BB341_RS00155	SM00960	Roadblock/LC7 domain
BB341_RS00170	SM00487	DEAD-like helicases superfamily
BB341_RS00170	SM00490	helicase superfamily c-terminal domain
BB341_RS00180	SM00644	BB341_RS00180
BB341_RS00230	SM00344	helix_turn_helix ASNC type
BB341_RS00245	SM00758	BB341_RS00245
BB341_RS00345	SM00984	UDP binding domain
BB341_RS00365	SM00823	Phosphopantetheine attachment site
BB341_RS00380	SM01329	BB341_RS00380
BB341_RS00420	SM00054	EF-hand, calcium binding motif
BB341_RS00425	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS00435	SM00382	ATPases associated with a variety of cellular activities
BB341_RS00435	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS00435	SM01043	Bacterial transcriptional activator domain
BB341_RS00440	SM00382	ATPases associated with a variety of cellular activities
BB341_RS00440	SM01086	C-terminal, D2-small domain, of ClpB protein
BB341_RS00445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS00445	SM00091	PAS domain
BB341_RS00445	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS00450	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS00480	SM00822	BB341_RS00480
BB341_RS00480	SM00823	Phosphopantetheine attachment site
BB341_RS00480	SM00824	Thioesterase
BB341_RS00480	SM00825	Beta-ketoacyl synthase
BB341_RS00480	SM00826	BB341_RS00480
BB341_RS00480	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS00505	SM01120	BB341_RS00505
BB341_RS00520	SM00120	Hemopexin-like repeats.
BB341_RS00550	SM00822	BB341_RS00550
BB341_RS00595	SM00382	ATPases associated with a variety of cellular activities
BB341_RS00600	SM00382	ATPases associated with a variety of cellular activities
BB341_RS00630	SM00829	Enoylreductase
BB341_RS00655	SM00382	ATPases associated with a variety of cellular activities
BB341_RS00705	SM00893	Electron transfer flavoprotein domain
BB341_RS00710	SM00893	Electron transfer flavoprotein domain
BB341_RS00715	SM00824	Thioesterase
BB341_RS00755	SM00644	BB341_RS00755
BB341_RS00790	SM00710	Parallel beta-helix repeats
BB341_RS00800	SM00458	Ricin-type beta-trefoil
BB341_RS00865	SM00567	E-Z type HEAT repeats
BB341_RS00875	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS00920	SM00831	Cation transporter/ATPase, N-terminus
BB341_RS01000	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB341_RS01040	SM00773	Proposed nucleic acid binding domain
BB341_RS01060	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01070	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS01090	SM00861	Transketolase, pyrimidine binding domain
BB341_RS01105	SM00824	Thioesterase
BB341_RS01115	SM00823	Phosphopantetheine attachment site
BB341_RS01160	SM00028	Tetratricopeptide repeats
BB341_RS01160	SM01043	Bacterial transcriptional activator domain
BB341_RS01215	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01220	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS01300	SM00028	Tetratricopeptide repeats
BB341_RS01300	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS01300	SM01043	Bacterial transcriptional activator domain
BB341_RS01310	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB341_RS01355	SM00422	helix_turn_helix, mercury resistance
BB341_RS01360	SM00829	Enoylreductase
BB341_RS01405	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01455	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS01465	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS01485	SM00710	Parallel beta-helix repeats
BB341_RS01485	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BB341_RS01490	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS01500	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB341_RS01525	SM00422	helix_turn_helix, mercury resistance
BB341_RS01530	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS01535	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01575	SM00421	helix_turn_helix, Lux Regulon
BB341_RS01575	SM00448	cheY-homologous receiver domain
BB341_RS01595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS01595	SM00895	BB341_RS01595
BB341_RS01620	SM00448	cheY-homologous receiver domain
BB341_RS01620	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS01625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS01625	SM00387	Histidine kinase-like ATPases
BB341_RS01625	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS01655	SM00344	helix_turn_helix ASNC type
BB341_RS01665	SM00344	helix_turn_helix ASNC type
BB341_RS01685	SM00354	helix_turn _helix lactose operon repressor
BB341_RS01735	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01760	SM00052	Putative diguanylate phosphodiesterase
BB341_RS01760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BB341_RS01760	SM00091	PAS domain
BB341_RS01760	SM00267	diguanylate cyclase
BB341_RS01795	SM00854	Bacterial capsule synthesis protein PGA_cap
BB341_RS01810	SM00387	Histidine kinase-like ATPases
BB341_RS01830	SM00448	cheY-homologous receiver domain
BB341_RS01830	SM00850	LytTr DNA-binding domain
BB341_RS01845	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB341_RS01845	SM01232	BB341_RS01845
BB341_RS01870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS01870	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BB341_RS01870	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS01910	SM00257	Lysin motif
BB341_RS01915	SM01350	BB341_RS01915
BB341_RS01935	SM00382	ATPases associated with a variety of cellular activities
BB341_RS01970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS01970	SM00387	Histidine kinase-like ATPases
BB341_RS01970	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS01975	SM00448	cheY-homologous receiver domain
BB341_RS01975	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS01990	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS01990	SM01009	AlkA N-terminal domain
BB341_RS02120	SM00923	MbtH-like protein
BB341_RS02125	SM00823	Phosphopantetheine attachment site
BB341_RS02175	SM00100	Cyclic nucleotide-monophosphate binding domain
BB341_RS02175	SM00419	helix_turn_helix, cAMP Regulatory protein
BB341_RS02190	SM00100	Cyclic nucleotide-monophosphate binding domain
BB341_RS02195	SM00382	ATPases associated with a variety of cellular activities
BB341_RS02375	SM00823	Phosphopantetheine attachment site
BB341_RS02385	SM00823	Phosphopantetheine attachment site
BB341_RS02390	SM00470	ParB-like nuclease domain
BB341_RS02405	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS02425	SM00387	Histidine kinase-like ATPases
BB341_RS02425	SM00433	TopoisomeraseII
BB341_RS02510	SM00822	BB341_RS02510
BB341_RS02515	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BB341_RS02600	SM00421	helix_turn_helix, Lux Regulon
BB341_RS02615	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS02640	SM00823	Phosphopantetheine attachment site
BB341_RS02690	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BB341_RS02690	SM00606	Cellulose Binding Domain Type IV
BB341_RS02700	SM00382	ATPases associated with a variety of cellular activities
BB341_RS02715	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB341_RS02725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS02740	SM00960	Roadblock/LC7 domain
BB341_RS02745	SM00387	Histidine kinase-like ATPases
BB341_RS02755	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BB341_RS02790	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS02835	SM00382	ATPases associated with a variety of cellular activities
BB341_RS02865	SM00822	BB341_RS02865
BB341_RS02900	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS02905	SM00316	Ribosomal protein S1-like RNA-binding domain
BB341_RS02905	SM00732	Likely ribonuclease with RNase H fold.
BB341_RS02925	SM00631	BB341_RS02925
BB341_RS02930	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB341_RS02940	SM00422	helix_turn_helix, mercury resistance
BB341_RS02980	SM00382	ATPases associated with a variety of cellular activities
BB341_RS02985	SM00382	ATPases associated with a variety of cellular activities
BB341_RS03090	SM00382	ATPases associated with a variety of cellular activities
BB341_RS03130	SM00812	Alpha-L-fucosidase
BB341_RS03135	SM00710	Parallel beta-helix repeats
BB341_RS03145	SM00710	Parallel beta-helix repeats
BB341_RS03155	SM00354	helix_turn _helix lactose operon repressor
BB341_RS03160	SM00776	BB341_RS03160
BB341_RS03165	SM00560	LamG-like jellyroll fold domain
BB341_RS03175	SM00458	Ricin-type beta-trefoil
BB341_RS03210	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03225	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03230	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03370	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
BB341_RS03370	SM00606	Cellulose Binding Domain Type IV
BB341_RS03395	SM00382	ATPases associated with a variety of cellular activities
BB341_RS03490	SM00458	Ricin-type beta-trefoil
BB341_RS03525	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03540	SM00829	Enoylreductase
BB341_RS03555	SM00849	Metallo-beta-lactamase superfamily
BB341_RS03570	SM00014	Acid phosphatase homologues
BB341_RS03570	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB341_RS03600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS03630	SM00448	cheY-homologous receiver domain
BB341_RS03650	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03660	SM00567	E-Z type HEAT repeats
BB341_RS03680	SM00829	Enoylreductase
BB341_RS03740	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS03740	SM00478	endonuclease III
BB341_RS03740	SM01009	AlkA N-terminal domain
BB341_RS03745	SM00506	Appr-1"-p processing enzyme
BB341_RS03795	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS03815	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB341_RS03830	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS03835	SM00382	ATPases associated with a variety of cellular activities
BB341_RS03850	SM00849	Metallo-beta-lactamase superfamily
BB341_RS03870	SM00382	ATPases associated with a variety of cellular activities
BB341_RS03885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS03885	SM00866	BB341_RS03885
BB341_RS03900	SM00421	helix_turn_helix, Lux Regulon
BB341_RS03900	SM00448	cheY-homologous receiver domain
BB341_RS03930	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS03965	SM00060	Fibronectin type 3 domain
BB341_RS03975	SM00947	Carbonic anhydrase
BB341_RS04035	SM00421	helix_turn_helix, Lux Regulon
BB341_RS04075	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS04085	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB341_RS04105	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04125	SM01266	BB341_RS04125
BB341_RS04140	SM00822	BB341_RS04140
BB341_RS04170	SM00421	helix_turn_helix, Lux Regulon
BB341_RS04175	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04180	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04190	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS04190	SM01260	BB341_RS04190
BB341_RS04200	SM00354	helix_turn _helix lactose operon repressor
BB341_RS04215	SM00327	von Willebrand factor (vWF) type A domain
BB341_RS04240	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BB341_RS04250	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BB341_RS04270	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS04280	SM00895	BB341_RS04280
BB341_RS04310	SM00421	helix_turn_helix, Lux Regulon
BB341_RS04335	SM00710	Parallel beta-helix repeats
BB341_RS04360	SM00825	Beta-ketoacyl synthase
BB341_RS04365	SM00825	Beta-ketoacyl synthase
BB341_RS04385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS04385	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS04415	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS04475	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04525	SM00479	BB341_RS04525
BB341_RS04535	SM00642	Alpha-amylase domain
BB341_RS04540	SM00642	Alpha-amylase domain
BB341_RS04545	SM00240	Forkhead associated domain
BB341_RS04570	SM00642	Alpha-amylase domain
BB341_RS04625	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS04695	SM00421	helix_turn_helix, Lux Regulon
BB341_RS04700	SM00341	Helicase and RNase D C-terminal
BB341_RS04700	SM00474	3'-5' exonuclease
BB341_RS04725	SM00861	Transketolase, pyrimidine binding domain
BB341_RS04735	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04775	SM00344	helix_turn_helix ASNC type
BB341_RS04780	SM00450	Rhodanese Homology Domain
BB341_RS04795	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS04800	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS04800	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS04900	SM00382	ATPases associated with a variety of cellular activities
BB341_RS04900	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS04900	SM01043	Bacterial transcriptional activator domain
BB341_RS04905	SM00470	ParB-like nuclease domain
BB341_RS04910	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS04940	SM01230	BB341_RS04940
BB341_RS04975	SM00448	cheY-homologous receiver domain
BB341_RS04975	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS04980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS04980	SM00387	Histidine kinase-like ATPases
BB341_RS04980	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS05015	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05020	SM00387	Histidine kinase-like ATPases
BB341_RS05020	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS05025	SM00448	cheY-homologous receiver domain
BB341_RS05025	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS05050	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05140	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS05155	SM00923	MbtH-like protein
BB341_RS05160	SM00823	Phosphopantetheine attachment site
BB341_RS05165	SM00823	Phosphopantetheine attachment site
BB341_RS05180	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS05200	SM00824	Thioesterase
BB341_RS05205	SM00823	Phosphopantetheine attachment site
BB341_RS05210	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS05210	SM01043	Bacterial transcriptional activator domain
BB341_RS05280	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05320	SM00450	Rhodanese Homology Domain
BB341_RS05345	SM00881	CoA binding domain
BB341_RS05355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS05355	SM00895	BB341_RS05355
BB341_RS05375	SM00434	DNA Topoisomerase IV
BB341_RS05380	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BB341_RS05395	SM00091	PAS domain
BB341_RS05395	SM00387	Histidine kinase-like ATPases
BB341_RS05400	SM00448	cheY-homologous receiver domain
BB341_RS05405	SM00387	Histidine kinase-like ATPases
BB341_RS05405	SM00433	TopoisomeraseII
BB341_RS05415	SM00020	Trypsin-like serine protease
BB341_RS05425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS05425	SM00895	BB341_RS05425
BB341_RS05430	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05445	SM00487	DEAD-like helicases superfamily
BB341_RS05445	SM00490	helicase superfamily c-terminal domain
BB341_RS05470	SM00855	Phosphoglycerate mutase family
BB341_RS05500	SM00487	DEAD-like helicases superfamily
BB341_RS05500	SM00491	BB341_RS05500
BB341_RS05505	SM01006	Siderophore biosynthesis protein domain
BB341_RS05535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS05535	SM00954	Region found in RelA / SpoT proteins
BB341_RS05570	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS05580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS05580	SM00387	Histidine kinase-like ATPases
BB341_RS05580	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS05585	SM00448	cheY-homologous receiver domain
BB341_RS05585	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS05590	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05595	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS05620	SM00450	Rhodanese Homology Domain
BB341_RS05630	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05660	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS05665	SM00487	DEAD-like helicases superfamily
BB341_RS05665	SM00490	helicase superfamily c-terminal domain
BB341_RS05670	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB341_RS05670	SM01232	BB341_RS05670
BB341_RS05685	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS05700	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS05710	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05710	SM00843	BB341_RS05710
BB341_RS05715	SM00448	cheY-homologous receiver domain
BB341_RS05720	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS05720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS05720	SM00387	Histidine kinase-like ATPases
BB341_RS05720	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS05720	SM00448	cheY-homologous receiver domain
BB341_RS05725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS05725	SM00091	PAS domain
BB341_RS05725	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS05750	SM00849	Metallo-beta-lactamase superfamily
BB341_RS05755	SM01130	BB341_RS05755
BB341_RS05790	SM00316	Ribosomal protein S1-like RNA-binding domain
BB341_RS05790	SM00322	K homology RNA-binding domain
BB341_RS05795	SM01387	BB341_RS05795
BB341_RS05805	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05880	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05885	SM00382	ATPases associated with a variety of cellular activities
BB341_RS05890	SM00904	Riboflavin kinase
BB341_RS05965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS06005	SM00060	Fibronectin type 3 domain
BB341_RS06005	SM00636	BB341_RS06005
BB341_RS06030	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06075	SM00344	helix_turn_helix ASNC type
BB341_RS06085	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06100	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06165	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06230	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06235	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06235	SM00962	SRP54-type protein, GTPase domain
BB341_RS06235	SM00963	SRP54-type protein, helical bundle domain
BB341_RS06240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS06245	SM00938	Nitrogen regulatory protein P-II
BB341_RS06260	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BB341_RS06265	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06265	SM00962	SRP54-type protein, GTPase domain
BB341_RS06265	SM00963	SRP54-type protein, helical bundle domain
BB341_RS06280	SM00968	SMC proteins Flexible Hinge Domain
BB341_RS06300	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB341_RS06300	SM01232	BB341_RS06300
BB341_RS06305	SM00358	Double-stranded RNA binding motif
BB341_RS06305	SM00535	Ribonuclease III family
BB341_RS06335	SM00487	DEAD-like helicases superfamily
BB341_RS06335	SM00490	helicase superfamily c-terminal domain
BB341_RS06340	SM01120	BB341_RS06340
BB341_RS06340	SM01121	BB341_RS06340
BB341_RS06370	SM00563	Phosphate acyltransferases
BB341_RS06385	SM00411	bacterial (prokaryotic) histone like domain
BB341_RS06405	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS06450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS06455	SM00960	Roadblock/LC7 domain
BB341_RS06470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS06470	SM00387	Histidine kinase-like ATPases
BB341_RS06475	SM00960	Roadblock/LC7 domain
BB341_RS06505	SM00054	EF-hand, calcium binding motif
BB341_RS06520	SM00867	YceI-like domain 
BB341_RS06525	SM00917	LeuA allosteric (dimerisation) domain
BB341_RS06590	SM00822	BB341_RS06590
BB341_RS06590	SM00823	Phosphopantetheine attachment site
BB341_RS06590	SM00824	Thioesterase
BB341_RS06590	SM00825	Beta-ketoacyl synthase
BB341_RS06590	SM00826	BB341_RS06590
BB341_RS06590	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS06590	SM00829	Enoylreductase
BB341_RS06600	SM00421	helix_turn_helix, Lux Regulon
BB341_RS06610	SM01329	BB341_RS06610
BB341_RS06650	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS06670	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS06680	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS06720	SM00052	Putative diguanylate phosphodiesterase
BB341_RS06720	SM00091	PAS domain
BB341_RS06720	SM00267	diguanylate cyclase
BB341_RS06745	SM00421	helix_turn_helix, Lux Regulon
BB341_RS06770	SM00845	GatB domain
BB341_RS06790	SM00052	Putative diguanylate phosphodiesterase
BB341_RS06790	SM00267	diguanylate cyclase
BB341_RS06795	SM00292	breast cancer carboxy-terminal domain
BB341_RS06795	SM00532	Ligase N family
BB341_RS06805	SM00822	BB341_RS06805
BB341_RS06825	SM00644	BB341_RS06825
BB341_RS06850	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06855	SM00382	ATPases associated with a variety of cellular activities
BB341_RS06935	SM01260	BB341_RS06935
BB341_RS06960	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS06990	SM00421	helix_turn_helix, Lux Regulon
BB341_RS07005	SM00054	EF-hand, calcium binding motif
BB341_RS07045	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07050	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07070	SM00458	Ricin-type beta-trefoil
BB341_RS07075	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07075	SM00710	Parallel beta-helix repeats
BB341_RS07080	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07090	SM00421	helix_turn_helix, Lux Regulon
BB341_RS07090	SM00448	cheY-homologous receiver domain
BB341_RS07100	SM00191	Integrin alpha (beta-propellor repeats).
BB341_RS07110	SM00642	Alpha-amylase domain
BB341_RS07115	SM00642	Alpha-amylase domain
BB341_RS07125	SM00642	Alpha-amylase domain
BB341_RS07145	SM00387	Histidine kinase-like ATPases
BB341_RS07150	SM00448	cheY-homologous receiver domain
BB341_RS07165	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS07245	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS07270	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS07275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS07275	SM00387	Histidine kinase-like ATPases
BB341_RS07275	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS07280	SM00448	cheY-homologous receiver domain
BB341_RS07280	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS07315	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07325	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07385	SM00421	helix_turn_helix, Lux Regulon
BB341_RS07385	SM00448	cheY-homologous receiver domain
BB341_RS07390	SM00060	Fibronectin type 3 domain
BB341_RS07390	SM00636	BB341_RS07390
BB341_RS07390	SM00637	BB341_RS07390
BB341_RS07435	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07450	SM00014	Acid phosphatase homologues
BB341_RS07475	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07525	SM00226	Low molecular weight phosphatase family
BB341_RS07540	SM00937	BB341_RS07540
BB341_RS07555	SM00020	Trypsin-like serine protease
BB341_RS07560	SM00357	Cold shock protein domain
BB341_RS07560	SM00382	ATPases associated with a variety of cellular activities
BB341_RS07560	SM00959	Rho termination factor, N-terminal domain
BB341_RS07585	SM00836	DALR anticodon binding domain
BB341_RS07585	SM01016	Arginyl tRNA synthetase N terminal dom
BB341_RS07590	SM00448	cheY-homologous receiver domain
BB341_RS07610	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BB341_RS07685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS07775	SM01043	Bacterial transcriptional activator domain
BB341_RS07780	SM00849	Metallo-beta-lactamase superfamily
BB341_RS07795	SM00823	Phosphopantetheine attachment site
BB341_RS07795	SM01294	BB341_RS07795
BB341_RS07910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS07910	SM00387	Histidine kinase-like ATPases
BB341_RS07910	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS07915	SM00448	cheY-homologous receiver domain
BB341_RS07915	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS07940	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BB341_RS07960	SM00567	E-Z type HEAT repeats
BB341_RS07980	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS08060	SM00960	Roadblock/LC7 domain
BB341_RS08065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS08065	SM00387	Histidine kinase-like ATPases
BB341_RS08075	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS08075	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS08080	SM00641	Glycosyl hydrolases family 25
BB341_RS08090	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08090	SM00464	Found in ATP-dependent protease La (LON)
BB341_RS08100	SM00448	cheY-homologous receiver domain
BB341_RS08100	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS08105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS08105	SM00387	Histidine kinase-like ATPases
BB341_RS08105	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS08110	SM00861	Transketolase, pyrimidine binding domain
BB341_RS08120	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08155	SM00829	Enoylreductase
BB341_RS08160	SM00919	Malic enzyme, NAD binding domain
BB341_RS08160	SM01274	BB341_RS08160
BB341_RS08165	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS08175	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08265	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB341_RS08275	SM00387	Histidine kinase-like ATPases
BB341_RS08305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS08305	SM00866	BB341_RS08305
BB341_RS08345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS08400	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS08405	SM01060	BB341_RS08405
BB341_RS08420	SM00671	Sel1-like repeats.
BB341_RS08440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS08505	SM00341	Helicase and RNase D C-terminal
BB341_RS08555	SM00450	Rhodanese Homology Domain
BB341_RS08570	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08625	SM00487	DEAD-like helicases superfamily
BB341_RS08625	SM00490	helicase superfamily c-terminal domain
BB341_RS08655	SM00481	DNA polymerase alpha chain like domain
BB341_RS08685	SM00924	MgtE intracellular N domain
BB341_RS08710	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS08815	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08820	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08845	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08850	SM00382	ATPases associated with a variety of cellular activities
BB341_RS08900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS08900	SM00091	PAS domain
BB341_RS08900	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS08920	SM00636	BB341_RS08920
BB341_RS09005	SM00458	Ricin-type beta-trefoil
BB341_RS09020	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS09025	SM01060	BB341_RS09025
BB341_RS09035	SM00244	prohibitin homologues
BB341_RS09050	SM00382	ATPases associated with a variety of cellular activities
BB341_RS09085	SM00670	Large family of predicted nucleotide-binding domains
BB341_RS09140	SM00421	helix_turn_helix, Lux Regulon
BB341_RS09140	SM00448	cheY-homologous receiver domain
BB341_RS09145	SM00387	Histidine kinase-like ATPases
BB341_RS09180	SM00858	BB341_RS09180
BB341_RS09190	SM00060	Fibronectin type 3 domain
BB341_RS09190	SM00636	BB341_RS09190
BB341_RS09195	SM00631	BB341_RS09195
BB341_RS09210	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS09220	SM01119	BB341_RS09220
BB341_RS09410	SM00028	Tetratricopeptide repeats
BB341_RS09435	SM00866	BB341_RS09435
BB341_RS09440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS09440	SM00866	BB341_RS09440
BB341_RS09455	SM00382	ATPases associated with a variety of cellular activities
BB341_RS09465	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS09510	SM00829	Enoylreductase
BB341_RS09530	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS09530	SM00267	diguanylate cyclase
BB341_RS09540	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BB341_RS09565	SM00878	Biotin carboxylase C-terminal domain
BB341_RS09575	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB341_RS09575	SM01134	BB341_RS09575
BB341_RS09620	SM01133	BB341_RS09620
BB341_RS09650	SM00448	cheY-homologous receiver domain
BB341_RS09650	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS09655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS09655	SM00387	Histidine kinase-like ATPases
BB341_RS09655	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS09725	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BB341_RS09745	SM00382	ATPases associated with a variety of cellular activities
BB341_RS09795	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS09935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS09945	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS09965	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS09985	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS10010	SM00798	AICARFT/IMPCHase bienzyme
BB341_RS10010	SM00851	MGS-like domain
BB341_RS10030	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS10035	SM00881	CoA binding domain
BB341_RS10100	SM00421	helix_turn_helix, Lux Regulon
BB341_RS10100	SM00448	cheY-homologous receiver domain
BB341_RS10130	SM00830	Chorismate mutase type II
BB341_RS10150	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS10155	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS10160	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS10170	SM00984	UDP binding domain
BB341_RS10175	SM01240	BB341_RS10175
BB341_RS10180	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS10180	SM01240	BB341_RS10180
BB341_RS10190	SM00421	helix_turn_helix, Lux Regulon
BB341_RS10190	SM00448	cheY-homologous receiver domain
BB341_RS10210	SM00822	BB341_RS10210
BB341_RS10225	SM00883	Chaperonin 10 Kd subunit
BB341_RS10300	SM01005	Alanine racemase, C-terminal domain
BB341_RS10350	SM00382	ATPases associated with a variety of cellular activities
BB341_RS10370	SM00662	RNA polymerases D
BB341_RS10390	SM00316	Ribosomal protein S1-like RNA-binding domain
BB341_RS10450	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB341_RS10455	SM01374	BB341_RS10455
BB341_RS10475	SM00322	K homology RNA-binding domain
BB341_RS10490	SM01382	BB341_RS10490
BB341_RS10490	SM01383	BB341_RS10490
BB341_RS10510	SM01403	BB341_RS10510
BB341_RS10525	SM00838	Elongation factor G C-terminus
BB341_RS10525	SM00889	Elongation factor G, domain IV
BB341_RS10540	SM00663	RNA polymerase I subunit A N-terminus
BB341_RS10565	SM00649	Ribosomal protein L11/L12
BB341_RS10570	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BB341_RS10570	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB341_RS10635	SM00871	Bacterial transcription activator, effector binding domain
BB341_RS10730	SM00421	helix_turn_helix, Lux Regulon
BB341_RS10730	SM00448	cheY-homologous receiver domain
BB341_RS10790	SM00382	ATPases associated with a variety of cellular activities
BB341_RS10800	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BB341_RS10810	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB341_RS10855	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BB341_RS10855	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BB341_RS10860	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BB341_RS10930	SM00357	Cold shock protein domain
BB341_RS10955	SM00344	helix_turn_helix ASNC type
BB341_RS11000	SM00855	Phosphoglycerate mutase family
BB341_RS11035	SM00822	BB341_RS11035
BB341_RS11115	SM00836	DALR anticodon binding domain
BB341_RS11115	SM01016	Arginyl tRNA synthetase N terminal dom
BB341_RS11135	SM01004	Delta-aminolevulinic acid dehydratase
BB341_RS11160	SM00421	helix_turn_helix, Lux Regulon
BB341_RS11205	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS11240	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS11250	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS11250	SM00419	helix_turn_helix, cAMP Regulatory protein
BB341_RS11260	SM00481	DNA polymerase alpha chain like domain
BB341_RS11270	SM00382	ATPases associated with a variety of cellular activities
BB341_RS11330	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS11345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS11355	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS11355	SM00564	beta-propeller repeat
BB341_RS11375	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS11420	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS11435	SM00881	CoA binding domain
BB341_RS11465	SM01005	Alanine racemase, C-terminal domain
BB341_RS11475	SM00903	Flavin reductase like domain
BB341_RS11485	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS11490	SM00829	Enoylreductase
BB341_RS11500	SM00822	BB341_RS11500
BB341_RS11540	SM00054	EF-hand, calcium binding motif
BB341_RS11585	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BB341_RS11590	SM00382	ATPases associated with a variety of cellular activities
BB341_RS11610	SM00529	Helix-turn-helix diphteria tox regulatory element
BB341_RS11610	SM00899	BB341_RS11610
BB341_RS11620	SM00091	PAS domain
BB341_RS11655	SM00878	Biotin carboxylase C-terminal domain
BB341_RS11675	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS11745	SM00960	Roadblock/LC7 domain
BB341_RS11760	SM00028	Tetratricopeptide repeats
BB341_RS11760	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS11760	SM01043	Bacterial transcriptional activator domain
BB341_RS11800	SM00382	ATPases associated with a variety of cellular activities
BB341_RS11850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS11850	SM00387	Histidine kinase-like ATPases
BB341_RS11850	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS11855	SM00448	cheY-homologous receiver domain
BB341_RS11855	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS11895	SM00382	ATPases associated with a variety of cellular activities
BB341_RS11930	SM00028	Tetratricopeptide repeats
BB341_RS11955	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS11985	SM00382	ATPases associated with a variety of cellular activities
BB341_RS12030	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS12090	SM00357	Cold shock protein domain
BB341_RS12125	SM00487	DEAD-like helicases superfamily
BB341_RS12125	SM00490	helicase superfamily c-terminal domain
BB341_RS12170	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS12240	SM00830	Chorismate mutase type II
BB341_RS12260	SM00421	helix_turn_helix, Lux Regulon
BB341_RS12260	SM00448	cheY-homologous receiver domain
BB341_RS12265	SM00387	Histidine kinase-like ATPases
BB341_RS12290	SM00903	Flavin reductase like domain
BB341_RS12295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS12295	SM00091	PAS domain
BB341_RS12295	SM00267	diguanylate cyclase
BB341_RS12370	SM00357	Cold shock protein domain
BB341_RS12405	SM00829	Enoylreductase
BB341_RS12440	SM00382	ATPases associated with a variety of cellular activities
BB341_RS12460	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB341_RS12465	SM00840	BB341_RS12465
BB341_RS12485	SM01058	CarD-like/TRCF domain
BB341_RS12495	SM00448	cheY-homologous receiver domain
BB341_RS12495	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS12500	SM00387	Histidine kinase-like ATPases
BB341_RS12500	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS12510	SM00855	Phosphoglycerate mutase family
BB341_RS12555	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS12555	SM00448	cheY-homologous receiver domain
BB341_RS12570	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS12575	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS12635	SM00450	Rhodanese Homology Domain
BB341_RS12660	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS12665	SM00354	helix_turn _helix lactose operon repressor
BB341_RS12675	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
BB341_RS12685	SM00448	cheY-homologous receiver domain
BB341_RS12685	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS12690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS12690	SM00387	Histidine kinase-like ATPases
BB341_RS12690	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS12700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS12700	SM00866	BB341_RS12700
BB341_RS12705	SM00148	Phospholipase C, catalytic domain (part); domain X
BB341_RS12740	SM00880	BB341_RS12740
BB341_RS12765	SM00382	ATPases associated with a variety of cellular activities
BB341_RS12795	SM00014	Acid phosphatase homologues
BB341_RS12855	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS12865	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS12880	SM00776	BB341_RS12880
BB341_RS12915	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS12925	SM00422	helix_turn_helix, mercury resistance
BB341_RS12975	SM00487	DEAD-like helicases superfamily
BB341_RS12975	SM00490	helicase superfamily c-terminal domain
BB341_RS13040	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13040	SM00487	DEAD-like helicases superfamily
BB341_RS13040	SM00490	helicase superfamily c-terminal domain
BB341_RS13040	SM00847	Helicase associated domain (HA2)  Add an annotation
BB341_RS13060	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BB341_RS13105	SM01211	BB341_RS13105
BB341_RS13130	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13145	SM00421	helix_turn_helix, Lux Regulon
BB341_RS13145	SM00448	cheY-homologous receiver domain
BB341_RS13170	SM01209	BB341_RS13170
BB341_RS13170	SM01210	BB341_RS13170
BB341_RS13175	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13215	SM00562	BB341_RS13215
BB341_RS13265	SM00320	WD40 repeats
BB341_RS13280	SM00028	Tetratricopeptide repeats
BB341_RS13280	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS13280	SM01043	Bacterial transcriptional activator domain
BB341_RS13315	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS13325	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13325	SM01086	C-terminal, D2-small domain, of ClpB protein
BB341_RS13335	SM00953	BB341_RS13335
BB341_RS13355	SM00421	helix_turn_helix, Lux Regulon
BB341_RS13430	SM00886	Stress responsive A/B Barrel Domain
BB341_RS13450	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS13465	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS13480	SM00363	S4 RNA-binding domain
BB341_RS13490	SM00327	von Willebrand factor (vWF) type A domain
BB341_RS13495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS13495	SM00387	Histidine kinase-like ATPases
BB341_RS13495	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS13500	SM00448	cheY-homologous receiver domain
BB341_RS13500	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS13530	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS13530	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS13585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS13585	SM00895	BB341_RS13585
BB341_RS13600	SM00861	Transketolase, pyrimidine binding domain
BB341_RS13610	SM00421	helix_turn_helix, Lux Regulon
BB341_RS13610	SM00448	cheY-homologous receiver domain
BB341_RS13625	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS13630	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS13645	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13660	SM00829	Enoylreductase
BB341_RS13675	SM00852	Probable molybdopterin binding domain
BB341_RS13690	SM00861	Transketolase, pyrimidine binding domain
BB341_RS13700	SM00344	helix_turn_helix ASNC type
BB341_RS13725	SM00752	Horizontally Transferred TransMembrane Domain
BB341_RS13765	SM00450	Rhodanese Homology Domain
BB341_RS13780	SM00421	helix_turn_helix, Lux Regulon
BB341_RS13780	SM00448	cheY-homologous receiver domain
BB341_RS13810	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13825	SM00240	Forkhead associated domain
BB341_RS13830	SM00240	Forkhead associated domain
BB341_RS13835	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS13835	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BB341_RS13850	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS13850	SM00740	BB341_RS13850
BB341_RS13925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS13935	SM00382	ATPases associated with a variety of cellular activities
BB341_RS13935	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS13935	SM01043	Bacterial transcriptional activator domain
BB341_RS13940	SM00903	Flavin reductase like domain
BB341_RS13985	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS14000	SM00434	DNA Topoisomerase IV
BB341_RS14005	SM00387	Histidine kinase-like ATPases
BB341_RS14005	SM00433	TopoisomeraseII
BB341_RS14020	SM01350	BB341_RS14020
BB341_RS14025	SM00480	DNA polymerase III beta subunit
BB341_RS14030	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14030	SM00760	Bacterial dnaA protein helix-turn-helix domain
BB341_RS14040	SM01234	BB341_RS14040
BB341_RS14050	SM00393	Putative single-stranded nucleic acids-binding domain
BB341_RS14065	SM00470	ParB-like nuclease domain
BB341_RS14110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS14180	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14195	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS14230	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS14260	SM00354	helix_turn _helix lactose operon repressor
BB341_RS14280	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14285	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS14285	SM00387	Histidine kinase-like ATPases
BB341_RS14295	SM00822	BB341_RS14295
BB341_RS14300	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14310	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14385	SM01011	Aminopeptidase P, N-terminal domain
BB341_RS14390	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS14395	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BB341_RS14415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS14435	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14445	SM00481	DNA polymerase alpha chain like domain
BB341_RS14485	SM00091	PAS domain
BB341_RS14515	SM00448	cheY-homologous receiver domain
BB341_RS14515	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS14545	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14555	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS14555	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BB341_RS14555	SM00422	helix_turn_helix, mercury resistance
BB341_RS14560	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14565	SM00382	ATPases associated with a variety of cellular activities
BB341_RS14605	SM00776	BB341_RS14605
BB341_RS14610	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14670	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14715	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14840	SM01101	BB341_RS14840
BB341_RS14855	SM00054	EF-hand, calcium binding motif
BB341_RS14860	SM00421	helix_turn_helix, Lux Regulon
BB341_RS14860	SM00448	cheY-homologous receiver domain
BB341_RS14865	SM00387	Histidine kinase-like ATPases
BB341_RS14910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS14910	SM00866	BB341_RS14910
BB341_RS14950	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS14960	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS14960	SM01043	Bacterial transcriptional activator domain
BB341_RS14990	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS15055	SM00382	ATPases associated with a variety of cellular activities
BB341_RS15065	SM00421	helix_turn_helix, Lux Regulon
BB341_RS15065	SM00448	cheY-homologous receiver domain
BB341_RS15090	SM00894	Excalibur calcium-binding domain
BB341_RS15095	SM00060	Fibronectin type 3 domain
BB341_RS15095	SM00758	BB341_RS15095
BB341_RS15105	SM00984	UDP binding domain
BB341_RS15115	SM00855	Phosphoglycerate mutase family
BB341_RS15145	SM00320	WD40 repeats
BB341_RS15200	SM00271	DnaJ molecular chaperone homology domain
BB341_RS15205	SM00422	helix_turn_helix, mercury resistance
BB341_RS15210	SM00421	helix_turn_helix, Lux Regulon
BB341_RS15225	SM00382	ATPases associated with a variety of cellular activities
BB341_RS15225	SM01086	C-terminal, D2-small domain, of ClpB protein
BB341_RS15315	SM00421	helix_turn_helix, Lux Regulon
BB341_RS15315	SM00448	cheY-homologous receiver domain
BB341_RS15330	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS15335	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS15355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS15370	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS15410	SM00788	Adenylosuccinate synthetase
BB341_RS15430	SM00493	BB341_RS15430
BB341_RS15445	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB341_RS15545	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS15595	SM00255	Toll - interleukin 1 - resistance
BB341_RS15670	SM00060	Fibronectin type 3 domain
BB341_RS15670	SM00606	Cellulose Binding Domain Type IV
BB341_RS15680	SM00849	Metallo-beta-lactamase superfamily
BB341_RS15685	SM00100	Cyclic nucleotide-monophosphate binding domain
BB341_RS15685	SM00419	helix_turn_helix, cAMP Regulatory protein
BB341_RS15690	SM00478	endonuclease III
BB341_RS15690	SM00525	BB341_RS15690
BB341_RS15730	SM00947	Carbonic anhydrase
BB341_RS15780	SM00487	DEAD-like helicases superfamily
BB341_RS15780	SM00490	helicase superfamily c-terminal domain
BB341_RS15815	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BB341_RS15815	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BB341_RS15815	SM00493	BB341_RS15815
BB341_RS15880	SM00487	DEAD-like helicases superfamily
BB341_RS15880	SM00490	helicase superfamily c-terminal domain
BB341_RS15895	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16125	SM01260	BB341_RS16125
BB341_RS16180	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS16200	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS16245	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16250	SM00482	DNA polymerase A domain
BB341_RS16255	SM01266	BB341_RS16255
BB341_RS16290	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS16355	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16375	SM00905	Dihydroneopterin aldolase
BB341_RS16390	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16430	SM00421	helix_turn_helix, Lux Regulon
BB341_RS16430	SM00448	cheY-homologous receiver domain
BB341_RS16435	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS16490	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16490	SM01086	C-terminal, D2-small domain, of ClpB protein
BB341_RS16510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS16510	SM00387	Histidine kinase-like ATPases
BB341_RS16510	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS16515	SM00448	cheY-homologous receiver domain
BB341_RS16515	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS16530	SM00478	endonuclease III
BB341_RS16530	SM00525	BB341_RS16530
BB341_RS16535	SM00014	Acid phosphatase homologues
BB341_RS16550	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16580	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS16580	SM00564	beta-propeller repeat
BB341_RS16655	SM00563	Phosphate acyltransferases
BB341_RS16680	SM00881	CoA binding domain
BB341_RS16720	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS16815	SM00852	Probable molybdopterin binding domain
BB341_RS16825	SM00852	Probable molybdopterin binding domain
BB341_RS16845	SM00822	BB341_RS16845
BB341_RS16870	SM00422	helix_turn_helix, mercury resistance
BB341_RS16885	SM00822	BB341_RS16885
BB341_RS16890	SM00245	tail specific protease
BB341_RS16920	SM00382	ATPases associated with a variety of cellular activities
BB341_RS16950	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS16995	SM00823	Phosphopantetheine attachment site
BB341_RS16995	SM00824	Thioesterase
BB341_RS17050	SM01208	BB341_RS17050
BB341_RS17055	SM00650	Ribosomal RNA adenine dimethylases
BB341_RS17065	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS17085	SM00382	ATPases associated with a variety of cellular activities
BB341_RS17100	SM00421	helix_turn_helix, Lux Regulon
BB341_RS17120	SM00421	helix_turn_helix, Lux Regulon
BB341_RS17120	SM00448	cheY-homologous receiver domain
BB341_RS17125	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS17165	SM01400	BB341_RS17165
BB341_RS17195	SM00860	SMI1 / KNR4 family
BB341_RS17225	SM00382	ATPases associated with a variety of cellular activities
BB341_RS17240	SM00487	DEAD-like helicases superfamily
BB341_RS17240	SM00490	helicase superfamily c-terminal domain
BB341_RS17240	SM00982	BB341_RS17240
BB341_RS17240	SM01058	CarD-like/TRCF domain
BB341_RS17260	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS17265	SM00191	Integrin alpha (beta-propellor repeats).
BB341_RS17290	SM00257	Lysin motif
BB341_RS17295	SM00257	Lysin motif
BB341_RS17300	SM01192	BB341_RS17300
BB341_RS17300	SM01193	BB341_RS17300
BB341_RS17335	SM00382	ATPases associated with a variety of cellular activities
BB341_RS17375	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS17400	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS17415	SM01022	BB341_RS17415
BB341_RS17490	SM00960	Roadblock/LC7 domain
BB341_RS17495	SM00387	Histidine kinase-like ATPases
BB341_RS17535	SM00448	cheY-homologous receiver domain
BB341_RS17535	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS17540	SM00387	Histidine kinase-like ATPases
BB341_RS17540	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS17555	SM01001	AIR carboxylase
BB341_RS17575	SM00984	UDP binding domain
BB341_RS17645	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS17700	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BB341_RS17780	SM00996	S-adenosyl-L-homocysteine hydrolase
BB341_RS17780	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BB341_RS17820	SM00448	cheY-homologous receiver domain
BB341_RS17820	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS17825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS17825	SM00387	Histidine kinase-like ATPases
BB341_RS17825	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS17830	SM00909	Sporulation and spore germination
BB341_RS17845	SM00421	helix_turn_helix, Lux Regulon
BB341_RS17845	SM00448	cheY-homologous receiver domain
BB341_RS17860	SM00957	SecA DEAD-like domain
BB341_RS17860	SM00958	SecA preprotein cross-linking domain
BB341_RS17910	SM00240	Forkhead associated domain
BB341_RS17910	SM00382	ATPases associated with a variety of cellular activities
BB341_RS17915	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS17920	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS17925	SM00937	BB341_RS17925
BB341_RS17935	SM00382	ATPases associated with a variety of cellular activities
BB341_RS17945	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS17945	SM00245	tail specific protease
BB341_RS17995	SM00919	Malic enzyme, NAD binding domain
BB341_RS17995	SM01274	BB341_RS17995
BB341_RS18000	SM00411	bacterial (prokaryotic) histone like domain
BB341_RS18050	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BB341_RS18080	SM00487	DEAD-like helicases superfamily
BB341_RS18085	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS18095	SM00344	helix_turn_helix ASNC type
BB341_RS18105	SM00448	cheY-homologous receiver domain
BB341_RS18105	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS18110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS18110	SM00387	Histidine kinase-like ATPases
BB341_RS18110	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS18125	SM00028	Tetratricopeptide repeats
BB341_RS18195	SM00232	JAB/MPN domain
BB341_RS18210	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18225	SM00849	Metallo-beta-lactamase superfamily
BB341_RS18270	SM00507	HNH nucleases
BB341_RS18285	SM00883	Chaperonin 10 Kd subunit
BB341_RS18310	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18325	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
BB341_RS18335	SM00487	DEAD-like helicases superfamily
BB341_RS18335	SM00490	helicase superfamily c-terminal domain
BB341_RS18415	SM00244	prohibitin homologues
BB341_RS18430	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS18435	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18450	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS18470	SM00495	Chitin-binding domain type 3
BB341_RS18470	SM00636	BB341_RS18470
BB341_RS18475	SM00052	Putative diguanylate phosphodiesterase
BB341_RS18475	SM00091	PAS domain
BB341_RS18475	SM00267	diguanylate cyclase
BB341_RS18500	SM00855	Phosphoglycerate mutase family
BB341_RS18540	SM00448	cheY-homologous receiver domain
BB341_RS18540	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS18545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS18545	SM00387	Histidine kinase-like ATPases
BB341_RS18545	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS18555	SM00479	BB341_RS18555
BB341_RS18560	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS18595	SM01006	Siderophore biosynthesis protein domain
BB341_RS18625	SM00878	Biotin carboxylase C-terminal domain
BB341_RS18695	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18735	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18760	SM00458	Ricin-type beta-trefoil
BB341_RS18770	SM00354	helix_turn _helix lactose operon repressor
BB341_RS18860	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18860	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB341_RS18880	SM00829	Enoylreductase
BB341_RS18900	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS18905	SM00382	ATPases associated with a variety of cellular activities
BB341_RS18915	SM00562	BB341_RS18915
BB341_RS18920	SM00421	helix_turn_helix, Lux Regulon
BB341_RS18930	SM01118	BB341_RS18930
BB341_RS18955	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BB341_RS18990	SM00855	Phosphoglycerate mutase family
BB341_RS19000	SM00822	BB341_RS19000
BB341_RS19005	SM00364	Leucine-rich repeats, bacterial type
BB341_RS19005	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BB341_RS19015	SM00710	Parallel beta-helix repeats
BB341_RS19015	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BB341_RS19035	SM00487	DEAD-like helicases superfamily
BB341_RS19085	SM00382	ATPases associated with a variety of cellular activities
BB341_RS19125	SM00240	Forkhead associated domain
BB341_RS19130	SM00327	von Willebrand factor (vWF) type A domain
BB341_RS19135	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS19135	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BB341_RS19140	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS19150	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS19185	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS19200	SM00507	HNH nucleases
BB341_RS19230	SM00960	Roadblock/LC7 domain
BB341_RS19235	SM00387	Histidine kinase-like ATPases
BB341_RS19250	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB341_RS19290	SM00855	Phosphoglycerate mutase family
BB341_RS19315	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB341_RS19315	SM01232	BB341_RS19315
BB341_RS19325	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS19330	SM00422	helix_turn_helix, mercury resistance
BB341_RS19330	SM00871	Bacterial transcription activator, effector binding domain
BB341_RS19390	SM00382	ATPases associated with a variety of cellular activities
BB341_RS19390	SM00994	ClpX C4-type zinc finger
BB341_RS19390	SM01086	C-terminal, D2-small domain, of ClpB protein
BB341_RS19420	SM00562	BB341_RS19420
BB341_RS19450	SM00880	BB341_RS19450
BB341_RS19450	SM01118	BB341_RS19450
BB341_RS19455	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS19465	SM00316	Ribosomal protein S1-like RNA-binding domain
BB341_RS19505	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BB341_RS19550	SM00855	Phosphoglycerate mutase family
BB341_RS19615	SM00838	Elongation factor G C-terminus
BB341_RS19625	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS19635	SM00849	Metallo-beta-lactamase superfamily
BB341_RS19645	SM00271	DnaJ molecular chaperone homology domain
BB341_RS19665	SM00245	tail specific protease
BB341_RS19700	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS19700	SM01091	Transporter associated domain
BB341_RS19750	SM00917	LeuA allosteric (dimerisation) domain
BB341_RS19785	SM00382	ATPases associated with a variety of cellular activities
BB341_RS19815	SM00706	Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
BB341_RS19820	SM00421	helix_turn_helix, Lux Regulon
BB341_RS19840	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS19910	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS19920	SM00400	zinc finger
BB341_RS19920	SM00493	BB341_RS19920
BB341_RS19920	SM00766	DNA primase DnaG DnaB-binding
BB341_RS19930	SM00382	ATPases associated with a variety of cellular activities
BB341_RS19935	SM00382	ATPases associated with a variety of cellular activities
BB341_RS19975	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20020	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20040	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20060	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS20075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS20090	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS20095	SM00829	Enoylreductase
BB341_RS20100	SM00631	BB341_RS20100
BB341_RS20130	SM00825	Beta-ketoacyl synthase
BB341_RS20145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS20165	SM00422	helix_turn_helix, mercury resistance
BB341_RS20175	SM00421	helix_turn_helix, Lux Regulon
BB341_RS20175	SM00448	cheY-homologous receiver domain
BB341_RS20270	SM00834	Putative regulatory protein
BB341_RS20305	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS20420	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20440	SM00849	Metallo-beta-lactamase superfamily
BB341_RS20480	SM00020	Trypsin-like serine protease
BB341_RS20505	SM00421	helix_turn_helix, Lux Regulon
BB341_RS20505	SM00448	cheY-homologous receiver domain
BB341_RS20520	SM00829	Enoylreductase
BB341_RS20525	SM00822	BB341_RS20525
BB341_RS20545	SM00855	Phosphoglycerate mutase family
BB341_RS20560	SM00955	BB341_RS20560
BB341_RS20570	SM00422	helix_turn_helix, mercury resistance
BB341_RS20590	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB341_RS20590	SM01134	BB341_RS20590
BB341_RS20610	SM00829	Enoylreductase
BB341_RS20625	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS20680	SM00943	Bifunctional DNA primase/polymerase, N-terminal
BB341_RS20690	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20755	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS20755	SM01043	Bacterial transcriptional activator domain
BB341_RS20765	SM00382	ATPases associated with a variety of cellular activities
BB341_RS20800	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS20820	SM01230	BB341_RS20820
BB341_RS20905	SM00354	helix_turn _helix lactose operon repressor
BB341_RS20910	SM00642	Alpha-amylase domain
BB341_RS20930	SM00632	BB341_RS20930
BB341_RS20930	SM00642	Alpha-amylase domain
BB341_RS20935	SM00642	Alpha-amylase domain
BB341_RS20950	SM00421	helix_turn_helix, Lux Regulon
BB341_RS20950	SM00448	cheY-homologous receiver domain
BB341_RS20955	SM00387	Histidine kinase-like ATPases
BB341_RS20970	SM00822	BB341_RS20970
BB341_RS20990	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS20995	SM01230	BB341_RS20995
BB341_RS21050	SM01230	BB341_RS21050
BB341_RS21070	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS21115	SM00422	helix_turn_helix, mercury resistance
BB341_RS21115	SM00871	Bacterial transcription activator, effector binding domain
BB341_RS21125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS21125	SM00895	BB341_RS21125
BB341_RS21180	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB341_RS21185	SM00382	ATPases associated with a variety of cellular activities
BB341_RS21215	SM00421	helix_turn_helix, Lux Regulon
BB341_RS21215	SM00448	cheY-homologous receiver domain
BB341_RS21325	SM00448	cheY-homologous receiver domain
BB341_RS21325	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS21330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS21330	SM00387	Histidine kinase-like ATPases
BB341_RS21330	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS21435	SM00563	Phosphate acyltransferases
BB341_RS21440	SM00387	Histidine kinase-like ATPases
BB341_RS21445	SM00421	helix_turn_helix, Lux Regulon
BB341_RS21445	SM00448	cheY-homologous receiver domain
BB341_RS21480	SM00518	AP endonuclease family 2
BB341_RS21485	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS21485	SM00740	BB341_RS21485
BB341_RS21575	SM00460	Transglutaminase/protease-like homologues
BB341_RS21595	SM00947	Carbonic anhydrase
BB341_RS21650	SM00864	Tubulin/FtsZ family, GTPase domain
BB341_RS21650	SM00865	Tubulin/FtsZ family, C-terminal domain
BB341_RS21710	SM00822	BB341_RS21710
BB341_RS21745	SM00481	DNA polymerase alpha chain like domain
BB341_RS21755	SM00382	ATPases associated with a variety of cellular activities
BB341_RS21775	SM00464	Found in ATP-dependent protease La (LON)
BB341_RS21990	SM00882	Coenzyme A transferase
BB341_RS21995	SM00882	Coenzyme A transferase
BB341_RS22010	SM00822	BB341_RS22010
BB341_RS22020	SM00020	Trypsin-like serine protease
BB341_RS22035	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS22040	SM00830	Chorismate mutase type II
BB341_RS22045	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
BB341_RS22085	SM00448	cheY-homologous receiver domain
BB341_RS22085	SM01012	BB341_RS22085
BB341_RS22090	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22095	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22125	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BB341_RS22125	SM00474	3'-5' exonuclease
BB341_RS22125	SM00475	5'-3' exonuclease
BB341_RS22125	SM00482	DNA polymerase A domain
BB341_RS22140	SM00487	DEAD-like helicases superfamily
BB341_RS22140	SM00490	helicase superfamily c-terminal domain
BB341_RS22140	SM00847	Helicase associated domain (HA2)  Add an annotation
BB341_RS22150	SM00316	Ribosomal protein S1-like RNA-binding domain
BB341_RS22180	SM00244	prohibitin homologues
BB341_RS22185	SM00487	DEAD-like helicases superfamily
BB341_RS22185	SM00490	helicase superfamily c-terminal domain
BB341_RS22240	SM00487	DEAD-like helicases superfamily
BB341_RS22240	SM00490	helicase superfamily c-terminal domain
BB341_RS22260	SM00849	Metallo-beta-lactamase superfamily
BB341_RS22300	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB341_RS22300	SM00465	GIY-YIG type nucleases (URI domain)
BB341_RS22320	SM00631	BB341_RS22320
BB341_RS22325	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB341_RS22385	SM00861	Transketolase, pyrimidine binding domain
BB341_RS22420	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22445	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22475	SM01130	BB341_RS22475
BB341_RS22495	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS22525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS22525	SM00387	Histidine kinase-like ATPases
BB341_RS22525	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS22530	SM00448	cheY-homologous receiver domain
BB341_RS22530	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS22545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS22545	SM00895	BB341_RS22545
BB341_RS22565	SM01130	BB341_RS22565
BB341_RS22575	SM01130	BB341_RS22575
BB341_RS22590	SM00421	helix_turn_helix, Lux Regulon
BB341_RS22590	SM00448	cheY-homologous receiver domain
BB341_RS22600	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS22620	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS22695	SM00327	von Willebrand factor (vWF) type A domain
BB341_RS22695	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22720	SM01007	Class II Aldolase and Adducin N-terminal domain
BB341_RS22735	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22800	SM00292	breast cancer carboxy-terminal domain
BB341_RS22800	SM00479	BB341_RS22800
BB341_RS22835	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS22855	SM00363	S4 RNA-binding domain
BB341_RS22870	SM00822	BB341_RS22870
BB341_RS22880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS22880	SM00895	BB341_RS22880
BB341_RS22895	SM00855	Phosphoglycerate mutase family
BB341_RS22905	SM00240	Forkhead associated domain
BB341_RS22905	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS22925	SM00387	Histidine kinase-like ATPases
BB341_RS22930	SM00421	helix_turn_helix, Lux Regulon
BB341_RS22930	SM00448	cheY-homologous receiver domain
BB341_RS22945	SM00382	ATPases associated with a variety of cellular activities
BB341_RS22955	SM00244	prohibitin homologues
BB341_RS22965	SM00507	HNH nucleases
BB341_RS23020	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23035	SM00363	S4 RNA-binding domain
BB341_RS23075	SM00028	Tetratricopeptide repeats
BB341_RS23080	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BB341_RS23080	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BB341_RS23105	SM00363	S4 RNA-binding domain
BB341_RS23140	SM00563	Phosphate acyltransferases
BB341_RS23145	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23160	SM00257	Lysin motif
BB341_RS23180	SM00014	Acid phosphatase homologues
BB341_RS23285	SM00448	cheY-homologous receiver domain
BB341_RS23310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23315	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23335	SM00866	BB341_RS23335
BB341_RS23360	SM00422	helix_turn_helix, mercury resistance
BB341_RS23435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23435	SM00895	BB341_RS23435
BB341_RS23450	SM00829	Enoylreductase
BB341_RS23455	SM00849	Metallo-beta-lactamase superfamily
BB341_RS23520	SM00855	Phosphoglycerate mutase family
BB341_RS23545	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BB341_RS23560	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23570	SM00895	BB341_RS23570
BB341_RS23590	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS23595	SM01018	B12 binding domain
BB341_RS23615	SM00421	helix_turn_helix, Lux Regulon
BB341_RS23615	SM00448	cheY-homologous receiver domain
BB341_RS23645	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23670	SM00354	helix_turn _helix lactose operon repressor
BB341_RS23725	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB341_RS23730	SM00487	DEAD-like helicases superfamily
BB341_RS23730	SM00490	helicase superfamily c-terminal domain
BB341_RS23730	SM01142	BB341_RS23730
BB341_RS23745	SM00422	helix_turn_helix, mercury resistance
BB341_RS23755	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BB341_RS23755	SM00475	5'-3' exonuclease
BB341_RS23760	SM00382	ATPases associated with a variety of cellular activities
BB341_RS23770	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS23790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23790	SM00895	BB341_RS23790
BB341_RS23795	SM01230	BB341_RS23795
BB341_RS23855	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB341_RS23860	SM00387	Histidine kinase-like ATPases
BB341_RS23860	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS23870	SM00873	B3/4 domain
BB341_RS23870	SM00874	tRNA synthetase B5 domain
BB341_RS23870	SM00896	Ferredoxin-fold anticodon binding domain
BB341_RS23905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS23940	SM00421	helix_turn_helix, Lux Regulon
BB341_RS23940	SM00448	cheY-homologous receiver domain
BB341_RS23945	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB341_RS23990	SM00563	Phosphate acyltransferases
BB341_RS24015	SM00382	ATPases associated with a variety of cellular activities
BB341_RS24015	SM00930	BB341_RS24015
BB341_RS24055	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS24145	SM00479	BB341_RS24145
BB341_RS24150	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB341_RS24170	SM00838	Elongation factor G C-terminus
BB341_RS24170	SM00889	Elongation factor G, domain IV
BB341_RS24215	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB341_RS24220	SM00382	ATPases associated with a variety of cellular activities
BB341_RS24225	SM01323	BB341_RS24225
BB341_RS24245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB341_RS24245	SM00954	Region found in RelA / SpoT proteins
BB341_RS24265	SM00849	Metallo-beta-lactamase superfamily
BB341_RS24275	SM00756	BB341_RS24275
BB341_RS24280	SM00382	ATPases associated with a variety of cellular activities
BB341_RS24290	SM00363	S4 RNA-binding domain
BB341_RS24290	SM01390	BB341_RS24290
BB341_RS24305	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB341_RS24310	SM00732	Likely ribonuclease with RNase H fold.
BB341_RS24355	SM00841	Elongation factor P, C-terminal
BB341_RS24355	SM01185	BB341_RS24355
BB341_RS24365	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS24390	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BB341_RS24395	SM00851	MGS-like domain
BB341_RS24395	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BB341_RS24405	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BB341_RS24415	SM00072	Guanylate kinase homologues.
BB341_RS24420	SM01409	BB341_RS24420
BB341_RS24465	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS24485	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS24485	SM01240	BB341_RS24485
BB341_RS24495	SM00344	helix_turn_helix ASNC type
BB341_RS24575	SM01091	Transporter associated domain
BB341_RS24580	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS24585	SM00382	ATPases associated with a variety of cellular activities
BB341_RS24615	SM00344	helix_turn_helix ASNC type
BB341_RS24655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS24670	SM00248	ankyrin repeats
BB341_RS24685	SM00797	Allophanate hydrolase subunit 2
BB341_RS24690	SM00796	Allophanate hydrolase subunit 1
BB341_RS24705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS24705	SM00895	BB341_RS24705
BB341_RS24730	SM00387	Histidine kinase-like ATPases
BB341_RS24735	SM00960	Roadblock/LC7 domain
BB341_RS24840	SM00240	Forkhead associated domain
BB341_RS24845	SM00422	helix_turn_helix, mercury resistance
BB341_RS24855	SM00422	helix_turn_helix, mercury resistance
BB341_RS24930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS24975	SM00822	BB341_RS24975
BB341_RS24990	SM00986	Uracil DNA glycosylase superfamily
BB341_RS24990	SM00987	UreE urease accessory protein, C-terminal domain 
BB341_RS25090	SM00960	Roadblock/LC7 domain
BB341_RS25095	SM00387	Histidine kinase-like ATPases
BB341_RS25105	SM00881	CoA binding domain
BB341_RS25120	SM00248	ankyrin repeats
BB341_RS25165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS25180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB341_RS25180	SM00866	BB341_RS25180
BB341_RS25190	SM00986	Uracil DNA glycosylase superfamily
BB341_RS25190	SM00987	UreE urease accessory protein, C-terminal domain 
BB341_RS25195	SM00998	Adenylosuccinate lyase C-terminus
BB341_RS25210	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB341_RS25215	SM01091	Transporter associated domain
BB341_RS25240	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS25240	SM00876	Biotin and Thiamin Synthesis associated domain
BB341_RS25305	SM00563	Phosphate acyltransferases
BB341_RS25370	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS25375	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS25400	SM00487	DEAD-like helicases superfamily
BB341_RS25400	SM00490	helicase superfamily c-terminal domain
BB341_RS25415	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25460	SM00823	Phosphopantetheine attachment site
BB341_RS25490	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS25490	SM01043	Bacterial transcriptional activator domain
BB341_RS25515	SM00421	helix_turn_helix, Lux Regulon
BB341_RS25515	SM00448	cheY-homologous receiver domain
BB341_RS25565	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25565	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS25565	SM01043	Bacterial transcriptional activator domain
BB341_RS25605	SM00825	Beta-ketoacyl synthase
BB341_RS25605	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS25610	SM00823	Phosphopantetheine attachment site
BB341_RS25610	SM01294	BB341_RS25610
BB341_RS25640	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25650	SM01150	BB341_RS25650
BB341_RS25725	SM00829	Enoylreductase
BB341_RS25765	SM00028	Tetratricopeptide repeats
BB341_RS25765	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS25770	SM00487	DEAD-like helicases superfamily
BB341_RS25770	SM00490	helicase superfamily c-terminal domain
BB341_RS25800	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS25825	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25830	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25835	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25845	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25865	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25865	SM00710	Parallel beta-helix repeats
BB341_RS25875	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25925	SM00458	Ricin-type beta-trefoil
BB341_RS25930	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS25930	SM01043	Bacterial transcriptional activator domain
BB341_RS25935	SM00487	DEAD-like helicases superfamily
BB341_RS25935	SM00490	helicase superfamily c-terminal domain
BB341_RS25940	SM00357	Cold shock protein domain
BB341_RS25960	SM00344	helix_turn_helix ASNC type
BB341_RS25970	SM00382	ATPases associated with a variety of cellular activities
BB341_RS25985	SM00448	cheY-homologous receiver domain
BB341_RS25985	SM00862	Transcriptional regulatory protein, C terminal
BB341_RS25990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS25990	SM00387	Histidine kinase-like ATPases
BB341_RS25990	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS26015	SM00458	Ricin-type beta-trefoil
BB341_RS26025	SM00387	Histidine kinase-like ATPases
BB341_RS26050	SM00382	ATPases associated with a variety of cellular activities
BB341_RS26060	SM00382	ATPases associated with a variety of cellular activities
BB341_RS26175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB341_RS26235	SM00986	Uracil DNA glycosylase superfamily
BB341_RS26235	SM00987	UreE urease accessory protein, C-terminal domain 
BB341_RS26265	SM00014	Acid phosphatase homologues
BB341_RS26310	SM00563	Phosphate acyltransferases
BB341_RS26315	SM00893	Electron transfer flavoprotein domain
BB341_RS26320	SM00893	Electron transfer flavoprotein domain
BB341_RS26330	SM00354	helix_turn _helix lactose operon repressor
BB341_RS26340	SM00776	BB341_RS26340
BB341_RS26365	SM00849	Metallo-beta-lactamase superfamily
BB341_RS26420	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB341_RS26420	SM01134	BB341_RS26420
BB341_RS26430	SM00382	ATPases associated with a variety of cellular activities
BB341_RS26430	SM00710	Parallel beta-helix repeats
BB341_RS26430	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BB341_RS26485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS26485	SM00091	PAS domain
BB341_RS26485	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS26525	SM00872	Alpha mannosidase, middle domain
BB341_RS26600	SM01120	BB341_RS26600
BB341_RS26640	SM00382	ATPases associated with a variety of cellular activities
BB341_RS26665	SM00346	helix_turn_helix isocitrate lyase regulation
BB341_RS26670	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS26675	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB341_RS26695	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB341_RS26700	SM00421	helix_turn_helix, Lux Regulon
BB341_RS26745	SM00421	helix_turn_helix, Lux Regulon
BB341_RS26745	SM00448	cheY-homologous receiver domain
BB341_RS26750	SM00100	Cyclic nucleotide-monophosphate binding domain
BB341_RS26755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB341_RS26765	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS26770	SM00481	DNA polymerase alpha chain like domain
BB341_RS26815	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS26865	SM00354	helix_turn _helix lactose operon repressor
BB341_RS26880	SM00421	helix_turn_helix, Lux Regulon
BB341_RS26905	SM00220	Serine/Threonine protein kinases, catalytic domain
BB341_RS26975	SM00644	BB341_RS26975
BB341_RS26990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BB341_RS26990	SM00331	Sigma factor PP2C-like phosphatases
BB341_RS26995	SM01006	Siderophore biosynthesis protein domain
BB341_RS27030	SM00062	Bacterial periplasmic substrate-binding proteins
BB341_RS27040	SM00382	ATPases associated with a variety of cellular activities
BB341_RS27130	SM00923	MbtH-like protein
BB341_RS27160	SM00849	Metallo-beta-lactamase superfamily
BB341_RS27205	SM00028	Tetratricopeptide repeats
BB341_RS27205	SM00530	Helix-turn-helix XRE-family like proteins 
BB341_RS27295	SM00947	Carbonic anhydrase
BB341_RS27320	SM00421	helix_turn_helix, Lux Regulon
BB341_RS27340	SM00450	Rhodanese Homology Domain
BB341_RS27370	SM00495	Chitin-binding domain type 3
BB341_RS27370	SM00636	BB341_RS27370
BB341_RS27375	SM00382	ATPases associated with a variety of cellular activities
BB341_RS27420	SM00342	helix_turn_helix, arabinose operon control protein
BB341_RS27445	SM00382	ATPases associated with a variety of cellular activities
BB341_RS27455	SM00382	ATPases associated with a variety of cellular activities
BB341_RS27515	SM00257	Lysin motif
BB341_RS27560	SM01043	Bacterial transcriptional activator domain
BB341_RS27610	SM01022	BB341_RS27610
BB341_RS27660	SM00822	BB341_RS27660
BB341_RS27660	SM00823	Phosphopantetheine attachment site
BB341_RS27660	SM00826	BB341_RS27660
BB341_RS27660	SM01294	BB341_RS27660
BB341_RS27665	SM00822	BB341_RS27665
BB341_RS27665	SM00823	Phosphopantetheine attachment site
BB341_RS27665	SM00824	Thioesterase
BB341_RS27665	SM00825	Beta-ketoacyl synthase
BB341_RS27665	SM00826	BB341_RS27665
BB341_RS27665	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB341_RS27705	SM00458	Ricin-type beta-trefoil
BB341_RS28295	SM00825	Beta-ketoacyl synthase
BB341_RS29540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB341_RS29540	SM00388	His Kinase A (phosphoacceptor) domain
BB341_RS29705	SM01232	BB341_RS29705
BB341_RS29950	SM00823	Phosphopantetheine attachment site
