	COG0667	Aldo Keto reductase
CD934_RS02570	COG2376	Dihydroxyacetone kinase
CD934_RS02575	COG1461	Dihydroxyacetone kinase
CD934_RS02605	COG1902	pentaerythritol trinitrate reductase activity
CD934_RS02605	COG0446	pyridine nucleotide-disulphide oxidoreductase
CD934_RS02630	COG2890	protein-(glutamine-N5) methyltransferase activity
CD934_RS02640	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CD934_RS02650	COG3458	cephalosporin-C deacetylase activity
CD934_RS02655	COG2188	Transcriptional regulator
CD934_RS02660	COG2226	methyltransferase
CD934_RS02665	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CD934_RS02670	COG1686	Belongs to the peptidase S11 family
CD934_RS02685	COG2186	Transcriptional regulator
CD934_RS02700	COG0346	lactoylglutathione lyase activity
CD934_RS02705	COG0640	Transcriptional regulator
CD934_RS02725	COG1175	transmembrane transport
CD934_RS02730	COG0395	ABC-type sugar transport system, permease component
CD934_RS02790	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS02820	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS02850	COG2197	response regulator
CD934_RS02900	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CD934_RS02905	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CD934_RS02910	COG2186	Transcriptional regulator
CD934_RS02915	COG0673	inositol 2-dehydrogenase activity
CD934_RS02920	COG1609	Transcriptional regulator
CD934_RS02935	COG0673	inositol 2-dehydrogenase activity
CD934_RS02950	COG0673	inositol 2-dehydrogenase activity
CD934_RS02975	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS02985	COG3718	enzyme involved in inositol metabolism
CD934_RS02990	COG3962	Belongs to the TPP enzyme family
CD934_RS02995	COG2188	Transcriptional regulator
CD934_RS03005	COG0494	nUDIX hydrolase
CD934_RS03060	COG2828	Protein conserved in bacteria
CD934_RS03075	COG0183	Belongs to the thiolase family
CD934_RS03135	COG3959	Transketolase, thiamine diphosphate binding domain
CD934_RS03140	COG3958	Transketolase
CD934_RS03165	COG0583	DNA-binding transcription factor activity
CD934_RS03175	COG1063	alcohol dehydrogenase
CD934_RS03205	COG4106	trans-aconitate 2-methyltransferase activity
CD934_RS03215	COG0508	dehydrogenase complex catalyzes the overall conversion of
CD934_RS03215	COG0596	Alpha beta hydrolase
CD934_RS03230	COG2755	lipolytic protein G-D-S-L family
CD934_RS03245	COG2365	Tyrosine phosphatase family
CD934_RS03265	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CD934_RS03270	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CD934_RS03285	COG1657	PFAM Prenyltransferase squalene oxidase
CD934_RS03295	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CD934_RS03305	COG1562	ergosterol biosynthetic process
CD934_RS03310	COG1134	teichoic acid transport
CD934_RS03310	COG1388	LysM domain
CD934_RS03350	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CD934_RS03365	COG1024	Enoyl-CoA hydratase
CD934_RS03375	COG4977	sequence-specific DNA binding
CD934_RS03380	COG2183	response to ionizing radiation
CD934_RS03385	COG0488	(ABC) transporter
CD934_RS03400	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CD934_RS03410	COG2936	dipeptidyl-peptidase activity
CD934_RS03420	COG1113	amino acid transport
CD934_RS03430	COG1250	3-hydroxyacyl-CoA dehydrogenase
CD934_RS03430	COG1024	Enoyl-CoA hydratase
CD934_RS03435	COG0183	Belongs to the thiolase family
CD934_RS03440	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CD934_RS03445	COG3268	Saccharopine dehydrogenase
CD934_RS03455	COG1515	deoxyribonuclease V activity
CD934_RS03480	COG0488	(ABC) transporter
CD934_RS03485	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CD934_RS03490	COG1834	amidinotransferase
CD934_RS03550	COG1793	dna ligase
CD934_RS03560	COG1470	cell adhesion involved in biofilm formation
CD934_RS03565	COG1846	Transcriptional regulator
CD934_RS03580	COG3485	protocatechuate 3,4-dioxygenase
CD934_RS03585	COG3485	protocatechuate 3,4-dioxygenase
CD934_RS03595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CD934_RS03600	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CD934_RS03600	COG1672	PFAM Archaeal ATPase
CD934_RS03625	COG3511	phospholipase C
CD934_RS03635	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS03640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS03645	COG1126	abc transporter atp-binding protein
CD934_RS03650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS03655	COG0765	amino acid transport
CD934_RS03680	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CD934_RS03700	COG0366	Alpha amylase catalytic
CD934_RS03705	COG0395	ABC-type sugar transport system, permease component
CD934_RS03710	COG1175	transmembrane transport
CD934_RS03730	COG3938	Belongs to the proline racemase family
CD934_RS03735	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS03780	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CD934_RS03790	COG1486	melibiose metabolic process
CD934_RS03795	COG4585	Histidine kinase
CD934_RS03800	COG2197	response regulator
CD934_RS03805	COG2409	Drug exporters of the RND superfamily
CD934_RS03820	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CD934_RS03825	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CD934_RS03840	COG0166	Belongs to the GPI family
CD934_RS03845	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CD934_RS03850	COG0406	alpha-ribazole phosphatase activity
CD934_RS03855	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CD934_RS03855	COG1082	Xylose isomerase domain protein TIM barrel
CD934_RS03860	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CD934_RS03870	COG0477	Major facilitator Superfamily
CD934_RS03875	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CD934_RS03880	COG3467	pyridoxamine 5'-phosphate
CD934_RS03890	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CD934_RS03910	COG0297	glycogen (starch) synthase activity
CD934_RS03940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS03945	COG0747	negative chemotaxis
CD934_RS03950	COG1214	PFAM Peptidase M22, glycoprotease
CD934_RS03950	COG0456	acetyltransferase
CD934_RS04005	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CD934_RS04005	COG5479	isomerase activity
CD934_RS04030	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CD934_RS04035	COG0714	Associated with various cellular activities
CD934_RS04045	COG2273	Hydrolase Family 16
CD934_RS04050	COG2723	6-phospho-beta-galactosidase activity
CD934_RS04055	COG0395	ABC-type sugar transport system, permease component
CD934_RS04060	COG1175	transmembrane transport
CD934_RS04065	COG2182	Extracellular solute-binding protein
CD934_RS04115	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CD934_RS04120	COG0477	Major facilitator Superfamily
CD934_RS04130	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS04140	COG0045	succinate-CoA ligase (ADP-forming) activity
CD934_RS04150	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CD934_RS04160	COG2223	nitrite transmembrane transporter activity
CD934_RS04220	COG1879	ABC-type sugar transport system periplasmic component
CD934_RS04225	COG1172	Belongs to the binding-protein-dependent transport system permease family
CD934_RS04230	COG1129	ABC transporter
CD934_RS04235	COG1940	carbohydrate kinase activity
CD934_RS04245	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CD934_RS04255	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CD934_RS04260	COG3383	formate dehydrogenase (NAD+) activity
CD934_RS04275	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CD934_RS04285	COG0583	DNA-binding transcription factor activity
CD934_RS04305	COG5297	Belongs to the glycosyl hydrolase family 6
CD934_RS04310	COG4733	cellulase activity
CD934_RS04310	COG5297	Belongs to the glycosyl hydrolase family 6
CD934_RS04325	COG3401	FG-GAP repeat protein
CD934_RS04330	COG2226	methyltransferase
CD934_RS04335	COG2154	pterin-4-alpha-carbinolamine dehydratase
CD934_RS04360	COG0443	Heat shock 70 kDa protein
CD934_RS04425	COG0693	protein deglycase activity
CD934_RS04440	COG0488	(ABC) transporter
CD934_RS04445	COG2226	methyltransferase
CD934_RS04495	COG3285	dna ligase
CD934_RS04495	COG1793	dna ligase
CD934_RS04510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS04515	COG4948	Mandelate Racemase Muconate Lactonizing
CD934_RS04530	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CD934_RS04535	COG1619	proteins homologs of microcin C7 resistance protein MccF
CD934_RS04545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS04550	COG2362	D-Aminopeptidase
CD934_RS04565	COG0477	Major facilitator Superfamily
CD934_RS04600	COG1250	3-hydroxyacyl-CoA dehydrogenase
CD934_RS04610	COG0604	alcohol dehydrogenase
CD934_RS04615	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS04615	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS04630	COG1960	acyl-CoA dehydrogenase activity
CD934_RS04635	COG0688	phosphatidylethanolamine metabolic process
CD934_RS04650	COG1929	Belongs to the glycerate kinase type-1 family
CD934_RS04690	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CD934_RS04710	COG0640	Transcriptional regulator
CD934_RS04725	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CD934_RS04735	COG0483	inositol monophosphate 1-phosphatase activity
CD934_RS04745	COG1609	Transcriptional regulator
CD934_RS04755	COG0395	ABC-type sugar transport system, permease component
CD934_RS04760	COG1175	transmembrane transport
CD934_RS04770	COG1621	beta-fructofuranosidase activity
CD934_RS04785	COG1120	ATPase activity
CD934_RS04790	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS04795	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS04815	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CD934_RS04820	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CD934_RS04835	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS04860	COG1953	Uracil, thiamine, allantoin
CD934_RS04870	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CD934_RS04885	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CD934_RS04925	COG1132	(ABC) transporter
CD934_RS04930	COG0542	response to heat
CD934_RS04935	COG0405	Gamma-glutamyltransferase
CD934_RS04945	COG1126	abc transporter atp-binding protein
CD934_RS04965	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CD934_RS04980	COG3345	alpha-galactosidase
CD934_RS05030	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CD934_RS05040	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CD934_RS05045	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CD934_RS05060	COG2188	Transcriptional regulator
CD934_RS05070	COG0366	Alpha amylase catalytic
CD934_RS05080	COG0438	transferase activity, transferring glycosyl groups
CD934_RS05095	COG0662	Cupin 2, conserved barrel domain protein
CD934_RS05095	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CD934_RS05115	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS05120	COG0546	phosphoglycolate phosphatase activity
CD934_RS05135	COG0823	Involved in the tonB-independent uptake of proteins
CD934_RS05145	COG3507	Belongs to the glycosyl hydrolase 43 family
CD934_RS05180	COG0142	geranyltranstransferase activity
CD934_RS05210	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CD934_RS05220	COG1940	carbohydrate kinase activity
CD934_RS05240	COG2188	Transcriptional regulator
CD934_RS05245	COG0673	inositol 2-dehydrogenase activity
CD934_RS05255	COG2197	response regulator
CD934_RS05280	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS05285	COG4266	Belongs to the allantoicase family
CD934_RS05290	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CD934_RS05295	COG1414	Transcriptional regulator
CD934_RS05315	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CD934_RS05345	COG4264	IucA IucC family
CD934_RS05350	COG2304	oxidoreductase activity
CD934_RS05365	COG0436	Aminotransferase
CD934_RS05420	COG2233	PERMEase
CD934_RS05435	COG2351	hydroxyisourate hydrolase activity
CD934_RS05470	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CD934_RS05500	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CD934_RS05520	COG3622	Belongs to the hyi family
CD934_RS05525	COG2084	Dehydrogenase
CD934_RS05530	COG0753	catalase activity
CD934_RS05550	COG3960	tartronate-semialdehyde synthase activity
CD934_RS05565	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS05570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CD934_RS05575	COG2197	response regulator
CD934_RS05610	COG3415	Transposase
CD934_RS05610	COG2801	Transposase and inactivated derivatives
CD934_RS05625	COG0859	PFAM glycosyl transferase family 9
CD934_RS05630	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CD934_RS05630	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CD934_RS05635	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CD934_RS05640	COG0297	glycogen (starch) synthase activity
CD934_RS05690	COG2252	PERMEase
CD934_RS05695	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CD934_RS05710	COG3835	regulator
CD934_RS05720	COG1802	Transcriptional regulator
CD934_RS05750	COG0028	Belongs to the TPP enzyme family
CD934_RS05765	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CD934_RS05775	COG1162	GTPase activity
CD934_RS05790	COG0662	Cupin 2, conserved barrel domain protein
CD934_RS05805	COG0277	FAD linked oxidase domain protein
CD934_RS05870	COG2040	homocysteine
CD934_RS05895	COG2318	DinB family
CD934_RS05935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS05945	COG0583	DNA-binding transcription factor activity
CD934_RS05950	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS05995	COG1917	Cupin 2, conserved barrel domain protein
CD934_RS05995	COG4977	sequence-specific DNA binding
CD934_RS06010	COG1960	acyl-CoA dehydrogenase activity
CD934_RS06040	COG0175	sulfate reduction
CD934_RS06045	COG0529	Catalyzes the synthesis of activated sulfate
CD934_RS06065	COG1116	anion transmembrane transporter activity
CD934_RS06070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CD934_RS06110	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CD934_RS06210	COG1404	Belongs to the peptidase S8 family
CD934_RS06245	COG1174	glycine betaine transport
CD934_RS06250	COG1174	glycine betaine transport
CD934_RS06280	COG0745	RESPONSE REGULATOR receiver
CD934_RS06285	COG2205	protein histidine kinase activity
CD934_RS06290	COG0644	oxidoreductase
CD934_RS06300	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CD934_RS06305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CD934_RS06335	COG0330	HflC and HflK could
CD934_RS06355	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CD934_RS06355	COG0723	plastoquinol--plastocyanin reductase activity
CD934_RS06400	COG0443	Heat shock 70 kDa protein
CD934_RS06445	COG3220	belongs to the UPF0276 family
CD934_RS06460	COG3253	May function as heme-dependent peroxidase
CD934_RS06475	COG0446	pyridine nucleotide-disulphide oxidoreductase
CD934_RS06495	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CD934_RS06510	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CD934_RS06520	COG1175	transmembrane transport
CD934_RS06530	COG3250	beta-galactosidase activity
CD934_RS06535	COG1609	Transcriptional regulator
CD934_RS06540	COG0183	Belongs to the thiolase family
CD934_RS06545	COG1250	3-hydroxyacyl-CoA dehydrogenase
CD934_RS06545	COG1024	Enoyl-CoA hydratase
CD934_RS06560	COG2089	acid synthase
CD934_RS06580	COG1215	transferase activity, transferring glycosyl groups
CD934_RS06595	COG0531	amino acid
CD934_RS06600	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CD934_RS06605	COG4214	carbohydrate transport
CD934_RS06615	COG4213	ABC transporter substrate-binding protein
CD934_RS06620	COG1940	carbohydrate kinase activity
CD934_RS06625	COG0395	ABC-type sugar transport system, permease component
CD934_RS06630	COG1175	transmembrane transport
CD934_RS06635	COG1653	transport
CD934_RS06665	COG0395	ABC-type sugar transport system, permease component
CD934_RS06670	COG4209	transmembrane transport
CD934_RS06675	COG3458	cephalosporin-C deacetylase activity
CD934_RS06690	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CD934_RS06700	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CD934_RS06705	COG0300	oxidoreductase activity
CD934_RS06710	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS06715	COG2197	response regulator
CD934_RS06720	COG4585	Histidine kinase
CD934_RS06735	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CD934_RS06750	COG0515	serine threonine protein kinase
CD934_RS06765	COG1653	transport
CD934_RS06780	COG3903	Transcriptional regulator
CD934_RS06780	COG3629	intracellular signal transduction
CD934_RS06800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CD934_RS06810	COG4585	Histidine kinase
CD934_RS06870	COG4585	Histidine kinase
CD934_RS06880	COG4106	trans-aconitate 2-methyltransferase activity
CD934_RS06885	COG1124	(ABC) transporter
CD934_RS06890	COG0444	Belongs to the ABC transporter superfamily
CD934_RS06895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS06900	COG0601	transmembrane transport
CD934_RS06910	COG0310	cobalt ion transport
CD934_RS06925	COG1122	ATPase activity
CD934_RS06930	COG2255	four-way junction helicase activity
CD934_RS06985	COG1024	Enoyl-CoA hydratase
CD934_RS06995	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CD934_RS07000	COG2235	arginine
CD934_RS07015	COG0475	glutathione-regulated potassium exporter activity
CD934_RS07025	COG2255	four-way junction helicase activity
CD934_RS07035	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CD934_RS07070	COG1799	cell septum assembly
CD934_RS07080	COG1472	Belongs to the glycosyl hydrolase 3 family
CD934_RS07085	COG0395	ABC-type sugar transport system, permease component
CD934_RS07090	COG1175	transmembrane transport
CD934_RS07095	COG2182	Extracellular solute-binding protein
CD934_RS07100	COG2188	Transcriptional regulator
CD934_RS07120	COG1914	H( )-stimulated, divalent metal cation uptake system
CD934_RS07135	COG0667	Aldo Keto reductase
CD934_RS07145	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CD934_RS07150	COG1349	DNA-binding transcription factor activity
CD934_RS07190	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CD934_RS07195	COG1942	4-Oxalocrotonate Tautomerase
CD934_RS07200	COG1132	(ABC) transporter
CD934_RS07205	COG1132	(ABC) transporter
CD934_RS07205	COG2375	cellular response to nickel ion
CD934_RS07220	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CD934_RS07230	COG1021	2,3-dihydroxybenzoate-AMP ligase
CD934_RS07240	COG0402	S-adenosylhomocysteine deaminase activity
CD934_RS07245	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS07260	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CD934_RS07265	COG4566	intracellular signal transduction
CD934_RS07280	COG0604	alcohol dehydrogenase
CD934_RS07280	COG3321	synthase
CD934_RS07290	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CD934_RS07290	COG2070	2-Nitropropane dioxygenase
CD934_RS07300	COG1960	acyl-CoA dehydrogenase activity
CD934_RS07310	COG0493	'glutamate synthase
CD934_RS07330	COG4585	Histidine kinase
CD934_RS07335	COG2197	response regulator
CD934_RS07350	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CD934_RS07385	COG0175	sulfate reduction
CD934_RS07390	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CD934_RS07390	COG0674	pyruvate-flavodoxin oxidoreductase activity
CD934_RS07395	COG1013	pyruvate-flavodoxin oxidoreductase activity
CD934_RS07400	COG2186	Transcriptional regulator
CD934_RS07405	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CD934_RS07410	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CD934_RS07415	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CD934_RS07460	COG1674	ftsk spoiiie
CD934_RS07470	COG0464	growth
CD934_RS07500	COG1733	regulation of RNA biosynthetic process
CD934_RS07555	COG1609	Transcriptional regulator
CD934_RS07575	COG0366	Alpha amylase catalytic
CD934_RS07585	COG0583	DNA-binding transcription factor activity
CD934_RS07590	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CD934_RS07595	COG1609	Transcriptional regulator
CD934_RS07610	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CD934_RS07615	COG4221	oxidoreductase activity
CD934_RS07625	COG0477	Major facilitator Superfamily
CD934_RS07635	COG0785	Cytochrome C biogenesis protein
CD934_RS07640	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CD934_RS07640	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CD934_RS07660	COG1063	alcohol dehydrogenase
CD934_RS07690	COG1595	DNA-templated transcription, initiation
CD934_RS07705	COG1846	Transcriptional regulator
CD934_RS07705	COG1940	carbohydrate kinase activity
CD934_RS07735	COG0726	polysaccharide deacetylase
CD934_RS07760	COG3654	unkown
CD934_RS07800	COG2018	Roadblock/LC7 domain
CD934_RS07815	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CD934_RS07825	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CD934_RS07830	COG0531	amino acid
CD934_RS07835	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS07840	COG0569	domain protein
CD934_RS07870	COG1136	(ABC) transporter
CD934_RS07885	COG0756	dUTP diphosphatase activity
CD934_RS07910	COG2205	protein histidine kinase activity
CD934_RS07915	COG0745	RESPONSE REGULATOR receiver
CD934_RS07920	COG0483	inositol monophosphate 1-phosphatase activity
CD934_RS07925	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CD934_RS07955	COG0210	DNA helicase
CD934_RS07965	COG0384	phenazine biosynthesis protein PhzF
CD934_RS07970	COG1435	thymidine kinase activity
CD934_RS08000	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CD934_RS08005	COG1802	Transcriptional regulator
CD934_RS08020	COG0612	Peptidase, M16
CD934_RS08025	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CD934_RS08035	COG0372	Belongs to the citrate synthase family
CD934_RS08050	COG3290	protein histidine kinase activity
CD934_RS08055	COG4565	transcriptional regulatory protein
CD934_RS08060	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CD934_RS08070	COG0187	DNA topoisomerase II activity
CD934_RS08085	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CD934_RS08090	COG1802	Transcriptional regulator
CD934_RS08095	COG1131	(ABC) transporter
CD934_RS08110	COG0514	ATP-dependent DNA helicase (RecQ)
CD934_RS08125	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CD934_RS08145	COG0588	phosphoglycerate mutase activity
CD934_RS08160	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CD934_RS08165	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CD934_RS08170	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CD934_RS08200	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CD934_RS08210	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CD934_RS08215	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CD934_RS08225	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CD934_RS08245	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CD934_RS08255	COG2358	TRAP transporter, solute receptor (TAXI family
CD934_RS08260	COG0642	Histidine kinase
CD934_RS08265	COG0745	RESPONSE REGULATOR receiver
CD934_RS08270	COG1126	abc transporter atp-binding protein
CD934_RS08275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS08280	COG0765	amino acid transport
CD934_RS08285	COG0765	amino acid transport
CD934_RS08325	COG1131	(ABC) transporter
CD934_RS08335	COG0628	permease
CD934_RS08365	COG1201	RNA secondary structure unwinding
CD934_RS08370	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CD934_RS08380	COG0783	Belongs to the Dps family
CD934_RS08385	COG1396	sequence-specific DNA binding
CD934_RS08390	COG1058	Belongs to the CinA family
CD934_RS08390	COG1546	Belongs to the CinA family
CD934_RS08400	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CD934_RS08410	COG1674	ftsk spoiiie
CD934_RS08420	COG0784	Response regulator, receiver
CD934_RS08420	COG2205	protein histidine kinase activity
CD934_RS08430	COG2208	phosphoserine phosphatase activity
CD934_RS08430	COG2770	Histidine kinase
CD934_RS08450	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CD934_RS08455	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS08460	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
CD934_RS08480	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CD934_RS08485	COG0612	Peptidase, M16
CD934_RS08490	COG1185	polyribonucleotide nucleotidyltransferase activity
CD934_RS08495	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CD934_RS08505	COG1674	ftsk spoiiie
CD934_RS08520	COG1404	Belongs to the peptidase S8 family
CD934_RS08575	COG1404	Belongs to the peptidase S8 family
CD934_RS08595	COG0455	bacterial-type flagellum organization
CD934_RS08600	COG0747	negative chemotaxis
CD934_RS08605	COG0601	transmembrane transport
CD934_RS08615	COG0444	Belongs to the ABC transporter superfamily
CD934_RS08635	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CD934_RS08640	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CD934_RS08665	COG0779	Required for maturation of 30S ribosomal subunits
CD934_RS08685	COG0442	prolyl-tRNA aminoacylation
CD934_RS08700	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CD934_RS08705	COG0750	zinc metalloprotease
CD934_RS08710	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CD934_RS08750	COG0395	ABC-type sugar transport system, permease component
CD934_RS08755	COG4209	transmembrane transport
CD934_RS08770	COG1472	Belongs to the glycosyl hydrolase 3 family
CD934_RS08775	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS08785	COG2508	Transcriptional regulator
CD934_RS08810	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CD934_RS08815	COG1177	transmembrane transport
CD934_RS08820	COG1176	ABC-type spermidine putrescine transport system, permease component I
CD934_RS08825	COG3842	ATPase activity
CD934_RS08850	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CD934_RS08855	COG0584	glycerophosphoryl diester phosphodiesterase
CD934_RS08865	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS08875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CD934_RS08880	COG1136	(ABC) transporter
CD934_RS08910	COG3842	ATPase activity
CD934_RS08915	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CD934_RS08925	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CD934_RS08955	COG0575	Belongs to the CDS family
CD934_RS08960	COG0233	cytoplasmic translational termination
CD934_RS08965	COG0528	UMP kinase activity
CD934_RS08975	COG0052	Belongs to the universal ribosomal protein uS2 family
CD934_RS08980	COG4942	peptidase
CD934_RS08990	COG1191	sigma factor activity
CD934_RS09040	COG3800	Transcriptional regulator
CD934_RS09040	COG1396	sequence-specific DNA binding
CD934_RS09050	COG3800	Transcriptional regulator
CD934_RS09050	COG1396	sequence-specific DNA binding
CD934_RS09095	COG0792	nuclease activity
CD934_RS09115	COG0681	Belongs to the peptidase S26 family
CD934_RS09125	COG0681	Belongs to the peptidase S26 family
CD934_RS09130	COG0335	large ribosomal subunit rRNA binding
CD934_RS09135	COG0336	Belongs to the RNA methyltransferase TrmD family
CD934_RS09140	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CD934_RS09145	COG1837	Belongs to the UPF0109 family
CD934_RS09150	COG0228	four-way junction DNA binding
CD934_RS09170	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CD934_RS09200	COG0477	Major facilitator Superfamily
CD934_RS09205	COG1196	nuclear chromosome segregation
CD934_RS09215	COG1254	Belongs to the acylphosphatase family
CD934_RS09220	COG2340	Cysteine-rich secretory protein family
CD934_RS09225	COG0655	NAD(P)H dehydrogenase (quinone) activity
CD934_RS09230	COG1733	regulation of RNA biosynthetic process
CD934_RS09235	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CD934_RS09240	COG0571	ribonuclease III activity
CD934_RS09245	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CD934_RS09260	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CD934_RS09265	COG0742	ribosomal rna small subunit methyltransferase
CD934_RS09275	COG1461	Dihydroxyacetone kinase
CD934_RS09280	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CD934_RS09285	COG0351	phosphomethylpyrimidine kinase
CD934_RS09305	COG1181	Belongs to the D-alanine--D-alanine ligase family
CD934_RS09310	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CD934_RS09320	COG1920	GTP binding
CD934_RS09330	COG0776	regulation of translation
CD934_RS09340	COG0066	3-isopropylmalate dehydratase activity
CD934_RS09345	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CD934_RS09350	COG1414	Transcriptional regulator
CD934_RS09385	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CD934_RS09390	COG0179	Fumarylacetoacetate (FAA) hydrolase
CD934_RS09400	COG5002	protein histidine kinase activity
CD934_RS09405	COG2018	Roadblock/LC7 domain
CD934_RS09425	COG2018	Roadblock/LC7 domain
CD934_RS09445	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CD934_RS09450	COG5492	domain, Protein
CD934_RS09455	COG2226	methyltransferase
CD934_RS09460	COG0300	oxidoreductase activity
CD934_RS09465	COG1032	radical SAM domain protein
CD934_RS09470	COG0697	spore germination
CD934_RS09475	COG0438	transferase activity, transferring glycosyl groups
CD934_RS09490	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CD934_RS09500	COG2957	Belongs to the agmatine deiminase family
CD934_RS09505	COG0804	urea catabolic process
CD934_RS09510	COG0831	urea catabolic process
CD934_RS09510	COG0832	Belongs to the urease beta subunit family
CD934_RS09515	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CD934_RS09520	COG0473	3-isopropylmalate dehydrogenase activity
CD934_RS09530	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS09535	COG0506	proline dehydrogenase activity
CD934_RS09550	COG0477	Major facilitator Superfamily
CD934_RS09555	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CD934_RS09560	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CD934_RS09565	COG0440	acetolactate synthase activity
CD934_RS09575	COG5001	Diguanylate cyclase
CD934_RS09585	COG0656	L-ascorbic acid biosynthetic process
CD934_RS09590	COG2133	pyrroloquinoline quinone binding
CD934_RS09600	COG2197	response regulator
CD934_RS09610	COG4608	Belongs to the ABC transporter superfamily
CD934_RS09615	COG0444	Belongs to the ABC transporter superfamily
CD934_RS09620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS09625	COG0601	transmembrane transport
CD934_RS09630	COG0747	negative chemotaxis
CD934_RS09635	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CD934_RS09640	COG4948	Mandelate Racemase Muconate Lactonizing
CD934_RS09645	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CD934_RS09650	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS09660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CD934_RS09665	COG2409	Drug exporters of the RND superfamily
CD934_RS09675	COG2226	methyltransferase
CD934_RS09680	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CD934_RS09690	COG0154	amidase activity
CD934_RS09695	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CD934_RS09705	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CD934_RS09715	COG4221	oxidoreductase activity
CD934_RS09720	COG1611	Belongs to the LOG family
CD934_RS09740	COG0482	sulfurtransferase activity
CD934_RS09780	COG2860	membrane
CD934_RS09790	COG0444	Belongs to the ABC transporter superfamily
CD934_RS09795	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS09800	COG0601	transmembrane transport
CD934_RS09805	COG4166	transmembrane transport
CD934_RS09825	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CD934_RS09830	COG0509	glycine decarboxylation via glycine cleavage system
CD934_RS09835	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CD934_RS09840	COG1760	l-serine dehydratase
CD934_RS09845	COG3409	Peptidoglycan-binding domain 1 protein
CD934_RS09845	COG3757	hydrolase, family 25
CD934_RS09895	COG1132	(ABC) transporter
CD934_RS09900	COG1132	(ABC) transporter
CD934_RS09905	COG1132	(ABC) transporter
CD934_RS09910	COG1132	(ABC) transporter
CD934_RS09925	COG0058	SHG alpha-glucan phosphorylase activity
CD934_RS09935	COG0366	Alpha amylase catalytic
CD934_RS09945	COG3281	Trehalose synthase
CD934_RS09950	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CD934_RS09970	COG1301	dicarboxylic acid transport
CD934_RS09975	COG3290	protein histidine kinase activity
CD934_RS09980	COG4565	transcriptional regulatory protein
CD934_RS09990	COG1175	transmembrane transport
CD934_RS09995	COG0395	ABC-type sugar transport system, permease component
CD934_RS10015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS10020	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CD934_RS10035	COG3251	PFAM MbtH domain protein
CD934_RS10045	COG3340	Belongs to the peptidase S51 family
CD934_RS10055	COG2197	response regulator
CD934_RS10080	COG2124	cytochrome p450
CD934_RS10095	COG0205	6-phosphofructokinase activity
CD934_RS10100	COG0857	belongs to the CobB CobQ family
CD934_RS10100	COG0280	phosphate acetyltransferase
CD934_RS10105	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CD934_RS10145	COG0583	DNA-binding transcription factor activity
CD934_RS10155	COG2855	membrane
CD934_RS10160	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS10160	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS10205	COG2205	protein histidine kinase activity
CD934_RS10210	COG0745	RESPONSE REGULATOR receiver
CD934_RS10225	COG0183	Belongs to the thiolase family
CD934_RS10280	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CD934_RS10295	COG1250	3-hydroxyacyl-CoA dehydrogenase
CD934_RS10320	COG4585	Histidine kinase
CD934_RS10325	COG2197	response regulator
CD934_RS10340	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CD934_RS10345	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CD934_RS10350	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CD934_RS10355	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CD934_RS10360	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CD934_RS10365	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CD934_RS10370	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CD934_RS10385	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CD934_RS10390	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CD934_RS10395	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CD934_RS10405	COG2890	protein-(glutamine-N5) methyltransferase activity
CD934_RS10410	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CD934_RS10415	COG0254	rRNA binding
CD934_RS10420	COG1316	TRANSCRIPTIONal
CD934_RS10430	COG0083	homoserine kinase activity
CD934_RS10435	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CD934_RS10440	COG0460	homoserine dehydrogenase
CD934_RS10445	COG0019	diaminopimelate decarboxylase activity
CD934_RS10450	COG0018	arginyl-trna synthetase
CD934_RS10455	COG0745	RESPONSE REGULATOR receiver
CD934_RS10465	COG1733	regulation of RNA biosynthetic process
CD934_RS10490	COG0789	Transcriptional regulator
CD934_RS10495	COG0659	secondary active sulfate transmembrane transporter activity
CD934_RS10515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CD934_RS10525	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CD934_RS10530	COG1793	dna ligase
CD934_RS10530	COG3285	dna ligase
CD934_RS10635	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CD934_RS10645	COG0745	RESPONSE REGULATOR receiver
CD934_RS10650	COG2205	protein histidine kinase activity
CD934_RS10655	COG0508	dehydrogenase complex catalyzes the overall conversion of
CD934_RS10655	COG0567	Dehydrogenase, E1 component
CD934_RS10690	COG0604	alcohol dehydrogenase
CD934_RS10695	COG0281	malic enzyme
CD934_RS10710	COG1126	abc transporter atp-binding protein
CD934_RS10715	COG4106	trans-aconitate 2-methyltransferase activity
CD934_RS10770	COG0142	geranyltranstransferase activity
CD934_RS10775	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CD934_RS10820	COG1597	lipid kinase activity
CD934_RS10835	COG1309	transcriptional regulator
CD934_RS10840	COG0363	glucosamine-6-phosphate deaminase activity
CD934_RS10845	COG2188	Transcriptional regulator
CD934_RS10870	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CD934_RS10875	COG2124	cytochrome p450
CD934_RS10885	COG0242	peptide deformylase activity
CD934_RS10900	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CD934_RS10900	COG2199	diguanylate cyclase activity
CD934_RS10905	COG5662	AntiSigma factor
CD934_RS10910	COG1595	DNA-templated transcription, initiation
CD934_RS10920	COG2135	peptidase activity
CD934_RS10930	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CD934_RS10945	COG1309	transcriptional regulator
CD934_RS10950	COG0483	inositol monophosphate 1-phosphatase activity
CD934_RS10960	COG0753	catalase activity
CD934_RS10970	COG3415	Transposase
CD934_RS10970	COG2801	Transposase and inactivated derivatives
CD934_RS10995	COG1615	UPF0182 protein
CD934_RS11005	COG3480	Lon protease (S16) C-terminal proteolytic domain
CD934_RS11055	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CD934_RS11095	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS11100	COG0210	DNA helicase
CD934_RS11125	COG0596	Alpha beta hydrolase
CD934_RS11190	COG0513	Belongs to the DEAD box helicase family
CD934_RS11195	COG0596	Alpha beta hydrolase
CD934_RS11200	COG1432	Conserved Protein
CD934_RS11210	COG2095	MarC family integral membrane protein
CD934_RS11215	COG0613	PHP domain protein
CD934_RS11225	COG2814	Major facilitator Superfamily
CD934_RS11235	COG0598	Magnesium transport protein CorA
CD934_RS11275	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CD934_RS11280	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CD934_RS11295	COG1595	DNA-templated transcription, initiation
CD934_RS11310	COG1024	Enoyl-CoA hydratase
CD934_RS11315	COG0519	Catalyzes the synthesis of GMP from XMP
CD934_RS11325	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CD934_RS11335	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS11380	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CD934_RS11395	COG4608	Belongs to the ABC transporter superfamily
CD934_RS11405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS11410	COG0601	transmembrane transport
CD934_RS11420	COG4608	Belongs to the ABC transporter superfamily
CD934_RS11425	COG0444	Belongs to the ABC transporter superfamily
CD934_RS11430	COG0601	transmembrane transport
CD934_RS11435	COG0747	negative chemotaxis
CD934_RS11440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CD934_RS11445	COG1217	gtp-binding protein TYPA
CD934_RS11465	COG1053	succinate dehydrogenase
CD934_RS11470	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CD934_RS11550	COG0739	heme binding
CD934_RS11550	COG0741	lytic transglycosylase activity
CD934_RS11550	COG1196	nuclear chromosome segregation
CD934_RS11585	COG0012	GTP binding
CD934_RS11595	COG1940	carbohydrate kinase activity
CD934_RS11600	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CD934_RS11605	COG1570	exodeoxyribonuclease VII activity
CD934_RS11610	COG1722	exodeoxyribonuclease VII activity
CD934_RS11615	COG0778	Nitroreductase
CD934_RS11640	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CD934_RS11640	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CD934_RS11650	COG0114	fumarate hydratase activity
CD934_RS11665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CD934_RS11685	COG1136	(ABC) transporter
CD934_RS11700	COG0450	alkyl hydroperoxide reductase
CD934_RS11705	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CD934_RS11720	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CD934_RS11725	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CD934_RS11745	COG2801	Transposase and inactivated derivatives
CD934_RS11745	COG3415	Transposase
CD934_RS11800	COG2319	Wd-40 repeat
CD934_RS11810	COG2319	Wd-40 repeat
CD934_RS11840	COG2197	response regulator
CD934_RS11845	COG3920	Histidine kinase
CD934_RS11875	COG2894	cell division
CD934_RS11905	COG2801	Transposase and inactivated derivatives
CD934_RS11905	COG3415	Transposase
CD934_RS11915	COG2610	gluconate transmembrane transporter activity
CD934_RS11920	COG0251	oxidation-reduction process
CD934_RS11925	COG1414	Transcriptional regulator
CD934_RS11940	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CD934_RS11950	COG0436	Aminotransferase
CD934_RS11980	COG0681	Belongs to the peptidase S26 family
CD934_RS11985	COG2267	carboxylic ester hydrolase activity
CD934_RS12045	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CD934_RS12070	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
CD934_RS12080	COG1309	transcriptional regulator
CD934_RS12090	COG1331	Highly conserved protein containing a thioredoxin domain
CD934_RS12130	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CD934_RS12140	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CD934_RS12145	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CD934_RS12150	COG2255	four-way junction helicase activity
CD934_RS12155	COG1595	DNA-templated transcription, initiation
CD934_RS12175	COG1064	alcohol dehydrogenase
CD934_RS12185	COG1404	Belongs to the peptidase S8 family
CD934_RS12205	COG2986	histidine ammonia-lyase
CD934_RS12215	COG1024	Enoyl-CoA hydratase
CD934_RS12225	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CD934_RS12230	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CD934_RS12230	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CD934_RS12235	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CD934_RS12245	COG0424	maF-like protein
CD934_RS12255	COG4770	biotin carboxylase activity
CD934_RS12280	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CD934_RS12295	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS12300	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS12315	COG1595	DNA-templated transcription, initiation
CD934_RS12320	COG0745	RESPONSE REGULATOR receiver
CD934_RS12325	COG2205	protein histidine kinase activity
CD934_RS12350	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CD934_RS12360	COG0583	DNA-binding transcription factor activity
CD934_RS12365	COG2814	Major facilitator Superfamily
CD934_RS12395	COG1079	Belongs to the binding-protein-dependent transport system permease family
CD934_RS12405	COG3845	ABC transporter
CD934_RS12410	COG1744	ABC transporter substrate-binding protein PnrA-like
CD934_RS12415	COG1744	ABC transporter substrate-binding protein PnrA-like
CD934_RS12420	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CD934_RS12420	COG1473	amidohydrolase
CD934_RS12430	COG2089	acid synthase
CD934_RS12445	COG1216	Glycosyl transferase, family 2
CD934_RS12465	COG1216	Glycosyl transferase, family 2
CD934_RS12485	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CD934_RS12505	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS12505	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS12520	COG1595	DNA-templated transcription, initiation
CD934_RS12555	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CD934_RS12565	COG2009	succinate dehydrogenase
CD934_RS12575	COG1053	succinate dehydrogenase
CD934_RS12590	COG1309	transcriptional regulator
CD934_RS12595	COG1408	metallophosphoesterase
CD934_RS12605	COG1686	Belongs to the peptidase S11 family
CD934_RS12620	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CD934_RS12625	COG0671	phosphoesterase, PA-phosphatase related
CD934_RS12645	COG0180	Tryptophanyl-tRNA synthetase
CD934_RS12650	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CD934_RS12655	COG0754	glutathionylspermidine amidase activity
CD934_RS12665	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CD934_RS12670	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CD934_RS12675	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CD934_RS12690	COG4176	ABC-type proline glycine betaine transport system permease component
CD934_RS12695	COG0517	IMP dehydrogenase activity
CD934_RS12695	COG4175	Glycine betaine
CD934_RS12705	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS12710	COG0039	L-malate dehydrogenase activity
CD934_RS12725	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CD934_RS12745	COG0138	bifunctional purine biosynthesis protein purh
CD934_RS12775	COG0045	succinate-CoA ligase (ADP-forming) activity
CD934_RS12800	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CD934_RS12805	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CD934_RS12810	COG0714	Associated with various cellular activities
CD934_RS12825	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS12825	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CD934_RS12835	COG0739	heme binding
CD934_RS12865	COG2197	response regulator
CD934_RS12905	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CD934_RS12905	COG0519	Catalyzes the synthesis of GMP from XMP
CD934_RS12930	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS12935	COG0515	serine threonine protein kinase
CD934_RS12940	COG0515	serine threonine protein kinase
CD934_RS12945	COG0515	serine threonine protein kinase
CD934_RS12950	COG0515	serine threonine protein kinase
CD934_RS12980	COG2945	thiolester hydrolase activity
CD934_RS12980	COG0596	Alpha beta hydrolase
CD934_RS12990	COG4821	SIS domain
CD934_RS13005	COG2252	PERMEase
CD934_RS13015	COG0259	pyridoxamine-phosphate oxidase activity
CD934_RS13030	COG1024	Enoyl-CoA hydratase
CD934_RS13045	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CD934_RS13065	COG0702	epimerase
CD934_RS13085	COG0247	lactate metabolic process
CD934_RS13085	COG0277	FAD linked oxidase domain protein
CD934_RS13115	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CD934_RS13185	COG0667	Aldo Keto reductase
CD934_RS13215	COG2252	PERMEase
CD934_RS13225	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CD934_RS13265	COG2814	Major facilitator Superfamily
CD934_RS13275	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CD934_RS13280	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
CD934_RS13315	COG1061	Type III restriction enzyme res subunit
CD934_RS13330	COG3973	AAA domain
CD934_RS13345	COG1404	Belongs to the peptidase S8 family
CD934_RS13375	COG1737	Transcriptional regulator
CD934_RS13380	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CD934_RS13435	COG0459	protein refolding
CD934_RS13440	COG1278	Cold shock
CD934_RS13455	COG0463	Glycosyl transferase, family 2
CD934_RS13485	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CD934_RS13520	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CD934_RS13570	COG2378	regulation of single-species biofilm formation
CD934_RS13575	COG3842	ATPase activity
CD934_RS13600	COG0215	cysteine-tRNA ligase activity
CD934_RS13605	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CD934_RS13610	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CD934_RS13620	COG1329	Transcriptional regulator
CD934_RS13640	COG5002	protein histidine kinase activity
CD934_RS13660	COG0588	phosphoglycerate mutase activity
CD934_RS13770	COG0438	transferase activity, transferring glycosyl groups
CD934_RS13810	COG2814	Major facilitator Superfamily
CD934_RS13815	COG2318	DinB family
CD934_RS13820	COG0395	ABC-type sugar transport system, permease component
CD934_RS13825	COG1175	transmembrane transport
CD934_RS13840	COG2186	Transcriptional regulator
CD934_RS13845	COG1733	regulation of RNA biosynthetic process
CD934_RS13855	COG3973	AAA domain
CD934_RS13870	COG0546	phosphoglycolate phosphatase activity
CD934_RS13875	COG2186	Transcriptional regulator
CD934_RS13890	COG4552	Acetyltransferase involved in intracellular survival and related
CD934_RS13900	COG1490	D-aminoacyl-tRNA deacylase activity
CD934_RS13905	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CD934_RS13910	COG0735	belongs to the Fur family
CD934_RS13915	COG3485	protocatechuate 3,4-dioxygenase
CD934_RS13940	COG2897	thiosulfate sulfurtransferase activity
CD934_RS13965	COG0745	RESPONSE REGULATOR receiver
CD934_RS13970	COG1609	Transcriptional regulator
CD934_RS13975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CD934_RS14000	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CD934_RS14025	COG0456	acetyltransferase
CD934_RS14040	COG1725	Transcriptional regulator
CD934_RS14045	COG1131	(ABC) transporter
CD934_RS14055	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CD934_RS14065	COG0406	alpha-ribazole phosphatase activity
CD934_RS14065	COG0494	nUDIX hydrolase
CD934_RS14085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CD934_RS14090	COG0306	phosphate transporter
CD934_RS14100	COG1937	Protein conserved in bacteria
CD934_RS14115	COG0277	FAD linked oxidase domain protein
CD934_RS14120	COG0671	phosphoesterase, PA-phosphatase related
CD934_RS14125	COG1196	nuclear chromosome segregation
CD934_RS14125	COG0739	heme binding
CD934_RS14125	COG0741	lytic transglycosylase activity
CD934_RS14165	COG1131	(ABC) transporter
CD934_RS14175	COG4585	Histidine kinase
CD934_RS14180	COG2197	response regulator
CD934_RS14200	COG1252	NADH dehydrogenase
CD934_RS14220	COG0579	oxidoreductase
CD934_RS14225	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CD934_RS14235	COG0739	heme binding
CD934_RS14235	COG1196	nuclear chromosome segregation
CD934_RS14235	COG0741	lytic transglycosylase activity
CD934_RS14245	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CD934_RS14245	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CD934_RS14250	COG2197	response regulator
CD934_RS14255	COG3851	Histidine kinase
CD934_RS14270	COG2267	carboxylic ester hydrolase activity
CD934_RS14280	COG0513	Belongs to the DEAD box helicase family
CD934_RS14390	COG1643	Atp-dependent helicase
CD934_RS14415	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CD934_RS14425	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CD934_RS14455	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CD934_RS14460	COG0047	phosphoribosylformylglycinamidine synthase activity
CD934_RS14465	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CD934_RS14500	COG2197	response regulator
CD934_RS14510	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CD934_RS14525	COG0151	Belongs to the GarS family
CD934_RS14545	COG0494	nUDIX hydrolase
CD934_RS14555	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS14590	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CD934_RS14625	COG1191	sigma factor activity
CD934_RS14630	COG1191	sigma factor activity
CD934_RS14645	COG0477	Major facilitator Superfamily
CD934_RS14650	COG2353	YceI-like domain
CD934_RS14670	COG3467	pyridoxamine 5'-phosphate
CD934_RS14680	COG0477	Major facilitator Superfamily
CD934_RS14685	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CD934_RS14700	COG2205	protein histidine kinase activity
CD934_RS14705	COG0745	RESPONSE REGULATOR receiver
CD934_RS14740	COG0784	Response regulator, receiver
CD934_RS14745	COG1309	transcriptional regulator
CD934_RS14750	COG2814	Major facilitator Superfamily
CD934_RS14755	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS14760	COG3415	Transposase
CD934_RS14760	COG2801	Transposase and inactivated derivatives
CD934_RS14765	COG1595	DNA-templated transcription, initiation
CD934_RS14800	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CD934_RS14820	COG0653	protein targeting
CD934_RS14835	COG0006	proline dipeptidase activity
CD934_RS14855	COG1999	signal sequence binding
CD934_RS14870	COG2837	iron assimilation
CD934_RS14880	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CD934_RS14885	COG0561	phosphatase activity
CD934_RS14910	COG1131	(ABC) transporter
CD934_RS14920	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CD934_RS14935	COG0561	phosphatase activity
CD934_RS14940	COG1196	nuclear chromosome segregation
CD934_RS14940	COG0741	lytic transglycosylase activity
CD934_RS14940	COG0739	heme binding
CD934_RS14945	COG4988	ABC transporter
CD934_RS14950	COG1294	oxidase, subunit
CD934_RS14955	COG1271	oxidase subunit
CD934_RS14960	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CD934_RS14965	COG1609	Transcriptional regulator
CD934_RS14985	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CD934_RS15010	COG0662	Cupin 2, conserved barrel domain protein
CD934_RS15015	COG1950	PFAM Membrane protein of
CD934_RS15020	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CD934_RS15025	COG0626	cystathionine gamma-synthase activity
CD934_RS15050	COG2814	Major facilitator Superfamily
CD934_RS15070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CD934_RS15075	COG0305	Participates in initiation and elongation during chromosome replication
CD934_RS15085	COG0359	binds to the 23S rRNA
CD934_RS15090	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CD934_RS15095	COG0629	single-stranded DNA binding
CD934_RS15100	COG0360	Binds together with S18 to 16S ribosomal RNA
CD934_RS15125	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CD934_RS15135	COG1260	myo-inositol-1-phosphate synthase
CD934_RS15150	COG0617	tRNA 3'-terminal CCA addition
CD934_RS15170	COG1595	DNA-templated transcription, initiation
CD934_RS15180	COG0492	ferredoxin-NADP+ reductase activity
CD934_RS15185	COG3118	belongs to the thioredoxin family
CD934_RS15200	COG1192	Involved in chromosome partitioning
CD934_RS15205	COG0357	Ribosomal RNA small subunit methyltransferase G
CD934_RS15215	COG0706	membrane insertase activity
CD934_RS15220	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CD934_RS15225	COG0594	ribonuclease P activity
CD934_RS15230	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CD934_RS15240	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CD934_RS15250	COG0592	DNA-directed DNA polymerase activity
CD934_RS15255	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CD934_RS15260	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CD934_RS15265	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
CD934_RS15270	COG0187	DNA topoisomerase II activity
CD934_RS15275	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CD934_RS15305	COG0515	serine threonine protein kinase
CD934_RS15330	COG0705	Rhomboid family
CD934_RS15355	COG3764	Sortase (surface protein transpeptidase)
CD934_RS15360	COG3764	Sortase (surface protein transpeptidase)
CD934_RS15365	COG0515	serine threonine protein kinase
CD934_RS15375	COG0768	penicillin binding
CD934_RS15390	COG1716	ATPase activity
CD934_RS15395	COG1716	ATPase activity
CD934_RS15435	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CD934_RS15440	COG2151	metal-sulfur cluster biosynthetic enzyme
CD934_RS15445	COG3396	Phenylacetate-CoA oxygenase
CD934_RS15450	COG3460	Phenylacetate-CoA oxygenase
CD934_RS15455	COG3396	Phenylacetate-CoA oxygenase
CD934_RS15480	COG1250	3-hydroxyacyl-CoA dehydrogenase
CD934_RS15485	COG1309	transcriptional regulator
CD934_RS15490	COG1522	sequence-specific DNA binding
CD934_RS15515	COG0303	'Molybdopterin
CD934_RS15535	COG0604	alcohol dehydrogenase
CD934_RS15550	COG0515	serine threonine protein kinase
CD934_RS15555	COG0515	serine threonine protein kinase
CD934_RS15565	COG0022	dehydrogenase e1 component
CD934_RS15570	COG0508	dehydrogenase complex catalyzes the overall conversion of
CD934_RS15580	COG2186	Transcriptional regulator
CD934_RS15585	COG2814	Major facilitator Superfamily
CD934_RS15620	COG1362	aminopeptidase activity
CD934_RS15625	COG1960	acyl-CoA dehydrogenase activity
CD934_RS15635	COG1741	Belongs to the pirin family
CD934_RS15645	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CD934_RS15660	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CD934_RS15675	COG0583	DNA-binding transcription factor activity
CD934_RS15735	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CD934_RS15745	COG0366	Alpha amylase catalytic
CD934_RS15770	COG1278	Cold shock
CD934_RS15780	COG0583	DNA-binding transcription factor activity
CD934_RS15790	COG2367	Beta-lactamase
CD934_RS15800	COG4213	ABC transporter substrate-binding protein
CD934_RS15810	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CD934_RS15815	COG1120	ATPase activity
CD934_RS15820	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS15825	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS15840	COG1595	DNA-templated transcription, initiation
CD934_RS15845	COG1252	NADH dehydrogenase
CD934_RS15890	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CD934_RS15890	COG2508	Transcriptional regulator
CD934_RS15910	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CD934_RS15920	COG0583	DNA-binding transcription factor activity
CD934_RS15935	COG2402	Toxic component of a toxin-antitoxin (TA) module. An RNase
CD934_RS15955	COG4249	Peptidase C14 caspase catalytic subunit p20
CD934_RS15955	COG2319	Wd-40 repeat
CD934_RS15970	COG1231	oxidoreductase activity
CD934_RS15995	COG0464	growth
CD934_RS16095	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CD934_RS16110	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CD934_RS16120	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CD934_RS16140	COG2188	Transcriptional regulator
CD934_RS16150	COG2188	Transcriptional regulator
CD934_RS16210	COG0717	Belongs to the dCTP deaminase family
CD934_RS16215	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CD934_RS16235	COG0247	lactate metabolic process
CD934_RS16235	COG2181	nitrate reductase activity
CD934_RS16240	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CD934_RS16245	COG0443	Heat shock 70 kDa protein
CD934_RS16250	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CD934_RS16255	COG0484	heat shock protein binding
CD934_RS16260	COG0789	Transcriptional regulator
CD934_RS16265	COG4213	ABC transporter substrate-binding protein
CD934_RS16295	COG0542	response to heat
CD934_RS16315	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CD934_RS16325	COG2017	converts alpha-aldose to the beta-anomer
CD934_RS16330	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CD934_RS16335	COG0191	fructose-bisphosphate aldolase activity
CD934_RS16340	COG0477	Major facilitator Superfamily
CD934_RS16355	COG3844	kynureninase activity
CD934_RS16375	COG4585	Histidine kinase
CD934_RS16380	COG2197	response regulator
CD934_RS16385	COG4585	Histidine kinase
CD934_RS16390	COG2197	response regulator
CD934_RS16400	COG3559	Exporter of polyketide antibiotics
CD934_RS16405	COG1131	(ABC) transporter
CD934_RS16435	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CD934_RS16465	COG1802	Transcriptional regulator
CD934_RS16475	COG0693	protein deglycase activity
CD934_RS16490	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CD934_RS16500	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CD934_RS16505	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CD934_RS16530	COG1595	DNA-templated transcription, initiation
CD934_RS16555	COG0701	Predicted permease
CD934_RS16580	COG2045	Belongs to the ComB family
CD934_RS16600	COG1408	metallophosphoesterase
CD934_RS16610	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CD934_RS16625	COG0003	Pfam Anion-transporting ATPase
CD934_RS16640	COG0251	oxidation-reduction process
CD934_RS16680	COG0596	Alpha beta hydrolase
CD934_RS16690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CD934_RS16695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CD934_RS16760	COG1205	dead DEAH box helicase
CD934_RS16760	COG1111	helicase
CD934_RS16765	COG1366	Belongs to the anti-sigma-factor antagonist family
CD934_RS16770	COG2172	sigma factor antagonist activity
CD934_RS16775	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
CD934_RS16785	COG2264	protein methyltransferase activity
CD934_RS16790	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CD934_RS16790	COG1754	DNA topoisomerase type I activity
CD934_RS16795	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CD934_RS16830	COG3903	Transcriptional regulator
CD934_RS16830	COG3629	intracellular signal transduction
CD934_RS16835	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CD934_RS16835	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CD934_RS16865	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CD934_RS16870	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CD934_RS16875	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CD934_RS16880	COG0254	rRNA binding
CD934_RS16890	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CD934_RS16910	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS16965	COG0789	Transcriptional regulator
CD934_RS16970	COG0586	Pfam SNARE associated Golgi protein
CD934_RS16980	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CD934_RS16985	COG2027	D-alanyl-D-alanine carboxypeptidase
CD934_RS16995	COG0037	tRNA processing
CD934_RS17010	COG0302	gtp cyclohydrolase
CD934_RS17025	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CD934_RS17055	COG0649	NAD binding
CD934_RS17070	COG2197	response regulator
CD934_RS17075	COG1660	Displays ATPase and GTPase activities
CD934_RS17095	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CD934_RS17100	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CD934_RS17110	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CD934_RS17130	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CD934_RS17160	COG0739	heme binding
CD934_RS17180	COG0346	lactoylglutathione lyase activity
CD934_RS17185	COG2205	protein histidine kinase activity
CD934_RS17190	COG0745	RESPONSE REGULATOR receiver
CD934_RS17200	COG1595	DNA-templated transcription, initiation
CD934_RS17205	COG1194	a g-specific adenine glycosylase
CD934_RS17235	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
CD934_RS17255	COG0248	Ppx GppA phosphatase
CD934_RS17260	COG1082	Xylose isomerase domain protein TIM barrel
CD934_RS17270	COG0129	dihydroxy-acid dehydratase activity
CD934_RS17280	COG4991	sh3 domain protein
CD934_RS17295	COG0842	Transport permease protein
CD934_RS17295	COG1129	ABC transporter
CD934_RS17305	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CD934_RS17310	COG1335	isochorismatase
CD934_RS17320	COG0180	Tryptophanyl-tRNA synthetase
CD934_RS17345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CD934_RS17355	COG0123	including yeast histone deacetylase and acetoin utilization protein
CD934_RS17405	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CD934_RS17410	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CD934_RS17415	COG0181	hydroxymethylbilane synthase activity
CD934_RS17420	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CD934_RS17420	COG1648	precorrin-2 dehydrogenase activity
CD934_RS17450	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CD934_RS17470	COG0702	epimerase
CD934_RS17475	COG3631	Ketosteroid isomerase-related protein
CD934_RS17490	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CD934_RS17505	COG0113	porphobilinogen synthase activity
CD934_RS17520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CD934_RS17530	COG0018	arginyl-trna synthetase
CD934_RS17535	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CD934_RS17555	COG1690	Belongs to the RtcB family
CD934_RS17565	COG1742	UPF0060 membrane protein
CD934_RS17570	COG1846	Transcriptional regulator
CD934_RS17590	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS17605	COG2205	protein histidine kinase activity
CD934_RS17610	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS17615	COG1116	anion transmembrane transporter activity
CD934_RS17650	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CD934_RS17655	COG0640	Transcriptional regulator
CD934_RS17660	COG0798	PFAM Bile acid sodium symporter
CD934_RS17680	COG0640	Transcriptional regulator
CD934_RS17740	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CD934_RS17745	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CD934_RS17755	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CD934_RS17760	COG0406	alpha-ribazole phosphatase activity
CD934_RS17775	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CD934_RS17780	COG0785	Cytochrome C biogenesis protein
CD934_RS17785	COG1333	cytochrome c biogenesis protein
CD934_RS17790	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CD934_RS17810	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CD934_RS17820	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CD934_RS17830	COG0163	prenyltransferase activity
CD934_RS17840	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CD934_RS17845	COG1573	uracil-dna glycosylase
CD934_RS17860	COG1301	dicarboxylic acid transport
CD934_RS17865	COG1309	transcriptional regulator
CD934_RS17875	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS17880	COG0183	Belongs to the thiolase family
CD934_RS17890	COG2226	methyltransferase
CD934_RS17910	COG1278	Cold shock
CD934_RS17915	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
CD934_RS17930	COG1674	ftsk spoiiie
CD934_RS17960	COG4842	Belongs to the WXG100 family
CD934_RS18055	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CD934_RS18125	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CD934_RS18140	COG2226	methyltransferase
CD934_RS18170	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18175	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18180	COG0649	NAD binding
CD934_RS18190	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CD934_RS18195	COG1034	ATP synthesis coupled electron transport
CD934_RS18200	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CD934_RS18205	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18210	COG0839	Belongs to the complex I subunit 6 family
CD934_RS18215	COG0713	ATP synthesis coupled electron transport
CD934_RS18220	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CD934_RS18230	COG1007	ATP synthesis coupled electron transport
CD934_RS18235	COG0514	ATP-dependent DNA helicase (RecQ)
CD934_RS18305	COG0561	phosphatase activity
CD934_RS18315	COG0142	geranyltranstransferase activity
CD934_RS18325	COG1131	(ABC) transporter
CD934_RS18340	COG0655	NAD(P)H dehydrogenase (quinone) activity
CD934_RS18370	COG0702	epimerase
CD934_RS18375	COG1733	regulation of RNA biosynthetic process
CD934_RS18380	COG1013	pyruvate-flavodoxin oxidoreductase activity
CD934_RS18385	COG0674	pyruvate-flavodoxin oxidoreductase activity
CD934_RS18385	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CD934_RS18405	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18410	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18415	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18420	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CD934_RS18425	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CD934_RS18430	COG0839	Belongs to the complex I subunit 6 family
CD934_RS18435	COG0713	ATP synthesis coupled electron transport
CD934_RS18440	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CD934_RS18450	COG1007	ATP synthesis coupled electron transport
CD934_RS18455	COG0501	Belongs to the peptidase M48B family
CD934_RS18460	COG3304	Inner membrane component domain
CD934_RS18470	COG2261	transglycosylase associated protein
CD934_RS18475	COG1666	GTP binding
CD934_RS18490	COG0702	epimerase
CD934_RS18510	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CD934_RS18515	COG2030	dehydratase
CD934_RS18525	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CD934_RS18530	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CD934_RS18540	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CD934_RS18545	COG0436	Aminotransferase
CD934_RS18560	COG0250	Participates in transcription elongation, termination and antitermination
CD934_RS18565	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CD934_RS18570	COG0081	regulation of translation
CD934_RS18580	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CD934_RS18585	COG0222	ribosome binding
CD934_RS18595	COG0085	RNA polymerase activity
CD934_RS18600	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CD934_RS18635	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CD934_RS18640	COG0049	tRNA binding
CD934_RS18645	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CD934_RS18650	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CD934_RS18675	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CD934_RS18690	COG0051	transcription antitermination factor activity, RNA binding
CD934_RS18695	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CD934_RS18700	COG0088	Forms part of the polypeptide exit tunnel
CD934_RS18705	COG0089	rRNA binding
CD934_RS18710	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CD934_RS18715	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CD934_RS18720	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CD934_RS18725	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CD934_RS18730	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CD934_RS18735	COG0255	Belongs to the universal ribosomal protein uL29 family
CD934_RS18740	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CD934_RS18745	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CD934_RS18750	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CD934_RS18755	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CD934_RS18760	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CD934_RS18770	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CD934_RS18775	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CD934_RS18780	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CD934_RS18785	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CD934_RS18790	COG1841	ribosomal large subunit assembly
CD934_RS18795	COG0200	Binds to the 23S rRNA
CD934_RS18805	COG0563	adenylate kinase activity
CD934_RS18815	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CD934_RS18820	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CD934_RS18825	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CD934_RS18830	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CD934_RS18835	COG0202	RNA polymerase activity
CD934_RS18840	COG0203	ribosomal protein L17
CD934_RS18845	COG0101	tRNA pseudouridine synthase activity
CD934_RS18860	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CD934_RS18865	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CD934_RS18870	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CD934_RS18880	COG1072	(Pantothenic acid kinase))
CD934_RS18885	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CD934_RS18890	COG0736	holo-[acyl-carrier-protein] synthase activity
CD934_RS18895	COG1191	sigma factor activity
CD934_RS18910	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CD934_RS18920	COG0802	atpase or kinase
CD934_RS18930	COG1214	PFAM Peptidase M22, glycoprotease
CD934_RS18930	COG0456	acetyltransferase
CD934_RS18940	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CD934_RS18950	COG1609	Transcriptional regulator
CD934_RS18965	COG4941	Belongs to the sigma-70 factor family
CD934_RS18975	COG0726	polysaccharide deacetylase
CD934_RS18980	COG0726	polysaccharide deacetylase
CD934_RS18985	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CD934_RS18990	COG0459	protein refolding
CD934_RS19020	COG4221	oxidoreductase activity
CD934_RS19030	COG0583	DNA-binding transcription factor activity
CD934_RS19045	COG1595	DNA-templated transcription, initiation
CD934_RS19055	COG0516	GMP reductase activity
CD934_RS19065	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CD934_RS19135	COG2271	Major facilitator Superfamily
CD934_RS19145	COG2072	flavoprotein involved in K transport
CD934_RS19155	COG0259	pyridoxamine-phosphate oxidase activity
CD934_RS19165	COG1309	transcriptional regulator
CD934_RS19175	COG0515	serine threonine protein kinase
CD934_RS19175	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CD934_RS19190	COG3903	Transcriptional regulator
CD934_RS19190	COG3629	intracellular signal transduction
CD934_RS19205	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CD934_RS19245	COG1686	Belongs to the peptidase S11 family
CD934_RS19270	COG0386	Belongs to the glutathione peroxidase family
CD934_RS19285	COG2814	Major facilitator Superfamily
CD934_RS19285	COG0477	Major facilitator Superfamily
CD934_RS19295	COG0745	RESPONSE REGULATOR receiver
CD934_RS19300	COG2205	protein histidine kinase activity
CD934_RS19355	COG2207	Transcriptional regulator
CD934_RS19355	COG3708	Transcriptional regulator
CD934_RS19380	COG0513	Belongs to the DEAD box helicase family
CD934_RS19385	COG1278	Cold shock
CD934_RS19455	COG1846	Transcriptional regulator
CD934_RS19460	COG3384	dioxygenase
CD934_RS19465	COG1247	-acetyltransferase
CD934_RS19485	COG0477	Major facilitator Superfamily
CD934_RS19490	COG1349	DNA-binding transcription factor activity
CD934_RS19505	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CD934_RS19505	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CD934_RS19505	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CD934_RS19520	COG3191	aminopeptidase activity
CD934_RS19530	COG1970	mechanosensitive ion channel activity
CD934_RS19540	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CD934_RS19565	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CD934_RS19570	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CD934_RS19580	COG0315	cyclic pyranopterin monophosphate synthase activity
CD934_RS19585	COG0521	Mo-molybdopterin cofactor biosynthetic process
CD934_RS19585	COG0315	cyclic pyranopterin monophosphate synthase activity
CD934_RS19590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CD934_RS19630	COG0708	Exodeoxyribonuclease III
CD934_RS19640	COG2072	flavoprotein involved in K transport
CD934_RS19645	COG2267	carboxylic ester hydrolase activity
CD934_RS19660	COG0793	Belongs to the peptidase S41A family
CD934_RS19660	COG4946	Tricorn protease homolog
CD934_RS19670	COG2409	Drug exporters of the RND superfamily
CD934_RS19690	COG0442	prolyl-tRNA aminoacylation
CD934_RS19700	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CD934_RS19705	COG1846	Transcriptional regulator
CD934_RS19710	COG1122	ATPase activity
CD934_RS19720	COG0310	cobalt ion transport
CD934_RS19730	COG0768	penicillin binding
CD934_RS19755	COG0084	hydrolase, TatD family'
CD934_RS19760	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CD934_RS19765	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CD934_RS19770	COG0488	(ABC) transporter
CD934_RS19785	COG2197	response regulator
CD934_RS19810	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CD934_RS19820	COG2197	response regulator
CD934_RS19830	COG4106	trans-aconitate 2-methyltransferase activity
CD934_RS19835	COG1309	transcriptional regulator
CD934_RS19845	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CD934_RS19860	COG0193	aminoacyl-tRNA hydrolase activity
CD934_RS19865	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CD934_RS19870	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CD934_RS19875	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CD934_RS19885	COG4585	Histidine kinase
CD934_RS19915	COG2814	Major facilitator Superfamily
CD934_RS19920	COG1136	(ABC) transporter
CD934_RS19925	COG0577	efflux transmembrane transporter activity
CD934_RS20000	COG0148	phosphopyruvate hydratase activity
CD934_RS20030	COG1252	NADH dehydrogenase
CD934_RS20035	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CD934_RS20040	COG0577	efflux transmembrane transporter activity
CD934_RS20045	COG0577	efflux transmembrane transporter activity
CD934_RS20045	COG1136	(ABC) transporter
CD934_RS20090	COG0183	Belongs to the thiolase family
CD934_RS20095	COG2755	lipolytic protein G-D-S-L family
CD934_RS20110	COG4221	oxidoreductase activity
CD934_RS20135	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CD934_RS20140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS20150	COG1228	amidohydrolase
CD934_RS20155	COG1191	sigma factor activity
CD934_RS20160	COG1366	Belongs to the anti-sigma-factor antagonist family
CD934_RS20170	COG3104	oligopeptide transport
CD934_RS20175	COG0745	RESPONSE REGULATOR receiver
CD934_RS20180	COG2205	protein histidine kinase activity
CD934_RS20225	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CD934_RS20235	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CD934_RS20245	COG1316	TRANSCRIPTIONal
CD934_RS20255	COG1316	TRANSCRIPTIONal
CD934_RS20270	COG1316	TRANSCRIPTIONal
CD934_RS20275	COG1316	TRANSCRIPTIONal
CD934_RS20280	COG1316	TRANSCRIPTIONal
CD934_RS20305	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
CD934_RS20305	COG0778	Nitroreductase
CD934_RS20310	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CD934_RS20355	COG1620	l-lactate permease
CD934_RS20360	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CD934_RS20365	COG2835	tetraacyldisaccharide 4'-kinase activity
CD934_RS20375	COG1482	cell wall glycoprotein biosynthetic process
CD934_RS20390	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CD934_RS20435	COG0714	Associated with various cellular activities
CD934_RS20455	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
CD934_RS20460	COG0745	RESPONSE REGULATOR receiver
CD934_RS20465	COG5000	phosphorelay sensor kinase activity
CD934_RS20465	COG5002	protein histidine kinase activity
CD934_RS20470	COG0823	Involved in the tonB-independent uptake of proteins
CD934_RS20525	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CD934_RS20530	COG2197	response regulator
CD934_RS20535	COG3214	Protein conserved in bacteria
CD934_RS20545	COG0653	protein targeting
CD934_RS20565	COG2902	Dehydrogenase
CD934_RS20575	COG1215	transferase activity, transferring glycosyl groups
CD934_RS20580	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CD934_RS20585	COG1134	teichoic acid transport
CD934_RS20585	COG1388	LysM domain
CD934_RS20605	COG1846	Transcriptional regulator
CD934_RS20610	COG1764	response to oxidative stress
CD934_RS20625	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CD934_RS20630	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CD934_RS20635	COG1216	Glycosyl transferase, family 2
CD934_RS20640	COG0395	ABC-type sugar transport system, permease component
CD934_RS20645	COG1175	transmembrane transport
CD934_RS20660	COG0515	serine threonine protein kinase
CD934_RS20670	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CD934_RS20685	COG2884	Cell division ATP-binding protein ftsE
CD934_RS20695	COG0793	Belongs to the peptidase S41A family
CD934_RS20700	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CD934_RS20715	COG1609	Transcriptional regulator
CD934_RS20750	COG2223	nitrite transmembrane transporter activity
CD934_RS20775	COG3973	AAA domain
CD934_RS20785	COG0776	regulation of translation
CD934_RS20790	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CD934_RS20795	COG1678	Uncharacterized ACR, COG1678
CD934_RS20815	COG0395	ABC-type sugar transport system, permease component
CD934_RS20820	COG3525	Glycosyl hydrolase, family 20, catalytic domain
CD934_RS20835	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CD934_RS20870	COG3480	Lon protease (S16) C-terminal proteolytic domain
CD934_RS20880	COG1174	glycine betaine transport
CD934_RS20890	COG1174	glycine betaine transport
CD934_RS20900	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CD934_RS20910	COG0277	FAD linked oxidase domain protein
CD934_RS20940	COG1335	isochorismatase
CD934_RS20950	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CD934_RS20960	COG1113	amino acid transport
CD934_RS20990	COG1234	tRNA 3'-trailer cleavage
CD934_RS20995	COG1263	PTS System
CD934_RS21000	COG1263	PTS System
CD934_RS21005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CD934_RS21010	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CD934_RS21020	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CD934_RS21055	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CD934_RS21070	COG4555	ABC transporter
CD934_RS21085	COG2733	membrane
CD934_RS21090	COG2271	Major facilitator Superfamily
CD934_RS21100	COG0071	Belongs to the small heat shock protein (HSP20) family
CD934_RS21120	COG3226	Transcriptional regulator
CD934_RS21185	COG0706	membrane insertase activity
CD934_RS21195	COG2319	Wd-40 repeat
CD934_RS21200	COG4702	Belongs to the UPF0303 family
CD934_RS21205	COG0673	inositol 2-dehydrogenase activity
CD934_RS21210	COG1940	carbohydrate kinase activity
CD934_RS21260	COG3397	chitin binding
CD934_RS21275	COG1126	abc transporter atp-binding protein
CD934_RS21280	COG0765	amino acid transport
CD934_RS21285	COG0765	amino acid transport
CD934_RS21290	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS21305	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CD934_RS21345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS21375	COG0406	alpha-ribazole phosphatase activity
CD934_RS21400	COG0745	RESPONSE REGULATOR receiver
CD934_RS21410	COG3979	chitinase
CD934_RS21420	COG0395	ABC-type sugar transport system, permease component
CD934_RS21445	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CD934_RS21450	COG4977	sequence-specific DNA binding
CD934_RS21460	COG0589	response to stress
CD934_RS21465	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CD934_RS21490	COG3486	L-lysine 6-monooxygenase (NADPH) activity
CD934_RS21510	COG1960	acyl-CoA dehydrogenase activity
CD934_RS21525	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CD934_RS21530	COG1309	transcriptional regulator
CD934_RS21540	COG1946	Acyl-CoA thioesterase
CD934_RS21560	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CD934_RS21570	COG0028	Belongs to the TPP enzyme family
CD934_RS21590	COG2356	endonuclease I
CD934_RS21620	COG1472	Belongs to the glycosyl hydrolase 3 family
CD934_RS21635	COG1132	(ABC) transporter
CD934_RS21680	COG1609	Transcriptional regulator
CD934_RS21685	COG0673	inositol 2-dehydrogenase activity
CD934_RS21705	COG1674	ftsk spoiiie
CD934_RS21755	COG1869	D-ribose catabolic process
CD934_RS21760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS21765	COG1879	ABC-type sugar transport system periplasmic component
CD934_RS21770	COG1129	ABC transporter
CD934_RS21775	COG1609	Transcriptional regulator
CD934_RS21780	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CD934_RS21810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS21855	COG2319	Wd-40 repeat
CD934_RS21855	COG4249	Peptidase C14 caspase catalytic subunit p20
CD934_RS21880	COG0492	ferredoxin-NADP+ reductase activity
CD934_RS21900	COG0438	transferase activity, transferring glycosyl groups
CD934_RS21910	COG0728	peptidoglycan biosynthetic process
CD934_RS21920	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CD934_RS21950	COG2304	oxidoreductase activity
CD934_RS21965	COG2267	carboxylic ester hydrolase activity
CD934_RS22000	COG0629	single-stranded DNA binding
CD934_RS22090	COG1136	(ABC) transporter
CD934_RS22105	COG2346	COG2346, Truncated hemoglobins
CD934_RS22110	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CD934_RS22140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS22155	COG1486	melibiose metabolic process
CD934_RS22170	COG0668	transmembrane transport
CD934_RS22185	COG1136	(ABC) transporter
CD934_RS22225	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CD934_RS22240	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS22245	COG1309	transcriptional regulator
CD934_RS22305	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CD934_RS22315	COG1113	amino acid transport
CD934_RS22325	COG1113	amino acid transport
CD934_RS22340	COG4552	Acetyltransferase involved in intracellular survival and related
CD934_RS22360	COG3594	Acyltransferase
CD934_RS22380	COG0544	peptidyl-prolyl cis-trans isomerase activity
CD934_RS22385	COG0740	serine-type endopeptidase activity
CD934_RS22390	COG0740	serine-type endopeptidase activity
CD934_RS22395	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CD934_RS22405	COG0525	valine-tRNA ligase activity
CD934_RS22415	COG0285	dihydrofolate synthase activity
CD934_RS22425	COG0105	UTP biosynthetic process
CD934_RS22430	COG1077	Cell shape determining protein MreB Mrl
CD934_RS22450	COG0772	Belongs to the SEDS family
CD934_RS22485	COG1530	ribonuclease E activity
CD934_RS22495	COG0371	Dehydrogenase
CD934_RS22500	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CD934_RS22505	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CD934_RS22510	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CD934_RS22520	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CD934_RS22525	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CD934_RS22555	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CD934_RS22565	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CD934_RS22580	COG0501	Belongs to the peptidase M48B family
CD934_RS22585	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CD934_RS22595	COG0799	negative regulation of ribosome biogenesis
CD934_RS22600	COG0588	phosphoglycerate mutase activity
CD934_RS22620	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CD934_RS22635	COG0495	leucyl-tRNA aminoacylation
CD934_RS22645	COG1307	EDD domain protein, DegV family
CD934_RS22655	COG1234	tRNA 3'-trailer cleavage
CD934_RS22675	COG0268	Binds directly to 16S ribosomal RNA
CD934_RS22685	COG0481	GTPase activity
CD934_RS22720	COG1420	regulation of RNA biosynthetic process
CD934_RS22725	COG0484	heat shock protein binding
CD934_RS22745	COG0793	Belongs to the peptidase S41A family
CD934_RS22745	COG4946	Tricorn protease homolog
CD934_RS22750	COG0537	adenosine 5'-monophosphoramidase activity
CD934_RS22755	COG1234	tRNA 3'-trailer cleavage
CD934_RS22760	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CD934_RS22775	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS22780	COG4948	Mandelate Racemase Muconate Lactonizing
CD934_RS22790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS22800	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CD934_RS22810	COG2315	Protein conserved in bacteria
CD934_RS22825	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CD934_RS22830	COG2723	6-phospho-beta-galactosidase activity
CD934_RS22845	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CD934_RS22865	COG2409	Drug exporters of the RND superfamily
CD934_RS22870	COG4585	Histidine kinase
CD934_RS22875	COG2197	response regulator
CD934_RS22910	COG1381	Involved in DNA repair and RecF pathway recombination
CD934_RS22915	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CD934_RS22930	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CD934_RS22935	COG1121	(ABC) transporter
CD934_RS22940	COG0803	Belongs to the bacterial solute-binding protein 9 family
CD934_RS22940	COG3443	Belongs to the bacterial solute-binding protein 9 family
CD934_RS22945	COG0423	glycine-tRNA ligase activity
CD934_RS22955	COG0477	Major facilitator Superfamily
CD934_RS22965	COG0574	Belongs to the PEP-utilizing enzyme family
CD934_RS22965	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CD934_RS22985	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CD934_RS22985	COG2146	nitrite reductase [NAD(P)H] activity
CD934_RS22990	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CD934_RS23000	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CD934_RS23005	COG1733	regulation of RNA biosynthetic process
CD934_RS23025	COG0431	NADPH-dependent FMN reductase
CD934_RS23045	COG0243	molybdopterin cofactor binding
CD934_RS23050	COG2949	membrane
CD934_RS23060	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CD934_RS23070	COG0358	DNA primase activity
CD934_RS23075	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CD934_RS23090	COG1070	Carbohydrate kinase
CD934_RS23120	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS23145	COG1077	Cell shape determining protein MreB Mrl
CD934_RS23150	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CD934_RS23150	COG0825	malonyl-CoA metabolic process
CD934_RS23155	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS23165	COG2186	Transcriptional regulator
CD934_RS23185	COG1414	Transcriptional regulator
CD934_RS23190	COG3386	PFAM SMP-30 Gluconolaconase
CD934_RS23225	COG1175	transmembrane transport
CD934_RS23230	COG0395	ABC-type sugar transport system, permease component
CD934_RS23255	COG3507	Belongs to the glycosyl hydrolase 43 family
CD934_RS23260	COG3940	Belongs to the glycosyl hydrolase 43 family
CD934_RS23285	COG1127	ABC transporter
CD934_RS23295	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CD934_RS23355	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CD934_RS23365	COG4214	carbohydrate transport
CD934_RS23375	COG4213	ABC transporter substrate-binding protein
CD934_RS23405	COG2130	NADP-dependent
CD934_RS23420	COG1280	lysine exporter protein (LysE YggA)
CD934_RS23445	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CD934_RS23450	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS23455	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CD934_RS23470	COG1741	Belongs to the pirin family
CD934_RS23480	COG0789	Transcriptional regulator
CD934_RS23485	COG0667	Aldo Keto reductase
CD934_RS23500	COG1309	transcriptional regulator
CD934_RS23505	COG0477	Major facilitator Superfamily
CD934_RS23510	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CD934_RS23555	COG1358	cellular component organization or biogenesis
CD934_RS23565	COG0586	Pfam SNARE associated Golgi protein
CD934_RS23595	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CD934_RS23675	COG4122	O-methyltransferase activity
CD934_RS23720	COG3845	ABC transporter
CD934_RS23735	COG1657	PFAM Prenyltransferase squalene oxidase
CD934_RS23745	COG1309	transcriptional regulator
CD934_RS23750	COG0438	transferase activity, transferring glycosyl groups
CD934_RS23775	COG0860	N-Acetylmuramoyl-L-alanine amidase
CD934_RS23775	COG2247	cell wall binding repeat
CD934_RS23785	COG0477	Major facilitator Superfamily
CD934_RS23800	COG2030	dehydratase
CD934_RS23810	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CD934_RS23825	COG0800	Aldolase
CD934_RS23830	COG3022	response to hydroperoxide
CD934_RS23845	COG0789	Transcriptional regulator
CD934_RS23870	COG0210	DNA helicase
CD934_RS23880	COG1401	restriction endodeoxyribonuclease activity
CD934_RS23940	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CD934_RS23950	COG0515	serine threonine protein kinase
CD934_RS23950	COG2815	serine threonine protein kinase
CD934_RS23985	COG2018	Roadblock/LC7 domain
CD934_RS24025	COG0586	Pfam SNARE associated Golgi protein
CD934_RS24030	COG4585	Histidine kinase
CD934_RS24035	COG2197	response regulator
CD934_RS24070	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CD934_RS24095	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CD934_RS24110	COG2124	cytochrome p450
CD934_RS24115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS24115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS24125	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS24140	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS24145	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS24175	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS24180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CD934_RS24185	COG0183	Belongs to the thiolase family
CD934_RS24190	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CD934_RS24200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS24205	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CD934_RS24215	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS24240	COG0142	geranyltranstransferase activity
CD934_RS24245	COG2409	Drug exporters of the RND superfamily
CD934_RS24250	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CD934_RS24260	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CD934_RS24280	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS24285	COG3540	Alkaline phosphatase
CD934_RS24295	COG2814	Major facilitator Superfamily
CD934_RS24300	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CD934_RS24320	COG0584	glycerophosphoryl diester phosphodiesterase
CD934_RS24450	COG1994	Peptidase M50
CD934_RS24470	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CD934_RS24475	COG0477	Major facilitator Superfamily
CD934_RS24490	COG2814	Major facilitator Superfamily
CD934_RS24495	COG2814	Major facilitator Superfamily
CD934_RS24505	COG1609	Transcriptional regulator
CD934_RS24510	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CD934_RS24510	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CD934_RS24530	COG0174	glutamine synthetase
CD934_RS24570	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CD934_RS24580	COG1609	Transcriptional regulator
CD934_RS24585	COG2182	Extracellular solute-binding protein
CD934_RS24590	COG1175	transmembrane transport
CD934_RS24595	COG3833	ABC-type maltose transport systems, permease component
CD934_RS24600	COG0366	Alpha amylase catalytic
CD934_RS24620	COG1309	transcriptional regulator
CD934_RS24650	COG2197	response regulator
CD934_RS24690	COG0174	glutamine synthetase
CD934_RS24710	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CD934_RS24715	COG0321	lipoyl(octanoyl) transferase activity
CD934_RS24765	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CD934_RS24775	COG0508	dehydrogenase complex catalyzes the overall conversion of
CD934_RS24780	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CD934_RS24785	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CD934_RS24800	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CD934_RS24810	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CD934_RS24850	COG4585	Histidine kinase
CD934_RS24855	COG2197	response regulator
CD934_RS24860	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CD934_RS24865	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CD934_RS24890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS24900	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CD934_RS24905	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CD934_RS24915	COG1376	ErfK ybiS ycfS ynhG family protein
CD934_RS24925	COG1845	cytochrome c oxidase, subunit III
CD934_RS24930	COG2010	Cytochrome c
CD934_RS24935	COG0723	plastoquinol--plastocyanin reductase activity
CD934_RS24940	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CD934_RS24945	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CD934_RS24950	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CD934_RS24955	COG1929	Belongs to the glycerate kinase type-1 family
CD934_RS24965	COG0745	RESPONSE REGULATOR receiver
CD934_RS24970	COG2205	protein histidine kinase activity
CD934_RS25040	COG0003	Pfam Anion-transporting ATPase
CD934_RS25050	COG1940	carbohydrate kinase activity
CD934_RS25090	COG4585	Histidine kinase
CD934_RS25095	COG2197	response regulator
CD934_RS25110	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CD934_RS25120	COG2193	ferroxidase activity
CD934_RS25125	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CD934_RS25130	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
CD934_RS25135	COG0515	serine threonine protein kinase
CD934_RS25135	COG2815	serine threonine protein kinase
CD934_RS25140	COG2022	thiamine diphosphate biosynthetic process
CD934_RS25150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CD934_RS25150	COG2022	thiamine diphosphate biosynthetic process
CD934_RS25170	COG0352	thiamine-phosphate diphosphorylase activity
CD934_RS25190	COG1309	transcriptional regulator
CD934_RS25210	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CD934_RS25230	COG0714	Associated with various cellular activities
CD934_RS25240	COG0275	rRNA processing
CD934_RS25255	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CD934_RS25265	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CD934_RS25270	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CD934_RS25280	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CD934_RS25290	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CD934_RS25295	COG1496	oxidoreductase activity
CD934_RS25305	COG1799	cell septum assembly
CD934_RS25315	COG3599	regulation of cell shape
CD934_RS25320	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CD934_RS25335	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CD934_RS25350	COG3415	Transposase
CD934_RS25350	COG2801	Transposase and inactivated derivatives
CD934_RS25400	COG0587	DNA-directed DNA polymerase activity
CD934_RS25405	COG1432	Conserved Protein
CD934_RS25435	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CD934_RS25450	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CD934_RS25455	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CD934_RS25460	COG0131	Imidazoleglycerol-phosphate dehydratase
CD934_RS25465	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CD934_RS25470	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CD934_RS25475	COG0251	oxidation-reduction process
CD934_RS25480	COG0107	imidazoleglycerol-phosphate synthase activity
CD934_RS25495	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CD934_RS25500	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CD934_RS25520	COG0134	indole-3-glycerol-phosphate synthase activity
CD934_RS25530	COG0133	tryptophan synthase activity
CD934_RS25535	COG0159	tryptophan synthase activity
CD934_RS25545	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CD934_RS25550	COG2301	Belongs to the HpcH HpaI aldolase family
CD934_RS25555	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CD934_RS25575	COG1397	ADP-ribosylglycohydrolase
CD934_RS25585	COG0067	glutamate synthase
CD934_RS25585	COG0069	glutamate synthase activity
CD934_RS25585	COG0070	glutamate synthase
CD934_RS25605	COG2304	oxidoreductase activity
CD934_RS25615	COG0287	Prephenate dehydrogenase
CD934_RS25615	COG1605	Chorismate mutase
CD934_RS25620	COG0745	RESPONSE REGULATOR receiver
CD934_RS25640	COG0737	Belongs to the 5'-nucleotidase family
CD934_RS25685	COG2050	protein possibly involved in aromatic compounds catabolism
CD934_RS25715	COG1643	Atp-dependent helicase
CD934_RS25720	COG2226	methyltransferase
CD934_RS25725	COG0539	negative regulation of cytoplasmic translation
CD934_RS25735	COG0237	dephospho-CoA kinase activity
CD934_RS25750	COG2226	methyltransferase
CD934_RS25770	COG2267	carboxylic ester hydrolase activity
CD934_RS25805	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CD934_RS25810	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CD934_RS25855	COG0402	S-adenosylhomocysteine deaminase activity
CD934_RS25920	COG0598	Magnesium transport protein CorA
CD934_RS25925	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CD934_RS25925	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CD934_RS25930	COG2313	pseudouridylate synthase activity
CD934_RS25940	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CD934_RS25945	COG0584	glycerophosphoryl diester phosphodiesterase
CD934_RS25955	COG0556	nucleotide-excision repair
CD934_RS25975	COG0387	Pfam Sodium calcium exchanger
CD934_RS25980	COG1619	proteins homologs of microcin C7 resistance protein MccF
CD934_RS25985	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CD934_RS26000	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CD934_RS26005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CD934_RS26015	COG0723	plastoquinol--plastocyanin reductase activity
CD934_RS26025	COG0322	excinuclease ABC activity
CD934_RS26030	COG1660	Displays ATPase and GTPase activities
CD934_RS26035	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CD934_RS26040	COG1481	regulation of sporulation
CD934_RS26050	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CD934_RS26055	COG0126	phosphoglycerate kinase activity
CD934_RS26060	COG0149	triose-phosphate isomerase activity
CD934_RS26065	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CD934_RS26075	COG0166	Belongs to the GPI family
CD934_RS26090	COG1136	(ABC) transporter
CD934_RS26095	COG1695	Transcriptional regulator
CD934_RS26100	COG1653	transport
CD934_RS26105	COG0366	Alpha amylase catalytic
CD934_RS26110	COG1653	transport
CD934_RS26115	COG1175	transmembrane transport
CD934_RS26120	COG0395	ABC-type sugar transport system, permease component
CD934_RS26125	COG0363	glucosamine-6-phosphate deaminase activity
CD934_RS26140	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CD934_RS26150	COG0109	protoheme IX farnesyltransferase activity
CD934_RS26180	COG1131	(ABC) transporter
CD934_RS26185	COG2746	aminoglycoside 3-N-acetyltransferase activity
CD934_RS26200	COG0719	Fe-S assembly protein
CD934_RS26210	COG0396	ATPase activity
CD934_RS26215	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CD934_RS26220	COG0822	iron-sulfur transferase activity
CD934_RS26225	COG2151	metal-sulfur cluster biosynthetic enzyme
CD934_RS26230	COG2076	Multidrug Resistance protein
CD934_RS26235	COG2171	N-acyltransferase activity
CD934_RS26245	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS26295	COG1063	alcohol dehydrogenase
CD934_RS26300	COG0395	ABC-type sugar transport system, permease component
CD934_RS26315	COG1349	DNA-binding transcription factor activity
CD934_RS26320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CD934_RS26325	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CD934_RS26345	COG1802	Transcriptional regulator
CD934_RS26360	COG1175	transmembrane transport
CD934_RS26365	COG0395	ABC-type sugar transport system, permease component
CD934_RS26390	COG2755	lipolytic protein G-D-S-L family
CD934_RS26395	COG3866	Pectate lyase
CD934_RS26400	COG4677	pectinesterase activity
CD934_RS26425	COG1309	transcriptional regulator
CD934_RS26440	COG1595	DNA-templated transcription, initiation
CD934_RS26445	COG0768	penicillin binding
CD934_RS26450	COG2197	response regulator
CD934_RS26455	COG4585	Histidine kinase
CD934_RS26470	COG1414	Transcriptional regulator
CD934_RS26480	COG2197	response regulator
CD934_RS26485	COG4585	Histidine kinase
CD934_RS26495	COG3844	kynureninase activity
CD934_RS26500	COG5285	phytanoyl-CoA dioxygenase
CD934_RS26505	COG1917	Cupin 2, conserved barrel domain protein
CD934_RS26510	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CD934_RS26515	COG0456	acetyltransferase
CD934_RS26520	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CD934_RS26525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CD934_RS26530	COG0765	amino acid transport
CD934_RS26545	COG3570	aminoglycoside hydroxyurea antibiotic resistance kinase
CD934_RS26585	COG1797	cobyrinic acid a,c-diamide synthase activity
CD934_RS26605	COG1492	cobalamin metabolic process
CD934_RS26610	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
CD934_RS26625	COG0235	Class ii aldolase
CD934_RS26645	COG0488	(ABC) transporter
CD934_RS26655	COG1024	Enoyl-CoA hydratase
CD934_RS26695	COG3387	PFAM Glycoside hydrolase 15-related
CD934_RS26710	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CD934_RS26720	COG1404	Belongs to the peptidase S8 family
CD934_RS26735	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CD934_RS26740	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CD934_RS26760	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CD934_RS26790	COG2186	Transcriptional regulator
CD934_RS26810	COG0588	phosphoglycerate mutase activity
CD934_RS26815	COG0560	Phosphoserine phosphatase
CD934_RS26815	COG3830	Belongs to the UPF0237 family
CD934_RS26820	COG0842	Transport permease protein
CD934_RS26820	COG1131	(ABC) transporter
CD934_RS26820	COG1716	ATPase activity
CD934_RS26830	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CD934_RS26845	COG2197	response regulator
CD934_RS26860	COG1119	ATPase activity
CD934_RS26880	COG1881	PFAM PEBP family protein
CD934_RS26895	COG2094	Belongs to the DNA glycosylase MPG family
CD934_RS26930	COG0647	UMP catabolic process
CD934_RS26935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS26940	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS26945	COG1120	ATPase activity
CD934_RS26965	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CD934_RS26970	COG0497	DNA recombination
CD934_RS26975	COG0297	glycogen (starch) synthase activity
CD934_RS26985	COG3387	PFAM Glycoside hydrolase 15-related
CD934_RS26990	COG0504	CTP synthase activity
CD934_RS26995	COG0494	nUDIX hydrolase
CD934_RS27005	COG0686	Belongs to the AlaDH PNT family
CD934_RS27020	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CD934_RS27025	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CD934_RS27030	COG1187	pseudouridine synthase activity
CD934_RS27050	COG1056	cytidyltransferase-related domain
CD934_RS27050	COG1051	belongs to the nudix hydrolase family
CD934_RS27080	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CD934_RS27090	COG1160	GTP binding
CD934_RS27150	COG0671	phosphoesterase, PA-phosphatase related
CD934_RS27160	COG0477	Major facilitator Superfamily
CD934_RS27165	COG1960	acyl-CoA dehydrogenase activity
CD934_RS27170	COG1799	cell septum assembly
CD934_RS27190	COG0587	DNA-directed DNA polymerase activity
CD934_RS27195	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CD934_RS27235	COG1725	Transcriptional regulator
CD934_RS27250	COG0726	polysaccharide deacetylase
CD934_RS27250	COG1649	PFAM Uncharacterised BCR, COG1649
CD934_RS27265	COG2755	lipolytic protein G-D-S-L family
CD934_RS27280	COG2188	Transcriptional regulator
CD934_RS27285	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CD934_RS27295	COG1309	transcriptional regulator
CD934_RS27300	COG0243	molybdopterin cofactor binding
CD934_RS27305	COG2851	Citrate transporter
CD934_RS27335	COG0477	Major facilitator Superfamily
CD934_RS27345	COG0640	Transcriptional regulator
CD934_RS27355	COG1960	acyl-CoA dehydrogenase activity
CD934_RS27375	COG0789	Transcriptional regulator
CD934_RS27385	COG3876	Protein conserved in bacteria
CD934_RS27395	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS27420	COG1960	acyl-CoA dehydrogenase activity
CD934_RS27440	COG2149	membrane
CD934_RS27445	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CD934_RS27460	COG1063	alcohol dehydrogenase
CD934_RS27465	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS27475	COG3265	gluconokinase activity
CD934_RS27480	COG2186	Transcriptional regulator
CD934_RS27485	COG2801	Transposase and inactivated derivatives
CD934_RS27485	COG3415	Transposase
CD934_RS27490	COG3012	SEC-C Motif Domain Protein
CD934_RS27500	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CD934_RS27530	COG0667	Aldo Keto reductase
CD934_RS27535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS27545	COG0598	Magnesium transport protein CorA
CD934_RS27550	COG0588	phosphoglycerate mutase activity
CD934_RS27565	COG0215	cysteine-tRNA ligase activity
CD934_RS27575	COG2186	Transcriptional regulator
CD934_RS27580	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CD934_RS27585	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CD934_RS27590	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CD934_RS27595	COG1414	Transcriptional regulator
CD934_RS27600	COG0646	methionine synthase
CD934_RS27600	COG1410	methionine synthase
CD934_RS27605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CD934_RS27610	COG4166	transmembrane transport
CD934_RS27615	COG2197	response regulator
CD934_RS27625	COG0517	IMP dehydrogenase activity
CD934_RS27625	COG1994	Peptidase M50
CD934_RS27645	COG1222	aaa ATPase
CD934_RS27650	COG4122	O-methyltransferase activity
CD934_RS27665	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CD934_RS27670	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CD934_RS27675	COG1609	Transcriptional regulator
CD934_RS27685	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CD934_RS27690	COG0545	Peptidyl-prolyl cis-trans isomerase
CD934_RS27700	COG2378	regulation of single-species biofilm formation
CD934_RS27720	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CD934_RS27725	COG0805	protein transport
CD934_RS27740	COG0642	Histidine kinase
CD934_RS27780	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CD934_RS27785	COG0517	IMP dehydrogenase activity
CD934_RS27785	COG4175	Glycine betaine
CD934_RS27790	COG4176	ABC-type proline glycine betaine transport system permease component
CD934_RS27815	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CD934_RS27820	COG0531	amino acid
CD934_RS27830	COG0174	glutamine synthetase
CD934_RS27835	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS27840	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS27855	COG2801	Transposase and inactivated derivatives
CD934_RS27855	COG3415	Transposase
CD934_RS27890	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CD934_RS27895	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CD934_RS27900	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CD934_RS27905	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CD934_RS27910	COG5002	protein histidine kinase activity
CD934_RS27915	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CD934_RS27920	COG0072	phenylalanine-tRNA ligase activity
CD934_RS27920	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CD934_RS27945	COG1649	PFAM Uncharacterised BCR, COG1649
CD934_RS27955	COG0697	spore germination
CD934_RS27985	COG2259	Doxx family
CD934_RS28000	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CD934_RS28005	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CD934_RS28010	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CD934_RS28015	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CD934_RS28020	COG1438	arginine binding
CD934_RS28045	COG0137	argininosuccinate synthase activity
CD934_RS28050	COG0165	Argininosuccinate lyase
CD934_RS28065	COG0477	Major facilitator Superfamily
CD934_RS28075	COG0204	Acyl-transferase
CD934_RS28075	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS28080	COG0584	glycerophosphoryl diester phosphodiesterase
CD934_RS28110	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CD934_RS28115	COG2011	ABC-type metal ion transport system permease component
CD934_RS28120	COG1464	Belongs to the NlpA lipoprotein family
CD934_RS28135	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CD934_RS28140	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CD934_RS28140	COG1648	precorrin-2 dehydrogenase activity
CD934_RS28200	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CD934_RS28250	COG1175	transmembrane transport
CD934_RS28255	COG0395	ABC-type sugar transport system, permease component
CD934_RS28280	COG2176	DNA-directed DNA polymerase activity
CD934_RS28280	COG5002	protein histidine kinase activity
CD934_RS28295	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CD934_RS28315	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CD934_RS28320	COG1560	Kdo2-lipid A biosynthetic process
CD934_RS28325	COG0438	transferase activity, transferring glycosyl groups
CD934_RS28335	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CD934_RS28340	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CD934_RS28345	COG0217	transcriptional regulatory protein
CD934_RS28350	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CD934_RS28355	COG0632	four-way junction helicase activity
CD934_RS28360	COG2255	four-way junction helicase activity
CD934_RS28370	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CD934_RS28375	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CD934_RS28380	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CD934_RS28390	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CD934_RS28395	COG1196	nuclear chromosome segregation
CD934_RS28400	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CD934_RS28410	COG0124	histidyl-tRNA synthetase
CD934_RS28425	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CD934_RS28440	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CD934_RS28445	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CD934_RS28460	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CD934_RS28465	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CD934_RS28470	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CD934_RS28475	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CD934_RS28485	COG0006	proline dipeptidase activity
CD934_RS28490	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CD934_RS28495	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CD934_RS28505	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CD934_RS28510	COG0540	Belongs to the ATCase OTCase family
CD934_RS28515	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CD934_RS28525	COG0505	Belongs to the CarA family
CD934_RS28530	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CD934_RS28535	COG0167	dihydroorotate dehydrogenase activity
CD934_RS28540	COG0284	orotidine-5'-phosphate decarboxylase activity
CD934_RS28550	COG0194	GDP metabolic process
CD934_RS28555	COG1758	RNA polymerase activity
CD934_RS28565	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CD934_RS28580	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CD934_RS28590	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CD934_RS28595	COG2390	Transcriptional regulator
CD934_RS28615	COG0531	amino acid
CD934_RS28630	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CD934_RS28650	COG2233	PERMEase
CD934_RS28660	COG0738	Major facilitator superfamily
CD934_RS28665	COG1846	Transcriptional regulator
CD934_RS28665	COG1940	carbohydrate kinase activity
CD934_RS28670	COG0702	epimerase
CD934_RS28680	COG3201	nicotinamide mononucleotide transporter
CD934_RS28685	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CD934_RS28685	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CD934_RS28690	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CD934_RS28695	COG0140	phosphoribosyl-ATP diphosphatase activity
CD934_RS28700	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CD934_RS28720	COG2801	Transposase and inactivated derivatives
CD934_RS28720	COG3415	Transposase
CD934_RS28735	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CD934_RS28760	COG1960	acyl-CoA dehydrogenase activity
CD934_RS28785	COG1216	Glycosyl transferase, family 2
CD934_RS28800	COG2270	Major facilitator Superfamily
CD934_RS28810	COG2364	Membrane
CD934_RS28815	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CD934_RS28840	COG0438	transferase activity, transferring glycosyl groups
CD934_RS28845	COG0438	transferase activity, transferring glycosyl groups
CD934_RS28855	COG1984	allophanate hydrolase subunit 2
CD934_RS28860	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CD934_RS28865	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CD934_RS28870	COG4336	lyase activity
CD934_RS28875	COG2814	Major facilitator Superfamily
CD934_RS28900	COG1414	Transcriptional regulator
CD934_RS28915	COG2018	Roadblock/LC7 domain
CD934_RS28945	COG3706	GGDEF domain
CD934_RS28950	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CD934_RS28965	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CD934_RS28975	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CD934_RS28990	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CD934_RS29010	COG1716	ATPase activity
CD934_RS29030	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CD934_RS29040	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CD934_RS29040	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CD934_RS29055	COG0725	ABC transporter, periplasmic molybdate-binding protein
CD934_RS29065	COG1609	Transcriptional regulator
CD934_RS29105	COG1595	DNA-templated transcription, initiation
CD934_RS29110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS29115	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS29125	COG0604	alcohol dehydrogenase
CD934_RS29140	COG3396	Phenylacetate-CoA oxygenase
CD934_RS29150	COG3396	Phenylacetate-CoA oxygenase
CD934_RS29155	COG2151	metal-sulfur cluster biosynthetic enzyme
CD934_RS29160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CD934_RS29170	COG3483	tryptophan 2,3-dioxygenase activity
CD934_RS29180	COG3844	kynureninase activity
CD934_RS29220	COG0697	spore germination
CD934_RS29270	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CD934_RS29310	COG2318	DinB family
CD934_RS29320	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CD934_RS29330	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS29340	COG1968	undecaprenyl-diphosphatase activity
CD934_RS29350	COG0183	Belongs to the thiolase family
CD934_RS29365	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CD934_RS29400	COG0110	maltose O-acetyltransferase activity
CD934_RS29420	COG0640	Transcriptional regulator
CD934_RS29430	COG1832	CoA-binding protein
CD934_RS29435	COG0215	cysteine-tRNA ligase activity
CD934_RS29445	COG1739	Uncharacterized protein family UPF0029
CD934_RS29455	COG0156	8-amino-7-oxononanoate synthase activity
CD934_RS29460	COG0318	PFAM AMP-dependent synthetase and ligase
CD934_RS29470	COG3321	synthase
CD934_RS29470	COG0604	alcohol dehydrogenase
CD934_RS29475	COG0477	Major facilitator Superfamily
CD934_RS29485	COG2197	response regulator
CD934_RS29490	COG0420	3'-5' exonuclease activity
CD934_RS29495	COG0419	ATPase involved in DNA repair
CD934_RS29505	COG0488	(ABC) transporter
CD934_RS29525	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS29540	COG0626	cystathionine gamma-synthase activity
CD934_RS29550	COG3540	Alkaline phosphatase
CD934_RS29555	COG0596	Alpha beta hydrolase
CD934_RS29560	COG1595	DNA-templated transcription, initiation
CD934_RS29565	COG2188	Transcriptional regulator
CD934_RS29570	COG1940	carbohydrate kinase activity
CD934_RS29575	COG2197	response regulator
CD934_RS29600	COG3663	DNA glycosylase
CD934_RS29605	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CD934_RS29625	COG0456	acetyltransferase
CD934_RS29630	COG0577	efflux transmembrane transporter activity
CD934_RS29630	COG1136	(ABC) transporter
CD934_RS29635	COG1136	(ABC) transporter
CD934_RS29635	COG0577	efflux transmembrane transporter activity
CD934_RS29650	COG2226	methyltransferase
CD934_RS29655	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CD934_RS29660	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CD934_RS29665	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CD934_RS29700	COG0740	serine-type endopeptidase activity
CD934_RS29715	COG1309	transcriptional regulator
CD934_RS29720	COG0831	urea catabolic process
CD934_RS29725	COG0832	Belongs to the urease beta subunit family
CD934_RS29730	COG0804	urea catabolic process
CD934_RS29740	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CD934_RS29745	COG0829	nickel cation binding
CD934_RS29755	COG0204	Acyl-transferase
CD934_RS29760	COG0698	ribose 5-phosphate isomerase
CD934_RS29775	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CD934_RS29780	COG1834	amidinotransferase
CD934_RS29785	COG1522	sequence-specific DNA binding
CD934_RS29790	COG3279	Response regulator of the LytR AlgR family
CD934_RS29800	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CD934_RS29805	COG3275	phosphorelay sensor kinase activity
CD934_RS29815	COG2815	serine threonine protein kinase
CD934_RS29815	COG0515	serine threonine protein kinase
CD934_RS29830	COG0205	6-phosphofructokinase activity
CD934_RS29835	COG3442	glutamine amidotransferase
CD934_RS29840	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CD934_RS29845	COG0242	peptide deformylase activity
CD934_RS29855	COG1960	acyl-CoA dehydrogenase activity
CD934_RS29890	COG1012	belongs to the aldehyde dehydrogenase family
CD934_RS29900	COG1793	dna ligase
CD934_RS29920	COG1960	acyl-CoA dehydrogenase activity
CD934_RS29925	COG1960	acyl-CoA dehydrogenase activity
CD934_RS30015	COG2018	Roadblock/LC7 domain
CD934_RS30025	COG1946	Acyl-CoA thioesterase
CD934_RS30040	COG0254	rRNA binding
CD934_RS30050	COG1132	(ABC) transporter
CD934_RS30055	COG1132	(ABC) transporter
CD934_RS30065	COG1132	(ABC) transporter
CD934_RS30075	COG0492	ferredoxin-NADP+ reductase activity
CD934_RS30080	COG0432	Pfam Uncharacterised protein family UPF0047
CD934_RS30100	COG0589	response to stress
CD934_RS30150	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CD934_RS30175	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CD934_RS30195	COG1902	pentaerythritol trinitrate reductase activity
CD934_RS30200	COG0640	Transcriptional regulator
CD934_RS30205	COG0493	'glutamate synthase
CD934_RS30225	COG1309	transcriptional regulator
CD934_RS30230	COG0671	phosphoesterase, PA-phosphatase related
CD934_RS30270	COG0584	glycerophosphoryl diester phosphodiesterase
CD934_RS30335	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CD934_RS30350	COG3655	Transcriptional regulator
CD934_RS30355	COG2815	serine threonine protein kinase
CD934_RS30355	COG0515	serine threonine protein kinase
CD934_RS30375	COG1660	Displays ATPase and GTPase activities
CD934_RS30395	COG4585	Histidine kinase
CD934_RS30400	COG2197	response regulator
CD934_RS30415	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS30465	COG4565	transcriptional regulatory protein
CD934_RS30475	COG0673	inositol 2-dehydrogenase activity
CD934_RS30495	COG3387	PFAM Glycoside hydrolase 15-related
CD934_RS30500	COG1349	DNA-binding transcription factor activity
CD934_RS30505	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CD934_RS30515	COG2813	Specifically methylates the guanine in position
CD934_RS30525	COG1940	carbohydrate kinase activity
CD934_RS30530	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CD934_RS30560	COG0577	efflux transmembrane transporter activity
CD934_RS30585	COG1349	DNA-binding transcription factor activity
CD934_RS30620	COG1215	transferase activity, transferring glycosyl groups
CD934_RS30650	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS30665	COG1404	Belongs to the peptidase S8 family
CD934_RS30690	COG1404	Belongs to the peptidase S8 family
CD934_RS30765	COG3629	intracellular signal transduction
CD934_RS30765	COG3903	Transcriptional regulator
CD934_RS30780	COG2423	ornithine cyclodeaminase activity
CD934_RS30785	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CD934_RS30790	COG2175	clavaminate synthase activity
CD934_RS30825	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CD934_RS30840	COG2124	cytochrome p450
CD934_RS30855	COG2072	flavoprotein involved in K transport
CD934_RS30860	COG2838	Isocitrate dehydrogenase
CD934_RS30865	COG0668	transmembrane transport
CD934_RS30875	COG1132	(ABC) transporter
CD934_RS30880	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CD934_RS30890	COG2197	response regulator
CD934_RS30895	COG3851	Histidine kinase
CD934_RS30955	COG1175	transmembrane transport
CD934_RS30965	COG1472	Belongs to the glycosyl hydrolase 3 family
CD934_RS31000	COG1595	DNA-templated transcription, initiation
CD934_RS31010	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CD934_RS31010	COG1796	DNA polymerase
CD934_RS31025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS31030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS31035	COG1120	ATPase activity
CD934_RS31060	COG1132	(ABC) transporter
CD934_RS31065	COG1132	(ABC) transporter
CD934_RS31075	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CD934_RS31080	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CD934_RS31100	COG0735	belongs to the Fur family
CD934_RS31105	COG0523	cobalamin synthesis protein
CD934_RS31115	COG1121	(ABC) transporter
CD934_RS31140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CD934_RS31145	COG1116	anion transmembrane transporter activity
CD934_RS31145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CD934_RS31165	COG0745	RESPONSE REGULATOR receiver
CD934_RS31190	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CD934_RS31195	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CD934_RS31200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CD934_RS31205	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CD934_RS31215	COG1181	Belongs to the D-alanine--D-alanine ligase family
CD934_RS31220	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CD934_RS31250	COG4257	antibiotic catabolic process
CD934_RS31290	COG3693	PFAM glycoside hydrolase, family 10
CD934_RS31330	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CD934_RS31350	COG3693	PFAM glycoside hydrolase, family 10
CD934_RS31350	COG3507	Belongs to the glycosyl hydrolase 43 family
CD934_RS31350	COG2382	esterase
CD934_RS31390	COG1408	metallophosphoesterase
CD934_RS31395	COG2826	transposase and inactivated derivatives, IS30 family
CD934_RS31435	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
CD934_RS31455	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CD934_RS31475	COG0297	glycogen (starch) synthase activity
CD934_RS31480	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CD934_RS31510	COG0477	Major facilitator Superfamily
CD934_RS31545	COG3118	belongs to the thioredoxin family
CD934_RS31555	COG0492	ferredoxin-NADP+ reductase activity
CD934_RS31580	COG4948	Mandelate Racemase Muconate Lactonizing
CD934_RS31585	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS31610	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CD934_RS31640	COG0596	Alpha beta hydrolase
CD934_RS31640	COG2945	thiolester hydrolase activity
CD934_RS31645	COG0531	amino acid
CD934_RS31655	COG0726	polysaccharide deacetylase
CD934_RS31700	COG0583	DNA-binding transcription factor activity
CD934_RS31720	COG1053	succinate dehydrogenase
CD934_RS31725	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CD934_RS31740	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
CD934_RS31745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CD934_RS31755	COG3360	Dodecin
CD934_RS31765	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
CD934_RS31770	COG0121	glutamine amidotransferase
CD934_RS31775	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CD934_RS31810	COG1881	PFAM PEBP family protein
CD934_RS31835	COG0583	DNA-binding transcription factor activity
CD934_RS31845	COG2080	2 iron, 2 sulfur cluster binding
CD934_RS31850	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CD934_RS31855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CD934_RS31875	COG1609	Transcriptional regulator
CD934_RS31885	COG0596	Alpha beta hydrolase
CD934_RS31890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CD934_RS31895	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CD934_RS31900	COG0242	peptide deformylase activity
CD934_RS31960	COG0542	response to heat
CD934_RS31970	COG0577	efflux transmembrane transporter activity
CD934_RS31970	COG1136	(ABC) transporter
CD934_RS31975	COG1556	Lactate utilization protein
CD934_RS31980	COG1139	Iron-sulfur cluster binding protein
CD934_RS31985	COG0247	lactate metabolic process
CD934_RS31990	COG1070	Carbohydrate kinase
CD934_RS31995	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS31995	COG3347	Dehydrogenase
CD934_RS32000	COG4952	isomerase
CD934_RS32005	COG1129	ABC transporter
CD934_RS32010	COG1172	Belongs to the binding-protein-dependent transport system permease family
CD934_RS32035	COG1609	Transcriptional regulator
CD934_RS32050	COG1595	DNA-templated transcription, initiation
CD934_RS32060	COG1309	transcriptional regulator
CD934_RS32070	COG2706	6-phosphogluconolactonase activity
CD934_RS32110	COG1796	DNA polymerase
CD934_RS32110	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CD934_RS32115	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS32160	COG2124	cytochrome p450
CD934_RS32165	COG2124	cytochrome p450
CD934_RS32180	COG0435	Glutathione S-transferase
CD934_RS32270	COG2890	protein-(glutamine-N5) methyltransferase activity
CD934_RS32280	COG0248	Ppx GppA phosphatase
CD934_RS32320	COG0517	IMP dehydrogenase activity
CD934_RS32360	COG1132	(ABC) transporter
CD934_RS32415	COG1309	transcriptional regulator
CD934_RS32465	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CD934_RS32490	COG0673	inositol 2-dehydrogenase activity
CD934_RS32495	COG1609	Transcriptional regulator
CD934_RS32505	COG0667	Aldo Keto reductase
CD934_RS32510	COG1132	(ABC) transporter
CD934_RS32595	COG3290	protein histidine kinase activity
CD934_RS32650	COG2508	Transcriptional regulator
CD934_RS32665	COG0559	Belongs to the binding-protein-dependent transport system permease family
CD934_RS32685	COG0667	Aldo Keto reductase
CD934_RS32745	COG0326	Molecular chaperone. Has ATPase activity
CD934_RS32750	COG0596	Alpha beta hydrolase
CD934_RS32770	COG2308	Evidence 4 Homologs of previously reported genes of
CD934_RS32770	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
CD934_RS32780	COG3290	protein histidine kinase activity
CD934_RS32785	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CD934_RS32830	COG0477	Major facilitator Superfamily
CD934_RS32840	COG1609	Transcriptional regulator
CD934_RS32845	COG0395	ABC-type sugar transport system, permease component
CD934_RS32850	COG1175	transmembrane transport
CD934_RS32865	COG1070	Carbohydrate kinase
CD934_RS32885	COG0714	Associated with various cellular activities
CD934_RS32895	COG0110	maltose O-acetyltransferase activity
CD934_RS32915	COG0395	ABC-type sugar transport system, permease component
CD934_RS32920	COG1175	transmembrane transport
CD934_RS32925	COG1609	Transcriptional regulator
CD934_RS32935	COG0513	Belongs to the DEAD box helicase family
CD934_RS32955	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS32960	COG2326	polyphosphate kinase activity
CD934_RS32965	COG1501	Belongs to the glycosyl hydrolase 31 family
CD934_RS32970	COG2182	Extracellular solute-binding protein
CD934_RS32975	COG1175	transmembrane transport
CD934_RS32980	COG0395	ABC-type sugar transport system, permease component
CD934_RS33005	COG2188	Transcriptional regulator
CD934_RS33020	COG3321	synthase
CD934_RS33020	COG0604	alcohol dehydrogenase
CD934_RS33040	COG2124	cytochrome p450
CD934_RS33045	COG0110	maltose O-acetyltransferase activity
CD934_RS33065	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CD934_RS33080	COG1073	alpha beta
CD934_RS33150	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CD934_RS33175	COG0531	amino acid
CD934_RS33180	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CD934_RS33185	COG4521	taurine ABC transporter
CD934_RS33195	COG2175	clavaminate synthase activity
CD934_RS33205	COG1028	Short-chain dehydrogenase reductase Sdr
CD934_RS33320	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CD934_RS33325	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CD934_RS33330	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CD934_RS33335	COG0438	transferase activity, transferring glycosyl groups
CD934_RS33350	COG0531	amino acid
CD934_RS33375	COG0300	oxidoreductase activity
CD934_RS33380	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CD934_RS33385	COG2249	NAD(P)H dehydrogenase (quinone) activity
CD934_RS33440	COG0142	geranyltranstransferase activity
CD934_RS33940	COG4608	Belongs to the ABC transporter superfamily
CD934_RS34130	COG1930	Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
CD934_RS34155	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CD934_RS34165	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CD934_RS34315	COG1596	polysaccharide export
CD934_RS34315	COG1555	photosystem II stabilization
CD934_RS34335	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CD934_RS34480	COG0789	Transcriptional regulator